Citrus Sinensis ID: 023412

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MDSLCCFNASYSKLVGGRSSSTGKGRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG
cccccccccccccccccccccccccccccccEEEEEEEEccccccccccEEEEEEcccccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEccccccccccHHHHHHHcccEEEEccccccccccHHHHHHHcccccccccccccccEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEEcc
cccccccccccccccccccccccccccccccEEEEEEEcccccccccHHHEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccEEEEEEcccccEEEEEccEEEEEcccccccHHHHHHHHcccEEEEccccccccccEHHHHHHHccHHHHHHccccccEEEEEEccccEEEEEEcccHHHHccHHHHHHHHHccccHHHHHHHHHHHHHcccccccEEEEEEEEcc
mdslccfnasysklvggrssstgkgrsnvglVKFGFSLvkgkanhpmedyHVAKFVQLQghelglfaiydghlgetvPAYLQKHLFSNilkeeefwvdpqrsiSKAYEKTDQAILshssdlgrggstAVTAILINGQRLWVANVGDSRAVLSTAGVAVQmttdhepntergsiedkggfvsnmpgdvprvngqlavsrafgdkslkshlrsdpdiqntildgrSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKrdskddiscvVVRFRG
MDSLCCFNASYSklvggrssstgkgrsnvglVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILshssdlgrggSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVqmttdhepntergsiedkGGFVSNMPGDVPRVNGQLAVSRAFGdkslkshlrsdpdiqntildgrsDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAealkrdskddiscvvvrfrg
MDSLCCFNASYSKLVggrssstgkgrsNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG
***LCCFNASYSKLV************NVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSI*******************RGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAV**********************************************************NTILDGRSDVLVLASDGLWKVMSNQEAVDI***************************SCVVV****
**SLCCF*************************KFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSS**GRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG
MDSLCCFNASYSKLVG********GRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG
*****C****Y*****************VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSLCCFNASYSKLVGGRSSSTGKGRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
Q9S9Z7282 Probable protein phosphat yes no 0.996 0.996 0.794 1e-131
Q9LME4281 Probable protein phosphat no no 0.992 0.996 0.751 1e-124
Q7XQU7284 Probable protein phosphat yes no 0.996 0.989 0.703 1e-116
Q8L7I4283 Probable protein phosphat no no 0.992 0.989 0.647 1e-106
Q0D673290 Probable protein phosphat yes no 0.918 0.893 0.643 7e-94
Q0JAA0321 Probable protein phosphat no no 0.960 0.844 0.586 2e-93
Q93YW5283 Probable protein phosphat no no 0.939 0.936 0.597 8e-91
Q9SIU8290 Probable protein phosphat no no 0.943 0.917 0.595 4e-89
Q9LDA7289 Probable protein phosphat no no 0.932 0.910 0.613 6e-89
O64583339 Probable protein phosphat no no 0.865 0.719 0.540 1e-68
>sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1 Back     alignment and function desciption
 Score =  467 bits (1202), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/282 (79%), Positives = 253/282 (89%), Gaps = 1/282 (0%)

Query: 1   MDSLCCFNAS-YSKLVGGRSSSTGKGRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ 59
           M  LCCF +S Y  +VG  S+S+GKGR+N G +KFG+SLVKGKANHPMEDYHV+KFV++ 
Sbjct: 1   MAKLCCFGSSDYDLVVGRASTSSGKGRNNDGEIKFGYSLVKGKANHPMEDYHVSKFVKID 60

Query: 60  GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSS 119
           G+ELGLFAIYDGHLGE VPAYLQKHLFSNILKEE+F  DPQRSI  AYEKTDQAILSHSS
Sbjct: 61  GNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSS 120

Query: 120 DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGF 179
           DLGRGGSTAVTAIL+NG+RLWVANVGDSRAVLS  G A+QMT DHEP+TER SIE KGGF
Sbjct: 121 DLGRGGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPHTERLSIEGKGGF 180

Query: 180 VSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMS 239
           VSNMPGDVPRVNGQLAVSRAFGDKSLK+HLRSDPD++++ +D  +DVLVLASDGLWKVM+
Sbjct: 181 VSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMA 240

Query: 240 NQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFR 281
           NQEA+DIAR+ KDP KAAK+LT EAL+RDSKDDISC+VVR R
Sbjct: 241 NQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVVRLR 282

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LME4|P2C09_ARATH Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1 Back     alignment and function description
>sp|Q7XQU7|P2C41_ORYSJ Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0452000 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7I4|P2C17_ARATH Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1 Back     alignment and function description
>sp|Q0D673|P2C62_ORYSJ Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1 Back     alignment and function description
>sp|Q0JAA0|P2C44_ORYSJ Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1 Back     alignment and function description
>sp|Q9SIU8|P2C20_ARATH Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3 Back     alignment and function description
>sp|Q9LDA7|P2C39_ARATH Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1 Back     alignment and function description
>sp|O64583|P2C28_ARATH Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
224084662283 predicted protein [Populus trichocarpa] 1.0 0.996 0.869 1e-141
225459296283 PREDICTED: probable protein phosphatase 1.0 0.996 0.840 1e-138
224063237283 predicted protein [Populus trichocarpa] 1.0 0.996 0.862 1e-136
356515790282 PREDICTED: probable protein phosphatase 0.996 0.996 0.815 1e-134
449437018281 PREDICTED: probable protein phosphatase 0.985 0.989 0.827 1e-134
356508095283 PREDICTED: probable protein phosphatase 0.996 0.992 0.812 1e-133
255545728283 protein phosphatase 2c, putative [Ricinu 0.996 0.992 0.840 1e-133
255545732280 protein phosphatase 2c, putative [Ricinu 0.989 0.996 0.826 1e-130
15218759282 putative protein phosphatase 2C 10 [Arab 0.996 0.996 0.794 1e-129
449438775283 PREDICTED: probable protein phosphatase 1.0 0.996 0.780 1e-129
>gi|224084662|ref|XP_002307378.1| predicted protein [Populus trichocarpa] gi|222856827|gb|EEE94374.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/283 (86%), Positives = 263/283 (92%), Gaps = 1/283 (0%)

Query: 1   MDSLCCFNASYSKLVGGRSSST-GKGRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ 59
           MD LCCF  SYS+LVGGRSSST GKG+++ GL+K+GFSLVKGKANHPMEDYHVAKFVQ+Q
Sbjct: 1   MDWLCCFFPSYSQLVGGRSSSTSGKGKNHEGLIKYGFSLVKGKANHPMEDYHVAKFVQIQ 60

Query: 60  GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSS 119
            HELGLFAIYDGHLG+TVPAYLQKHLFSNILKEEEFWVDP RSISKAYE+TDQAILS+SS
Sbjct: 61  EHELGLFAIYDGHLGDTVPAYLQKHLFSNILKEEEFWVDPNRSISKAYERTDQAILSNSS 120

Query: 120 DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGF 179
           DLGRGGSTAVTAILIN +RLWVANVGDSRAVLS  G A QMTTDHEPNTERGSIE+KGGF
Sbjct: 121 DLGRGGSTAVTAILINSKRLWVANVGDSRAVLSRGGQARQMTTDHEPNTERGSIENKGGF 180

Query: 180 VSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMS 239
           VSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQ   +D  ++VLVLASDGLWKVMS
Sbjct: 181 VSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQEIDIDNNTEVLVLASDGLWKVMS 240

Query: 240 NQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG 282
           NQEAVDIAR+ KDP KAAKQLT EALKR+SKDDISCVVVRFRG
Sbjct: 241 NQEAVDIARRIKDPMKAAKQLTTEALKRESKDDISCVVVRFRG 283

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225459296|ref|XP_002285790.1| PREDICTED: probable protein phosphatase 2C 10 [Vitis vinifera] gi|302141960|emb|CBI19163.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224063237|ref|XP_002301055.1| predicted protein [Populus trichocarpa] gi|222842781|gb|EEE80328.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356515790|ref|XP_003526581.1| PREDICTED: probable protein phosphatase 2C 10-like [Glycine max] Back     alignment and taxonomy information
>gi|449437018|ref|XP_004136289.1| PREDICTED: probable protein phosphatase 2C 10-like [Cucumis sativus] gi|449496976|ref|XP_004160279.1| PREDICTED: probable protein phosphatase 2C 10-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356508095|ref|XP_003522796.1| PREDICTED: probable protein phosphatase 2C 10-like [Glycine max] Back     alignment and taxonomy information
>gi|255545728|ref|XP_002513924.1| protein phosphatase 2c, putative [Ricinus communis] gi|223547010|gb|EEF48507.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255545732|ref|XP_002513926.1| protein phosphatase 2c, putative [Ricinus communis] gi|223547012|gb|EEF48509.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15218759|ref|NP_174731.1| putative protein phosphatase 2C 10 [Arabidopsis thaliana] gi|75199903|sp|Q9S9Z7.1|P2C10_ARATH RecName: Full=Probable protein phosphatase 2C 10; Short=AtPP2C10 gi|5668780|gb|AAD46006.1|AC007894_4 Strong similarity to gb|AF092432 protein phosphatase type 2C from Lotus japonicus. EST gb|T76026 comes from this gene [Arabidopsis thaliana] gi|13877699|gb|AAK43927.1|AF370608_1 protein phosphatase type 2C-like protein [Arabidopsis thaliana] gi|110736368|dbj|BAF00153.1| putative protein phosphatase type 2C [Arabidopsis thaliana] gi|190684764|gb|ACE82593.1| At1g34750 [Arabidopsis thaliana] gi|332193613|gb|AEE31734.1| putative protein phosphatase 2C 10 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449438775|ref|XP_004137163.1| PREDICTED: probable protein phosphatase 2C 10-like [Cucumis sativus] gi|449520573|ref|XP_004167308.1| PREDICTED: probable protein phosphatase 2C 10-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.996 0.996 0.769 7.3e-114
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.992 0.989 0.630 7e-93
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.882 0.879 0.622 4.5e-82
TAIR|locus:2046046290 PIA1 "PP2C induced by AVRRPM1" 0.882 0.858 0.610 6e-80
TAIR|locus:2087095289 AT3G15260 [Arabidopsis thalian 0.886 0.865 0.628 6.8e-79
TAIR|locus:2061579339 AT2G34740 [Arabidopsis thalian 0.865 0.719 0.540 2.3e-64
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.875 0.697 0.456 9.2e-52
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.875 0.552 0.456 1.5e-51
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.875 0.794 0.452 2.4e-51
TAIR|locus:2163781420 AT5G53140 [Arabidopsis thalian 0.879 0.590 0.419 2e-49
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
 Identities = 217/282 (76%), Positives = 243/282 (86%)

Query:     1 MDSLCCFNAS-YSKLVXXXXXXXXXXXXNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ 59
             M  LCCF +S Y  +V            N G +KFG+SLVKGKANHPMEDYHV+KFV++ 
Sbjct:     1 MAKLCCFGSSDYDLVVGRASTSSGKGRNNDGEIKFGYSLVKGKANHPMEDYHVSKFVKID 60

Query:    60 GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSS 119
             G+ELGLFAIYDGHLGE VPAYLQKHLFSNILKEE+F  DPQRSI  AYEKTDQAILSHSS
Sbjct:    61 GNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSS 120

Query:   120 DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGF 179
             DLGRGGSTAVTAIL+NG+RLWVANVGDSRAVLS  G A+QMT DHEP+TER SIE KGGF
Sbjct:   121 DLGRGGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPHTERLSIEGKGGF 180

Query:   180 VSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMS 239
             VSNMPGDVPRVNGQLAVSRAFGDKSLK+HLRSDPD++++ +D  +DVLVLASDGLWKVM+
Sbjct:   181 VSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMA 240

Query:   240 NQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFR 281
             NQEA+DIAR+ KDP KAAK+LT EAL+RDSKDDISC+VVR R
Sbjct:   241 NQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVVRLR 282
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0002237 "response to molecule of bacterial origin" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163781 AT5G53140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XQU7P2C41_ORYSJ3, ., 1, ., 3, ., 1, 60.70310.99640.9894yesno
Q0D673P2C62_ORYSJ3, ., 1, ., 3, ., 1, 60.64390.91840.8931yesno
Q9LME4P2C09_ARATH3, ., 1, ., 3, ., 1, 60.75170.99290.9964nono
Q9S9Z7P2C10_ARATH3, ., 1, ., 3, ., 1, 60.79430.99640.9964yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-85
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 8e-75
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 9e-60
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-46
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 3e-37
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-35
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 1e-06
smart00331193 smart00331, PP2C_SIG, Sigma factor PP2C-like phosp 3e-05
TIGR02865764 TIGR02865, spore_II_E, stage II sporulation protei 0.001
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  254 bits (652), Expect = 4e-85
 Identities = 114/262 (43%), Positives = 146/262 (55%), Gaps = 21/262 (8%)

Query: 32  VKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILK 91
              G S   G      ED  V K   L   + GLF ++DGH G     +  K L   +L+
Sbjct: 1   FSAGVSDKGGD-RKTNEDAVVIKP-NLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLE 58

Query: 92  EEEFWV-----DPQRSISKAYEKTDQAILSHS---SDLGRGGSTAVTAILINGQRLWVAN 143
           E E  +     D + ++ KA+ + D+ IL  +    D  R G+TAV A LI G +L+VAN
Sbjct: 59  ELEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVA-LIRGNKLYVAN 117

Query: 144 VGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFG 201
           VGDSRAVL   G AVQ+T DH+P    ER  IE  GG VSN      RV G LAV+RA G
Sbjct: 118 VGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN-----GRVPGVLAVTRALG 172

Query: 202 DKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFK---DPQKAAK 258
           D  LK  + ++PD+    L    D L+LASDGLW V+SNQEAVDI R      D Q+AA+
Sbjct: 173 DFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQ 232

Query: 259 QLTAEALKRDSKDDISCVVVRF 280
           +L   AL+R S D+I+ VVVR 
Sbjct: 233 ELVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|214624 smart00331, PP2C_SIG, Sigma factor PP2C-like phosphatases Back     alignment and domain information
>gnl|CDD|234038 TIGR02865, spore_II_E, stage II sporulation protein E Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.92
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.92
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.87
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.86
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.81
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.77
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.62
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.89
PRK10693303 response regulator of RpoS; Provisional 86.23
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.5e-46  Score=328.33  Aligned_cols=246  Identities=35%  Similarity=0.567  Sum_probs=205.7

Q ss_pred             ceeEEEEeecCCCCCCCCceeeeeeeec--------CCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhcccCCcchHHH
Q 023412           31 LVKFGFSLVKGKANHPMEDYHVAKFVQL--------QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRS  102 (282)
Q Consensus        31 ~~~~~~~s~~G~~~~~neD~~~~~~~~~--------~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~  102 (282)
                      .+.++.+|++|.|. .|||++++.....        ......+|+|||||||+.++.++++.+.+.+.+.......+.+.
T Consensus        64 ~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~a  142 (365)
T PLN03145         64 VVRSGAWADIGSRS-SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKV  142 (365)
T ss_pred             ceEEEEEccccCCC-CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHH
Confidence            35789999999866 8999987542210        12235799999999999999999999999888765555566788


Q ss_pred             HHHHHHHHHHHHHhccC-CCCCCCcceEEEEEEeCCEEEEEEcCCccEEEEeCCeeEeCCCCCCCC--chHHHHHhCCCe
Q 023412          103 ISKAYEKTDQAILSHSS-DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGF  179 (282)
Q Consensus       103 l~~~~~~~~~~l~~~~~-~~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~--~e~~ri~~~gg~  179 (282)
                      |.++|..++.++..... .....+|||++++++.++.++++|+||||+|+++++++++||+||++.  .|++||.+.||.
T Consensus       143 l~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~  222 (365)
T PLN03145        143 VSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGY  222 (365)
T ss_pred             HHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCc
Confidence            99999999999876432 223358999999999999999999999999999999999999999998  788899999998


Q ss_pred             eecCCCCCCcccCcccccccccCCCCCC-------CCCCCceEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHHH----H
Q 023412          180 VSNMPGDVPRVNGQLAVSRAFGDKSLKS-------HLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIA----R  248 (282)
Q Consensus       180 ~~~~~~~~~~~~~~~~ltralG~~~~~~-------~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~ei~~~~----~  248 (282)
                      +..     .+.++.+.+||+||+..+|.       .+.++|++..+.+.+.+.+||||||||||.++++++.+++    .
T Consensus       223 v~~-----g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~  297 (365)
T PLN03145        223 VYD-----GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ  297 (365)
T ss_pred             eec-----ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence            753     35677788999999976653       3678999999999975668889999999999999976554    4


Q ss_pred             ccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCC
Q 023412          249 KFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG  282 (282)
Q Consensus       249 ~~~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~g  282 (282)
                      ...+|+++|+.|++.|+++++.||+|+|||+|+.
T Consensus       298 ~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~  331 (365)
T PLN03145        298 EHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQS  331 (365)
T ss_pred             cCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeec
Confidence            4568999999999999999999999999999863

>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-27
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 5e-27
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-26
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-25
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-25
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-25
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 4e-25
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-23
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-23
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-23
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-23
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-23
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-23
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 5e-23
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 5e-23
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-20
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 4e-12
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 6e-11
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 8e-09
2pom_A372 Tab1 With Manganese Ion Length = 372 2e-07
2j4o_A401 Structure Of Tab1 Length = 401 3e-07
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-06
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 3e-06
1txo_A237 Crystal Structure Of The Mycobacterium Tuberculosis 2e-04
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 129/257 (50%), Gaps = 42/257 (16%)
Query: 65  LFAIYDGHLGETVPAYLQKH----LFSNILKEEEFWVDP-------QRSISKAYEKTDQA 113
            F +YDGH G  V  Y ++     L   I+KE+  + D        ++++  ++ + D  
Sbjct: 61  FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 114 ILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNT--ERG 171
           I + +      GST+V A++     ++VAN GDSRAVL      + ++ DH+P+   E  
Sbjct: 121 IETVAHAPETVGSTSVVAVVFPTH-IFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAA 179
Query: 172 SIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLAS 231
            IE  GG V    G   RV G LA+SR+ GD+ LK  +  DP++ +       D L+LAS
Sbjct: 180 RIEAAGGKVIRWNG--ARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILAS 237
Query: 232 DGLWKVMSNQEAVDIARKF------------------------KDP--QKAAKQLTAEAL 265
           DGLW VM+N+E  D+ARK                         KDP    AA+ L+  AL
Sbjct: 238 DGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMAL 297
Query: 266 KRDSKDDISCVVVRFRG 282
           ++ SKD+IS VVV  +G
Sbjct: 298 QKGSKDNISVVVVDLKG 314
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A. Length = 237 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-109
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-108
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 3e-95
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-95
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 4e-93
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 8e-90
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-85
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 6e-85
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 5e-71
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-70
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 3e-64
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-53
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-34
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-27
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-25
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 6e-25
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 4e-23
3rnr_A211 Stage II sporulation E family protein; structural 1e-20
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 2e-04
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
 Score =  316 bits (812), Expect = e-109
 Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 13/263 (4%)

Query: 29  VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSN 88
           + L   G +   GK     ED            E+  FA+YDGH G     +   H+   
Sbjct: 5   ISLENVGCASQIGKRKE-NEDRFD---FAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKC 60

Query: 89  ILKEEEFWVDPQRSISKAYEKTDQAILSHSS-----DLGRGGSTAVTAILINGQRLWVAN 143
           I+       + +  ++ A+ + D+A  SH+       L   G+TA  A+L +G  L VA+
Sbjct: 61  IMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVAS 120

Query: 144 VGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFG 201
           VGDSRA+L   G  +++T DH P    E+  I+  GGFV+      P VNG+LA++R+ G
Sbjct: 121 VGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIG 180

Query: 202 DKSLKSH-LRSDPDIQNTILDGRSDV-LVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQ 259
           D  LK+  + ++P+ +   L    D  LVL +DG+  ++++QE  D   +  DP +AA  
Sbjct: 181 DLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHA 240

Query: 260 LTAEALKRDSKDDISCVVVRFRG 282
           +T +A++  ++D+ + VVV F  
Sbjct: 241 VTEQAIQYGTEDNSTAVVVPFGA 263
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Length = 242 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.91
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.9
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.82
3f79_A255 Probable two-component response regulator; adaptor 99.79
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.38
3eq2_A394 Probable two-component response regulator; adaptor 98.9
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=9.2e-47  Score=330.45  Aligned_cols=249  Identities=31%  Similarity=0.509  Sum_probs=210.5

Q ss_pred             CCCCceeEEEEeecCCCCCCCCceeeeeeeecC-CCceEEEEEEcCCCCChHHHHHHHHHHHHHHhcccCC---------
Q 023412           27 SNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFW---------   96 (282)
Q Consensus        27 ~~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~---------   96 (282)
                      +.+..+.+++.+.+|+|. .|||++++...... .....+|+|||||||+.+|+++++.+++.+.+...+.         
T Consensus        19 ~~~~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~   97 (307)
T 2p8e_A           19 GAGNGLRYGLSSMQGWRV-EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSAL   97 (307)
T ss_dssp             EEETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC---------
T ss_pred             CCCCCeeEEEEecCCCCC-cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccc
Confidence            334679999999999976 89999986543221 1356899999999999999999999999887532222         


Q ss_pred             ----cchHHHHHHHHHHHHHHHHhccCC--CCCCCcceEEEEEEeCCEEEEEEcCCccEEEEeCCeeEeCCCCCCCC--c
Q 023412           97 ----VDPQRSISKAYEKTDQAILSHSSD--LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--T  168 (282)
Q Consensus        97 ----~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~--~  168 (282)
                          ..+...|.++|..+++.+......  ....+|||++++++.+++++++|+||||+|++|++++.+||+||++.  .
T Consensus        98 ~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~  177 (307)
T 2p8e_A           98 ELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPR  177 (307)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHH
Confidence                234678999999999999876432  23568999999999999999999999999999999999999999998  7


Q ss_pred             hHHHHHhCCCeeecCCCCCCcccCcccccccccCCCCCC---------CCCCCceEEEEEecCCCeEEEEEcCCCCCCCC
Q 023412          169 ERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKS---------HLRSDPDIQNTILDGRSDVLVLASDGLWKVMS  239 (282)
Q Consensus       169 e~~ri~~~gg~~~~~~~~~~~~~~~~~ltralG~~~~~~---------~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~  239 (282)
                      |.+||...||.+..     .|.++.+.+||+||+..+|.         .+.++|++..+.+.+.+++||||||||||.++
T Consensus       178 E~~rI~~~gg~v~~-----~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls  252 (307)
T 2p8e_A          178 EKERIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMS  252 (307)
T ss_dssp             HHHHHHHTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSC
T ss_pred             HHHHHHHcCCEEEe-----CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCC
Confidence            88899999988763     47788889999999987763         46789999999999733489999999999999


Q ss_pred             HHHHHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeC
Q 023412          240 NQEAVDIARK----FKDPQKAAKQLTAEALKRDSKDDISCVVVRFR  281 (282)
Q Consensus       240 ~~ei~~~~~~----~~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~  281 (282)
                      ++++.++++.    ..+++++|+.|++.|+++++.||+|+|||++.
T Consensus       253 ~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~  298 (307)
T 2p8e_A          253 NEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS  298 (307)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence            9999999976    57999999999999999999999999999985
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 6e-49
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-29
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (409), Expect = 6e-49
 Identities = 82/279 (29%), Positives = 118/279 (42%), Gaps = 35/279 (12%)

Query: 32  VKFGFSLVKGKANHPMEDYHVAKFVQLQGHE-LGLFAIYDGHLGETVPAYLQKHLFSNIL 90
           +++G S ++G     MED H A      G E    FA+YDGH G  V  Y  +HL  +I 
Sbjct: 21  LRYGLSSMQGWRVE-MEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHIT 79

Query: 91  KEEEFW----VDPQRSISKAYEKTDQAILSH-------SSDLGRGGSTAVTAILINGQRL 139
             ++F          ++          I  H            R GSTAV  +LI+ Q  
Sbjct: 80  NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAV-GVLISPQHT 138

Query: 140 WVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVS 197
           +  N GDSR +L         T DH+P+   E+  I++ GG V        RVNG LAVS
Sbjct: 139 YFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI-----QRVNGSLAVS 193

Query: 198 RAFGDKSLKSHLRSDPDIQN----------TILDGRSDVLVLASDGLWKVMSNQEAVDIA 247
           RA GD   K      P  Q              +     ++LA DG+W VM N+E  D  
Sbjct: 194 RALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 253

Query: 248 RKF----KDPQKAAKQLTAEALKRDSKDDISCVVVRFRG 282
           R       D +K   ++    L + S+D++S +++ F  
Sbjct: 254 RSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-49  Score=339.05  Aligned_cols=256  Identities=29%  Similarity=0.514  Sum_probs=216.4

Q ss_pred             CCCCCCCCCCceeEEEEeecCCCCCCCCceeeeeeeecCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHhcccC----
Q 023412           21 STGKGRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQG-HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF----   95 (282)
Q Consensus        21 ~~~~~~~~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~-~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~----   95 (282)
                      ++....+.+..++||+++.+|+|. .|||++.+.....++ .++.+|||||||||+.+|+++++.+.+.+.+....    
T Consensus        10 ~k~~~~~~~~~~~~g~~s~~G~R~-~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~   88 (295)
T d1a6qa2          10 EKHNAQGQGNGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSA   88 (295)
T ss_dssp             EEEEEEEEETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSS
T ss_pred             ccCcccccCCceEEEEEeCccCCC-cccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhcccc
Confidence            333344566789999999999988 899999876554333 45789999999999999999999999988754221    


Q ss_pred             ----CcchHHHHHHHHHHHHHHHHhcc--CCCCCCCcceEEEEEEeCCEEEEEEcCCccEEEEeCCeeEeCCCCCCCC--
Q 023412           96 ----WVDPQRSISKAYEKTDQAILSHS--SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--  167 (282)
Q Consensus        96 ----~~~~~~~l~~~~~~~~~~l~~~~--~~~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~--  167 (282)
                          ...+.+.|+++|.++++.+....  ......+|||++++++.+++++++|+||||+|+++++++.+||.||++.  
T Consensus        89 ~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~  168 (295)
T d1a6qa2          89 GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP  168 (295)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccH
Confidence                12356778899999988876533  2334568999999999999999999999999999999999999999999  


Q ss_pred             chHHHHHhCCCeeecCCCCCCcccCcccccccccCCCCCC---------CCCCCceEEEEEec-CCCeEEEEEcCCCCCC
Q 023412          168 TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKS---------HLRSDPDIQNTILD-GRSDVLVLASDGLWKV  237 (282)
Q Consensus       168 ~e~~ri~~~gg~~~~~~~~~~~~~~~~~ltralG~~~~~~---------~v~~~p~~~~~~l~-~~~d~lll~SDGv~~~  237 (282)
                      .|++|+...||.+.     .++.++.+.+||+||+..+|.         .+.++|++..+.+. +++++||||||||||.
T Consensus       169 ~E~~Ri~~~gg~v~-----~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~  243 (295)
T d1a6qa2         169 LEKERIQNAGGSVM-----IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDV  243 (295)
T ss_dssp             HHHHHHHHTTCCEE-----TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTT
T ss_pred             HHHhhHhhcCCccc-----ccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCccccc
Confidence            89999999999886     358889999999999988773         48899999999986 3356999999999999


Q ss_pred             CCHHHHHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCC
Q 023412          238 MSNQEAVDIARK----FKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG  282 (282)
Q Consensus       238 l~~~ei~~~~~~----~~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~g  282 (282)
                      ++.+|+.++++.    ..+++.+|+.|++.|+++++.||+|||||+|++
T Consensus       244 l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~  292 (295)
T d1a6qa2         244 MGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPN  292 (295)
T ss_dssp             SCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTT
T ss_pred             CCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccC
Confidence            999999998864    478999999999999999999999999999975
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure