Citrus Sinensis ID: 023337

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECAFNI
ccccHHHHHHHHHHHHHHccccccccccccccccccccEEEEccccEEEEEEcccccccEEEccEEEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEcccccccccEEEEEEEEccccccEEEEEEccccccccEEEEEEEcccEEEEEEccEEEEEEEcccccccccccccccEEEEEEEccccccccccEEEEccccccEEEEEEEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHccEEEEcccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEEEccEcccccEEEEEEEEccEccccEEEEccccHHHccEEEEEEEEccEEEEEEccccEEEEcccHHcccccccccccEEEEEccccccHHHccccEEcccccccEEEEEcccccccEEEcccccccccccccccHcccccHHHHHHHHHHHHccEEEEcccccccccccccccccccc
MAYSKNFTLLISIAISSLMVASasnfyqdfditwgdgrgkilnngQLLSLSldkasgsgfqskseylfgkidmqlklvpgnsagtVTAYYlkspgstwdeidfeflgnlsgdpytlhtnvftngkgdreqqfhlwfdptadfhtysvlwnpqrivfyvdgspirefknlesngvlfpknqpmriysslwnaddwatrggliktdwtqapftasyrnfnanacvwsngksscnsknnnpwfsqELDATGQERLKWVQKNYMIYNyckdskrfpqglpkecafni
MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNlesngvlfpknQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFSQELDATGQERLKWVQKNYMIYNYCKdskrfpqglPKECAFNI
MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWsngksscnsknnnPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECAFNI
*****NFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLD*********KSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGK*********PWFSQELDATGQERLKWVQKNYMIYNYCKDS***************
***SKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKS****************ATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECAFN*
MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECAFNI
*AYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC******PWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECAFNI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query283 2.2.26 [Sep-21-2011]
Q38910286 Probable xyloglucan endot yes no 0.985 0.975 0.742 1e-128
Q38857284 Xyloglucan endotransgluco no no 0.975 0.971 0.721 1e-125
Q38907284 Probable xyloglucan endot no no 0.961 0.957 0.724 1e-121
P24806269 Xyloglucan endotransgluco no no 0.911 0.959 0.722 1e-117
Q9FI31282 Xyloglucan endotransgluco no no 0.954 0.957 0.677 1e-113
Q9ZV40305 Probable xyloglucan endot no no 0.989 0.918 0.632 1e-109
P35694283 Brassinosteroid-regulated no no 0.943 0.943 0.686 1e-108
Q38911289 Probable xyloglucan endot no no 0.943 0.923 0.658 1e-105
Q8LG58291 Probable xyloglucan endot no no 0.985 0.958 0.632 1e-105
Q9M0D1277 Probable xyloglucan endot no no 0.968 0.989 0.665 1e-105
>sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1 Back     alignment and function desciption
 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 210/283 (74%), Positives = 245/283 (86%), Gaps = 4/283 (1%)

Query: 1   MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGF 60
           MA     T+++++  S ++ + ++NF +D +ITWGDGRG+I NNG LL+LSLDKASGSGF
Sbjct: 1   MAMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGF 60

Query: 61  QSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNV 120
           QSK+EYLFGKIDMQ+KLV GNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNV
Sbjct: 61  QSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNV 120

Query: 121 FTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQ 180
           FT GKGDREQQF LWFDPT+DFHTYS+LWNPQRI+F VDG+PIREFKN+ES G LFPKNQ
Sbjct: 121 FTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQ 180

Query: 181 PMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC----NSKNN 236
           PMR+YSSLWNA++WATRGGL+KTDW++APFTASYR FN  ACV  NG+SSC       + 
Sbjct: 181 PMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGST 240

Query: 237 NPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 279
             W SQELD+TGQE+++WVQ NYMIYNYC D+KRFPQGLP+EC
Sbjct: 241 GSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q38857|XTH22_ARATH Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 Back     alignment and function description
>sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 Back     alignment and function description
>sp|P24806|XTH24_ARATH Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2 Back     alignment and function description
>sp|Q9FI31|XTH20_ARATH Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZV40|XTH21_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 Back     alignment and function description
>sp|P35694|BRU1_SOYBN Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q38911|XTH15_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 Back     alignment and function description
>sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 Back     alignment and function description
>sp|Q9M0D1|XTH19_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
357479713283 Xyloglucan endotransglucosylase/hydrolas 0.982 0.982 0.811 1e-133
255570541284 Xyloglucan endotransglucosylase/hydrolas 0.964 0.961 0.801 1e-131
449457147291 PREDICTED: probable xyloglucan endotrans 0.985 0.958 0.777 1e-129
357510001282 Xyloglucan endotransglucosylase/hydrolas 0.978 0.982 0.800 1e-129
449457143283 PREDICTED: probable xyloglucan endotrans 0.961 0.961 0.797 1e-129
449500247291 PREDICTED: LOW QUALITY PROTEIN: probable 0.985 0.958 0.777 1e-129
359484996297 PREDICTED: probable xyloglucan endotrans 0.961 0.915 0.794 1e-128
356547513285 PREDICTED: probable xyloglucan endotrans 0.982 0.975 0.798 1e-128
449517329283 PREDICTED: probable xyloglucan endotrans 0.961 0.961 0.793 1e-128
401466646285 xyloglucan endotransglycosylase/hydrolas 0.950 0.943 0.787 1e-128
>gi|357479713|ref|XP_003610142.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] gi|355511197|gb|AES92339.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] Back     alignment and taxonomy information
 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/281 (81%), Positives = 254/281 (90%), Gaps = 3/281 (1%)

Query: 1   MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGF 60
           MA+SK  T L+ I IS++ +ASA NFYQDFDITWGDGR KILN+GQLL+LSLDK+SGSGF
Sbjct: 1   MAFSKFVTFLV-IFISTVAIASAGNFYQDFDITWGDGRAKILNSGQLLTLSLDKSSGSGF 59

Query: 61  QSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNV 120
           QSK+EYLFGKIDMQLKLVPGNSAGTVTAYYL S G  WDEIDFEFLGNLSGDPY LHTNV
Sbjct: 60  QSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSKGGAWDEIDFEFLGNLSGDPYILHTNV 119

Query: 121 FTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQ 180
           F+ GKGDREQQ +LWFDPTADFHTYS+LWNPQRIVF VDG+PIREFKN+ES+GV FPKNQ
Sbjct: 120 FSQGKGDREQQIYLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNIESSGVPFPKNQ 179

Query: 181 PMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNS--KNNNP 238
           PMRIYSSLWNADDWATRGGL+KTDW++APFTASYR+FNANAC+ S+G SSC+S   N N 
Sbjct: 180 PMRIYSSLWNADDWATRGGLVKTDWSKAPFTASYRHFNANACIVSSGISSCDSAQSNKND 239

Query: 239 WFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 279
           WFS+ELD+T  ERLKWVQKNYMIYNYC D+KRFPQGLP+EC
Sbjct: 240 WFSEELDSTSYERLKWVQKNYMIYNYCSDNKRFPQGLPQEC 280

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255570541|ref|XP_002526228.1| Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative [Ricinus communis] gi|223534467|gb|EEF36169.1| Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449457147|ref|XP_004146310.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Cucumis sativus] gi|29500893|emb|CAD87536.1| putative xyloglucan endotransglycosylase [Cucumis sativus] gi|29500901|emb|CAD87534.1| putative xyloglucan endotransglycosylase [Cucumis sativus] Back     alignment and taxonomy information
>gi|357510001|ref|XP_003625289.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] gi|355500304|gb|AES81507.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] gi|388522479|gb|AFK49301.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449457143|ref|XP_004146308.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like isoform 2 [Cucumis sativus] gi|29500891|emb|CAD87535.1| putative xyloglucan endotransglycosylase [Cucumis sativus] gi|29500899|emb|CAD87533.1| putative xyloglucan endotransglycosylase [Cucumis sativus] Back     alignment and taxonomy information
>gi|449500247|ref|XP_004161046.1| PREDICTED: LOW QUALITY PROTEIN: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359484996|ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356547513|ref|XP_003542156.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Glycine max] Back     alignment and taxonomy information
>gi|449517329|ref|XP_004165698.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|401466646|gb|AFP93557.1| xyloglucan endotransglycosylase/hydrolase 1 [Neolamarckia cadamba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
TAIR|locus:2117567286 XTR6 "xyloglucan endotransglyc 0.982 0.972 0.732 1.3e-116
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.961 0.957 0.708 5.2e-113
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.957 0.954 0.709 7.8e-110
TAIR|locus:2128936269 XTH24 "xyloglucan endotransglu 0.908 0.955 0.714 6.3e-108
TAIR|locus:2053967305 XTH21 "xyloglucan endotransglu 0.961 0.891 0.637 1.8e-103
TAIR|locus:2162652282 XTH20 "xyloglucan endotransglu 0.904 0.907 0.675 2.6e-102
TAIR|locus:2118751277 XTH19 "xyloglucan endotransglu 0.968 0.989 0.643 3.8e-101
TAIR|locus:2206335282 XTH17 "xyloglucan endotransglu 0.954 0.957 0.653 1e-100
TAIR|locus:2118746282 XTH18 "xyloglucan endotransglu 0.957 0.960 0.64 5.6e-100
TAIR|locus:2174572285 XTH12 "xyloglucan endotransglu 0.971 0.964 0.637 2.8e-98
TAIR|locus:2117567 XTR6 "xyloglucan endotransglycosylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
 Identities = 208/284 (73%), Positives = 239/284 (84%)

Query:     1 MAYSKNFTLLISIAISSLMVASAS-NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSG 59
             MA     T+++++ ++S M+ S S NF +D +ITWGDGRG+I NNG LL+LSLDKASGSG
Sbjct:     1 MAMISYSTIVVAL-LASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSG 59

Query:    60 FQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTN 119
             FQSK+EYLFGKIDMQ+KLV GNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTN
Sbjct:    60 FQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTN 119

Query:   120 VFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKN 179
             VFT GKGDREQQF LWFDPT+DFHTYS+LWNPQRI+F VDG+PIREFKN+ES G LFPKN
Sbjct:   120 VFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKN 179

Query:   180 QPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXX----XXXXX 235
             QPMR+YSSLWNA++WATRGGL+KTDW++APFTASYR FN  ACV                
Sbjct:   180 QPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGS 239

Query:   236 XXPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 279
                W SQELD+TGQE+++WVQ NYMIYNYC D+KRFPQGLP+EC
Sbjct:   240 TGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128936 XTH24 "xyloglucan endotransglucosylase/hydrolase 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053967 XTH21 "xyloglucan endotransglucosylase/hydrolase 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162652 XTH20 "xyloglucan endotransglucosylase/hydrolase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118751 XTH19 "xyloglucan endotransglucosylase/hydrolase 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206335 XTH17 "xyloglucan endotransglucosylase/hydrolase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118746 XTH18 "xyloglucan endotransglucosylase/hydrolase 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174572 XTH12 "xyloglucan endotransglucosylase/hydrolase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q41638XTHA_PHAAN2, ., 4, ., 1, ., 2, 0, 70.53900.96110.9315N/Ano
Q38910XTH23_ARATH2, ., 4, ., 1, ., 2, 0, 70.74200.98580.9755yesno
Q6YDN9XTH_BRAOB2, ., 4, ., 1, ., 2, 0, 70.55250.89390.8576N/Ano
Q38907XTH25_ARATH2, ., 4, ., 1, ., 2, 0, 70.72460.96110.9577nono
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.56150.89750.8610N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.54080.89390.8634N/Ano
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.53840.89750.8581N/Ano
P24806XTH24_ARATH2, ., 4, ., 1, ., 2, 0, 70.72260.91160.9591nono
Q8LNZ5XTHB_PHAAN2, ., 4, ., 1, ., 2, 0, 70.53020.96460.9317N/Ano
Q38857XTH22_ARATH2, ., 4, ., 1, ., 2, 0, 70.72180.97520.9718nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.2070.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-157
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-114
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 3e-82
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 7e-29
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 4e-26
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 1e-23
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 7e-23
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 1e-12
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 5e-11
cd02177269 cd02177, GH16_kappa_carrageenase, Kappa-carrageena 3e-04
cd08024330 cd08024, GH16_CCF, Coelomic cytolytic factor, memb 0.001
cd02178258 cd02178, GH16_beta_agarase, Beta-agarase, member o 0.002
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  437 bits (1125), Expect = e-157
 Identities = 144/264 (54%), Positives = 192/264 (72%), Gaps = 6/264 (2%)

Query: 21  ASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPG 80
           A A++F ++F +TWG    ++ N+G  + L+LD++SGSGF+SK++YLFG   M++KL PG
Sbjct: 1   AVAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPG 60

Query: 81  NSAGTVTAYYLKSPGSTW-DEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPT 139
           +SAGTVTA+YL S G    DEIDFEFLGN++G PYTL TNVF NG G REQ+ +LWFDPT
Sbjct: 61  DSAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPT 120

Query: 140 ADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGG 199
           ADFHTYS+LWNP +IVFYVD  PIR FKN E+ GV +P +QPM +Y+S+W+  DWAT+GG
Sbjct: 121 ADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGG 180

Query: 200 LIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFS----QELDATGQERLKWV 255
            +K DW+ APF ASYR+F  + CV   G S  +      W++    Q+L A  Q  ++WV
Sbjct: 181 RVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWV 240

Query: 256 QKNYMIYNYCKDSKRFPQGLPKEC 279
           ++NYM+Y+YC D KR+P   P EC
Sbjct: 241 RRNYMVYDYCDDRKRYP-VPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185686 cd02177, GH16_kappa_carrageenase, Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185694 cd08024, GH16_CCF, Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185687 cd02178, GH16_beta_agarase, Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 283
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.98
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.97
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.97
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.96
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.96
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.93
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.83
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.69
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.65
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 93.21
smart00560133 LamGL LamG-like jellyroll fold domain. 93.04
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 92.99
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 91.28
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 89.86
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 86.39
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 85.34
cd00152201 PTX Pentraxins are plasma proteins characterized b 80.83
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.2e-84  Score=587.31  Aligned_cols=261  Identities=54%  Similarity=1.053  Sum_probs=242.0

Q ss_pred             cccccccCCeeeecCCCeEEecCCcEEEEEEecCCCCeEEEccceEeEEEEEEEEecCCCCCceEEEEEecCCCCCcceE
Q 023337           22 SASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEI  101 (283)
Q Consensus        22 ~~~~f~~~f~~~w~~~nv~~~~~G~~l~l~~d~~sG~~i~Sk~~~~yG~~eariKlp~~~~~G~~~AFwl~~~~~~~~EI  101 (283)
                      ...+|.++|+.+|+.+|+.+.++|..|+|+||+.+|++|+||+.|+||+||+|||+|+++++|+||||||++.++.++||
T Consensus        23 ~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~saG~v~AFwl~s~~~~~dEI  102 (291)
T PLN03161         23 VEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSRHDEI  102 (291)
T ss_pred             ccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCCCeEEEEEecCCCCCCCeE
Confidence            45689999999999999999888888999999999999999999999999999999998889999999999976789999


Q ss_pred             EEEecCCCCCCceEEEeeeecCCCCCceeeEeecCCCCCCcEEEEEEEccCeEEEEeCCCeEEEEecccCCCccCCCCCC
Q 023337          102 DFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQP  181 (283)
Q Consensus       102 DiE~lg~~~g~~~~~~tNv~~~g~~~~~~~~~l~fd~~~dfHtY~i~Wtp~~I~fyVDg~~vr~~~~~~~~g~~~P~~~P  181 (283)
                      ||||+|+++++++++|||+|.+|.+++++++.++||++++||+|+|+|+|++|+|||||++||++++.+..+.+||+++|
T Consensus       103 DiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~iRt~~~~~~~g~~yP~~~p  182 (291)
T PLN03161        103 DFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYENEGIAYPNKQG  182 (291)
T ss_pred             EEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEEEEEEcccccCCcCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988777888999889


Q ss_pred             eEEEeecccCCccccCCCccccCCCCCCeEEEEeEEEEeEEeeCCCC--CcCCCCCCCCccc----cCCCHHHHHHHHHH
Q 023337          182 MRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGK--SSCNSKNNNPWFS----QELDATGQERLKWV  255 (283)
Q Consensus       182 m~l~lnlw~gg~Wat~gG~~~~d~~~~Pf~~~~~~~~~~~c~~~~~~--~~C~~~~~~~~~~----~~l~~~~~~~~~~~  255 (283)
                      |+|++|||+|++|||+||++|+||+++||+|.|++|++++|.++++.  ..|...+...||.    ++|+++|+++|+||
T Consensus       183 M~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~v  262 (291)
T PLN03161        183 MRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWWTSPSYSQLTNAQLTQMKKV  262 (291)
T ss_pred             eEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCccccccCccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987542  4797532345665    48999999999999


Q ss_pred             hhcCeEeccccCCCCCCCCCCCCccCC
Q 023337          256 QKNYMIYNYCKDSKRFPQGLPKECAFN  282 (283)
Q Consensus       256 ~~~~~~y~yc~d~~r~~~~~~~ec~~~  282 (283)
                      |+||||||||+|++|||+++||||.++
T Consensus       263 ~~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        263 RDNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             HhCcEEEeccCCCCcCCCCcCcccCCC
Confidence            999999999999999998789999765

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 6e-80
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 4e-47
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 5e-47
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 2e-45
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 4e-45
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 2e-16
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 2e-14
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 2e-14
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 1e-13
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 4e-13
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 4e-13
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 4e-13
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 5e-13
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 5e-13
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 4e-12
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 3e-11
3axd_A249 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 1e-09
3h0o_A240 The Importance Of Ch-Pi Stacking Interactions Betwe 1e-08
2r49_A241 Mutational And Structural Studies Of E85i Reveal Th 2e-08
3hr9_A241 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 3e-08
1mve_A243 Crystal Structure Of A Natural Circularly-Permutate 1e-07
1zm1_A241 Crystal Structures Of Complex F. Succinogenes 1,3-1 1e-07
1dyp_A271 1,3-Alpha-1,4-Beta-D-Galactose-4-Sulfate-3,6-Anhydr 6e-04
1ajo_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 7e-04
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  293 bits (751), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 150/271 (55%), Positives = 178/271 (65%), Gaps = 4/271 (1%)
Query: 12  SIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKI 71
           + A ++L       F +++  TW     K  N G  + L LDK +G+GFQSK  YLFG  
Sbjct: 3   TAAFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHF 62
Query: 72  DMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQ 131
            MQ+KLVPG+SAGTVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT GKGDREQ+
Sbjct: 63  SMQMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 122
Query: 132 FHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNA 191
            +LWFDPT +FH YSVLWN   IVF VD  PIR FKN +  GV FP NQPM+IYSSLWNA
Sbjct: 123 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 182
Query: 192 DDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXXPWFS---QELDATG 248
           DDWATRGGL KTDW++APF ASYR+F+ + C                W     Q+LDA  
Sbjct: 183 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 242
Query: 249 QERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 279
             RL WV++ Y IYNYC D  R+P  +P EC
Sbjct: 243 YRRLSWVRQKYTIYNYCTDRSRYP-SMPPEC 272
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form Length = 249 Back     alignment and structure
>pdb|3H0O|A Chain A, The Importance Of Ch-Pi Stacking Interactions Between Carbohydrate And Aromatic Residues In Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase Length = 240 Back     alignment and structure
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The Flexible Loops Of Fibrobacter Succinogenes 1,3-1,4-beta-d- Glucanaseglucanase Length = 241 Back     alignment and structure
>pdb|3HR9|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D- Glucanase F40i Mutant Length = 241 Back     alignment and structure
>pdb|1MVE|A Chain A, Crystal Structure Of A Natural Circularly-Permutated Jellyroll Protein: 1,3-1,4-Beta-D-Glucanase From Fibrobacter Succinogenes Length = 243 Back     alignment and structure
>pdb|1ZM1|A Chain A, Crystal Structures Of Complex F. Succinogenes 1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose Length = 241 Back     alignment and structure
>pdb|1DYP|A Chain A, 1,3-Alpha-1,4-Beta-D-Galactose-4-Sulfate-3,6-Anhydro-D- Galactose 4 Galactohydrolase Length = 271 Back     alignment and structure
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-127 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-121
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 1e-106
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 2e-70
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 6e-70
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 1e-67
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1e-64
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 4e-61
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 6e-58
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 2e-54
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 5e-24
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 2e-16
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 1e-11
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 4e-11
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 3e-10
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 6e-10
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 6e-10
3rq0_A269 Glycosyl hydrolases family protein 16; structural 8e-10
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 8e-10
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 9e-10
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 3e-09
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 1e-08
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 4e-08
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 7e-08
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 1e-06
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 1e-04
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 4e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  347 bits (891), Expect = e-121
 Identities = 152/274 (55%), Positives = 183/274 (66%), Gaps = 4/274 (1%)

Query: 12  SIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKI 71
           + A ++L       F +++  TW     K  N G  + L LDK +G+GFQSK  YLFG  
Sbjct: 3   TAAFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHF 62

Query: 72  DMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQ 131
            MQ+KLVPG+SAGTVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT GKGDREQ+
Sbjct: 63  SMQMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 122

Query: 132 FHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNA 191
            +LWFDPT +FH YSVLWN   IVF VD  PIR FKN +  GV FP NQPM+IYSSLWNA
Sbjct: 123 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 182

Query: 192 DDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPW---FSQELDATG 248
           DDWATRGGL KTDW++APF ASYR+F+ + C  S     C ++    W     Q+LDA  
Sbjct: 183 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 242

Query: 249 QERLKWVQKNYMIYNYCKDSKRFPQGLPKECAFN 282
             RL WV++ Y IYNYC D  R+P  +P EC  +
Sbjct: 243 YRRLSWVRQKYTIYNYCTDRSRYPS-MPPECKRD 275
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Length = 308 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Length = 346 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.98
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.95
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.95
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.85
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.77
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 97.2
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 93.94
3hbk_A245 Putative glycosyl hydrolase; YP_001302580.1, WAS d 89.18
4dqa_A355 Uncharacterized protein; two domains structure, DU 88.89
3pvn_A206 C-reactive protein; pentraxin family, immune syste 86.58
3u1x_A236 Putative glycosyl hydrolase; glycosyl hydrolysis, 86.02
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 83.24
3s5q_A214 Putative glycosylhydrolase; concanavalin A-like le 81.15
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-78  Score=549.21  Aligned_cols=261  Identities=57%  Similarity=1.023  Sum_probs=241.3

Q ss_pred             hccccccccCCeeeecCCCeEEecCCcEEEEEEecCCCCeEEEccceEeEEEEEEEEecCCCCCceEEEEEecCCCCCcc
Q 023337           20 VASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWD   99 (283)
Q Consensus        20 ~~~~~~f~~~f~~~w~~~nv~~~~~G~~l~l~~d~~sG~~i~Sk~~~~yG~~eariKlp~~~~~G~~~AFwl~~~~~~~~   99 (283)
                      ...+.+|.++|+++|+++||++.++|+.|+|++++++|++|+||+.|+||+||||||+|+++++|+||||||++++|.++
T Consensus        11 ~~~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~g   90 (278)
T 1umz_A           11 KPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHD   90 (278)
T ss_dssp             -CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCC
T ss_pred             cccCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCC
Confidence            45678999999999999999998889889999999999999999999999999999999987789999999999888999


Q ss_pred             eEEEEecCCCCCCceEEEeeeecCCCCCceeeEeecCCCCCCcEEEEEEEccCeEEEEeCCCeEEEEecccCCCccCCCC
Q 023337          100 EIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKN  179 (283)
Q Consensus       100 EIDiE~lg~~~g~~~~~~tNv~~~g~~~~~~~~~l~fd~~~dfHtY~i~Wtp~~I~fyVDg~~vr~~~~~~~~g~~~P~~  179 (283)
                      |||||++|+++++++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++++++++.+..+.+||++
T Consensus        91 EIDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~  170 (278)
T 1umz_A           91 EIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFN  170 (278)
T ss_dssp             EEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCS
T ss_pred             eEEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCC
Confidence            99999999998889999999999999999989999999999999999999999999999999999999877667789977


Q ss_pred             CCeEEEeecccCCccccCCCccccCCCCCCeEEEEeEEEEeEEeeCCCCCcCCCCCCCCcccc----CCCHHHHHHHHHH
Q 023337          180 QPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFSQ----ELDATGQERLKWV  255 (283)
Q Consensus       180 ~Pm~l~lnlw~gg~Wat~gG~~~~d~~~~Pf~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~~~----~l~~~~~~~~~~~  255 (283)
                      +||+|+||||+||+|+++||++++||+++||+++|+.+++++|.++.+.+.|.. ....||++    +|+++|+++|+||
T Consensus       171 ~P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~-~~~~~~~~~~~~~l~~~~~~~~~~~  249 (278)
T 1umz_A          171 QPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCAT-QGARWWDQKEFQDLDAFQYRRLSWV  249 (278)
T ss_dssp             SCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTT-TTCSGGGSGGGSSCCHHHHHHHHHH
T ss_pred             CceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCC-CcccccccCccccCCHHHHHHHHHH
Confidence            999999999999999999998899999999999999999999998654456975 33457764    8999999999999


Q ss_pred             hhcCeEeccccCCCCCCCCCCCCccCC
Q 023337          256 QKNYMIYNYCKDSKRFPQGLPKECAFN  282 (283)
Q Consensus       256 ~~~~~~y~yc~d~~r~~~~~~~ec~~~  282 (283)
                      |+||||||||+|++|||+ +||||.++
T Consensus       250 ~~~~~~y~yc~d~~r~~~-~~~ec~~~  275 (278)
T 1umz_A          250 RQKYTIYNYCTDRSRYPS-MPPECKRD  275 (278)
T ss_dssp             HHHTEEEEGGGCTTTCSS-CCTHHHHH
T ss_pred             HHCCeEEecCCCCCcCCC-CCcccCCC
Confidence            999999999999999998 89999643
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 283
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-112
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 2e-51
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 7e-24
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 8e-23
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 7e-11
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 3e-07
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 8e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  323 bits (829), Expect = e-112
 Identities = 150/261 (57%), Positives = 178/261 (68%), Gaps = 4/261 (1%)

Query: 25  NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAG 84
            F +++  TW     K  N G  + L LDK +G+GFQSK  YLFG   MQ+KLVPG+SAG
Sbjct: 5   AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 64

Query: 85  TVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHT 144
           TVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT +FH 
Sbjct: 65  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 124

Query: 145 YSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTD 204
           YSVLWN   IVF VD  PIR FKN +  GV FP NQPM+IYSSLWNADDWATRGGL KTD
Sbjct: 125 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 184

Query: 205 WTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFS---QELDATGQERLKWVQKNYMI 261
           W++APF ASYR+F+ + C  S     C ++    W     Q+LDA    RL WV++ Y I
Sbjct: 185 WSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTI 244

Query: 262 YNYCKDSKRFPQGLPKECAFN 282
           YNYC D  R+P  +P EC  +
Sbjct: 245 YNYCTDRSRYP-SMPPECKRD 264
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.97
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.97
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.96
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 94.81
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 94.28
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 93.71
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 93.37
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 91.9
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 91.78
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 90.39
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 87.39
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 86.72
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 83.37
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 82.59
d2r1da1177 Ligand-binding domain of neurexin 1beta {Rat (Ratt 81.55
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=7.7e-79  Score=549.95  Aligned_cols=258  Identities=58%  Similarity=1.039  Sum_probs=242.0

Q ss_pred             ccccccCCeeeecCCCeEEecCCcEEEEEEecCCCCeEEEccceEeEEEEEEEEecCCCCCceEEEEEecCCCCCcceEE
Q 023337           23 ASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEID  102 (283)
Q Consensus        23 ~~~f~~~f~~~w~~~nv~~~~~G~~l~l~~d~~sG~~i~Sk~~~~yG~~eariKlp~~~~~G~~~AFwl~~~~~~~~EID  102 (283)
                      ..+|.++|..+|+++||++.++|..|+|++|+.+|++|+||+.|+||+||||||+|+++++|++++||++++++.++|||
T Consensus         3 ~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEID   82 (267)
T d1umza_           3 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   82 (267)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             cccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeEE
Confidence            45899999999999999999999999999999999999999999999999999999998889999999999989999999


Q ss_pred             EEecCCCCCCceEEEeeeecCCCCCceeeEeecCCCCCCcEEEEEEEccCeEEEEeCCCeEEEEecccCCCccCCCCCCe
Q 023337          103 FEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPM  182 (283)
Q Consensus       103 iE~lg~~~g~~~~~~tNv~~~g~~~~~~~~~l~fd~~~dfHtY~i~Wtp~~I~fyVDg~~vr~~~~~~~~g~~~P~~~Pm  182 (283)
                      ||++|++.++++++|||+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.+||.++||
T Consensus        83 iE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm  162 (267)
T d1umza_          83 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  162 (267)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888999988999


Q ss_pred             EEEeecccCCccccCCCccccCCCCCCeEEEEeEEEEeEEeeCCCCCcCCCCCCCCccc----cCCCHHHHHHHHHHhhc
Q 023337          183 RIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSCNSKNNNPWFS----QELDATGQERLKWVQKN  258 (283)
Q Consensus       183 ~l~lnlw~gg~Wat~gG~~~~d~~~~Pf~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~~----~~l~~~~~~~~~~~~~~  258 (283)
                      +|++|||+||+|||+||+.++||+.+||+|.|++|+|++|.++...+.|... ...|++    +.|+.+|+++|+|||+|
T Consensus       163 ~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~  241 (267)
T d1umza_         163 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQ-GARWWDQKEFQDLDAFQYRRLSWVRQK  241 (267)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTT-TCSGGGSGGGSSCCHHHHHHHHHHHHH
T ss_pred             EEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCC-CCccccccccccCCHHHHHHHHHHHHC
Confidence            9999999999999999999999999999999999999999988776666553 344555    47999999999999999


Q ss_pred             CeEeccccCCCCCCCCCCCCccCC
Q 023337          259 YMIYNYCKDSKRFPQGLPKECAFN  282 (283)
Q Consensus       259 ~~~y~yc~d~~r~~~~~~~ec~~~  282 (283)
                      |||||||.|++|||+ +||||.+|
T Consensus       242 ~~~y~yC~d~~r~~~-~p~EC~~~  264 (267)
T d1umza_         242 YTIYNYCTDRSRYPS-MPPECKRD  264 (267)
T ss_dssp             TEEEEGGGCTTTCSS-CCTHHHHH
T ss_pred             CcEEccCCCCCcCCC-CCcccCCC
Confidence            999999999999996 89999753
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure