Citrus Sinensis ID: 023387

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDVPQHTGNV
cEEEEcccccccccccHHHHHHHHHccEEEEccccccccccccccHHHHHHHHcccccEEccHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHHcccccccccEEEEcEEccccccccHHHHHHHHHHccccEEEEEEEEcccccHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccEEEEEEHHHHHHcccccccEEEEEEccccHHHHHHHHHHccccccccccccc
cEEEEEcccccccccEHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEcHHHHHHcHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcHHHHHHHHHHccEEEccccEEEEEccccccccccHHHHHHHHHHccccEEEEEEEEEccccHHHHHccccEccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccEEEEccHHHHHHcccccccEEEEEEccccHHHHHHHHHHccccccccccccc
MLYIIGlglgderdITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVvgdpfgatthTDLVVRAKKLGIQVKAVHNASVMNAVGICGlqlyrfgetvsipfftetwrpgsfyekikrnrslglhtLCLLDirvkepsleslcrgkklyepprymtVNIAIEQLLEVELlqgesvynedtLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVgethpveeemldfyrltddvpqhtgnv
mlyiiglglgderdiTLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFftetwrpgsfyeKIKRNRSLGLHTLCLLDirvkepsleslcrgkklyepprYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDfyrltddvpqhtgnv
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIeqllevellqgeSVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDVPQHTGNV
*LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADR*****************NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLT**********
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDV*******
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDVPQHTGNV
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDV*******
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MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRLLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDVPQHTGNV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query283 2.2.26 [Sep-21-2011]
O81769277 Probable diphthine syntha yes no 0.957 0.978 0.827 1e-130
Q75JG8273 Diphthine synthase OS=Dic yes no 0.961 0.996 0.596 3e-97
Q9H2P9285 Diphthine synthase OS=Hom yes no 0.954 0.947 0.592 5e-95
Q9CWQ0281 Diphthine synthase OS=Mus yes no 0.950 0.957 0.602 3e-94
Q5E982285 Diphthine synthase OS=Bos yes no 0.954 0.947 0.585 8e-94
Q6BN80300 Diphthine synthase OS=Deb yes no 0.961 0.906 0.580 5e-89
Q59NX9299 Diphthine synthase OS=Can N/A no 0.950 0.899 0.576 8e-88
O74898283 Diphthine synthase OS=Sch yes no 0.936 0.936 0.575 2e-86
Q6C1E0300 Diphthine synthase OS=Yar yes no 0.957 0.903 0.559 4e-86
Q6CIZ1298 Diphthine synthase OS=Klu yes no 0.936 0.889 0.571 4e-84
>sp|O81769|DPH5_ARATH Probable diphthine synthase OS=Arabidopsis thaliana GN=At4g31790 PE=2 SV=1 Back     alignment and function desciption
 Score =  466 bits (1198), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/272 (82%), Positives = 246/272 (90%), Gaps = 1/272 (0%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct: 1   MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct: 61  ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLLDIRVKEP+ ESL
Sbjct: 121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLLDIRVKEPTFESL 180

Query: 181 CR-GKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMR 239
           CR GKK YEPPRYM+VN AIEQLLEVE   G+SVY EDT CVGFARLGSEDQ IVAGTM+
Sbjct: 181 CRGGKKQYEPPRYMSVNTAIEQLLEVEQKHGDSVYGEDTQCVGFARLGSEDQTIVAGTMK 240

Query: 240 LLQMVDFGAPLHCLVIVGETHPVEEEMLDFYR 271
            L+ VDFGAPLHCLVIVGETHPVEEEML+FY+
Sbjct: 241 QLESVDFGAPLHCLVIVGETHPVEEEMLEFYK 272
S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 9EC: 8
>sp|Q75JG8|DPH5_DICDI Diphthine synthase OS=Dictyostelium discoideum GN=dph5 PE=3 SV=1 Back     alignment and function description
>sp|Q9H2P9|DPH5_HUMAN Diphthine synthase OS=Homo sapiens GN=DPH5 PE=1 SV=2 Back     alignment and function description
>sp|Q9CWQ0|DPH5_MOUSE Diphthine synthase OS=Mus musculus GN=Dph5 PE=2 SV=2 Back     alignment and function description
>sp|Q5E982|DPH5_BOVIN Diphthine synthase OS=Bos taurus GN=DPH5 PE=2 SV=1 Back     alignment and function description
>sp|Q6BN80|DPH5_DEBHA Diphthine synthase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|Q59NX9|DPH5_CANAL Diphthine synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|O74898|DPH5_SCHPO Diphthine synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dph5 PE=3 SV=1 Back     alignment and function description
>sp|Q6C1E0|DPH5_YARLI Diphthine synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|Q6CIZ1|DPH5_KLULA Diphthine synthase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DPH5 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
225458011285 PREDICTED: probable diphthine synthase i 0.996 0.989 0.829 1e-136
224062019285 predicted protein [Populus trichocarpa] 0.985 0.978 0.806 1e-132
357466919274 Diphthine synthase [Medicago truncatula] 0.957 0.989 0.826 1e-132
449469897286 PREDICTED: probable diphthine synthase-l 0.957 0.947 0.819 1e-132
356575604278 PREDICTED: probable diphthine synthase-l 0.982 1.0 0.813 1e-132
255538906285 diphthine synthase, putative [Ricinus co 0.961 0.954 0.841 1e-132
449532549286 PREDICTED: LOW QUALITY PROTEIN: probable 0.957 0.947 0.815 1e-131
356521535274 PREDICTED: probable diphthine synthase-l 0.957 0.989 0.822 1e-131
255637764278 unknown [Glycine max] 0.982 1.0 0.810 1e-130
15236075277 diphthine synthase [Arabidopsis thaliana 0.957 0.978 0.827 1e-129
>gi|225458011|ref|XP_002280149.1| PREDICTED: probable diphthine synthase isoform 1 [Vitis vinifera] gi|359492226|ref|XP_003634386.1| PREDICTED: probable diphthine synthase isoform 2 [Vitis vinifera] gi|302142643|emb|CBI19846.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/282 (82%), Positives = 256/282 (90%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDERDITLRGLEAVKKC KV+IEAYTSLLSFGLS++GLSTLE LYGKPI L
Sbjct: 1   MLYIIGLGLGDERDITLRGLEAVKKCSKVFIEAYTSLLSFGLSSNGLSTLENLYGKPITL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD ILS+++ S+V FLVVGDPFGATTH+DLVVRAKKLG+ VK VHNASVMN
Sbjct: 61  ADREMVEEKADDILSDARHSDVGFLVVGDPFGATTHSDLVVRAKKLGVDVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+GICGLQLYR+GET+SIPFFTETWRP SFYEKI+RNR LGLHTLCLLDIRVKEPSLESL
Sbjct: 121 AIGICGLQLYRYGETISIPFFTETWRPDSFYEKIQRNRVLGLHTLCLLDIRVKEPSLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRL 240
           CRGKK YEPPRYMT+N AIEQLLEVE ++GES + EDT CVGFARLGSEDQMIVAG+MR 
Sbjct: 181 CRGKKQYEPPRYMTINTAIEQLLEVEQMRGESAFCEDTDCVGFARLGSEDQMIVAGSMRQ 240

Query: 241 LQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLTDDVPQHTGN 282
           L  VDFGAPLHCLVIVG+THPVEEEMLDFY+L  +  +   N
Sbjct: 241 LLKVDFGAPLHCLVIVGKTHPVEEEMLDFYKLKGESAESKHN 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224062019|ref|XP_002300714.1| predicted protein [Populus trichocarpa] gi|222842440|gb|EEE79987.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357466919|ref|XP_003603744.1| Diphthine synthase [Medicago truncatula] gi|355492792|gb|AES73995.1| Diphthine synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449469897|ref|XP_004152655.1| PREDICTED: probable diphthine synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356575604|ref|XP_003555929.1| PREDICTED: probable diphthine synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|255538906|ref|XP_002510518.1| diphthine synthase, putative [Ricinus communis] gi|223551219|gb|EEF52705.1| diphthine synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449532549|ref|XP_004173243.1| PREDICTED: LOW QUALITY PROTEIN: probable diphthine synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356521535|ref|XP_003529410.1| PREDICTED: probable diphthine synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|255637764|gb|ACU19204.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|15236075|ref|NP_194907.1| diphthine synthase [Arabidopsis thaliana] gi|42573117|ref|NP_974655.1| diphthine synthase [Arabidopsis thaliana] gi|38258855|sp|O81769.1|DPH5_ARATH RecName: Full=Probable diphthine synthase; AltName: Full=Diphthamide biosynthesis methyltransferase gi|13605813|gb|AAK32892.1|AF367305_1 AT4g31790/F28M20_20 [Arabidopsis thaliana] gi|3281849|emb|CAA19744.1| methyltransferase - like protein [Arabidopsis thaliana] gi|7270082|emb|CAB79897.1| methyltransferase-like protein [Arabidopsis thaliana] gi|23505927|gb|AAN28823.1| At4g31790/F28M20_20 [Arabidopsis thaliana] gi|332660558|gb|AEE85958.1| diphthine synthase [Arabidopsis thaliana] gi|332660559|gb|AEE85959.1| diphthine synthase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
TAIR|locus:2124859277 AT4G31790 [Arabidopsis thalian 0.957 0.978 0.797 4.1e-113
DICTYBASE|DDB_G0276115273 dph5 "diphthamide biosynthesis 0.950 0.985 0.577 6.2e-85
UNIPROTKB|E2RQL8280 DPH5 "Uncharacterized protein" 0.954 0.964 0.564 1.2e-83
MGI|MGI:1916990281 Dph5 "DPH5 homolog (S. cerevis 0.950 0.957 0.580 2.4e-83
UNIPROTKB|Q9H2P9285 DPH5 "Diphthine synthase" [Hom 0.954 0.947 0.571 3.1e-83
UNIPROTKB|F1S569285 DPH5 "Uncharacterized protein" 0.954 0.947 0.571 5e-83
RGD|1307867281 Dph5 "DPH5 homolog (S. cerevis 0.950 0.957 0.577 5e-83
ZFIN|ZDB-GENE-041114-85288 dph5 "DPH5 homolog (S. cerevis 0.936 0.920 0.587 5e-83
UNIPROTKB|Q5E982285 DPH5 "Diphthine synthase" [Bos 0.954 0.947 0.564 2.8e-82
UNIPROTKB|F1P418286 DPH5 "Uncharacterized protein" 0.936 0.926 0.554 2.6e-79
TAIR|locus:2124859 AT4G31790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
 Identities = 217/272 (79%), Positives = 237/272 (87%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct:     1 MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct:    61 ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLLDIRVKEP+ ESL
Sbjct:   121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLLDIRVKEPTFESL 180

Query:   181 CRG-KKLYEPPRYMTVNIAIXXXXXXXXXXXXSVYNEDTLCVGFARLGSEDQMIVAGTMR 239
             CRG KK YEPPRYM+VN AI            SVY EDT CVGFARLGSEDQ IVAGTM+
Sbjct:   181 CRGGKKQYEPPRYMSVNTAIEQLLEVEQKHGDSVYGEDTQCVGFARLGSEDQTIVAGTMK 240

Query:   240 LLQMVDFGAPLHCLVIVGETHPVEEEMLDFYR 271
              L+ VDFGAPLHCLVIVGETHPVEEEML+FY+
Sbjct:   241 QLESVDFGAPLHCLVIVGETHPVEEEMLEFYK 272
GO:0004164 "diphthine synthase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0008168 "methyltransferase activity" evidence=IEA;ISS
GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS
GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA
DICTYBASE|DDB_G0276115 dph5 "diphthamide biosynthesis protein 5" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQL8 DPH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1916990 Dph5 "DPH5 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H2P9 DPH5 "Diphthine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S569 DPH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1307867 Dph5 "DPH5 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-85 dph5 "DPH5 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E982 DPH5 "Diphthine synthase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P418 DPH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CWQ0DPH5_MOUSE2, ., 1, ., 1, ., 9, 80.60210.95050.9572yesno
A0B879DPHB_METTP2, ., 1, ., 1, ., 9, 80.39700.86210.9207yesno
B9LV13DPHB_HALLT2, ., 1, ., 1, ., 9, 80.38090.86920.9283yesno
Q12XB4DPHB_METBU2, ., 1, ., 1, ., 9, 80.42850.86920.9213yesno
Q75JG8DPH5_DICDI2, ., 1, ., 1, ., 9, 80.59630.96110.9963yesno
Q18JS3DPHB_HALWD2, ., 1, ., 1, ., 9, 80.37160.80910.8807yesno
Q6C1E0DPH5_YARLI2, ., 1, ., 1, ., 9, 80.55910.95750.9033yesno
Q5V2B7DPHB_HALMA2, ., 1, ., 1, ., 9, 80.3750.87270.9536yesno
Q6MY91DPH5_ASPFU2, ., 1, ., 1, ., 9, 80.54160.91160.9052yesno
A6VJP1DPHB_METM72, ., 1, ., 1, ., 9, 80.40520.88330.9803yesno
C5A3K4DPHB_THEGJ2, ., 1, ., 1, ., 9, 80.44560.87270.9356yesno
Q0W085DPHB_UNCMA2, ., 1, ., 1, ., 9, 80.42750.86920.9571yesno
O27902DPHB_METTH2, ., 1, ., 1, ., 9, 80.37680.87270.9356yesno
Q8PUH9DPHB_METMA2, ., 1, ., 1, ., 9, 80.45420.86570.9210yesno
A6US81DPHB_METVS2, ., 1, ., 1, ., 9, 80.40140.88330.9803yesno
A2SQF6DPHB_METLZ2, ., 1, ., 1, ., 9, 80.39850.87270.9801yesno
Q8TR14DPHB_METAC2, ., 1, ., 1, ., 9, 80.45050.86570.9210yesno
Q9UZ31DPHB_PYRAB2, ., 1, ., 1, ., 9, 80.42690.87270.9427yesno
B6YXP9DPHB_THEON2, ., 1, ., 1, ., 9, 80.44190.87270.9356yesno
A4FYP1DPHB_METM52, ., 1, ., 1, ., 9, 80.40890.88330.9803yesno
Q6FXK9DPH5_CANGA2, ., 1, ., 1, ., 9, 80.58750.89390.8489yesno
Q58670DPHB_METJA2, ., 1, ., 1, ., 9, 80.43120.89040.9805yesno
A6UU49DPHB_META32, ., 1, ., 1, ., 9, 80.41260.88330.9727yesno
Q6CIZ1DPH5_KLULA2, ., 1, ., 1, ., 9, 80.57190.93630.8892yesno
Q2NFJ8DPHB_METST2, ., 1, ., 1, ., 9, 80.39920.87270.9391yesno
B8GIF8DPHB_METPE2, ., 1, ., 1, ., 9, 80.39110.86570.9760yesno
B0R4W9DPHB_HALS32, ., 1, ., 1, ., 9, 80.35400.85510.9307yesno
O74898DPH5_SCHPO2, ., 1, ., 1, ., 9, 80.57560.93630.9363yesno
Q5E982DPH5_BOVIN2, ., 1, ., 1, ., 9, 80.58570.95400.9473yesno
Q3IS55DPHB_NATPD2, ., 1, ., 1, ., 9, 80.35890.86570.9210yesno
P32469DPH5_YEAST2, ., 1, ., 1, ., 9, 80.57970.89390.8433yesno
Q6LZN6DPHB_METMP2, ., 1, ., 1, ., 9, 80.40800.87270.9686yesno
Q2FQ45DPHB_METHJ2, ., 1, ., 1, ., 9, 80.39050.85510.9603yesno
Q5BFG0DPH5_EMENI2, ., 1, ., 1, ., 9, 80.55590.92570.9192yesno
O81769DPH5_ARATH2, ., 1, ., 1, ., 9, 80.82720.95750.9783yesno
Q8U377DPHB_PYRFU2, ., 1, ., 1, ., 9, 80.43070.87270.9182yesno
Q59NX9DPH5_CANAL2, ., 1, ., 1, ., 9, 80.57600.95050.8996N/Ano
A9A6D8DPHB_METM62, ., 1, ., 1, ., 9, 80.39400.88330.9803yesno
O58456DPHB_PYRHO2, ., 1, ., 1, ., 9, 80.43650.87630.9358yesno
A3CWF9DPHB_METMJ2, ., 1, ., 1, ., 9, 80.39850.86920.984yesno
Q9HQK6DPHB_HALSA2, ., 1, ., 1, ., 9, 80.35400.85510.9307yesno
Q5JFE7DPHB_PYRKO2, ., 1, ., 1, ., 9, 80.44400.87630.9393yesno
O29866DPHB_ARCFU2, ., 1, ., 1, ., 9, 80.34440.82330.9282yesno
A7IA21DPHB_METB62, ., 1, ., 1, ., 9, 80.40670.85510.968yesno
Q467Z4DPHB_METBF2, ., 1, ., 1, ., 9, 80.46150.86570.9210yesno
Q7S949DPH5_NEUCR2, ., 1, ., 1, ., 9, 80.55830.92930.9163N/Ano
Q754E7DPH5_ASHGO2, ., 1, ., 1, ., 9, 80.57970.89390.8489yesno
Q6BN80DPH5_DEBHA2, ., 1, ., 1, ., 9, 80.58060.96110.9066yesno
Q4HZI0DPH5_GIBZE2, ., 1, ., 1, ., 9, 80.55830.92930.9163yesno
Q9H2P9DPH5_HUMAN2, ., 1, ., 1, ., 9, 80.59280.95400.9473yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.10.963
4th Layer2.1.1.980.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
PTZ00175270 PTZ00175, PTZ00175, diphthine synthase; Provisiona 1e-161
cd11647241 cd11647, Diphthine_synthase, Diphthine synthase, a 1e-141
COG1798260 COG1798, DPH5, Diphthamide biosynthesis methyltran 1e-111
PRK04160258 PRK04160, PRK04160, diphthine synthase; Provisiona 1e-106
TIGR00522257 TIGR00522, dph5, diphthine synthase 1e-100
cd09815224 cd09815, TP_methylase, S-AdoMet dependent tetrapyr 6e-19
pfam00590202 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porp 3e-15
COG2243234 COG2243, CobF, Precorrin-2 methylase [Coenzyme met 2e-09
PRK05576229 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methy 5e-09
TIGR01467230 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransf 1e-07
COG0313275 COG0313, COG0313, Predicted methyltransferases [Ge 7e-06
cd11644201 cd11644, Precorrin-6Y-methylase, Precorrin-6Y meth 3e-05
cd11645226 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methy 4e-05
COG1010249 COG1010, CobJ, Precorrin-3B methylase [Coenzyme me 4e-05
cd11724255 cd11724, TP_methylase_like, Uncharacterized subfam 9e-05
PRK05787210 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methy 2e-04
COG3956 488 COG3956, COG3956, Protein containing tetrapyrrole 3e-04
cd11723220 cd11723, YabN_N, N-terminal S-AdoMet dependent met 3e-04
COG2241210 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme 4e-04
TIGR01466239 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltrans 0.002
>gnl|CDD|185500 PTZ00175, PTZ00175, diphthine synthase; Provisional Back     alignment and domain information 
 Score =  448 bits (1155), Expect = e-161
 Identities = 182/273 (66%), Positives = 218/273 (79%), Gaps = 5/273 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DIT++GLEAVK  D VY+E+YTS+L    + +    LE+ YGKP+  
Sbjct: 2   MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSIL-INSNKE---KLEEFYGKPVIE 57

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEE  D+IL E++E NVAFLVVGDPF ATTHTDL +RAKK GI+V+ +HNAS+MN
Sbjct: 58  ADREMVEEGCDEILEEAKEKNVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMN 117

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G  GLQLYRFGETVSIPFFTETW+P SFY+KIK NR  GLHTLCLLDI+VKE S+E+L
Sbjct: 118 AIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDNGLHTLCLLDIKVKERSVENL 177

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRL 240
            +G+K+YEPPRYMT+N AIEQLLEVE  +G  V  EDTL VG AR+GS+DQ IV+GT+  
Sbjct: 178 MKGRKIYEPPRYMTINQAIEQLLEVEEKKGGGVIAEDTLVVGVARVGSDDQQIVSGTLED 237

Query: 241 LQMVDFGAPLHCLVIVGET-HPVEEEMLDFYRL 272
           L  VDFG PLH LVI   T H +EEE  + YR+
Sbjct: 238 LLDVDFGPPLHSLVICAPTLHDIEEEFFELYRI 270

Length = 270
>gnl|CDD|212506 cd11647, Diphthine_synthase, Diphthine synthase, also known as DPH5 Back     alignment and domain information
>gnl|CDD|224711 COG1798, DPH5, Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235231 PRK04160, PRK04160, diphthine synthase; Provisional Back     alignment and domain information
>gnl|CDD|233007 TIGR00522, dph5, diphthine synthase Back     alignment and domain information
>gnl|CDD|212499 cd09815, TP_methylase, S-AdoMet dependent tetrapyrrole methylases Back     alignment and domain information
>gnl|CDD|216012 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases Back     alignment and domain information
>gnl|CDD|225152 COG2243, CobF, Precorrin-2 methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235512 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methyltransferase; Validated Back     alignment and domain information
>gnl|CDD|233425 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransferase Back     alignment and domain information
>gnl|CDD|223390 COG0313, COG0313, Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>gnl|CDD|212503 cd11644, Precorrin-6Y-methylase, Precorrin-6Y methyltransferase, the cobalamin biosynthesis enzyme CbiE Back     alignment and domain information
>gnl|CDD|212504 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL Back     alignment and domain information
>gnl|CDD|223942 COG1010, CobJ, Precorrin-3B methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|212510 cd11724, TP_methylase_like, Uncharacterized subfamily of S-AdoMet dependent tetrapyrrole methylases Back     alignment and domain information
>gnl|CDD|235609 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methyltransferase; Validated Back     alignment and domain information
>gnl|CDD|226465 COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|212509 cd11723, YabN_N, N-terminal S-AdoMet dependent methylase domain of Bacillus subtilis YabN and related proteins Back     alignment and domain information
>gnl|CDD|225150 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|233424 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 283
PTZ00175270 diphthine synthase; Provisional 100.0
KOG3123272 consensus Diphthine synthase [Translation, ribosom 100.0
TIGR00522257 dph5 diphthine synthase. This protein participates 100.0
COG1798260 DPH5 Diphthamide biosynthesis methyltransferase [T 100.0
PRK04160258 diphthine synthase; Provisional 100.0
COG2875254 CobM Precorrin-4 methylase [Coenzyme metabolism] 100.0
PRK06136249 uroporphyrin-III C-methyltransferase; Reviewed 100.0
COG2243234 CobF Precorrin-2 methylase [Coenzyme metabolism] 100.0
PRK05948238 precorrin-2 methyltransferase; Provisional 100.0
TIGR01465229 cobM_cbiF precorrin-4 C11-methyltransferase. This 100.0
COG2241210 CobL Precorrin-6B methylase 1 [Coenzyme metabolism 100.0
PRK15473257 cbiF cobalt-precorrin-4 C(11)-methyltransferase; P 100.0
PRK05990241 precorrin-2 C(20)-methyltransferase; Reviewed 100.0
TIGR01469236 cobA_cysG_Cterm uroporphyrin-III C-methyltransfera 100.0
TIGR01467230 cobI_cbiL precorrin-2 C20-methyltransferase. This 100.0
PLN02625263 uroporphyrin-III C-methyltransferase 100.0
COG0007244 CysG Uroporphyrinogen-III methylase [Coenzyme meta 100.0
PRK05787210 cobalt-precorrin-6Y C(5)-methyltransferase; Valida 100.0
PRK15478241 cbiH cobalt-precorrin-3B C(17)-methyltransferase; 100.0
PRK05576229 cobalt-precorrin-2 C(20)-methyltransferase; Valida 100.0
PRK10637457 cysG siroheme synthase; Provisional 100.0
PF00590210 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Meth 100.0
PRK05765246 precorrin-3B C17-methyltransferase; Provisional 100.0
COG1010249 CobJ Precorrin-3B methylase [Coenzyme metabolism] 100.0
TIGR01466239 cobJ_cbiH precorrin-3B C17-methyltransferase. This 100.0
PRK05991250 precorrin-3B C17-methyltransferase; Provisional 100.0
PRK07168 474 bifunctional uroporphyrinogen-III methyltransferas 100.0
TIGR02467204 CbiE precorrin-6y C5,15-methyltransferase (decarbo 100.0
PRK08284253 precorrin 6A synthase; Provisional 99.98
TIGR02434249 CobF precorrin-6A synthase (deacetylating). This m 99.97
PRK14994287 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O- 99.97
KOG1527506 consensus Uroporphyrin III methyltransferase [Coen 99.94
COG0313275 Predicted methyltransferases [General function pre 99.89
TIGR00096276 probable S-adenosylmethionine-dependent methyltran 99.87
COG3956 488 Protein containing tetrapyrrole methyltransferase 99.53
>PTZ00175 diphthine synthase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3e-53  Score=375.02  Aligned_cols=267  Identities=68%  Similarity=1.072  Sum_probs=239.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHhhCCEEEEcCcccccccCCCcchhhhhHHHhCCCccccchhhHHHHHHHHHHhccCC
Q 023387            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (283)
Q Consensus         1 ml~iVG~GPG~~d~lT~~A~~~L~~aDvv~~~~~~~~l~~~i~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~i~~~~~~~   80 (283)
                      |||+||+|||||++||+||+++|++||+|+++.+++.+.. ...+.   ++.+.+++....+++.+++.++.+++.++++
T Consensus         2 mlylVG~GpGdp~lLTlkal~~L~~ADvV~~d~~ts~l~~-~~~~~---l~~~~gk~~~~~~r~~~e~~~~~ii~~a~~~   77 (270)
T PTZ00175          2 MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSILIN-SNKEK---LEEFYGKPVIEADREMVEEGCDEILEEAKEK   77 (270)
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEecccchhcc-CCHHH---HHHhcCCeeEecCccCHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999999999998775511 12222   5555565544444555655566777777778


Q ss_pred             CEEEEecCCCCCCccHHHHHHHHHhCCCcEEEEcCCchHhHHHHcCCccccCCceeEEecccCCCCCCchhHHHHhhhcc
Q 023387           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (283)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~l~~~~~~veiiPGISS~~a~a~~g~pl~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~  160 (283)
                      +||+|++|||++|+++.+++..+.+.|+++++|||+|+++|++.+|+|++++|.+++|+|.+.||.|.++++.++.|...
T Consensus        78 ~Vv~L~~GDP~i~~t~~~l~~~~~~~gi~vevIPGvSi~sA~~~~Gl~~~~fg~~~sv~~~t~~~~~~s~~~~i~~n~~~  157 (270)
T PTZ00175         78 NVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDN  157 (270)
T ss_pred             CEEEEECCCCCccCCHHHHHHHHHHCCCcEEEECCcCHHHHHhhcCCCcCCCCceEEEEEEeCCCCCCChhHHHHHHHHc
Confidence            99999999999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             CccceEeeecccccchhhhhhcCccccCCcccccHHHHHHHHHHHHHHcCCCCCCCCceEEEEeccCCCCeEEEEEehhc
Q 023387          161 GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRL  240 (283)
Q Consensus       161 ~~~~~~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~e~~~~~g~~~~~~~~~v~v~e~lg~~~E~i~~~tl~e  240 (283)
                      |+||++|+|.+.++.+++++++++..|+++.||++.+.+++|.++.++++.++++++++++++.|+|+++|+|..|++++
T Consensus       158 glhTl~lldi~~~~~~~~~~~~~~~~~~~~~~M~~~~a~~~l~~i~~~~~~~~~~~~t~~v~v~r~g~~~q~i~~gtL~~  237 (270)
T PTZ00175        158 GLHTLCLLDIKVKERSVENLMKGRKIYEPPRYMTINQAIEQLLEVEEKKGGGVIAEDTLVVGVARVGSDDQQIVSGTLED  237 (270)
T ss_pred             CCceEEEEeeeccccchhhhhccccccCCCcCCCHHHHHHHHHHHHHHHhcCCCCCCCeEEEEEECCCCCceEEEEEHHH
Confidence            99999999999888899999999999999999999999999999988777678899999999999999999999999999


Q ss_pred             hhhhhcCCCceEEEEeCC-CChhHHHHHhhcc
Q 023387          241 LQMVDFGAPLHCLVIVGE-THPVEEEMLDFYR  271 (283)
Q Consensus       241 l~~~~~~~~~~sliI~~~-~~~~~~~~~~~~~  271 (283)
                      +.+.+|+.+++++||+|+ +|++|.|+|+.|.
T Consensus       238 l~~~d~g~PlhsLIv~g~~Lh~~E~e~l~~~~  269 (270)
T PTZ00175        238 LLDVDFGPPLHSLVICAPTLHDIEEEFFELYR  269 (270)
T ss_pred             HhhcccCCCCEEEEEECCcCCHHHHHHHHHhh
Confidence            998889999999999997 9999999999986

>KOG3123 consensus Diphthine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00522 dph5 diphthine synthase Back     alignment and domain information
>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04160 diphthine synthase; Provisional Back     alignment and domain information
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK06136 uroporphyrin-III C-methyltransferase; Reviewed Back     alignment and domain information
>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK05948 precorrin-2 methyltransferase; Provisional Back     alignment and domain information
>TIGR01465 cobM_cbiF precorrin-4 C11-methyltransferase Back     alignment and domain information
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism] Back     alignment and domain information
>PRK15473 cbiF cobalt-precorrin-4 C(11)-methyltransferase; Provisional Back     alignment and domain information
>PRK05990 precorrin-2 C(20)-methyltransferase; Reviewed Back     alignment and domain information
>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase Back     alignment and domain information
>TIGR01467 cobI_cbiL precorrin-2 C20-methyltransferase Back     alignment and domain information
>PLN02625 uroporphyrin-III C-methyltransferase Back     alignment and domain information
>COG0007 CysG Uroporphyrinogen-III methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK05787 cobalt-precorrin-6Y C(5)-methyltransferase; Validated Back     alignment and domain information
>PRK15478 cbiH cobalt-precorrin-3B C(17)-methyltransferase; Provisional Back     alignment and domain information
>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>PF00590 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Methylases Note this Prosite entry does not include all members of this family Back     alignment and domain information
>PRK05765 precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism] Back     alignment and domain information
>TIGR01466 cobJ_cbiH precorrin-3B C17-methyltransferase Back     alignment and domain information
>PRK05991 precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed Back     alignment and domain information
>TIGR02467 CbiE precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Back     alignment and domain information
>PRK08284 precorrin 6A synthase; Provisional Back     alignment and domain information
>TIGR02434 CobF precorrin-6A synthase (deacetylating) Back     alignment and domain information
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional Back     alignment and domain information
>KOG1527 consensus Uroporphyrin III methyltransferase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG0313 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family Back     alignment and domain information
>COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
3i4t_A292 Crystal Structure Of Putative Diphthine Synthase Fr 2e-80
2dv4_A265 Crystal Structure Of Leu65 To Gln Mutant Of Diphthi 5e-50
2ehc_A265 Crystal Structure Of Asn69 To Lys Mutant Of Diphthi 5e-50
2dv3_A265 Crystal Structure Of Leu65 To Arg Mutant Of Diphthi 8e-50
2egl_A265 Crystal Structure Of Glu171 To Lys Mutant Of Diphth 9e-50
2dv5_A265 Crystal Structure Of Leu65 To Ala Mutant Of Diphthi 9e-50
2e17_A265 Crystal Structure Of Arg173 To Ala Mutant Of Diphth 1e-49
2egb_A265 Crystal Structure Of Glu140 To Asn Mutant Of Diphth 1e-49
2eh2_A265 Mutant V18m Structure Of Ph0725 From Pyrococcus Hor 1e-49
2pcg_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 1e-49
2pb5_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 1e-49
2emr_A265 Mutant L65m Structure Of Ph0725 From Pyrococcus Hor 1e-49
2p9d_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2el3_A265 Structural Study Of Project Id Ph0725 From Pyrococc 2e-49
2e08_A265 Crystal Structure Of Glu140 To Lys Mutant Of Diphth 2e-49
2p5f_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2dxw_A265 Crystal Structure Of Glu54 To Lys Mutant Of Diphthi 2e-49
2dsi_A265 Crystal Structure Of Glu171 To Arg Mutant Of Diphth 2e-49
2el2_A265 Structural Study Of Project Id Ph0725 From Pyrococc 2e-49
2eh5_A265 Mutant L184m Structure Of Ph0725 From Pyrococcus Ho 2e-49
2hr8_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2e15_A265 Crystal Structure Of Arg173 To Asn Mutant Of Diphth 2e-49
2ek2_A265 Structural Study Of Project Id Ph0725 From Pyrococc 2e-49
2ed3_A265 Mutant I127m Structure Of Ph0725 From Pyrococcus Ho 2e-49
2egs_A265 Crystal Structure Of Leu261 To Met Mutant Of Diphth 2e-49
2en5_A265 Mutant R262h Structure Of Ph0725 From Pyrococcus Ho 2e-49
1wng_A265 Structural Study Of Project Id Ph0725 From Pyrococc 2e-49
2p6i_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2e8h_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2e16_A265 Crystal Structure Of Glu140 To Arg Mutant Of Diphth 2e-49
2eeq_A265 Mutant Y29m Structure Of Ph0725 From Pyrococcus Hor 2e-49
2pck_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2e4n_A265 Mutant V251m Structure Of Ph0725 From Pyrococcus Ho 2e-49
2ejz_A265 Structural Study Of Project Id Ph0725 From Pyrococc 2e-49
2dxv_A265 Crystal Structure Of Glu54 To His Mutant Of Diphthi 2e-49
2owg_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2e4r_A265 Mutant I253m Structure Of Ph0725 From Pyrococcus Ho 2e-49
2pch_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2p5c_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2pb6_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-49
2dv7_A265 Crystal Structure Of Lys187 To Arg Mutant Of Diphth 2e-49
2ehl_A265 Crystal Structure Of Thr146 To Arg Mutant Of Diphth 2e-49
2e7r_A265 Crystal Structure Of Glu54 To Arg Mutant Of Diphthi 2e-49
2eh4_A265 Mutant T146m Structure Of Ph0725 From Pyrococcus Ho 3e-49
2owu_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-49
2dxx_A265 Crystal Structure Of Asn142 To Glu Mutant Of Diphth 3e-49
2pcm_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-49
2pca_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-49
2eld_A265 Mutant L160m Structure Of Ph0725 From Pyrococcus Ho 3e-49
2el1_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-49
2el0_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-49
2eka_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-49
2ek7_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-49
2ek4_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-49
2ek3_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-49
2ejk_A265 Mutant L38m Structure Of Ph0725 From Pyrococcus Hor 3e-49
2e07_A265 Crystal Structure Of Asp79 To Glu Mutant Of Diphthi 3e-49
2hut_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-49
2huq_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-49
2p6k_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-49
2z6r_A265 Crystal Structure Of Lys49 To Arg Mutant Of Diphthi 4e-49
2dsg_A265 Crystal Structure Of Lys26 To Arg Mutant Of Diphthi 4e-49
2e8s_A265 Structural Study Of Project Id Ph0725 From Pyrococc 4e-49
2ele_A265 Mutant V18c Structure Of Ph0725 From Pyrococcus Hor 5e-49
2pb4_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-49
2owv_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-49
2ejj_A265 Mutant K129m Structure Of Ph0725 From Pyrococcus Ho 6e-49
2e8q_A265 Structural Study Of Project Id Ph0725 From Pyrococc 6e-49
2eni_A265 Mutant F197m Structure Of Ph0725 From Pyrococcus Ho 8e-49
2huv_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 9e-49
2ed5_A265 Mutant S147m Structure Of Ph0725 From Pyrococcus Ho 1e-48
2emu_A265 Mutant L21h Structure Of Ph0725 From Pyrococcus Hor 1e-48
2e8r_A265 Structural Study Of Project Id Ph0725 From Pyrococc 1e-48
2dsh_A265 Crystal Structure Of Lys26 To Tyr Mutant Of Diphthi 1e-48
2p6d_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 1e-48
2p2x_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-48
2hux_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-48
1vce_A265 Crystal Structure Of Project Id Ph0725 From Pyrococ 4e-48
2owf_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 8e-48
1vhv_A268 Crystal Structure Of Diphthine Synthase Length = 26 3e-32
1wde_A294 Crystal Structure Of The Conserved Hypothetical Pro 1e-17
>pdb|3I4T|A Chain A, Crystal Structure Of Putative Diphthine Synthase From Entamoeba Histolytica Length = 292 Back     alignment and structure 
Iteration: 1

 Score =  295 bits (755), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 141/255 (55%), Positives = 186/255 (72%), Gaps = 5/255 (1%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGL DE+DIT+RGLEAVK CD V++E YT++L   ++      LE+ YGK + +
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCDVAK-----LEEFYGKKVII 76
Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DR++VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MN
Sbjct: 77  GDRDLVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMN 136
Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G  GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LLDI+VKE S ES+
Sbjct: 137 AIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESI 196
Query: 181 CRGKKLYEPPRYMTVNIAIXXXXXXXXXXXXSVYNEDTLCVGFARLGSEDQMIVAGTMRL 240
            +G+ ++EPPRYMT+N  I             VY+EDT+ VG AR+   DQ IV G M+ 
Sbjct: 197 IKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKD 256
Query: 241 LQMVDFGAPLHCLVI 255
           L   DFGAP+HCL+I
Sbjct: 257 LLHYDFGAPMHCLLI 271
>pdb|2DV4|A Chain A, Crystal Structure Of Leu65 To Gln Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EHC|A Chain A, Crystal Structure Of Asn69 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DV3|A Chain A, Crystal Structure Of Leu65 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EGL|A Chain A, Crystal Structure Of Glu171 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DV5|A Chain A, Crystal Structure Of Leu65 To Ala Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2E17|A Chain A, Crystal Structure Of Arg173 To Ala Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EGB|A Chain A, Crystal Structure Of Glu140 To Asn Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EH2|A Chain A, Mutant V18m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PB5|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EMR|A Chain A, Mutant L65m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P9D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EL3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L242m) Length = 265 Back     alignment and structure
>pdb|2E08|A Chain A, Crystal Structure Of Glu140 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2P5F|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DXW|A Chain A, Crystal Structure Of Glu54 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DSI|A Chain A, Crystal Structure Of Glu171 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EL2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (l185m) Length = 265 Back     alignment and structure
>pdb|2EH5|A Chain A, Mutant L184m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HR8|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E15|A Chain A, Crystal Structure Of Arg173 To Asn Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EK2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (E140m) Length = 265 Back     alignment and structure
>pdb|2ED3|A Chain A, Mutant I127m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EGS|A Chain A, Crystal Structure Of Leu261 To Met Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EN5|A Chain A, Mutant R262h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|1WNG|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P6I|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E8H|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E16|A Chain A, Crystal Structure Of Glu140 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EEQ|A Chain A, Mutant Y29m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCK|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E4N|A Chain A, Mutant V251m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EJZ|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (y11m) Length = 265 Back     alignment and structure
>pdb|2DXV|A Chain A, Crystal Structure Of Glu54 To His Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2OWG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E4R|A Chain A, Mutant I253m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCH|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P5C|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PB6|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DV7|A Chain A, Crystal Structure Of Lys187 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EHL|A Chain A, Crystal Structure Of Thr146 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2E7R|A Chain A, Crystal Structure Of Glu54 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EH4|A Chain A, Mutant T146m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2OWU|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DXX|A Chain A, Crystal Structure Of Asn142 To Glu Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2PCM|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCA|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2ELD|A Chain A, Mutant L160m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EL1|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L44m) Length = 265 Back     alignment and structure
>pdb|2EL0|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L21m) Length = 265 Back     alignment and structure
>pdb|2EKA|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L202m) Length = 265 Back     alignment and structure
>pdb|2EK7|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L163m) Length = 265 Back     alignment and structure
>pdb|2EK4|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L8m) Length = 265 Back     alignment and structure
>pdb|2EK3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L3m) Length = 265 Back     alignment and structure
>pdb|2EJK|A Chain A, Mutant L38m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E07|A Chain A, Crystal Structure Of Asp79 To Glu Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2HUT|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HUQ|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P6K|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2Z6R|A Chain A, Crystal Structure Of Lys49 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DSG|A Chain A, Crystal Structure Of Lys26 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2E8S|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2ELE|A Chain A, Mutant V18c Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PB4|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2OWV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EJJ|A Chain A, Mutant K129m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E8Q|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (K19m) Length = 265 Back     alignment and structure
>pdb|2ENI|A Chain A, Mutant F197m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HUV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2ED5|A Chain A, Mutant S147m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EMU|A Chain A, Mutant L21h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E8R|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DSH|A Chain A, Crystal Structure Of Lys26 To Tyr Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2P6D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P2X|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HUX|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|1VCE|A Chain A, Crystal Structure Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2OWF|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|1VHV|A Chain A, Crystal Structure Of Diphthine Synthase Length = 268 Back     alignment and structure
>pdb|1WDE|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein Ape0931 From Aeropyrum Pernix K1 Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
3i4t_A292 Diphthine synthase; niaid, ssgcid, infectious dise 1e-102
2z6r_A265 Diphthine synthase; methyltransferase, S-adenosyl- 2e-93
1wde_A294 Probable diphthine synthase; structural genomics, 3e-89
1vhv_A268 Diphthine synthase; structural genomics, transfera 6e-87
2qbu_A232 Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me 2e-06
2bb3_A221 Cobalamin biosynthesis precorrin-6Y methylase (CB; 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
2npn_A251 Putative cobalamin synthesis related protein; COBF 8e-06
2e0n_A259 Precorrin-2 C20-methyltransferase; cobalt-factor I 4e-05
3nd1_A275 Precorrin-6A synthase/COBF protein; methyltransfer 5e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 4e-04
3nut_A251 Precorrin-3 methylase; vitamin B12 pathway, cobala 4e-04
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Length = 292 Back     alignment and structure
 Score =  299 bits (767), Expect = e-102
 Identities = 151/272 (55%), Positives = 201/272 (73%), Gaps = 6/272 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGL DE+DIT+RGLEAVK CD V++E YT++L        ++ LE+ YGK + +
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQ-----CDVAKLEEFYGKKVII 76

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DR++VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MN
Sbjct: 77  GDRDLVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMN 136

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G  GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LLDI+VKE S ES+
Sbjct: 137 AIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESI 196

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRL 240
            +G+ ++EPPRYMT+N  IEQLLEVE  Q   VY+EDT+ VG AR+   DQ IV G M+ 
Sbjct: 197 IKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKD 256

Query: 241 LQMVDFGAPLHCLVIVGET-HPVEEEMLDFYR 271
           L   DFGAP+HCL+I        E + L++++
Sbjct: 257 LLHYDFGAPMHCLLIPAPQVDDPELDQLEYFK 288
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Length = 265 Back     alignment and structure
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Length = 294 Back     alignment and structure
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 268 Back     alignment and structure
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 232 Back     alignment and structure
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Length = 251 Back     alignment and structure
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Length = 259 Back     alignment and structure
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Length = 275 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Length = 251 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
3i4t_A292 Diphthine synthase; niaid, ssgcid, infectious dise 100.0
2z6r_A265 Diphthine synthase; methyltransferase, S-adenosyl- 100.0
1vhv_A268 Diphthine synthase; structural genomics, transfera 100.0
1wde_A294 Probable diphthine synthase; structural genomics, 100.0
4e16_A253 Precorrin-4 C(11)-methyltransferase; structural ge 100.0
1cbf_A285 Cobalt-precorrin-4 transmethylase; precorrin-4 met 100.0
1s4d_A280 Uroporphyrin-III C-methyltransferase; tetrapyrrole 100.0
3ndc_A264 Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH 100.0
1ve2_A235 Uroporphyrin-III C-methyltransferase; heme, biosyn 100.0
2ybo_A294 Methyltransferase; SUMT, NIRE, heme D1 biosynthesi 100.0
1va0_A239 Uroporphyrin-III C-methyltransferase; structural g 100.0
3nut_A251 Precorrin-3 methylase; vitamin B12 pathway, cobala 100.0
1pjq_A457 CYSG, siroheme synthase; rossman fold, nucleotide 100.0
2qbu_A232 Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me 100.0
2e0n_A259 Precorrin-2 C20-methyltransferase; cobalt-factor I 100.0
2zvb_A295 Precorrin-3 C17-methyltransferase; plasmid, struct 100.0
1wyz_A242 Putative S-adenosylmethionine-dependent methyltra; 100.0
3kwp_A296 Predicted methyltransferase; putative methyltransf 99.98
2npn_A251 Putative cobalamin synthesis related protein; COBF 99.97
2bb3_A221 Cobalamin biosynthesis precorrin-6Y methylase (CB; 99.97
3nd1_A275 Precorrin-6A synthase/COBF protein; methyltransfer 99.96
3hh1_A117 Tetrapyrrole methylase family protein; chlorobium 99.89
3ffy_A115 Putative tetrapyrrole (corrin/porphyrin) methylas; 98.86
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Back     alignment and structure
Probab=100.00  E-value=2e-48  Score=347.85  Aligned_cols=268  Identities=56%  Similarity=0.945  Sum_probs=214.5

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHhhCCEEEEcCcccccccCCCcchhhhhHHHhCCCccccchhhHHHHHHHHHHhccCC
Q 023387            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (283)
Q Consensus         1 ml~iVG~GPG~~d~lT~~A~~~L~~aDvv~~~~~~~~l~~~i~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~i~~~~~~~   80 (283)
                      |||+||+||||+++||++|+++|++||+|+|+.+++..  ....+.   ++.+.++++...++..++++.+.+++.++++
T Consensus        22 ~l~lVG~GpGd~~~LT~rA~~~L~~ADvV~~e~~~s~~--~~~~~~---L~~~~~~~~i~~~~~~~~~~~~~i~~~a~~~   96 (292)
T 3i4t_A           22 MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAIL--QCDVAK---LEEFYGKKVIIGDRDLVETEADQILEPAKTK   96 (292)
T ss_dssp             EEEEEECBSSSGGGSCHHHHHHHHHCSEEEECGGGGGS--SSCHHH---HHHHHTSCCEEC-------CCCTTHHHHTTS
T ss_pred             EEEEEEECCCChHHhhHHHHHHHHhCCEEEEecccccc--cCCHHH---HHhCCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence            69999999999999999999999999999998865432  012333   5555555554434444555566677777669


Q ss_pred             CEEEEecCCCCCCccHHHHHHHHHhCCCcEEEEcCCchHhHHHHcCCccccCCceeEEecccCCCCCCchhHHHHhhhcc
Q 023387           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (283)
Q Consensus        81 ~V~~l~~GDP~~~~~~~~l~~~l~~~~~~veiiPGISS~~a~a~~g~pl~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~  160 (283)
                      +||+|++|||++|+++.++++.+.+.|+++++||||||++|+|++|+||++++.+.++.+.+.|++|.++++.+..+...
T Consensus        97 ~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p~~~~~~~~~~l~~  176 (292)
T 3i4t_A           97 NVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDN  176 (292)
T ss_dssp             EEEEEESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCCCTHHHHHHHHHHT
T ss_pred             CEEEEecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCCCccHHHHHHHhhc
Confidence            99999999999999999999999888999999999999997789999999999999999999999998777888878888


Q ss_pred             CccceEeeecccccchhhhhhcCccccCCcccccHHHHHHHHHHHHHHcCCCCCCCCceEEEEeccCCCCeEEEEEehhc
Q 023387          161 GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMRL  240 (283)
Q Consensus       161 ~~~~~~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~e~~~~~g~~~~~~~~~v~v~e~lg~~~E~i~~~tl~e  240 (283)
                      +.||++++|...++.+++++++++.+|+++.+|.+.++++.|.++.+.+...++++++++++++++|+++|+++.+|+++
T Consensus       177 ~~~Tlvl~d~~~~e~~~~~~~~~~~~y~p~r~m~~~~~~~~L~~~~~~l~~~g~~~dtpv~vv~~~t~~~E~i~~~tL~~  256 (292)
T 3i4t_A          177 NMHTLVLLDIKVKERSEESIIKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKD  256 (292)
T ss_dssp             TCBEEEEECEECCC-------------CCCEECCHHHHHHHHHHHHHHHCCCSCCTTCEEEEEESTTSTTCEEEEEEHHH
T ss_pred             CCCeEEEEeccccccchhhccccccccCCccccCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeecCCCceEEEEEEHHH
Confidence            89999999999888889999999999999989999999999988655444457888999999999999999999999999


Q ss_pred             hhhhhcCCCceEEEEeCC-CChhHHHHHhhccCC
Q 023387          241 LQMVDFGAPLHCLVIVGE-THPVEEEMLDFYRLT  273 (283)
Q Consensus       241 l~~~~~~~~~~sliI~~~-~~~~~~~~~~~~~~~  273 (283)
                      +.+.+++.+.++++|+|+ +|++|.|+|++|..+
T Consensus       257 l~~~~~~~~~~~liivG~~l~~~e~e~l~~~~~~  290 (292)
T 3i4t_A          257 LLHYDFGAPMHCLLIPAPQVDDPELDQLEYFKYK  290 (292)
T ss_dssp             HTTCCCCSSCEEEEECCSSCCHHHHHHHGGGBCC
T ss_pred             HHhhhcCCCCCEEEEECCcCCHHHHHHHHHhccC
Confidence            988777677899999995 999999999999764
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Back     alignment and structure
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Back     alignment and structure
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Back     alignment and structure
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile} Back     alignment and structure
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A* Back     alignment and structure
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1 Back     alignment and structure
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A Back     alignment and structure
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1 Back     alignment and structure
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A* Back     alignment and structure
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A Back     alignment and structure
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Back     alignment and structure
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Back     alignment and structure
>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A* Back     alignment and structure
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1 Back     alignment and structure
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367} Back     alignment and structure
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Back     alignment and structure
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Back     alignment and structure
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Back     alignment and structure
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 283
d2deka1265 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyroc 3e-65
d1wdea_289 c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum 2e-62
d1vhva_251 c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon A 4e-57
d1pjqa2242 c.90.1.1 (A:216-457) Siroheme synthase CysG, domai 6e-12
d1s4da_265 c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase 9e-12
d1cbfa_239 c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase 2e-10
d1ve2a1235 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransf 1e-09
d1va0a1225 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 { 3e-08
d2bb3a1195 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Ar 2e-07
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Length = 265 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  203 bits (516), Expect = 3e-65
 Identities = 115/268 (42%), Positives = 161/268 (60%), Gaps = 20/268 (7%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57

Query: 61  ADREMVEEKADKILSES-QESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I+    +E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++     
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKR---- 173

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMR 239
                       YMT N A+E LL+VE ++   V+ +DTL V  AR GS +  I AG ++
Sbjct: 174 -----------MYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVK 222

Query: 240 LLQMVDFGAPLHCLVIVGETHPVEEEML 267
            L   DFG P H L++ G+ H VE E L
Sbjct: 223 DLIREDFGDPPHILIVPGKLHIVEAEYL 250
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Length = 289 Back     information, alignment and structure
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 251 Back     information, alignment and structure
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Length = 242 Back     information, alignment and structure
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Length = 265 Back     information, alignment and structure
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Length = 239 Back     information, alignment and structure
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Length = 235 Back     information, alignment and structure
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Length = 225 Back     information, alignment and structure
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Length = 195 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
d2deka1265 Diphthine synthase, DphB {Pyrococcus horikoshii [T 100.0
d1vhva_251 Diphthine synthase, DphB {Archaeon Archaeoglobus f 100.0
d1wdea_289 Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 100.0
d1ve2a1235 Uroporphyrin-III C-methyltransferase (SUMT, UROM, 100.0
d1s4da_265 Uroporphyrin-III C-methyltransferase (SUMT, UROM, 100.0
d1cbfa_239 Cobalt precorrin-4 methyltransferase CbiF {Bacillu 100.0
d1pjqa2242 Siroheme synthase CysG, domains 4 and 5 {Salmonell 100.0
d2bb3a1195 Precorrin-6y methylase CbiE {Archaeoglobus fulgidu 99.97
d1va0a1225 Hypothetical protein TTHA0667 {Thermus thermophilu 99.96
d1wyza1233 Putative methytransferase BT4190 {Bacteroides thet 99.93
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=3e-45  Score=322.41  Aligned_cols=254  Identities=46%  Similarity=0.717  Sum_probs=210.5

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHhhCCEEEEcCcccccccCCCcchhhhhHHHhCCCccccchhhHHHHHHHHHHh-ccC
Q 023387            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSE-SQE   79 (283)
Q Consensus         1 ml~iVG~GPG~~d~lT~~A~~~L~~aDvv~~~~~~~~l~~~i~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~i~~~-~~~   79 (283)
                      |||+||+||||||+||+||+++|++||+|+|+++++.+    .....+.+..+.+++.....+..+++..++++.. +++
T Consensus         2 ~Ly~VG~GPG~pe~lT~~A~~~l~~aDvV~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (265)
T d2deka1           2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLM----AGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKE   77 (265)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC----TTCCHHHHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHCCCEEEECCCCCcc----cHHHHHHHHHhcCCceeccCcchHHHHHHHHHHHHHcC
Confidence            79999999999999999999999999999999877644    2223333555556555444444555554555544 455


Q ss_pred             CCEEEEecCCCCCCccHHHHHHHHHhCCCcEEEEcCCchHhHHHHcCCccccCCceeEEecccCCCCCCchhHHHHhhhc
Q 023387           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (283)
Q Consensus        80 ~~V~~l~~GDP~~~~~~~~l~~~l~~~~~~veiiPGISS~~a~a~~g~pl~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~  159 (283)
                      ++|++|++|||++|+++.++++.+.+.|++++|+|||||++|+|++|.+....+...++++.+.++.|.+..+++..+..
T Consensus        78 ~~V~~l~~GDP~~~~~~~~l~~~~~~~~i~vevvPGiSs~~Aaaa~g~~~~~~~~~~s~~~~~~~~~~~~~~e~i~~~~~  157 (265)
T d2deka1          78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE  157 (265)
T ss_dssp             SEEEEEESBCTTTTSSTHHHHHHHHHTTCEEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred             CCEEEEecCccccchhHHHHHHHHHhcCCCceecCCccHHHHHHHhCCCccccCceEEEEEeecCCcCCcchhhHHHHHH
Confidence            99999999999999999999999999999999999999998887777777777889999888888888888888888888


Q ss_pred             cCccceEeeecccccchhhhhhcCccccCCcccccHHHHHHHHHHHHHHcCCCCCCCCceEEEEeccCCCCeEEEEEehh
Q 023387          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESVYNEDTLCVGFARLGSEDQMIVAGTMR  239 (283)
Q Consensus       160 ~~~~~~~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~e~~~~~g~~~~~~~~~v~v~e~lg~~~E~i~~~tl~  239 (283)
                      .+++++++++...               .+..+|.+.+....|.++.+.+...++++++++++++|+|+|+|+|+.+|++
T Consensus       158 ~~~~~~~~~~~~~---------------~~~~~~~~~~a~~~L~ei~~~l~~~g~~~dtpv~v~~~~g~~dE~i~~gtL~  222 (265)
T d2deka1         158 RGLHTLLFLDIKA---------------EKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVK  222 (265)
T ss_dssp             HTCBEEEEECEEG---------------GGTEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEESTTSSSCEEEEEEHH
T ss_pred             cCCchhhhhhhcC---------------cccEEecHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCCCCeEEEEEEHH
Confidence            8888888776532               1245788888888888888877766899999999999999999999999999


Q ss_pred             chhhhhcCCCceEEEEeCCCChhHHHHHhhccCC
Q 023387          240 LLQMVDFGAPLHCLVIVGETHPVEEEMLDFYRLT  273 (283)
Q Consensus       240 el~~~~~~~~~~sliI~~~~~~~~~~~~~~~~~~  273 (283)
                      |+.+.+|+.++.++||+|+.|+.|+|+|+.+-..
T Consensus       223 el~~~d~~~~~~~lII~g~~~~~e~e~l~~~~~~  256 (265)
T d2deka1         223 DLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGA  256 (265)
T ss_dssp             HHTTCCCCSSCEEEEECCSCCHHHHHHHHHHHCC
T ss_pred             HHHhhhcCCCCeEEEEEccCcHHHHHHHHHHhCC
Confidence            9998888788889999999999999999887643
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Back     information, alignment and structure
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure