Citrus Sinensis ID: 023361

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
Protein Sequence
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHEEEEEEEccccccccccccccccHHHccccccccccccc
Coil and Loop (DISEMBL)
mavelmgfpkrmmEDQTAIQEAATQGIKSMEHLIRLMShhqssnhvdcsdltdltVSKFKKVISLLNRtgharfrrgpvhsspssssasapaaaasgnsphtqtltltppaptmavapstasyvqsqphsltldftkpslfsgnvkstelefskdsfcvssnssfmssaitgdgsvsngkqggssiflapqapavsagkpplaaqpykkrcqdhkdhsddlsgkfsgstsgnnkchcskrrknrvkktirvpaisskiadippdeyswrkygqkpikgspypr
Flexible Loop (DISEMBL)
mavelmgfpkrmmEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLnrtgharfrrgpvhsspssSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDlsgkfsgstsgnnkchcskrrknrvkktirvpaisskiadippdeyswrkygqkpikgspypr
Low Complexity Region (SEG)
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHsspssssasapaaaasGNSPHtqtltltppaptmavapstaSYVQSQPHSLTLDFTKPSLFSGNVKSTELEfskdsfcvssnssfmssAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR
Disordered region (IsUnstruct)
********************************LIRL********HVDCSDLTDLTVSKFKKVISLLNRTG*********************************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
MAVEL**FPKR*********EAATQGIKSMEHL*******************DLTVSKFKKV******************************************************************************************************************************************************************************************************IPPDEYSWRKYGQKP********
Disordered Region (DISEMBL)
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFR***************************QTLTLTPPAPTMA*************HSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPA***************************************************KKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR
Disordered Region (DISPRO)
***ELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRR**************************************************************************************************************************************************************CHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIK******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	283	2.2.26 [Sep-21-2011]
Q9SV15	325	Probable WRKY transcripti	yes	no	0.929	0.809	0.618	3e-91
Q9SJA8	321	Probable WRKY transcripti	no	no	0.915	0.806	0.623	1e-83
Q9SR07	330	Probable WRKY transcripti	no	no	0.901	0.772	0.339	2e-24
Q9STX0	353	Probable WRKY transcripti	no	no	0.367	0.294	0.488	5e-24
O04336	380	Probable WRKY transcripti	no	no	0.392	0.292	0.504	1e-22
Q93WU6	330	Probable WRKY transcripti	no	no	0.872	0.748	0.313	3e-22
Q32SG4	397	Protein WRKY1 OS=Zea mays	N/A	no	0.240	0.171	0.539	1e-19
O22176	317	Probable WRKY transcripti	no	no	0.219	0.195	0.650	2e-19
O64747	427	Probable WRKY transcripti	no	no	0.159	0.105	0.54	8e-08
Q9SA80	430	Probable WRKY transcripti	no	no	0.159	0.104	0.52	5e-07

>sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2

 Score =  334 bits (857), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 209/286 (73%), Gaps = 23/286 (8%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            K RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 221 KKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 266

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=2 SV=2

 Score =  310 bits (793), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 179/287 (62%), Positives = 215/287 (74%), Gaps = 28/287 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           M V++M  PK  MEDQTAIQEAA+QG+KSMEHLIR++S+     +VDCS++TD TVSKFK
Sbjct: 1   MTVDIMRLPK--MEDQTAIQEAASQGLKSMEHLIRVLSNRPEERNVDCSEITDFTVSKFK 58

Query: 61  KVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPST 120
           KVISLLNR+GHARFRRG                 +  +S     + +T PAPT   AP+ 
Sbjct: 59  KVISLLNRSGHARFRRG--------------PVHSPPSSSVPPPVKVTTPAPTQISAPAP 104

Query: 121 ASYVQSQPHSLTLDFTKPSLFSGNVKSTE-LEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
            S+VQ+   S+TLDFT+PS+F    KS+E +EF+K+SF VSSNSSFMSSAITGDGSVS  
Sbjct: 105 VSFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSK- 163

Query: 180 KQGGSSIFLAPQAPAV---SAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCH 236
              GSSIFLAP APAV   S+GKPPL+  PY+KRC +H DHS+  SGK SG  SGN KCH
Sbjct: 164 ---GSSIFLAP-APAVPVTSSGKPPLSGLPYRKRCFEH-DHSEGFSGKISG--SGNGKCH 216

Query: 237 CSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           C K RKNR+K+T+RVPA+S+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 217 CKKSRKNRMKRTVRVPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPR 263

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SR07|WRK39_ARATH Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=2 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 144/289 (49%), Gaps = 34/289 (11%)

Query: 19  IQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNR-TGHARFRRG 77
           ++ A    I+S   ++ L+S  ++S+    +  T   VSKFK+V SLL R  GH +FR  
Sbjct: 4   VEAANRSAIESCHGVLNLLSQ-RTSDPKSLTVETGEVVSKFKRVASLLTRGLGHGKFRST 62

Query: 78  PVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQP-HSLTLDFT 136
               S         +    GN        +  P P + + P++A Y + +P H L     
Sbjct: 63  NKFRSSFPQHIFLESPICCGNDLSGDYTQVLAPEP-LQMVPASAVYNEMEPKHQLG---- 117

Query: 137 KPSLFSGN---VKSTELEFS----KDSFCVSSNSSFMSSAITGDGSVSNGKQGGSSIFLA 189
            PSL   +   V  + LE      +  + +  N   ++ + +  G        GSS +  
Sbjct: 118 HPSLMLSHKMCVDKSFLELKPPPFRAPYQLIHNHQQIAYSRSNSGVNLKFDGSGSSCY-- 175

Query: 190 PQAPAVSAG-KPPLAAQPYKKRCQDHKDHSDDLSGKFSGS--------TSGN------NK 234
              P+VS G +  +++        D+  +S  L+G   GS         SG+      +K
Sbjct: 176 --TPSVSNGSRSFVSSLSMDASVTDYDRNSFHLTGLSRGSDQQHTRKMCSGSLKCGSRSK 233

Query: 235 CHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           CHCSK+RK RVK++I+VPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 234 CHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPR 282

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1

 Score =  111 bits (278), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 23/127 (18%)

Query: 159 VSSNSSFMSS--AITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKD 216
           VS+ +SFMSS    T    +S+G +     F  P   + S GKPPL++   K+RC     
Sbjct: 196 VSATNSFMSSHRCDTDSTHMSSGFE-----FTNPSQLSGSRGKPPLSSASLKRRC----- 245

Query: 217 HSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPI 276
                      ++S +++CHCSK+RK+RVK+ IRVPA+SSK+ADIP DE+SWRKYGQKPI
Sbjct: 246 -----------NSSPSSRCHCSKKRKSRVKRVIRVPAVSSKMADIPSDEFSWRKYGQKPI 294

Query: 277 KGSPYPR 283
           KGSP+PR
Sbjct: 295 KGSPHPR 301

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 14/125 (11%)

Query: 159 VSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHS 218
           +SS  SF+SS ++ DGSV+N +   S  F  P     S  +  L +   K++C    D  
Sbjct: 223 MSSTRSFVSS-LSIDGSVANIEGKNSFHFGVPS----STDQNSLHS---KRKCPLKGDEH 274

Query: 219 DDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKG 278
             L     GS+S   +CHC+K+RK+RV+++IRVPAIS+K+ADIPPD+YSWRKYGQKPIKG
Sbjct: 275 GSLK---CGSSS---RCHCAKKRKHRVRRSIRVPAISNKVADIPPDDYSWRKYGQKPIKG 328

Query: 279 SPYPR 283
           SPYPR
Sbjct: 329 SPYPR 333

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WU6|WRK74_ARATH Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=2

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 144/306 (47%), Gaps = 59/306 (19%)

Query: 13  MEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNR-TGH 71
           ME+  A  +AA +    + +L+   ++   S  V+    T   V KFK+V SLL+R  G 
Sbjct: 1   MEEVEAANKAAVESCHGVLNLLSQQTNDSKSIMVE----TREAVCKFKRVSSLLSRGLGQ 56

Query: 72  ARFRRGPVHSSPSSSSA-------SAPAA---AASGNSPHT--QTLTLTPPAP------- 112
            + ++   ++   SSS         +P     A SG  P    + L + P  P       
Sbjct: 57  RKIKKLNNNNYKFSSSLLPQHMFLESPVCSNNAISGCIPILAPKPLQIVPAGPPPLMLFN 116

Query: 113 --------TMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEF--SKDSFC---- 158
                    + + P ++  V  +P+   +   +  ++S +     L+F  S  + C    
Sbjct: 117 QNMCLDKSFLELKPPSSRAVDPKPYQF-IHTHQQGVYSRSKSGLNLKFDGSIGASCYSPS 175

Query: 159 VSSNSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDH-KDH 217
           +S+ S    S+++ DGSV++  +    +   PQ                     DH   H
Sbjct: 176 ISNGSRSFVSSLSMDGSVTDYDRNSFHLIGLPQG-------------------SDHISQH 216

Query: 218 SDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIK 277
           S   S   S      +KCHCSK+RK RVK++I+VPAIS+KIADIPPDEYSWRKYGQKPIK
Sbjct: 217 SRRTSCSGSLKCGSKSKCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIK 276

Query: 278 GSPYPR 283
           GSP+PR
Sbjct: 277 GSPHPR 282

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1

 Score = 97.1 bits (240), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 8/76 (10%)

Query: 208 KKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYS 267
           ++RC   +D +        G  +  ++CHCSK+RK R++++I+VPAIS+K+ADIP DE+S
Sbjct: 285 RRRCAGREDGT--------GRCATGSRCHCSKKRKLRIRRSIKVPAISNKVADIPADEFS 336

Query: 268 WRKYGQKPIKGSPYPR 283
           WRKYGQKPIKGSP+PR
Sbjct: 337 WRKYGQKPIKGSPHPR 352

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Zea mays (taxid: 4577)

>sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 221 LSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSP 280
           L+GK   S S + +CHCSK+RK + ++ IRVPAIS+K++D+PPD+YSWRKYGQKPIKGSP
Sbjct: 199 LTGK-CASASSSGRCHCSKKRKIKQRRIIRVPAISAKMSDVPPDDYSWRKYGQKPIKGSP 257

Query: 281 YPR 283
           +PR
Sbjct: 258 HPR 260

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O64747|WRK35_ARATH Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 5/50 (10%)

Query: 239 KRRKNRVKKTIRVPA---ISSKIAD--IPPDEYSWRKYGQKPIKGSPYPR 283
           KRRK++ KK + +PA   ++S+ +   +P D ++WRKYGQKPIKGSPYPR
Sbjct: 186 KRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPR 235

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA80|WRK14_ARATH Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2

 Score = 55.1 bits (131), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 5/50 (10%)

Query: 239 KRRKNRVKKTIRVPA---ISSKIAD--IPPDEYSWRKYGQKPIKGSPYPR 283
           KRRK++ KK + +PA   ++S+ +   +P D ++WRKYGQKPIKGSP+PR
Sbjct: 188 KRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPFPR 237

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	283
449437056	350	PREDICTED: probable WRKY transcription f	0.971	0.785	0.685	8e-98
302399127	341	WRKY domain class transcription factor [	0.957	0.794	0.661	2e-91
255548594	321	WRKY transcription factor, putative [Ric	0.918	0.809	0.728	1e-89
16604573	325	putative putaive DNA-binding protein [Ar	0.929	0.809	0.618	2e-89
30689072	325	putative WRKY transcription factor 11 [A	0.929	0.809	0.618	2e-89
21537078	324	putaive DNA-binding protein [Arabidopsis	0.929	0.811	0.618	2e-89
297798820	335	WRKY transcription factor 11 [Arabidopsi	0.946	0.8	0.621	6e-89
22329054	324	putative WRKY transcription factor 11 [A	0.925	0.808	0.618	2e-88
312282033	341	unnamed protein product [Thellungiella h	0.968	0.803	0.625	1e-87
45479880	334	WRKY transcription factor 11 [Capsella r	0.932	0.790	0.599	1e-85

>gi|449437056|ref|XP_004136308.1| PREDICTED: probable WRKY transcription factor 11-like [Cucumis sativus] gi|449525016|ref|XP_004169517.1| PREDICTED: probable WRKY transcription factor 11-like [Cucumis sativus] gi|315613822|gb|ADU52516.1| WRKY protein [Cucumis sativus]

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 205/299 (68%), Positives = 232/299 (77%), Gaps = 24/299 (8%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           MAV+LM FPK  M+DQ AIQEAA+QG+KSMEHLIRL+SH QSSNHVDCSDLTD TVSKFK
Sbjct: 1   MAVDLMSFPK--MDDQIAIQEAASQGLKSMEHLIRLLSHKQSSNHVDCSDLTDATVSKFK 58

Query: 61  KVISLLNRTGHARFRRGPV------------HSSPSSSSASAPAAAASGNSPHTQTLTLT 108
           KVISLLNRTGHARFRRGPV            H S + +    P    S   P+   L  T
Sbjct: 59  KVISLLNRTGHARFRRGPVSSTSSSSSGSSAHLSQNQAMTLTPTPFTS--PPNVPALPFT 116

Query: 109 PPA----PTMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSS 164
            PA    P   V  + A+++ SQP S+TLDFT+P++ + N K  +LEFSK++F VSS+SS
Sbjct: 117 APATVAQPQTKVVATAANFL-SQPQSMTLDFTRPNILNSNPKGADLEFSKETFSVSSSSS 175

Query: 165 FMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGK 224
           FMSSAITGDGSVSNGK G +SIFLAP AP  S GKPPL+A PYKKRC +H DHS+DLSGK
Sbjct: 176 FMSSAITGDGSVSNGKLG-TSIFLAP-APTASGGKPPLSAAPYKKRCHEH-DHSEDLSGK 232

Query: 225 FSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           FSGSTS + KCHCSKRRKNR+KKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR
Sbjct: 233 FSGSTSISGKCHCSKRRKNRMKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 291

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399127|gb|ADL36858.1| WRKY domain class transcription factor [Malus x domestica]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 201/304 (66%), Positives = 226/304 (74%), Gaps = 33/304 (10%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQS-----SNHVDCSDLTDLT 55
           M VELM FPK  MEDQ AIQEAA+QG++SMEHLIR +SH Q      S  +DC+D+TD T
Sbjct: 1   MTVELMNFPK--MEDQKAIQEAASQGLQSMEHLIRFLSHQQQHPNNQSARLDCTDITDHT 58

Query: 56  VSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPP---AP 112
           VSKFKKVISLLNRTGHARFRRGP       +    P   +S +   +QTL+L P     P
Sbjct: 59  VSKFKKVISLLNRTGHARFRRGP-------AQPVHPVHFSSSHPSPSQTLSLAPALNLTP 111

Query: 113 TMAVAPSTA-----------SYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSS 161
           T A  P TA           S+ QSQPHS+TLDFT+P+ F+ N+KS E+EF+KD+F VSS
Sbjct: 112 TPASVPVTAPAVVQQATIESSFGQSQPHSMTLDFTRPNAFASNLKSAEIEFAKDNFSVSS 171

Query: 162 NSSFMSSAITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDL 221
            SSFMSSAITGDGSVSNGK G SSIFLAP APAVS  KPPL+  P+KKRC +H DHSDD 
Sbjct: 172 GSSFMSSAITGDGSVSNGKLG-SSIFLAP-APAVSGAKPPLSTAPFKKRCHEH-DHSDDT 228

Query: 222 SGKFSGSTSGNN--KCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGS 279
           S KFS S S +   KCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGS
Sbjct: 229 SCKFSASGSASGSGKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGS 288

Query: 280 PYPR 283
           PYPR
Sbjct: 289 PYPR 292

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548594|ref|XP_002515353.1| WRKY transcription factor, putative [Ricinus communis] gi|223545297|gb|EEF46802.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 209/287 (72%), Positives = 227/287 (79%), Gaps = 27/287 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           MAVELM F K  MEDQ AIQEAA+QG+KSMEHLIRLMSH   SNHVDC+DLTDLTVSKF+
Sbjct: 1   MAVELMSFAK--MEDQMAIQEAASQGLKSMEHLIRLMSH--KSNHVDCTDLTDLTVSKFR 56

Query: 61  KVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPST 120
           KVISLLNRTGHARFRRGPV SS   SSA AP+A+ S N   T+       AP   V P T
Sbjct: 57  KVISLLNRTGHARFRRGPVQSSSCLSSAPAPSASQSINLNTTRIAAPP--APAPGVHPVT 114

Query: 121 ---ASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVS 177
              AS+VQ QP S+TLDFTKP++FS N KS+ELEFS      SS+SSFMSSAITGDGSVS
Sbjct: 115 APAASFVQ-QPQSVTLDFTKPNIFSSNGKSSELEFSV-----SSSSSFMSSAITGDGSVS 168

Query: 178 NGKQGGSSIFLAPQAPAVSAGKPPLAAQPY-KKRCQDHKDHSDDLSGKFSGSTSGNNKCH 236
           NGKQ GSSIFL   APAVS GKPPL++ PY KKRC +H DHS+D+SG  SG      KCH
Sbjct: 169 NGKQ-GSSIFL---APAVSGGKPPLSSAPYNKKRCHEH-DHSEDVSGSASG------KCH 217

Query: 237 CSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           CSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR
Sbjct: 218 CSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 264

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16604573|gb|AAL24088.1| putative putaive DNA-binding protein [Arabidopsis thaliana]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 209/286 (73%), Gaps = 23/286 (8%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            K RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 221 KKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30689072|ref|NP_849559.1| putative WRKY transcription factor 11 [Arabidopsis thaliana] gi|39932735|sp|Q9SV15.2|WRK11_ARATH RecName: Full=Probable WRKY transcription factor 11; AltName: Full=WRKY DNA-binding protein 11 gi|23297314|gb|AAN12939.1| putative DNA-binding protein [Arabidopsis thaliana] gi|332660527|gb|AEE85927.1| putative WRKY transcription factor 11 [Arabidopsis thaliana]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 209/286 (73%), Gaps = 23/286 (8%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            K RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 221 KKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537078|gb|AAM61419.1| putaive DNA-binding protein [Arabidopsis thaliana]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 209/286 (73%), Gaps = 23/286 (8%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            K RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 221 KKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798820|ref|XP_002867294.1| WRKY transcription factor 11 [Arabidopsis lyrata subsp. lyrata] gi|297313130|gb|EFH43553.1| WRKY transcription factor 11 [Arabidopsis lyrata subsp. lyrata]

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 181/291 (62%), Positives = 214/291 (73%), Gaps = 23/291 (7%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  M+DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--MDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMA---- 115
           K VISLLNRTGHARFRRGPVHS+ S    S         +P      +T PA T      
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSPKQQSQIVKTIQPKAP-----VVTQPARTTTNLPQ 113

Query: 116 VAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGS 175
           + P  +S+V S   S+TLDF+KPS+F    KS++LEFSK++F VS NSSFMSS ITGDGS
Sbjct: 114 IVPPPSSFVHSNQPSVTLDFSKPSVFGTKAKSSDLEFSKENFSVSLNSSFMSSGITGDGS 173

Query: 176 VSNGKQGGSSIFLA--PQAPAVSAGKPPLAA-QPYKKRCQDHKDHSDDLSGKFSGSTSGN 232
           VSNGK     IFLA  P  P  S+GKPPLAA  PY+KRC +H +HS+  SGK SGS  G 
Sbjct: 174 VSNGK-----IFLASAPSQPVNSSGKPPLAAGHPYRKRCLEH-EHSESFSGKVSGS--GY 225

Query: 233 NKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            KCHC K RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 226 GKCHCKKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 276

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329054|ref|NP_567878.2| putative WRKY transcription factor 11 [Arabidopsis thaliana] gi|15384215|gb|AAK96194.1|AF404856_1 WRKY transcription factor 11 [Arabidopsis thaliana] gi|5262766|emb|CAB45914.1| putaive DNA-binding protein [Arabidopsis thaliana] gi|7270058|emb|CAB79873.1| putaive DNA-binding protein [Arabidopsis thaliana] gi|24762195|gb|AAN64164.1| putative WRKY family transcription factor [Arabidopsis thaliana] gi|332660528|gb|AEE85928.1| putative WRKY transcription factor 11 [Arabidopsis thaliana]

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 210/286 (73%), Gaps = 24/286 (8%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
           K VISLLNRTGHARFRRGPVHS+ S++S    +       P    +  T   P +   PS
Sbjct: 59  KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118

Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
                     S+TLDF+KPS+F    KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query: 180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
           K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query: 238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            K+RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 221 -KKRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 265

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282033|dbj|BAJ33882.1| unnamed protein product [Thellungiella halophila]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/291 (62%), Positives = 220/291 (75%), Gaps = 17/291 (5%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMS-----HHQSSNHVDCSDLTDLT 55
           MAV+LM FPK MM+DQ AIQEAA+QG++SM+HLIR++S     H+ ++N+VDCS LTD T
Sbjct: 1   MAVDLMRFPK-MMDDQKAIQEAASQGLQSMDHLIRILSNRPEQHNNNNNNVDCSQLTDFT 59

Query: 56  VSKFKKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLT---PPAP 112
           VSKFK VISLLNRTG ARFRR PVHSSP    +     AA   +P   T  L+   PP P
Sbjct: 60  VSKFKTVISLLNRTGRARFRRAPVHSSPLKQQSQLVNIAAPPETPTRTTANLSQIVPPPP 119

Query: 113 TMAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITG 172
             +V  + +S+V S   S+TLDFTKPS+F    KS+ELEF+K+SF VS NSS+MSSAITG
Sbjct: 120 QPSVVVTPSSFVHSNQPSVTLDFTKPSIFGSKSKSSELEFAKESFSVSLNSSYMSSAITG 179

Query: 173 DGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGN 232
           DGSVS G    SSIFL   AP  S+GKPPLA  PY+KRC +H +HS+D SGK SGS  G+
Sbjct: 180 DGSVSKG----SSIFLG-SAPVNSSGKPPLAGHPYRKRCLEH-EHSEDFSGKISGS--GH 231

Query: 233 NKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
            KCHC K RKNR+++T+RVPAIS+KIADIPPDE+SWRKYGQKPIKGSP+PR
Sbjct: 232 GKCHCKKSRKNRMRRTVRVPAISAKIADIPPDEFSWRKYGQKPIKGSPHPR 282

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|45479880|gb|AAS66778.1| WRKY transcription factor 11 [Capsella rubella]

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 175/292 (59%), Positives = 212/292 (72%), Gaps = 28/292 (9%)

Query: 1   MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
           MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct: 1   MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHTVDCSEITDFTVSKF 58

Query: 60  KKVISLLNRTGHARFRRGPVHSSPSSS------SASAPAAAASGNSPHTQTLTLTPPAPT 113
           K VISLLNRTGHARFRRGPV SSP  S        +AP  +    +  T  L+ T P P+
Sbjct: 59  KTVISLLNRTGHARFRRGPVRSSPVVSPPLPQIVKTAPIVSQPLRT--TTNLSQTAPPPS 116

Query: 114 MAVAPSTASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGD 173
             V P        QP     DF+KP++F    KS++LEFSK++F VS NSS+MSSAITGD
Sbjct: 117 SFVLPR-------QPRRSHSDFSKPTIFGSKSKSSDLEFSKENFSVSLNSSYMSSAITGD 169

Query: 174 GSVSNGKQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSG 231
           GSVSNGK     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SG+ SGS  G
Sbjct: 170 GSVSNGK-----IFLASAPSQPVTSSGKPPLAGHPYRKRCLEH-EHSESFSGRVSGS--G 221

Query: 232 NNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           + KCHC K RKN++K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct: 222 HGKCHCKKSRKNKMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 273

Source: Capsella rubella

Species: Capsella rubella

Genus: Capsella

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	283
TAIR|locus:2046653	321	WRKY17 "WRKY DNA-binding prote	0.544	0.479	0.614	1.5e-77
TAIR|locus:2125239	325	WRKY11 "WRKY DNA-binding prote	0.929	0.809	0.552	1.1e-73
TAIR|locus:2135967	353	WRKY7 "WRKY DNA-binding protei	0.286	0.229	0.536	2.2e-36
TAIR|locus:2058568	317	WRKY15 "WRKY DNA-binding prote	0.240	0.214	0.614	5.3e-30
TAIR|locus:2064377	380	WRKY21 "WRKY DNA-binding prote	0.346	0.257	0.513	2.6e-28
TAIR|locus:2084943	330	WRKY39 "WRKY DNA-binding prote	0.204	0.175	0.783	1.1e-27
TAIR|locus:2148815	330	WRKY74 "WRKY DNA-binding prote	0.250	0.215	0.680	2.5e-26
UNIPROTKB|Q32SG4	397	Q32SG4 "Protein WRKY1" [Zea ma	0.204	0.146	0.655	6.1e-19
TAIR|locus:2044777	427	WRKY35 "WRKY DNA-binding prote	0.159	0.105	0.54	4e-07
TAIR|locus:2125043	298	WRKY22 [Arabidopsis thaliana (	0.257	0.244	0.430	7.8e-07

TAIR|locus:2046653 WRKY17 "WRKY DNA-binding protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
 Identities = 102/166 (61%), Positives = 120/166 (72%)

Query:   122 SYVQSQPHSLTLDFTKPSLFSGNVKSTEL-EXXXXXXXXXXXXXXXXXAITGDGSVSNGK 180
             S+VQ+   S+TLDFT+PS+F    KS+E+ E                 AITGDGSVS G 
Sbjct:   106 SFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSKG- 164

Query:   181 QGGSSIFLAPQAPAV---SAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
                SSIFLAP APAV   S+GKPPL+  PY+KRC +H DHS+  SGK SGS  GN KCHC
Sbjct:   165 ---SSIFLAP-APAVPVTSSGKPPLSGLPYRKRCFEH-DHSEGFSGKISGS--GNGKCHC 217

Query:   238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
              K RKNR+K+T+RVPA+S+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct:   218 KKSRKNRMKRTVRVPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPR 263

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2125239 WRKY11 "WRKY DNA-binding protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 158/286 (55%), Positives = 183/286 (63%)

Query:     1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
             MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct:     1 MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query:    60 KKVISLLNRTGHARFRRGPVHXXXXXXXXXXXXXXXXGNSPHXXXXXXXXXXXXXXXXXX 119
             K VISLLNRTGHARFRRGPVH                   P                   
Sbjct:    59 KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNH-------- 110

Query:   120 XXSYVQSQPHSLTLDFTKPSLFSGNVKSTELEXXXXXXXXXXXXXXXXXAITGDGSVSNG 179
                 +   P S+TLDF+KPS+F    KS ELE                 AITGDGSVSNG
Sbjct:   111 --PQIVPPPSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query:   180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
             K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct:   169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query:   238 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
              K RKNR+K+T+RVPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct:   221 KKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 266

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2135967 WRKY7 "WRKY DNA-binding protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
 Identities = 52/97 (53%), Positives = 68/97 (70%)

Query:   187 FLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVK 246
             F  P   + S GKPPL++   K+RC                ++S +++CHCSK+RK+RVK
Sbjct:   221 FTNPSQLSGSRGKPPLSSASLKRRC----------------NSSPSSRCHCSKKRKSRVK 264

Query:   247 KTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
             + IRVPA+SSK+ADIP DE+SWRKYGQKPIKGSP+PR
Sbjct:   265 RVIRVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPR 301

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA;IPI

GO:0006457 "protein folding" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2058568 WRKY15 "WRKY DNA-binding protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
 Identities = 43/70 (61%), Positives = 60/70 (85%)

Query:   215 KDHSDDL-SGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQ 273
             K +S++L +GK + S S + +CHCSK+RK + ++ IRVPAIS+K++D+PPD+YSWRKYGQ
Sbjct:   192 KCNSENLLTGKCA-SASSSGRCHCSKKRKIKQRRIIRVPAISAKMSDVPPDDYSWRKYGQ 250

Query:   274 KPIKGSPYPR 283
             KPIKGSP+PR
Sbjct:   251 KPIKGSPHPR 260

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2064377 WRKY21 "WRKY DNA-binding protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
 Identities = 57/111 (51%), Positives = 74/111 (66%)

Query:   173 DGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGN 232
             DGSV+N +   S  F  P     S  +  L +   K++C    D    L     GS+S  
Sbjct:   236 DGSVANIEGKNSFHFGVPS----STDQNSLHS---KRKCPLKGDEHGSLK---CGSSS-- 283

Query:   233 NKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
              +CHC+K+RK+RV+++IRVPAIS+K+ADIPPD+YSWRKYGQKPIKGSPYPR
Sbjct:   284 -RCHCAKKRKHRVRRSIRVPAISNKVADIPPDDYSWRKYGQKPIKGSPYPR 333

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2084943 WRKY39 "WRKY DNA-binding protein 39" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 47/60 (78%), Positives = 55/60 (91%)

Query:   226 SGSTS-GN-NKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
             SGS   G+ +KCHCSK+RK RVK++I+VPAIS+KIADIPPDEYSWRKYGQKPIKGSP+PR
Sbjct:   223 SGSLKCGSRSKCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPR 282

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2148815 WRKY74 "WRKY DNA-binding protein 74" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 49/72 (68%), Positives = 56/72 (77%)

Query:   213 DH-KDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKY 271
             DH   HS   S   S      +KCHCSK+RK RVK++I+VPAIS+KIADIPPDEYSWRKY
Sbjct:   211 DHISQHSRRTSCSGSLKCGSKSKCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKY 270

Query:   272 GQKPIKGSPYPR 283
             GQKPIKGSP+PR
Sbjct:   271 GQKPIKGSPHPR 282

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

UNIPROTKB|Q32SG4 Q32SG4 "Protein WRKY1" [Zea mays (taxid:4577)]

 Score = 231 (86.4 bits), Expect = 6.1e-19, P = 6.1e-19
 Identities = 38/58 (65%), Positives = 52/58 (89%)

Query:   226 SGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
             +G  +  ++CHCSK+RK R++++I+VPAIS+K+ADIP DE+SWRKYGQKPIKGSP+PR
Sbjct:   295 TGRCATGSRCHCSKKRKLRIRRSIKVPAISNKVADIPADEFSWRKYGQKPIKGSPHPR 352

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2044777 WRKY35 "WRKY DNA-binding protein 35" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 4.0e-07, P = 4.0e-07
 Identities = 27/50 (54%), Positives = 38/50 (76%)

Query:   239 KRRKNRVKKTIRVPA---ISSKIAD--IPPDEYSWRKYGQKPIKGSPYPR 283
             KRRK++ KK + +PA   ++S+ +   +P D ++WRKYGQKPIKGSPYPR
Sbjct:   186 KRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPR 235

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2125043 WRKY22 [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 34/79 (43%), Positives = 43/79 (54%)

Query:   205 QPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPD 264
             +P K + Q         SG  +   SG+N    SKRRK + KK   V A +     +  D
Sbjct:    76 EPRKPQNQKRPLSLSASSGSVTSKPSGSNTSR-SKRRKIQHKKVCHVAAEA-----LNSD 129

Query:   265 EYSWRKYGQKPIKGSPYPR 283
              ++WRKYGQKPIKGSPYPR
Sbjct:   130 VWAWRKYGQKPIKGSPYPR 148

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0010150 "leaf senescence" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SV15	WRK11_ARATH	No assigned EC number	0.6188	0.9293	0.8092	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	283
pfam10533	47	pfam10533, Plant_zn_clust, Plant zinc cluster doma	3e-16
smart00774	59	smart00774, WRKY, DNA binding domain	5e-10
pfam03106	60	pfam03106, WRKY, WRKY DNA -binding domain	2e-09

>gnl|CDD|192617 pfam10533, Plant_zn_clust, Plant zinc cluster domain

 Score = 70.5 bits (173), Expect = 3e-16
 Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 6/53 (11%)

Query: 208 KKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIAD 260
           KKRC +  D      GK + S+SG  +CHCSK+RK+RVK+TIRVPAISSKIAD
Sbjct: 1   KKRCSEANDSE----GKCAASSSG--RCHCSKKRKSRVKRTIRVPAISSKIAD 47

This zinc binding domain was identified by Babu and colleagues and found associated with the WRKY domain pfam03106. Length = 47

>gnl|CDD|214815 smart00774, WRKY, DNA binding domain

 Score = 54.0 bits (131), Expect = 5e-10
 Identities = 17/22 (77%), Positives = 17/22 (77%)

Query: 262 PPDEYSWRKYGQKPIKGSPYPR 283
             D Y WRKYGQK IKGSPYPR
Sbjct: 1   LDDGYQWRKYGQKVIKGSPYPR 22

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Length = 59

>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 16/22 (72%), Positives = 19/22 (86%)

Query: 262 PPDEYSWRKYGQKPIKGSPYPR 283
             D Y+WRKYGQKP+KGSP+PR
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPR 22

Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	283
PF10533	47	Plant_zn_clust: Plant zinc cluster domain; InterPr	99.5
smart00774	59	WRKY DNA binding domain. The WRKY domain is a DNA	99.27
PF03106	60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	99.25
PF05344	65	DUF746: Domain of Unknown Function (DUF746); Inter	84.8

>PF10533 Plant_zn_clust: Plant zinc cluster domain; InterPro: IPR018872 This zinc binding domain is found associated with the WRKY domain IPR003657 from INTERPRO []

Probab=99.50  E-value=1.3e-14  Score=103.54  Aligned_cols=47  Identities=66%  Similarity=1.103  Sum_probs=39.9

Q ss_pred             cccCCCCCCCCCCCCCccccCCCCCCccccccccccceeeEEEEecccCCCcC
Q 023361          208 KKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIAD  260 (283)
Q Consensus       208 krkC~~~g~~~~d~sgKc~~~~~~~~~c~~sKrRk~~~k~~vrv~~~s~~~~~  260 (283)
                      ||+|+++    ++.+++|.+  +++|+|||+||||+|+||+|||||++++++|
T Consensus         1 krkC~~~----~~~~~~~~~--sssgrCHCsKkRK~RvKR~irVPAiS~K~AD   47 (47)
T PF10533_consen    1 KRKCHSH----NDSSGKCKC--SSSGRCHCSKKRKSRVKRTIRVPAISSKIAD   47 (47)
T ss_pred             CCccccc----CcccCcccc--CCCCcccCCCcccccceeeEEeecccccccC
Confidence            6899997    345567642  7889999999999999999999999998765

>smart00774 WRKY DNA binding domain

Probab=99.27  E-value=1.2e-12  Score=97.57  Aligned_cols=22  Identities=73%  Similarity=1.369  Sum_probs=21.1

Q ss_pred             CCCCccccccCCCCCCCCCCCC
Q 023361          262 PPDEYSWRKYGQKPIKGSPYPR  283 (283)
Q Consensus       262 ~~DgysWRKYGQK~Ikgsp~PR  283 (283)
                      ++|||.|||||||.|+|++|||
T Consensus         1 ~~DGy~WRKYGQK~ikgs~~pR   22 (59)
T smart00774        1 LDDGYQWRKYGQKVIKGSPFPR   22 (59)
T ss_pred             CCCcccccccCcEecCCCcCcc
Confidence            4899999999999999999998

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif

Probab=99.25  E-value=5.3e-13  Score=99.30  Aligned_cols=22  Identities=77%  Similarity=1.417  Sum_probs=18.7

Q ss_pred             CCCCccccccCCCCCCCCCCCC
Q 023361          262 PPDEYSWRKYGQKPIKGSPYPR  283 (283)
Q Consensus       262 ~~DgysWRKYGQK~Ikgsp~PR  283 (283)
                      ++|||.|||||||.|+|++|||
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pR   22 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPR   22 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEE
T ss_pred             CCCCCchhhccCcccCCCceee
Confidence            4899999999999999999998

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.

>PF05344 DUF746: Domain of Unknown Function (DUF746); InterPro: IPR008008 This is a short conserved region found in some transposons

Probab=84.80  E-value=1.1  Score=34.53  Aligned_cols=50  Identities=28%  Similarity=0.397  Sum_probs=35.1

Q ss_pred             HHHHHHHHhcCCCCCCC----Cch-hhhHHHHHhhhhhhhhhcCCcCc--cccccCC
Q 023361           29 SMEHLIRLMSHHQSSNH----VDC-SDLTDLTVSKFKKVISLLNRTGH--ARFRRGP   78 (283)
Q Consensus        29 S~e~li~LLSq~~~q~~----~d~-~~~td~AVskFKkVISLL~RtGH--ARFRR~P   78 (283)
                      .++.||++||++-.-.+    ... ..++-.-|..|++-+=.||.+||  +|+|=+-
T Consensus         2 ~~~~fIrlLs~~~s~~~Aa~~lG~~~~~v~~wv~~fR~wll~LDPSG~~E~RVRLg~   58 (65)
T PF05344_consen    2 KARAFIRLLSQQISVAQAADRLGTDPGTVRRWVRMFRQWLLQLDPSGHWEARVRLGV   58 (65)
T ss_pred             cHHHHHHHhcccccHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCCChHHHhhcCC
Confidence            47899999998732211    110 23355679999999999999998  6777543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	283
2ayd_A	76	Crystal Structure Of The C-Terminal Wrky Domainof A		9e-05
1wj2_A	78	Solution Structure Of The C-Terminal Wrky Domain Of		7e-04

>pdb|2AYD|A Chain A, Crystal Structure Of The C-Terminal Wrky Domainof Atwrky1, An Sa-Induced And Partially Npr1-Dependent Transcription Factor Length = 76

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 250 RVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           R+   +  + DI  D Y WRKYGQK +KGSPYPR
Sbjct: 2   RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPR 35

>pdb|1WJ2|A Chain A, Solution Structure Of The C-Terminal Wrky Domain Of Atwrky4 Length = 78

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 259 ADIPPDEYSWRKYGQKPIKGSPYPR 283
            D+  D Y WRKYGQK +KG+PYPR
Sbjct: 14  VDLLDDGYRWRKYGQKVVKGNPYPR 38
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	283
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	5e-12
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76

 Score = 59.4 bits (144), Expect = 5e-12
 Identities = 19/34 (55%), Positives = 23/34 (67%)

Query: 250 RVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
           R+   +  + DI  D Y WRKYGQK +KGSPYPR
Sbjct: 2   RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPR 35

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78

 Score = 55.1 bits (133), Expect = 2e-10
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 250 RVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR 283
                ++   D+  D Y WRKYGQK +KG+PYPR
Sbjct: 5   SSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPR 38

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-05
 Identities = 44/340 (12%), Positives = 86/340 (25%), Gaps = 123/340 (36%)

Query: 10  KRMMEDQ---------TAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
           ++ +E+          + I+    Q        I       + N V         VS+ +
Sbjct: 80  QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV----FAKYNVSRLQ 135

Query: 61  KVISLLNRTGHARFRRGP---VHSSPSS--SSASAPAAAASG-----------------N 98
             + L  R      R      +     S  +  +     +                   N
Sbjct: 136 PYLKL--RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 99  SPHT-----QTL--------------TLTPPAPTMAVAPSTASYVQSQPHS---LTLDFT 136
           SP T     Q L              +        ++       ++S+P+    L L   
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-- 251

Query: 137 KPSLFSGNVKSTELEFSKDSF---C---V----SSNSSFMSSAITGDGSVSNGKQG---- 182
                  NV++ +     ++F   C   +       + F+S+A T   S+ +        
Sbjct: 252 -------NVQNAKA---WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301

Query: 183 -GSSIF----------LAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSG 231
              S+           L  +    +    P       +  +D     D+           
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTN----PRRLSIIAESIRDGLATWDNW---------- 347

Query: 232 NNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKY 271
                    +     K   +  I S +  + P EY  RK 
Sbjct: 348 ---------KHVNCDKLTTI--IESSLNVLEPAEY--RKM 374

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	283
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	99.47
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	99.46

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}

Probab=99.47  E-value=5.3e-15  Score=114.01  Aligned_cols=30  Identities=60%  Similarity=1.145  Sum_probs=27.0

Q ss_pred             ccCCCcCCCCCCccccccCCCCCCCCCCCC
Q 023361          254 ISSKIADIPPDEYSWRKYGQKPIKGSPYPR  283 (283)
Q Consensus       254 ~s~~~~~~~~DgysWRKYGQK~Ikgsp~PR  283 (283)
                      .+..+.++++|||.|||||||.||||+|||
T Consensus         6 ~t~~~~~~~~DGy~WRKYGQK~ikgs~~PR   35 (76)
T 2ayd_A            6 HTQTLFDIVNDGYRWRKYGQKSVKGSPYPR   35 (76)
T ss_dssp             EEECSSSCCCCSSCEEEEEEECCTTCSSCE
T ss_pred             EecCCCCcCCCCchhhhCcccccCCCCCce
Confidence            344578999999999999999999999998

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*

Probab=99.46  E-value=8.7e-15  Score=113.29  Aligned_cols=34  Identities=47%  Similarity=0.921  Sum_probs=28.3

Q ss_pred             EEecccCCCcCCCCCCccccccCCCCCCCCCCCC
Q 023361          250 RVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPR  283 (283)
Q Consensus       250 rv~~~s~~~~~~~~DgysWRKYGQK~Ikgsp~PR  283 (283)
                      +|...+..+.++++|||.|||||||.|||++|||
T Consensus         5 ~~~~~t~s~~~~~dDGy~WRKYGQK~ikgs~~PR   38 (78)
T 1wj2_A            5 SSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPR   38 (78)
T ss_dssp             ---CCCCCCCCCCCSSSCBCCCEEECCTTCSSCE
T ss_pred             eEEEeccCCCCcCCCCchhhhCcccccCCCcCee
Confidence            4455566678999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	283
d1wj2a_	71	g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr	3e-08

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.5 bits (113), Expect = 3e-08
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 259 ADIPPDEYSWRKYGQKPIKGSPYPR 283
            D+  D Y WRKYGQK +KG+PYPR
Sbjct: 7   VDLLDDGYRWRKYGQKVVKGNPYPR 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	283
d1wj2a_	71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	99.42

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.42  E-value=1.4e-14  Score=108.66  Aligned_cols=28  Identities=57%  Similarity=1.155  Sum_probs=25.9

Q ss_pred             CCCcCCCCCCccccccCCCCCCCCCCCC
Q 023361          256 SKIADIPPDEYSWRKYGQKPIKGSPYPR  283 (283)
Q Consensus       256 ~~~~~~~~DgysWRKYGQK~Ikgsp~PR  283 (283)
                      ..+.++++|||.|||||||.|+|++|||
T Consensus         4 ~~~~~~~dDGy~WRKYGQK~ikgs~~pR   31 (71)
T d1wj2a_           4 TSEVDLLDDGYRWRKYGQKVVKGNPYPR   31 (71)
T ss_dssp             CCCCCCCCSSSCBCCCEEECCTTCSSCE
T ss_pred             ccccccCCCCcEecccCceeccCCCCce
Confidence            4567899999999999999999999998