Citrus Sinensis ID: 023415

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Secondary Structure (PSIPRED)
cHHHHcccccccccccccccEEEcccccHHHHHHHHHHHHcccccccccccccEEEEccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccEEEcccccccccccccEEEcccccccccccccccccccccEEEccHHHHHHHHHccccccEEEEccccHHHHHHHHHcccccccEEccccHHHccccccccccccccccccccccHHHcccccccEEEcccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHccccEEEEcccccccEEcccccHHHHHHHHHHHHHEHccccEEccccEEEEEHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccEEEccccccccEEEEEEEEEccccccHHHHHHHcccEEEEEEcccHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHcccEEEEEccccccccccccccccccccccHHHHHHHHHHHccEEEEEEEccccccccccccccHHHHHHHHHHHcccHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MAAAAKHLTPVLLElggkspvvfdsGINLKVACRRMImgkwgcnngqacispdhiittkdYAPKLLESLKNELEnfygknpleskdlsrivnSNHFARLSKlldddkvsgkivhggerdknklriaptllldvprdslimseeifgpllpiltvdkiedsfdiinsgtkPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVhslpfggvqesgmgayhgkfsfdvfshkkavlsrgfigdvpvryppytkgKLRLLKVLISGSLLGIIRALLGWSKA
Flexible Loop (DISEMBL)
MAAAAKHLTPVLlelggkspvvfDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKnpleskdlsrIVNSNHFARlsklldddkvsgkivhggerdknklriaptLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLsrgfigdvpvryppytKGKLRLLKVLISGSLLGIIRallgwska
Low Complexity Region (SEG)
MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPklleslknelenFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Disordered region (IsUnstruct)
*******LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN******LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW***
Disordered Region (DISOPRED)
MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Disordered Region (DISEMBL)
MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Disordered Region (DISPRO)
*****KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK*
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
Q70DU8	484	Aldehyde dehydrogenase fa	yes	no	0.985	0.574	0.730	1e-122
Q8VXQ2	479	Aldehyde dehydrogenase OS	N/A	no	0.992	0.584	0.617	1e-102
Q8W033	550	Aldehyde dehydrogenase fa	no	no	0.975	0.5	0.629	1e-101
Q70E96	484	Aldehyde dehydrogenase fa	no	no	0.985	0.574	0.487	1e-75
P11883	453	Aldehyde dehydrogenase, d	yes	no	0.875	0.545	0.476	8e-67
P30839	484	Fatty aldehyde dehydrogen	no	no	0.921	0.537	0.468	1e-66
P47740	484	Fatty aldehyde dehydrogen	yes	no	0.921	0.537	0.464	2e-65
P30838	453	Aldehyde dehydrogenase, d	yes	no	0.875	0.545	0.472	7e-65
P47739	453	Aldehyde dehydrogenase, d	no	no	0.875	0.545	0.476	1e-64
A3RF36	453	Aldehyde dehydrogenase, d	no	no	0.875	0.545	0.464	5e-64

>sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2

 Score =  436 bits (1122), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 203/278 (73%), Positives = 243/278 (87%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I+GKWGCNNGQAC+SPD+I+TTK+
Sbjct: 205 MAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWGCNNGQACVSPDYILTTKE 264

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPKL++++K ELE FYGKNP+ESKD+SRIVNSNHF RLSKLLD+ +VS KIV+GGE+D+
Sbjct: 265 YAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKLLDEKEVSDKIVYGGEKDR 324

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
             L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+SFD+I S  KPLAAYLFT+NK
Sbjct: 325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNK 384

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMGAYHGKFSFD FSHKKAVL R
Sbjct: 385 KLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 278
              GD  VRYPPY++GKLRLLK L+  ++  + + LLG
Sbjct: 445 SLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/280 (61%), Positives = 221/280 (78%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +++AAKHLTPV+LELGGK P V D+ I+LKVA RR+I  KW  N+GQ CISPD+IITT++
Sbjct: 199 LSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISWKWSGNSGQTCISPDYIITTEE 258

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
            APKL++++K ELE+FYGK+PL+S+D+S I+N   F R++ LLDD KVS KIV+GG+ DK
Sbjct: 259 NAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERMTGLLDDKKVSDKIVYGGQSDK 318

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           + L+IAPT+LLDV  DS +MSEEIFGPLLPI+TV KIE+ + II S  KPLAAYLFTN+K
Sbjct: 319 SNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEECYKIIASKPKPLAAYLFTNDK 378

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K  ++FV  VSAGG+ IND A+H     LPFGGV ESGMG+YHGKFSFD FSHKK+VL R
Sbjct: 379 KRTEEFVSNVSAGGITINDIALHFLEPRLPFGGVGESGMGSYHGKFSFDAFSHKKSVLKR 438

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F G+V  RYPPY   KL  ++ ++ G + G+++A LGWS
Sbjct: 439 SFGGEVAARYPPYAPWKLHFMEAILQGDIFGLLKAWLGWS 478

Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde.

Craterostigma plantagineum (taxid: 4153)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2

 Score =  369 bits (948), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/275 (62%), Positives = 216/275 (78%)

Query: 7   HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLL 66
           +LTPV+LELGGK P + DS +NL+VA RR+I GKW CN+GQACI  D++ITTKD+A KL+
Sbjct: 274 NLTPVVLELGGKCPALVDSDVNLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLI 333

Query: 67  ESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA 126
           ++LK ELE F+G+N LESKDLSRIVNS HF RL  +L ++ V+ KIVHGG   ++KL+I+
Sbjct: 334 DALKTELETFFGQNALESKDLSRIVNSFHFKRLESMLKENGVANKIVHGGRITEDKLKIS 393

Query: 127 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 186
           PT+LLDVP  S +M EEIFGPLLPI+TV KIED F +I S  KPLAAYLFTNNK+L++QF
Sbjct: 394 PTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKPKPLAAYLFTNNKELEKQF 453

Query: 187 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 246
           V+ VSAGG+ INDT +H+ V  LPFGGV ESG+GAYHGKFS++ FSHKK VL R F GD 
Sbjct: 454 VQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDA 513

Query: 247 PVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK 281
            +RYPPYT  K  +LK L+S ++   I A  G+SK
Sbjct: 514 DLRYPPYTPKKKMVLKALLSSNIFAAILAFFGFSK 548

Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2

 Score =  283 bits (723), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 137/281 (48%), Positives = 188/281 (66%), Gaps = 3/281 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIIT 57
           MAAAA+HLTPV LELGGK P + D      N+K   +R+  GKWG  NGQACIS D+++ 
Sbjct: 201 MAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQACISVDYVLI 260

Query: 58  TKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE 117
            K +AP L++ LK  +++F+G+NP ES  LSRI N +H  RLS+LL D +V   IV+GG 
Sbjct: 261 EKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRVQASIVYGGS 320

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV  I++S  IIN+  KPLA Y FT
Sbjct: 321 IDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKPKPLAIYAFT 380

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           N++ LK + +   S+G +  ND  +     +LPFGGV ESG+G YHGK+SFD FSH+KA+
Sbjct: 381 NDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAI 440

Query: 238 LSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 278
           +      D+  RYPP+   KL  +++    +   +I  +LG
Sbjct: 441 MEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3

 Score =  253 bits (647), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 121/254 (47%), Positives = 172/254 (67%), Gaps = 7/254 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 197 MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 255

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +++E LK  L++FYG++  +S+D  RI+N  HF R+  L+D+ KV+    HGG  D+
Sbjct: 256 IQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA----HGGTWDQ 311

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPLA Y+F+NN+
Sbjct: 312 SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNE 371

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ FSH+++ L +
Sbjct: 372 KVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 431

Query: 241 GFIGDVP--VRYPP 252
             + +     RYPP
Sbjct: 432 SLLNEEAHKARYPP 445

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|P30839|AL3A2_RAT Fatty aldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh3a2 PE=1 SV=1

 Score =  253 bits (646), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/267 (46%), Positives = 176/267 (65%), Gaps = 7/267 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+    
Sbjct: 194 MEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIAPDYILCEAS 252

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              ++++ +K+ +++FYG+N   S D  RI+N  HF R+  LL+      KI  GGE D+
Sbjct: 253 SQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLE----GQKIAFGGETDE 308

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPLA Y+F++N 
Sbjct: 309 ATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNN 368

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct: 369 KLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLK 428

Query: 241 GFIGDV--PVRYPPYTKGKLRLLKVLI 265
           G  G+    +RYPP ++ K+   K  +
Sbjct: 429 GLKGESVNKLRYPPNSESKVSWSKFFL 455

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P47740|AL3A2_MOUSE Fatty aldehyde dehydrogenase OS=Mus musculus GN=Aldh3a2 PE=2 SV=2

 Score =  249 bits (636), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/267 (46%), Positives = 173/267 (64%), Gaps = 7/267 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+    
Sbjct: 194 MEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRIAWGKY-MNCGQTCIAPDYILCEAS 252

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              ++++ +K  +++FYG+N   S D  RI+N  HF RL  LL   K    I  GGE D+
Sbjct: 253 LQNQIVQKIKETVKDFYGENIKASPDYERIINLRHFKRLQSLLKGQK----IAFGGEMDE 308

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               +APT+L DV  +S +M EEIFGP+LPI++V  ++++ + IN   KPLA Y+F+ N 
Sbjct: 309 ATRYLAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVDEAINFINDREKPLALYVFSRNN 368

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct: 369 KLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLK 428

Query: 241 GFIGDV--PVRYPPYTKGKLRLLKVLI 265
           G  G+    +RYPP ++ K+   K  +
Sbjct: 429 GLKGESVNKLRYPPNSESKVSWAKFFL 455

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P30838|AL3A1_HUMAN Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=3

 Score =  247 bits (630), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 120/254 (47%), Positives = 169/254 (66%), Gaps = 7/254 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 197 MTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 255

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +++E LK  L+ FYG++  +S+D  RI+++ HF R+  L++  KV+    +GG  D 
Sbjct: 256 IQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA----YGGTGDA 311

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               IAPT+L DV   S +M EEIFGP+LPI+ V  +E++   IN   KPLA Y+F++N 
Sbjct: 312 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSND 371

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ +HSLPFGGV  SGMG+YHGK SF+ FSH+++ L R
Sbjct: 372 KVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 431

Query: 241 GFIGD--VPVRYPP 252
             + D  + VRYPP
Sbjct: 432 PLMNDEGLKVRYPP 445

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|P47739|AL3A1_MOUSE Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=2

 Score =  246 bits (629), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 121/254 (47%), Positives = 167/254 (65%), Gaps = 7/254 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 197 MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 255

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +++E LK  L++FYG++  +S D  RI+N  HF R+  L+D    S K+ HGG  D+
Sbjct: 256 IQNEIVEKLKKSLKDFYGEDAKQSHDYGRIINDRHFQRVINLID----SKKVAHGGTWDQ 311

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               IAPT+L+DV   S +M EEIFGP++PI+ V  ++++   IN   KPLA Y+F+NN 
Sbjct: 312 PSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLDEAIKFINQREKPLALYVFSNND 371

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ FSH+++ L R
Sbjct: 372 KVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVR 431

Query: 241 GFIGDVP--VRYPP 252
               +     RYPP
Sbjct: 432 SLRNEEANKARYPP 445

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes and in preventing corneal damage caused by ultraviolet light.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|A3RF36|AL3A1_CANFA Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1

 Score =  244 bits (623), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 118/254 (46%), Positives = 168/254 (66%), Gaps = 7/254 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGK+P   D   +L +ACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 197 MMAAAKHLTPVTLELGGKNPCYVDKDCDLDIACRRIAWGKF-MNSGQTCVAPDYILCDPS 255

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +++E LK  L+ FYG++  +S+D  RI+NS HF R+  L++  KV+    +GG  D 
Sbjct: 256 IQNQIVEKLKKALKEFYGEDAKKSRDYGRIINSRHFQRVMGLMEGQKVA----YGGTGDA 311

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPLA Y+F+ N 
Sbjct: 312 ATRYIAPTILIDVDTQSQVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSLND 371

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH++VHSLP+GGV  SGMG+YHGK SF+ FSH ++ L R
Sbjct: 372 KMIKKMIAETSSGGVTANDVIVHVSVHSLPYGGVGNSGMGSYHGKKSFETFSHCRSCLVR 431

Query: 241 GFIGD--VPVRYPP 252
             + D  +  RYPP
Sbjct: 432 PLLNDESLKTRYPP 445

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.

Canis familiaris (taxid: 9615)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
449449751	484	PREDICTED: aldehyde dehydrogenase family	0.992	0.578	0.796	1e-134
449500678	484	PREDICTED: aldehyde dehydrogenase family	0.992	0.578	0.792	1e-133
449449753	462	PREDICTED: LOW QUALITY PROTEIN: aldehyde	0.992	0.606	0.792	1e-133
217074984	488	unknown [Medicago truncatula]	0.992	0.573	0.8	1e-132
356503028	496	PREDICTED: aldehyde dehydrogenase family	0.989	0.562	0.802	1e-130
388516635	280	unknown [Medicago truncatula]	0.992	1.0	0.8	1e-130
356552697	487	PREDICTED: aldehyde dehydrogenase family	0.989	0.572	0.813	1e-129
356552695	496	PREDICTED: aldehyde dehydrogenase family	0.989	0.562	0.813	1e-129
442736187	492	fatty aldehyde dehydrogenase [Simmondsia	0.989	0.567	0.777	1e-129
224082306	488	predicted protein [Populus trichocarpa]	0.992	0.573	0.789	1e-129

>gi|449449751|ref|XP_004142628.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus] gi|449500684|ref|XP_004161167.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/280 (79%), Positives = 257/280 (91%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSPVV DS INL+VA RR+I GKWGCNNGQACI+PD++ITTK+
Sbjct: 205 MAAAAKHLTPVVLELGGKSPVVVDSKINLQVASRRIIAGKWGCNNGQACIAPDYVITTKE 264

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           +APKL+E +K ELE FYGKNPLE+KDLSRIVN+NHF RL++LLDDDK+SGKIVHGGE+DK
Sbjct: 265 FAPKLVECMKQELEKFYGKNPLETKDLSRIVNANHFDRLTRLLDDDKISGKIVHGGEKDK 324

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KL+IAPTLLLDVPRDSLIM+EEIFGPLLPILTVDK+EDSFDI+NSGTKPLAAYLFTNNK
Sbjct: 325 SKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFDIVNSGTKPLAAYLFTNNK 384

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK++FV  +SAGG+ IN+TA+HL + +LPFGGV ESGMGAYHGKFSFD FSHKKAVL R
Sbjct: 385 KLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F GD P+RYPPYTKGKLR+LK L+ G +L +IRALLGWS
Sbjct: 445 SFAGDAPMRYPPYTKGKLRILKALLGGGILALIRALLGWS 484

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500678|ref|XP_004161166.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/280 (79%), Positives = 257/280 (91%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGK+PVV DS INL+VACRR+I GKWG NNGQAC++PD+IITTK+
Sbjct: 205 MAAAAKHLTPVILELGGKTPVVVDSKINLQVACRRIISGKWGGNNGQACVAPDYIITTKE 264

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           +APKL+ESLK ELE FYG NPLESKD+SRIVN+NHF R+SKLLDDD+VS KIVHGGE+DK
Sbjct: 265 FAPKLVESLKQELERFYGTNPLESKDISRIVNANHFNRVSKLLDDDEVSSKIVHGGEKDK 324

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KL+IAPT+LLDVPRDSLIM+EEIFGPLLPI+TVDK+EDSF+I+NSGTKPLAAYLF+NNK
Sbjct: 325 SKLQIAPTILLDVPRDSLIMTEEIFGPLLPIITVDKLEDSFEIVNSGTKPLAAYLFSNNK 384

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV  +SAGG+VINDT +HLAV +LPFGGV ESGMGAYHGKFSFD FSHKKAVL R
Sbjct: 385 KLKEQFVACISAGGVVINDTTIHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F+GDVP+RYPPYT GKLR LK L+ G +L +IRA+LGWS
Sbjct: 445 SFVGDVPMRYPPYTDGKLRFLKALLGGGILELIRAILGWS 484

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449753|ref|XP_004142629.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus]

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/280 (79%), Positives = 257/280 (91%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGK+PVV DS INL+VACRR+I GKWG NNGQAC++PD+IITTK+
Sbjct: 183 MAAAAKHLTPVILELGGKTPVVVDSKINLQVACRRIISGKWGGNNGQACVAPDYIITTKE 242

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           +APKL+ESLK ELE FYG NPLESKD+SRIVN+NHF R+SKLLDDD+VS KIVHGGE+DK
Sbjct: 243 FAPKLVESLKQELERFYGTNPLESKDISRIVNANHFNRVSKLLDDDEVSSKIVHGGEKDK 302

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KL+IAPT+LLDVPRDSLIM+EEIFGPLLPI+TVDK+EDSF+I+NSGTKPLAAYLF+NNK
Sbjct: 303 SKLQIAPTILLDVPRDSLIMTEEIFGPLLPIITVDKLEDSFEIVNSGTKPLAAYLFSNNK 362

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV  +SAGG+VINDT +HLAV +LPFGGV ESGMGAYHGKFSFD FSHKKAVL R
Sbjct: 363 KLKEQFVACISAGGVVINDTTIHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 422

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F+GDVP+RYPPYT GKLR LK L+ G +L +IRA+LGWS
Sbjct: 423 SFVGDVPMRYPPYTDGKLRFLKALLGGGILELIRAILGWS 462

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074984|gb|ACJ85852.1| unknown [Medicago truncatula]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/280 (80%), Positives = 251/280 (89%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSPVV DS INL+VA RR+I GKWGCNNGQACISPD+IITTKD
Sbjct: 209 MAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARRIIAGKWGCNNGQACISPDYIITTKD 268

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF RL +LLDDDKVSGKIVHGGE+DK
Sbjct: 269 YAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNHFDRLIRLLDDDKVSGKIVHGGEKDK 328

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KLRI+PT+LLDVPRDSLIMSEEIFGPLLPI+TVDK+++SFD+INS  KPLAAY+FTNN 
Sbjct: 329 SKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVDKLDESFDVINSAPKPLAAYIFTNNN 388

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV+TVSAGGLVI+DT +HLAVH+LPFGGV ESG+GAYHGKFSFD FSHKKAVL R
Sbjct: 389 KLKEQFVKTVSAGGLVIDDTTIHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYR 448

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F GD  +RYPPYT  K RL+K L+ G  L IIRAL G S
Sbjct: 449 SFFGDASIRYPPYTSTKTRLMKALMGGGFLAIIRALFGRS 488

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503028|ref|XP_003520314.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Glycine max]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/279 (80%), Positives = 256/279 (91%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I GKWG NNGQACISPD+IITTKD
Sbjct: 218 MAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGSNNGQACISPDYIITTKD 277

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPKL+++LK ELE FYGKNPLESKDLSR+VNSNHF RL+KLLDDDKVSGKIV+GG++D+
Sbjct: 278 YAPKLVDALKTELEKFYGKNPLESKDLSRVVNSNHFNRLTKLLDDDKVSGKIVYGGQKDE 337

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           NKL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDK+E+SFD+INSG KPLAAY+FTNNK
Sbjct: 338 NKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKLEESFDVINSGPKPLAAYIFTNNK 397

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ESG+GAYHGKFSF+ FSHKKAVL R
Sbjct: 398 KLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFEAFSHKKAVLYR 457

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW 279
            FIGD PVRYPPYT  K+RLLK +I G + GI+RAL GW
Sbjct: 458 KFIGDAPVRYPPYTNTKMRLLKAIIGGGIHGIVRALFGW 496

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516635|gb|AFK46379.1| unknown [Medicago truncatula]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/280 (80%), Positives = 251/280 (89%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSPVV DS INL+VA RR+I GKWGCNNGQACISPD+IITTKD
Sbjct: 1   MAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARRIIAGKWGCNNGQACISPDYIITTKD 60

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF RL +LLDDDKVSGKIVHGGE+DK
Sbjct: 61  YAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNHFDRLIRLLDDDKVSGKIVHGGEKDK 120

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KLRI+PT+LLDVPRDSLIMSEEIFGPLLPI+TVDK+++SFD+INS  KPLAAY+FTNN 
Sbjct: 121 SKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVDKLDESFDVINSAPKPLAAYIFTNNN 180

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV+TVSAGGLVI+DT +HLAVH+LPFGGV ESG+GAYHGKFSFD FSHKKAVL R
Sbjct: 181 KLKEQFVKTVSAGGLVIDDTTIHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYR 240

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F GD  +RYPPYT  K RL+K L+ G  L IIRAL G S
Sbjct: 241 SFFGDAFIRYPPYTSTKTRLMKALMGGGFLAIIRALFGRS 280

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552697|ref|XP_003544699.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 2 [Glycine max]

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/279 (81%), Positives = 257/279 (92%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I GKWG NNGQACISPD+IITTKD
Sbjct: 209 MAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGSNNGQACISPDYIITTKD 268

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF RL+KLLDDDKVSGKIV+GGE+D+
Sbjct: 269 YAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLTKLLDDDKVSGKIVYGGEKDE 328

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDKIE+SFD+INSG+KPLAAY+FTN K
Sbjct: 329 SKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKIEESFDVINSGSKPLAAYIFTNTK 388

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ESG+GAYHGKF+F+ FSHKKAVL R
Sbjct: 389 KLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFTFEAFSHKKAVLYR 448

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW 279
            FIGD PVRYPPYT  K+RLLK LI G +LGIIRAL GW
Sbjct: 449 RFIGDAPVRYPPYTNTKMRLLKALIGGGILGIIRALFGW 487

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552695|ref|XP_003544698.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max]

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/279 (81%), Positives = 257/279 (92%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I GKWG NNGQACISPD+IITTKD
Sbjct: 218 MAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGSNNGQACISPDYIITTKD 277

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF RL+KLLDDDKVSGKIV+GGE+D+
Sbjct: 278 YAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLTKLLDDDKVSGKIVYGGEKDE 337

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDKIE+SFD+INSG+KPLAAY+FTN K
Sbjct: 338 SKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKIEESFDVINSGSKPLAAYIFTNTK 397

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ESG+GAYHGKF+F+ FSHKKAVL R
Sbjct: 398 KLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFTFEAFSHKKAVLYR 457

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW 279
            FIGD PVRYPPYT  K+RLLK LI G +LGIIRAL GW
Sbjct: 458 RFIGDAPVRYPPYTNTKMRLLKALIGGGILGIIRALFGW 496

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|442736187|gb|AGC65583.1| fatty aldehyde dehydrogenase [Simmondsia chinensis]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/279 (77%), Positives = 251/279 (89%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSP + DS IN  VA RR+I GKWGCNNGQACISPD+IITTKD
Sbjct: 204 MAAAAKHLTPVVLELGGKSPAIVDSNINTTVAARRIIAGKWGCNNGQACISPDYIITTKD 263

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           +APKL+++LK ELE  YG  PLESKDLSRIVNSNHF RL++LLD+DKVSG+IV GG+RD+
Sbjct: 264 FAPKLIDTLKRELERCYGTEPLESKDLSRIVNSNHFDRLTRLLDEDKVSGRIVCGGQRDR 323

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +KLRIAPT+L  VP+DSLIMSEEIFGPLLP++TVD++E+SFD+INS TKPLAAYLFTN K
Sbjct: 324 DKLRIAPTVLQGVPQDSLIMSEEIFGPLLPVITVDRLEESFDLINSRTKPLAAYLFTNRK 383

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK +FV  VSAGGLVIND+A+HLAVH+LPFGGV ESGMG+YHGKFSFDVFSHKKAVL R
Sbjct: 384 KLKHEFVSNVSAGGLVINDSALHLAVHTLPFGGVAESGMGSYHGKFSFDVFSHKKAVLYR 443

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW 279
            F+GD   RYPPYT+GKLRLLK L+SGS+LGII+AL+GW
Sbjct: 444 SFMGDAAARYPPYTQGKLRLLKALLSGSILGIIKALMGW 482

Source: Simmondsia chinensis

Species: Simmondsia chinensis

Genus: Simmondsia

Family: Simmondsiaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082306|ref|XP_002306641.1| predicted protein [Populus trichocarpa] gi|222856090|gb|EEE93637.1| predicted protein [Populus trichocarpa]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/280 (78%), Positives = 254/280 (90%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSPVV DSGI++++A RR+I+GKWGCNNGQACISPD+IITTKD
Sbjct: 209 MAAAAKHLTPVVLELGGKSPVVVDSGIDIQIATRRIIVGKWGCNNGQACISPDYIITTKD 268

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
            A KL++SLK ELE FYGKNPLESKDLSRIVNSNHF+RL+KLLD+DKVSGKIV+GGERD+
Sbjct: 269 CAEKLVDSLKKELEAFYGKNPLESKDLSRIVNSNHFSRLTKLLDEDKVSGKIVYGGERDE 328

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
             LRIAPT+LL VP++SLIM EEIFGPLLPILTV KIEDSFDII SGTKPLAAYLFTNNK
Sbjct: 329 ANLRIAPTILLGVPQNSLIMKEEIFGPLLPILTVSKIEDSFDIIKSGTKPLAAYLFTNNK 388

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK+QF+ +VSAGG+VINDT +HLAVHS+PFGGV ESGMG+YHGKFSFD F+HKKAV+ R
Sbjct: 389 KLKEQFLMSVSAGGVVINDTTLHLAVHSVPFGGVGESGMGSYHGKFSFDAFTHKKAVVYR 448

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
            F+GD  VRYPPYT GKLRL+K LI+G++  I+R LLG S
Sbjct: 449 SFVGDASVRYPPYTLGKLRLMKALITGNVWTILRTLLGMS 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2205851	484	ALDH3H1 "AT1G44170" [Arabidops	0.985	0.574	0.708	2.5e-106
TAIR|locus:2116134	550	ALDH3I1 "AT4G34240" [Arabidops	0.996	0.510	0.608	5.1e-90
TAIR|locus:2122224	484	ALDH3F1 "AT4G36250" [Arabidops	0.982	0.572	0.482	4e-67
WB|WBGene00000110	494	alh-4 [Caenorhabditis elegans	0.918	0.524	0.468	2.4e-60
UNIPROTKB|E2RPP8	599	ALDH3A2 "Uncharacterized prote	0.921	0.434	0.456	9.9e-60
UNIPROTKB|D4A137	507	Aldh3a2 "Aldehyde dehydrogenas	0.921	0.512	0.460	5.7e-59
RGD|61866	484	Aldh3a2 "aldehyde dehydrogenas	0.921	0.537	0.460	7.3e-59
UNIPROTKB|P30839	484	Aldh3a2 "Fatty aldehyde dehydr	0.921	0.537	0.460	7.3e-59
UNIPROTKB|F1NH33	490	ALDH3A2 "Aldehyde dehydrogenas	0.968	0.557	0.456	1.5e-58
MGI|MGI:1353452	484	Aldh3a2 "aldehyde dehydrogenas	0.921	0.537	0.456	5.1e-58

TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)]

 Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
 Identities = 197/278 (70%), Positives = 233/278 (83%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I+GKWGCNNGQAC+SPD+I+TTK+
Sbjct:   205 MAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWGCNNGQACVSPDYILTTKE 264

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
             YAP            FYGKNP+ESKD+SRIVNSNHF RLSKLLD+ +VS KIV+GGE+D+
Sbjct:   265 YAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKLLDEKEVSDKIVYGGEKDR 324

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+SFD+I S  KPLAAYLFT+NK
Sbjct:   325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNK 384

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMGAYHGKFSFD FSHKKAVL R
Sbjct:   385 KLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444

Query:   241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 278
                GD  VRYPPY++GKLRLLK L+  ++  + + LLG
Sbjct:   445 SLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0009536 "plastid" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009269 "response to desiccation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)]

 Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
 Identities = 171/281 (60%), Positives = 212/281 (75%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             MAAAA++LTPV+LELGGK P + DS +NL+VA RR+I GKW CN+GQACI  D++ITTKD
Sbjct:   268 MAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRIIAGKWACNSGQACIGVDYVITTKD 327

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
             +A             F+G+N LESKDLSRIVNS HF RL  +L ++ V+ KIVHGG   +
Sbjct:   328 FASKLIDALKTELETFFGQNALESKDLSRIVNSFHFKRLESMLKENGVANKIVHGGRITE 387

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
             +KL+I+PT+LLDVP  S +M EEIFGPLLPI+TV KIED F +I S  KPLAAYLFTNNK
Sbjct:   388 DKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKPKPLAAYLFTNNK 447

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             +L++QFV+ VSAGG+ INDT +H+ V  LPFGGV ESG+GAYHGKFS++ FSHKK VL R
Sbjct:   448 ELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYR 507

Query:   241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK 281
              F GD  +RYPPYT  K  +LK L+S ++   I A  G+SK
Sbjct:   508 SFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAFFGFSK 548

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009536 "plastid" evidence=ISS

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0033721 "aldehyde dehydrogenase (NADP+) activity" evidence=IDA

TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 136/282 (48%), Positives = 183/282 (64%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIIT 57
             MAAAA+HLTPV LELGGK P + D      N+K   +R+  GKWG  NGQACIS D+++ 
Sbjct:   201 MAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQACISVDYVLI 260

Query:    58 TKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE 117
              K +AP            F+G+NP ES  LSRI N +H  RLS+LL D +V   IV+GG 
Sbjct:   261 EKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRVQASIVYGGS 320

Query:   118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
              D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV  I++S  IIN+  KPLA Y FT
Sbjct:   321 IDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKPKPLAIYAFT 380

Query:   178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
             N++ LK + +   S+G +  ND  +     +LPFGGV ESG+G YHGK+SFD FSH+KA+
Sbjct:   381 NDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAI 440

Query:   238 LSRGFIG-DVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 278
             +  G +G D+  RYPP+   KL  +++    +   +I  +LG
Sbjct:   441 ME-GSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

WB|WBGene00000110 alh-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 125/267 (46%), Positives = 172/267 (64%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             M AAAKHLTPV LELGGK PVV +   ++ ++ +R+  GKW  N GQ C++PD+I+    
Sbjct:   196 MTAAAKHLTPVTLELGGKCPVVVEDDADIDISAKRIAWGKW-LNCGQTCLAPDYILVNST 254

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
               P            FYG++   SKD +R++N  HF R+S LLD  K  G ++ GGERD+
Sbjct:   255 VKPKLVAAIRKYVNEFYGEDVKASKDYARMINQRHFDRISGLLD--KTQGAVLIGGERDR 312

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               L I PT+L DV +    M +EIFGP+LPI+TV    +S + I  G KPLAAY+FT N+
Sbjct:   313 ADLYIPPTVL-DVEKSDPFMHDEIFGPVLPIITVQSFSESLEYIADGEKPLAAYIFTRNE 371

Query:   181 -KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 239
              K+K+   ET S+GG+ +ND  +H+ V +LPFGGV  SGMG Y GK+ FD F+H+K+VL 
Sbjct:   372 AKVKRLLNET-SSGGVTVNDVLMHITVDTLPFGGVGVSGMGRYRGKYGFDTFTHEKSVLH 430

Query:   240 RGFIGD--VPVRYPPYTKGKLRLLKVL 264
             RGF G+  +  RYPP ++ KL  ++ L
Sbjct:   431 RGFFGESLLAARYPPLSQQKLDQMRRL 457

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2RPP8 ALDH3A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 589 (212.4 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 122/267 (45%), Positives = 162/267 (60%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             M AAAKHLTPV LELGGKSP   D   +L +ACRR+  GK+  N GQ CI+PD+++    
Sbjct:   287 MEAAAKHLTPVTLELGGKSPCYVDKDCDLDIACRRITWGKY-MNCGQTCIAPDYVLCEPS 345

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                            FYG+N  ES D  RI+N  HF R+  LL+  K++     GGE D+
Sbjct:   346 LQNQIVQKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA----FGGETDE 401

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                 IAPT+L DV  +S +M EEIFGP+LPI+ V   +++   INS  KPLA Y+F++N 
Sbjct:   402 ATRYIAPTILSDVDPESRVMQEEIFGPILPIVPVKNADEAIKFINSREKPLAFYIFSHND 461

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KL +Q +   S+GG+  ND  +H  + SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct:   462 KLVRQMINGTSSGGVTANDVIMHFTLSSLPFGGVGSSGMGAYHGKYSFDTFSHQRPCLLK 521

Query:   241 GFI--GDVPVRYPPYTKGKLRLLKVLI 265
                  G   +RYPP ++ K+   K  I
Sbjct:   522 SLKREGANKLRYPPNSQSKVDWAKFFI 548

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=IEA

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=IEA

GO:0046577 "long-chain-alcohol oxidase activity" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=IEA

GO:0008544 "epidermis development" evidence=IEA

GO:0007422 "peripheral nervous system development" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0006714 "sesquiterpenoid metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 123/267 (46%), Positives = 167/267 (62%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+    
Sbjct:   194 MEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIAPDYILCEAS 252

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                            FYG+N   S D  RI+N  HF R+  LL+  K++     GGE D+
Sbjct:   253 LQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA----FGGETDE 308

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                 IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPLA Y+F++N 
Sbjct:   309 ATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNN 368

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct:   369 KLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLK 428

Query:   241 GFIGDV--PVRYPPYTKGKLRLLKVLI 265
             G  G+    +RYPP ++ K+   K  +
Sbjct:   429 GLKGESVNKLRYPPNSESKVSWSKFFL 455

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

RGD|61866 Aldh3a2 "aldehyde dehydrogenase 3 family, member A2" [Rattus norvegicus (taxid:10116)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 123/267 (46%), Positives = 167/267 (62%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+    
Sbjct:   194 MEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIAPDYILCEAS 252

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                            FYG+N   S D  RI+N  HF R+  LL+  K++     GGE D+
Sbjct:   253 SQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA----FGGETDE 308

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                 IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPLA Y+F++N 
Sbjct:   309 ATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNN 368

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct:   369 KLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLK 428

Query:   241 GFIGDV--PVRYPPYTKGKLRLLKVLI 265
             G  G+    +RYPP ++ K+   K  +
Sbjct:   429 GLKGESVNKLRYPPNSESKVSWSKFFL 455

GO:0000302 "response to reactive oxygen species" evidence=IDA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA;ISO

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA;ISO

GO:0006714 "sesquiterpenoid metabolic process" evidence=IEA;ISO

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0007422 "peripheral nervous system development" evidence=IEA;ISO

GO:0008544 "epidermis development" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=IEA;ISO

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0046292 "formaldehyde metabolic process" evidence=IDA

GO:0046577 "long-chain-alcohol oxidase activity" evidence=IEA;ISO

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|P30839 Aldh3a2 "Fatty aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 123/267 (46%), Positives = 167/267 (62%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+    
Sbjct:   194 MEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIAPDYILCEAS 252

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                            FYG+N   S D  RI+N  HF R+  LL+  K++     GGE D+
Sbjct:   253 SQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA----FGGETDE 308

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                 IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPLA Y+F++N 
Sbjct:   309 ATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNN 368

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct:   369 KLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLK 428

Query:   241 GFIGDV--PVRYPPYTKGKLRLLKVLI 265
             G  G+    +RYPP ++ K+   K  +
Sbjct:   429 GLKGESVNKLRYPPNSESKVSWSKFFL 455

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

UNIPROTKB|F1NH33 ALDH3A2 "Aldehyde dehydrogenase" [Gallus gallus (taxid:9031)]

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 131/287 (45%), Positives = 175/287 (60%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             MAAAAKHLTPV LELGGKSP   D+  +L VACRR+  GK+  N GQ CI+PD+++    
Sbjct:   197 MAAAAKHLTPVTLELGGKSPCYIDTDCDLAVACRRIAWGKY-MNCGQTCIAPDYVLCHPS 255

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                            FYG++  +  D  RI+N  HF R+  LL+  K++    HGGE D+
Sbjct:   256 IQSQVVENIKATLQEFYGEDVKKCPDYERIINKRHFKRIMNLLEGQKIA----HGGETDE 311

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                 IAPT+L DV  +S +M EEIFGP+LPI++V  ++++ + IN   KPLA Y+F+NNK
Sbjct:   312 ASCFIAPTILTDVSVESKVMEEEIFGPVLPIVSVKNVDEAIEFINRREKPLALYVFSNNK 371

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KL ++ +   S+GG+  ND  +H  + SLPFGGV  SGMGAYHGK SFD FSH ++ L +
Sbjct:   372 KLIKRVISETSSGGVTGNDVIMHFFLASLPFGGVGNSGMGAYHGKHSFDTFSHHRSCLIK 431

Query:   241 GFI--GDVPVRYPPYTKGKLRLLKVLISGSL----LGIIR---ALLG 278
                  G   VRYPP ++ KL   K  I   L    +G+I    ALLG
Sbjct:   432 DLKMEGTNMVRYPPSSQKKLDWAKFFILKRLNVGRVGLITLALALLG 478

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008106 "alcohol dehydrogenase (NADP+) activity" evidence=IEA

MGI|MGI:1353452 Aldh3a2 "aldehyde dehydrogenase family 3, subfamily A2" [Mus musculus (taxid:10090)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 122/267 (45%), Positives = 165/267 (61%)

Query:     1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+    
Sbjct:   194 MEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRIAWGKY-MNCGQTCIAPDYILCEAS 252

Query:    61 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                            FYG+N   S D  RI+N  HF RL  LL   K++     GGE D+
Sbjct:   253 LQNQIVQKIKETVKDFYGENIKASPDYERIINLRHFKRLQSLLKGQKIA----FGGEMDE 308

Query:   121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                 +APT+L DV  +S +M EEIFGP+LPI++V  ++++ + IN   KPLA Y+F+ N 
Sbjct:   309 ATRYLAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVDEAINFINDREKPLALYVFSRNN 368

Query:   181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
             KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +
Sbjct:   369 KLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLK 428

Query:   241 GFIGDV--PVRYPPYTKGKLRLLKVLI 265
             G  G+    +RYPP ++ K+   K  +
Sbjct:   429 GLKGESVNKLRYPPNSESKVSWAKFFL 455

GO:0000302 "response to reactive oxygen species" evidence=ISO

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISO

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005634 "nucleus" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=ISO

GO:0006081 "cellular aldehyde metabolic process" evidence=ISO

GO:0006714 "sesquiterpenoid metabolic process" evidence=ISO

GO:0007417 "central nervous system development" evidence=ISO

GO:0007422 "peripheral nervous system development" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0008544 "epidermis development" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=ISO

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0046292 "formaldehyde metabolic process" evidence=ISO

GO:0046577 "long-chain-alcohol oxidase activity" evidence=ISO

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=ISO

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q70DU8	AL3H1_ARATH	1, ., 2, ., 1, ., 3	0.7302	0.9858	0.5743	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	1e-153
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	1e-149
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	1e-126
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	1e-125
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	1e-120
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	1e-115
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-112
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	1e-98
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	4e-97
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	7e-97
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	5e-68
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	2e-59
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	3e-52
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	5e-46
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-38
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	4e-37
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	1e-36
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	1e-34
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	1e-34
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	3e-33
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	2e-32
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	7e-32
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	8e-32
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	3e-31
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	3e-31
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	3e-31
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	5e-30
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	2e-29
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	2e-29
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	4e-29
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	6e-29
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	7e-29
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	5e-28
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	6e-28
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	4e-27
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	6e-27
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	7e-27
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	2e-26
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	3e-26
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	4e-26
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	7e-26
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	7e-26
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	1e-25
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	2e-25
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	4e-25
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-24
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-24
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	2e-24
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	2e-24
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-23
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	2e-23
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	4e-23
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	5e-23
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-22
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	2e-22
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	5e-22
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	2e-21
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	6e-21
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	7e-21
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	8e-21
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	9e-21
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	2e-20
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	7e-20
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	2e-19
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	2e-19
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	2e-19
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	2e-19
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	2e-19
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-18
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	2e-18
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	2e-18
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	4e-18
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	8e-17
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	4e-16
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	5e-16
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	7e-16
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	9e-16
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	2e-15
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	2e-15
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	2e-15
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	3e-15
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	1e-14
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	3e-14
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	6e-14
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	6e-14
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	2e-13
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	2e-13
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	8e-13
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	3e-11
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	7e-10
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	8e-10
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	2e-09
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	4e-08
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	1e-07
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	2e-07
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	1e-06
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-06
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	6e-06
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	8e-06
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	2e-05
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	3e-05
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	1e-04

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score =  436 bits (1123), Expect = e-153
 Identities = 204/280 (72%), Positives = 242/280 (86%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I GKWGCNNGQACISPD+I+TTK+
Sbjct: 205 MAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKE 264

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           YAPK+++++K ELE FYGKNP+ESKD+SRIVNS HF RLSKLLD+ +VS KIV+GGE+D+
Sbjct: 265 YAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDR 324

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
             L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+SFD+I S  KPLAAYLFT+NK
Sbjct: 325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNK 384

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           KLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMGAYHGKFSFD FSHKKAVL R
Sbjct: 385 KLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444

Query: 241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 280
              GD  VRYPPY++GKLRLLK L+  ++  I + LLG S
Sbjct: 445 SLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGLS 484

Length = 484

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  424 bits (1092), Expect = e-149
 Identities = 163/238 (68%), Positives = 195/238 (81%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV LELGGK PV+ DS ++LKVA RR+  GKWGCNNGQACI+PD+++  + 
Sbjct: 194 MAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEES 253

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           +AP L+++LKN LE F+G+NP ESKDLSRIVNS+HF RLS+LLDD  V+ KIVHGGERD+
Sbjct: 254 FAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDE 313

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
             L I PT+LLD P DS IM+EEIFGPLLPI+TV KIE+S +IINS  KPLAAY+FT NK
Sbjct: 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNK 373

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           +LK++ V   S+GG+  NDT V  A+ +LPFGGV ESG GAYHGKFSFD FSHKKAVL
Sbjct: 374 ELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  365 bits (939), Expect = e-126
 Identities = 136/262 (51%), Positives = 185/262 (70%), Gaps = 5/262 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP + D   NLK+A +R++ GK+  N GQ C++PD+++  + 
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTCVAPDYVLVHES 251

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              K ++ LK E++ FYG++PLES D  RI+N  HF RL+ LLD+    GKIV GG  D+
Sbjct: 252 VKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN----GKIVFGGNTDR 307

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
             L I PT+L +V  D  +M EEIFGP+LP+LT D ++++ +II S  KPLA YLF+ +K
Sbjct: 308 ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDK 367

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K++++ +E +S GG  INDT +HLA   LPFGGV  SGMG+YHGK+SFD FSHKK++L +
Sbjct: 368 KVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427

Query: 241 GFIGDVPVRYPPYTKGKLRLLK 262
               D+P+RYPPY   K +L K
Sbjct: 428 STWFDLPLRYPPYKGKKKKLKK 449

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  362 bits (931), Expect = e-125
 Identities = 126/238 (52%), Positives = 168/238 (70%), Gaps = 5/238 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP + D   NL+VA RR+  GK+  N GQ CI+PD+++  + 
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL-NAGQTCIAPDYVLVHES 251

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +L+E LK  ++ FYG++P ES D  RI+N  HF RL+ LLDD    GK+V GG+ DK
Sbjct: 252 IKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDD----GKVVIGGQVDK 307

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
            +  IAPT+L DV  DS +M EEIFGP+LPILT D ++++ + INS  KPLA YLF+ +K
Sbjct: 308 EERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDK 367

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
            ++++ +   S+GG+ +ND  +H A+ +LPFGGV  SGMGAYHGK  FD FSH K+VL
Sbjct: 368 AVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score =  351 bits (903), Expect = e-120
 Identities = 150/284 (52%), Positives = 194/284 (68%), Gaps = 3/284 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFD---SGINLKVACRRMIMGKWGCNNGQACISPDHIIT 57
           M AAAKHLTPV LELGGK P + D   S  + KVA  R++ GKWG   GQACI+ D+++ 
Sbjct: 201 MTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLV 260

Query: 58  TKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE 117
            + +AP L+E LK+ ++ F+G+NP ESK ++RI+N  HF RLS LL D +V+  IVHGG 
Sbjct: 261 EERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS 320

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            D+ KL I PT+LL+ P DS IM+EEIFGPLLPI+TV KIEDS   INS  KPLA Y FT
Sbjct: 321 IDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFT 380

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           NN+KLK++ +   S+G +  ND  +  A  SLPFGGV ESG G YHGK+SFD FSH+KAV
Sbjct: 381 NNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAV 440

Query: 238 LSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK 281
           L R  + +   RYPP+   KL  L+++      G++  LLG  +
Sbjct: 441 LRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLGLKR 484

Length = 484

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  338 bits (869), Expect = e-115
 Identities = 128/256 (50%), Positives = 174/256 (67%), Gaps = 7/256 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP   D   ++ VA RR+  GK+  N GQ CI+PD+++ T +
Sbjct: 193 MQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTCIAPDYVLCTPE 251

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              K +E+LK  L+ FYG++P ES D  RI+N  HF RL KLL      GK+  GG+ D+
Sbjct: 252 VQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS----GGKVAIGGQTDE 307

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
            +  IAPT+L DV     +M EEIFGP+LPI+TV+ ++++ + INS  KPLA Y+F+NNK
Sbjct: 308 KERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNK 367

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+  + +   S+GG+ +NDT +H  + SLPFGGV  SGMGAYHGK+SFD FSHK++ L +
Sbjct: 368 KVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVK 427

Query: 241 GFIGD--VPVRYPPYT 254
               +    +RYPPY+
Sbjct: 428 SLNMEKLNSLRYPPYS 443

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  331 bits (850), Expect = e-112
 Identities = 129/267 (48%), Positives = 179/267 (67%), Gaps = 5/267 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAA++LTP  LELGGKSPV+ D   NLKVA RR+  GK+  N GQ C++PD+++  + 
Sbjct: 202 MQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFL-NAGQTCVAPDYVLVHRS 260

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              K +E+LK  ++ F+G++P +S+D SRIVN  H  RL++L+ D    GK+V+GGE D 
Sbjct: 261 IKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHG--GKVVYGGEVDI 318

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               +APT++++   DS +M EEIFGP+LPILT + I++  + INS  KPLA Y F  +K
Sbjct: 319 ENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDK 378

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           + K+  +E  S+G +VIND   HL   +LPFGGV  SGMGAYHGK+ FD FSH K VL++
Sbjct: 379 RHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNK 438

Query: 241 GF--IGDVPVRYPPYTKGKLRLLKVLI 265
                 D+ +RYPPYT  K  +L  L+
Sbjct: 439 STGNSFDLSLRYPPYTSFKSWVLSFLL 465

Length = 493

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  295 bits (758), Expect = 1e-98
 Identities = 101/243 (41%), Positives = 143/243 (58%), Gaps = 6/243 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAA++LTPV LELGGKSP +     +L  A  R+  GK   N GQ C++PD+++  +D
Sbjct: 194 MRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL-NAGQTCVAPDYVLVPED 252

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH----GG 116
              + + + K  +   Y     ++ D + I+N  H+ARL  LL+D +  G  V      G
Sbjct: 253 KLEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAG 311

Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           E      ++ PTL+L+V  D  +M EEIFGP+LPILT D ++++ D IN+  +PLA Y F
Sbjct: 312 EDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYF 371

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
             +K  + + +    +GG+ INDT +H+A   LPFGGV  SGMGAYHGK  F  FSH K 
Sbjct: 372 GEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKP 431

Query: 237 VLS 239
           V  
Sbjct: 432 VFK 434

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  291 bits (748), Expect = 4e-97
 Identities = 113/241 (46%), Positives = 155/241 (64%), Gaps = 4/241 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHL  V LELGGKSP + D   +LK A +++  GK+  N GQ CI+PD++   + 
Sbjct: 193 MAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTCIAPDYVFVHES 251

Query: 61  YAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                +E LK E+E FYGK+     S DL+RIVN  HF RL  LLDD    G K+  GG+
Sbjct: 252 VKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ 311

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            D  +  IAPT+L +V  D  IM EEIFGP+LPI+T + +++  + IN+  KPLA Y+F+
Sbjct: 312 FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFS 371

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +K    + +   S+GG+V+ND  +H    +LPFGGV  SG+G+YHG + F  FSH++AV
Sbjct: 372 KDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAV 431

Query: 238 L 238
           L
Sbjct: 432 L 432

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  291 bits (746), Expect = 7e-97
 Identities = 112/237 (47%), Positives = 157/237 (66%), Gaps = 3/237 (1%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
            AAAKHLTPV LELGGKSPV+     +L++A +R++ GK+G N GQ C++PD+++     
Sbjct: 202 EAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFG-NAGQICVAPDYVLVDPSV 260

Query: 62  APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN 121
             + +E LK  L+ FY      S D +RIVN  HF RL  LLD  K  GK+V GGE D+ 
Sbjct: 261 YDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTK--GKVVIGGEMDEA 318

Query: 122 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 181
              I PT++ DV  D  +MSEE+FGP+LPI+ VD ++++  +INS   PLA Y+FT++K 
Sbjct: 319 TRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKS 378

Query: 182 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
                +    +GG+VINDT +H+ V + PFGGV +SG GAYHGK+ FD F+H++ V+
Sbjct: 379 EIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  217 bits (554), Expect = 5e-68
 Identities = 78/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAA++L  V LELGGKSP++     +L  A +  + G +G N GQ C +   ++  + 
Sbjct: 192 MRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG-NAGQVCTAASRLLVHES 250

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + +E L   ++     NPL+   D+  ++++    R+   ++D K  G K++ GG+R
Sbjct: 251 IYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKR 310

Query: 119 DKNKLR--IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
            +      + PT+L DV  D  I  EEIFGP+LP++     E++ ++ N     LAA +F
Sbjct: 311 LEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVF 370

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T + +   +  E + AG + IND +V  A  S PFGGV++SG+G   G +  + ++  K 
Sbjct: 371 TRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKT 429

Query: 237 VL 238
           V 
Sbjct: 430 VT 431

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  195 bits (499), Expect = 2e-59
 Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 2/241 (0%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
            AAAA +L PV LELGGKSP +     +L  A    + G +  N GQ C +   +I  + 
Sbjct: 229 AAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFF-NAGQRCTAASRLIVHES 287

Query: 61  YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
              + +E L     +    +PL  S DL  +++     R+   ++D    G  +  G + 
Sbjct: 288 VYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR 347

Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
                + PT+L  V  D  I  EEIFGP+LP++     E++ ++ N     LAA +FT +
Sbjct: 348 PGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRD 407

Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 239
                +    + AG + IND      +  LPFGGV++SG+G   GK+  + F+  K V  
Sbjct: 408 LARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTI 467

Query: 240 R 240
           +
Sbjct: 468 K 468

Length = 472

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  176 bits (449), Expect = 3e-52
 Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 7/241 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
             AAAK+L  V LELGGK+P +VFD   +L  A    + G +G N GQ C +   ++  +
Sbjct: 222 AKAAAKNLKRVTLELGGKNPLIVFDDA-DLDAAVEGAVFGAFG-NAGQVCTAGSRLLVHE 279

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + +E L    ++    +PL+   D+  +++     R+   ++D K  G K++ GGE
Sbjct: 280 SIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE 339

Query: 118 RDKNKLR-IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
               K   + PT+L DV  D  I  EEIFGP+L ++     +++ ++ N     LAA +F
Sbjct: 340 AGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVF 399

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           TN+ +   +    + AG + IND         LPFGG ++SG G   GK   + ++  K 
Sbjct: 400 TNDLERALRVARRLEAGMVWINDYTTGDPEA-LPFGGFKQSGFGREGGKEGLEEYTETKT 458

Query: 237 V 237
           V
Sbjct: 459 V 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  158 bits (401), Expect = 5e-46
 Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 59/238 (24%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAA++L PV LELGGKSPV+ D   +L  A    + G +  N GQ C +         
Sbjct: 188 MKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFF-NAGQICTAA-------- 238

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                                      SR+                     +VH    D+
Sbjct: 239 ---------------------------SRL---------------------LVHESIYDE 250

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
              ++  T+L+DV  D  I  EEIFGP+LP++     E++  + N     L A +FT + 
Sbjct: 251 FVEKLV-TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDL 309

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
               +  E + AG + IND+++ +     PFGGV+ SG+G   G +  + ++  K V+
Sbjct: 310 NRALRVAERLRAGTVYINDSSIGVGPE-APFGGVKNSGIGREGGPYGLEEYTRTKTVV 366

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  140 bits (355), Expect = 1e-38
 Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 8/243 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG--CNNGQACISPDHIITT 58
           MAAAA+ L PV+LELGGK P++  +  +L+ A    +   WG   N GQ CIS + +   
Sbjct: 213 MAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAV---WGAMVNAGQTCISVERVYVH 269

Query: 59  KDYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
           +    + +  L  +      G + +   D+  +  +     + + +DD    G K + GG
Sbjct: 270 ESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGG 329

Query: 117 ER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
            R +       PT+L DVP D  +M EE FGP+LP++ V   +++  + N     L+A +
Sbjct: 330 ARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASV 389

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
           F+ +    +     + AG + IND  +   + +LPFGGV++SG G  HG      F   K
Sbjct: 390 FSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPK 449

Query: 236 AVL 238
           A+ 
Sbjct: 450 AIA 452

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  136 bits (344), Expect = 4e-37
 Identities = 78/241 (32%), Positives = 117/241 (48%), Gaps = 8/241 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MA AA  +  V LELGG +P  VFD   +L  A    I  K+  N GQ C+  + I   +
Sbjct: 213 MAQAADTVKRVSLELGGNAPFIVFDD-ADLDKAVDGAIASKFR-NAGQTCVCANRIYVHE 270

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + +E L   ++     N L+   D+  ++N     ++  L++D    G K++ GG+
Sbjct: 271 SIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGK 330

Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R         PT+L DV  D LIM+EE FGP+ PI+  D  ++     N     LAAY+F
Sbjct: 331 RLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVF 390

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +     +  E + AG + IN   +  +    PFGGV+ESG+G   GK   + +   K 
Sbjct: 391 TRDLARAWRVAEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKY 448

Query: 237 V 237
           V
Sbjct: 449 V 449

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  134 bits (340), Expect = 1e-36
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 11/241 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              AAKHL PVLLELGGK+P +V +   +L  A    + G +  N+GQ C+S + II  +
Sbjct: 197 AETAAKHLKPVLLELGGKAPAIVLEDA-DLDAAANAALFGAF-LNSGQICMSTERIIVHE 254

Query: 60  DYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
             A + +E LK   E  +         L  +V++    R+ +L+DD    G K+V GG  
Sbjct: 255 SIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLA 310

Query: 119 DKNK--LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           D++     + PT+L +V  D  I SEE FGP++ I+ V   E++  I N     L+A +F
Sbjct: 311 DESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVF 370

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +        + + +G + IN   VH    +LP GGV+ SG G ++GK+  D F+  K 
Sbjct: 371 TRDLARALAVAKRIESGAVHINGMTVHDE-PTLPHGGVKSSGYGRFNGKWGIDEFTETKW 429

Query: 237 V 237
           +
Sbjct: 430 I 430

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  129 bits (327), Expect = 1e-34
 Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MAAAA+ LTPV+LELGGK P +V D   +L      ++ G +  ++GQ CI  + +I  +
Sbjct: 219 MAAAAESLTPVVLELGGKDPAIVLDD-ADLDQIASIIMRGTFQ-SSGQNCIGIERVIVHE 276

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               KLLE L + ++      PL+   D+  +++   F RL +L+ D    G +++ GG+
Sbjct: 277 KIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGK 336

Query: 118 R-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
           R             PTLL+DV  D  I  EE+FGP++ ++     E++ +I NS    L 
Sbjct: 337 RYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 225
           A +F  + K  ++    +  G + IND  V+  V  LPFGGV+ SG G + G+
Sbjct: 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGE 449

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  129 bits (326), Expect = 1e-34
 Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 12/241 (4%)

Query: 2   AAAAKHLTPVLLELGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
             A +HL  V LELGG +P++   D+ ++L V+      G +  + GQ C++   I+  +
Sbjct: 196 ELAGRHLKKVALELGGNNPLIVLDDADLDLAVSA--AAFGAF-LHQGQICMAAGRILVHE 252

Query: 60  DYAPKLLESLKNELENF-YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
               + +E L  + +    G +P +    +  ++N     R+  +++D   +G +++ GG
Sbjct: 253 SVYDEFVEKLVAKAKALPVG-DPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGG 311

Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             +    +  PT+L DV  D  I  EEIFGP+ P++  D  E++ ++ N     L+A +F
Sbjct: 312 TYEGLFYQ--PTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVF 369

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T + +    F E +  G + IND  V+   H  PFGGV+ SG G + G  S + F+  + 
Sbjct: 370 TRDLERAMAFAERLETGMVHINDQTVNDEPHV-PFGGVKASGGGRFGGPASLEEFTEWQW 428

Query: 237 V 237
           +
Sbjct: 429 I 429

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  125 bits (316), Expect = 3e-33
 Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 13/244 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
            AAAA++L  V LELGGK+P +  +  +L  A   ++ G +  N G+ C S   ++  + 
Sbjct: 215 AAAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHES 273

Query: 61  YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
            A   + ++          +PL     +  I+N    A+++  +D  +  G  ++ GGER
Sbjct: 274 IADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGER 333

Query: 119 D--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
                 L   PT+  DV  D  I  EEIFGP+L +LT D ++++  + N     L+A ++
Sbjct: 334 LASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVW 393

Query: 177 TNNKKLKQQFVETVSAGGLVIN---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
           + +          + AG + +N   D +       LPFGG ++SG+G   G++  + ++ 
Sbjct: 394 SKDIDTALTVARRIRAGTVWVNTFLDGSPE-----LPFGGFKQSGIGRELGRYGVEEYTE 448

Query: 234 KKAV 237
            K V
Sbjct: 449 LKTV 452

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  123 bits (312), Expect = 2e-32
 Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 6/215 (2%)

Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 67
           L  V LELG  + V+ D+  +L+ A  R + G +  N GQ CIS   I   +D   + LE
Sbjct: 224 LKKVTLELGSNAAVIVDADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLE 282

Query: 68  SLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI 125
                 +     +PL E  D+  +++     R+ + +++    G +++ GG+RD   L  
Sbjct: 283 RFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAIL-- 340

Query: 126 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 185
            PT+L DVP D  ++ EE+F P++ +   D ++++  + N     L A +FTN+ +   +
Sbjct: 341 EPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALK 400

Query: 186 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
               +  GG++IND++     H +P+GGV+ESG G
Sbjct: 401 AARELEVGGVMINDSSTFRVDH-MPYGGVKESGTG 434

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  122 bits (308), Expect = 7e-32
 Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 10/241 (4%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           AAA  +L  V LELGGKSP +VFD   +L  A      G +  N GQ C +   I   + 
Sbjct: 239 AAAKSNLKKVTLELGGKSPNIVFDDA-DLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQES 296

Query: 61  YAPKLLESLKNELENFYGKNPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + +E  K   E     +P +        V+   F ++   ++  K  G  ++ GGER
Sbjct: 297 IYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGER 356

Query: 119 DKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
             +K   I PT+  DV  D  I  EEIFGP++ IL     ++  +  N     LAA +FT
Sbjct: 357 HGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFT 416

Query: 178 NNKKLKQQFVETVSAGGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
            +     +    + AG + +N   V      ++PFGG ++SG G   G+   + ++  KA
Sbjct: 417 KDINKALRVSRALKAGTVWVNTYNVFD---AAVPFGGFKQSGFGRELGEEGLEEYTQVKA 473

Query: 237 V 237
           V
Sbjct: 474 V 474

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  122 bits (307), Expect = 8e-32
 Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 6/238 (2%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
             A +HL  + LELGGK+P++  +  +L  A R    G +  + GQ C+S   II  +  
Sbjct: 216 EKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPV 274

Query: 62  APKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
             + ++            +P +    +  +++     R+ + ++D    G K++ GG+ D
Sbjct: 275 YDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYD 334

Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
            N     PT+L DV  D  I  EE FGP+  ++     E++ ++ N     L+A + TN+
Sbjct: 335 GN--FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTND 392

Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +   +  E + +G + IND  +    H +PFGGV+ SG G   G++S + F+  K +
Sbjct: 393 LQRAFKLAERLESGMVHINDPTILDEAH-VPFGGVKASGFGREGGEWSMEEFTELKWI 449

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  120 bits (303), Expect = 3e-31
 Identities = 69/238 (28%), Positives = 125/238 (52%), Gaps = 8/238 (3%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDY 61
            A      + LELGG +PV+ D   +L  A   +  G  G  + GQ CIS   I   ++ 
Sbjct: 219 RANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKG--GFYHAGQVCISVQRIYVHEEL 276

Query: 62  APKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERD 119
             + +E+    ++     +PL+   D+  +++     R+ + +++  +   +++ GGERD
Sbjct: 277 YDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERD 336

Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
               +  PT+L DVPRD+ + +EE FGP++PI+  D  E++  I NS    L A +FT +
Sbjct: 337 GALFK--PTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRD 394

Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
             +  +  E +  GG+++ND++       +PFGGV+ESG+G     ++ +  + +K V
Sbjct: 395 LNVAFKAAEKLEVGGVMVNDSS-AFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTV 451

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  120 bits (303), Expect = 3e-31
 Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 20/249 (8%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACR---RMIMGKWGCNNGQACISPDHII 56
           M AAA +L PV LELGGK+P +VF    +L  A     R        NNG+ C++   I+
Sbjct: 213 MRAAAPNLKPVSLELGGKNPNIVFADA-DLDRAVDAAVRSSFS----NNGEVCLAGSRIL 267

Query: 57  TTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 114
             +    + LE      +     +PL    ++  +++  H  ++   ++  +  G  I+ 
Sbjct: 268 VQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILT 327

Query: 115 GGERDKNKLR-----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
           GG R +         + PT++  +  DS +  EEIFGP++ ++  D  E++ ++ N    
Sbjct: 328 GGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPY 387

Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSF 228
            LAAY++T +     +    + AG + +N   V  L     PFGGV+ SG+G   G +S 
Sbjct: 388 GLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDL---RTPFGGVKASGIGREGGDYSL 444

Query: 229 DVFSHKKAV 237
           + ++  K V
Sbjct: 445 EFYTELKNV 453

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  120 bits (302), Expect = 3e-31
 Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 5/219 (2%)

Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
           A      V LELGG  P++     +L+ A    + G++  N GQ C +   I+  ++   
Sbjct: 222 AGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYD 280

Query: 64  KLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKN 121
           K L+ L  +++     +PL ES DL  +++     R+  L++D  +  GKI++GG+RD+ 
Sbjct: 281 KFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEG 340

Query: 122 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 181
                PT+L +   D ++M EE+FGP+LPI  V   E++ +I NS    L A +FTN+  
Sbjct: 341 SF-FPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDIN 399

Query: 182 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
              +    + AGG+VIND+       +LPFGG ++SG+G
Sbjct: 400 RALKVARELEAGGVVINDSTR-FRWDNLPFGGFKKSGIG 437

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  117 bits (295), Expect = 5e-30
 Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 8/241 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MA AA  +  V LELGG +P +VFD   +L VA +  +  K+  N+GQ C+  + I+  +
Sbjct: 256 MAGAAATVKRVSLELGGNAPFIVFDDA-DLDVAVKGALASKFR-NSGQTCVCANRILVQE 313

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               K  E+    ++     +  E       ++N     ++   + D    G K++ GG+
Sbjct: 314 GIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK 373

Query: 118 RDKNKLRI-APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R         PT+L DV  D LI  EE+FGP+ P+      E++  I N     LAAY+F
Sbjct: 374 RHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIF 433

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T + +   +  E +  G + +N+  +   V   PFGGV++SG+G    K+  D +   K 
Sbjct: 434 TRDLQRAWRVSEALEYGIVGVNEGLISTEV--APFGGVKQSGLGREGSKYGIDEYLEIKY 491

Query: 237 V 237
           V
Sbjct: 492 V 492

Length = 498

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  115 bits (290), Expect = 2e-29
 Identities = 61/243 (25%), Positives = 121/243 (49%), Gaps = 11/243 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAA+++T V LELGGK+P +     +L +A + ++  +   N GQ C   + +   +D
Sbjct: 229 MEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRII-NCGQVCTCAERVYVHED 287

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + +E L  +++     +P ++  D+  +VN     ++ ++++    +G  ++ GG+R
Sbjct: 288 IYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKR 347

Query: 119 DKNK--LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
            + +      PT+L +V +D  I+ EEIFGP+LP++    ++++ ++ N     L +Y++
Sbjct: 348 PEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIY 407

Query: 177 TNNKKLKQQFVETVSAGGLVINDTA--VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           T N     +    +  G   IN          H+    G ++SG+G   GK   + +   
Sbjct: 408 TENLNTAMRATNELEFGETYINRENFEAMQGFHA----GWKKSGLGGADGKHGLEEYLQT 463

Query: 235 KAV 237
           K V
Sbjct: 464 KVV 466

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  115 bits (289), Expect = 2e-29
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 17/250 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             AAA  L PV LELGGKSP++     +L  A    I G      GQ+C +   +   +D
Sbjct: 212 YRAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHED 271

Query: 61  YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV--SGKIVHGGE 117
                LE L  +L      +PL E+ D+  I++   FA++   +D         ++ GG 
Sbjct: 272 IYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGP 331

Query: 118 -----RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
                   +   + PT+   V  +  +  EEIFGP+L  +     ++   + N     LA
Sbjct: 332 LPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLA 391

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF---- 228
           AY++T +     +    + AG + +N            +GG ++SG+G    + S     
Sbjct: 392 AYVWTRDLGRALRAAHALEAGWVQVNQGGGQQP--GQSYGGFKQSGLGR---EASLEGML 446

Query: 229 DVFSHKKAVL 238
           + F+ KK V 
Sbjct: 447 EHFTQKKTVN 456

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  114 bits (287), Expect = 4e-29
 Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 38/255 (14%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFDSGINL----KVACR-RMIMGKWGCNNGQACISPDHI 55
           A A K+L   +LELGG  P +V D   +L    K A + R+       N GQ+CI+    
Sbjct: 192 AEAGKNLKKSVLELGGSDPFIVLDDA-DLDKAVKTAVKGRLQ------NAGQSCIAAKRF 244

Query: 56  ITTKDYAPKLLESLKNELENF-----------YGKNPLESKDLSRIVNSNHFARLSKLLD 104
           I  +D   + LE     +               G  PL  KDL           L + ++
Sbjct: 245 IVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLG--PLARKDL--------RDELHEQVE 294

Query: 105 DDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 162
           +   +G  ++ GG+R D       PT+L DV        EE+FGP+  ++ V   E++  
Sbjct: 295 EAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIA 354

Query: 163 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 222
           + N     L   +FT + +  ++    + AG + IN          LPFGGV+ SG G  
Sbjct: 355 LANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDP--RLPFGGVKRSGYGRE 412

Query: 223 HGKFSFDVFSHKKAV 237
            G+F    F + K V
Sbjct: 413 LGRFGIREFVNIKTV 427

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  114 bits (286), Expect = 6e-29
 Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 8/241 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  AA +L  V LELGGKS  +VF    +L  A R    G +  N GQ C +   ++  +
Sbjct: 213 MQGAAGNLKRVSLELGGKSANIVFADA-DLDAAVRAAATGIFY-NQGQMCTAGSRLLVHE 270

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + LE   +   +    +PL+ K  +  +V+   F R+   +D  +  G +++ GG+
Sbjct: 271 SIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGK 330

Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R   +   + PT+   VP +  I  EEIFGP++ ++     E++  I N     LAA ++
Sbjct: 331 RPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVW 390

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +     +    + AG + IN T       S PFGG ++SG G   G+ + D ++  K+
Sbjct: 391 TRDLGRAHRVAAALKAGTVWIN-TYNRFDPGS-PFGGYKQSGFGREMGREALDEYTEVKS 448

Query: 237 V 237
           V
Sbjct: 449 V 449

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  113 bits (286), Expect = 7e-29
 Identities = 76/247 (30%), Positives = 119/247 (48%), Gaps = 16/247 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVF-DSGINLKVACRRMIMGKWGC--NNGQACISPDHII 56
           M AAA+ + PV LELGGKSP +VF D+ +   V      M   GC  NNGQ C +   ++
Sbjct: 216 MQAAAQDIKPVSLELGGKSPIIVFDDADLEKAV---EWAMF--GCFWNNGQICSATSRLL 270

Query: 57  TTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVH 114
             +  A   LE L    E     +PLE    L  +V+   + ++   +   K  G +++ 
Sbjct: 271 VHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLC 330

Query: 115 GGERDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
           GG R  +  +   IAPT+  DVP DS I  EEIFGP+L + +    +++  + N     L
Sbjct: 331 GGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGL 390

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           AA + + + +   +  E + AG + IN           P+GG + SG+G   G++  D +
Sbjct: 391 AAAVISRDAERCDRVAEALEAGIVWIN--CSQPCFPQAPWGGYKRSGIGRELGEWGLDNY 448

Query: 232 SHKKAVL 238
              K + 
Sbjct: 449 LEVKQIT 455

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  111 bits (280), Expect = 5e-28
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 15/246 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVF---DSGINLKVACRRMIMGKWGCNNGQACISPDHII 56
           M AAA+++ PV LELGGKSP +VF   D    L V    +I      N GQ C +   ++
Sbjct: 213 MRAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQ-----NAGQTCSAGSRLL 267

Query: 57  TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 115
             +    ++LE L            LE  DL  ++++    R+   +   +  G +IV G
Sbjct: 268 VHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAG 327

Query: 116 GERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
           G   +        +APTLL DVP DS +  EEIFGP+L ++  D   ++  + N     L
Sbjct: 328 GRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGL 387

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
            A ++T +     +    + AG + +N+      +  LPFGGV++SG G   G  +   +
Sbjct: 388 VAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGI-ELPFGGVKKSGHGREKGLEALYNY 446

Query: 232 SHKKAV 237
           +  K V
Sbjct: 447 TQTKTV 452

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  111 bits (279), Expect = 6e-28
 Identities = 70/236 (29%), Positives = 121/236 (51%), Gaps = 6/236 (2%)

Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
           A +HL  V LELGG +P V     ++  A    + GK+  + GQ C++ + II  +D   
Sbjct: 230 AGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFL-HQGQICMAINRIIVHEDVYD 288

Query: 64  KLLESLKNELENFYGKNPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN 121
           + +E     ++     +P +   +   ++N +    L   ++     G  ++ GGE + N
Sbjct: 289 EFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGN 348

Query: 122 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 181
            L   PT+L DV  D  I  EEIFGP+ PI+  D  E++ ++ N     L+  +FT++ +
Sbjct: 349 VL--EPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLE 406

Query: 182 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
              QF   + AG   IND  V+   H +PFGG + SG+G ++G+++ + F+  K +
Sbjct: 407 RGVQFARRIDAGMTHINDQPVNDEPH-VPFGGEKNSGLGRFNGEWALEEFTTDKWI 461

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  109 bits (273), Expect = 4e-27
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 18/254 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M   A  L    +ELGGKSPV VFD   +L+ A   ++   +   NG+ C +   ++  +
Sbjct: 231 MRNGADTLKRFSMELGGKSPVIVFDDA-DLERALDAVVFMIFS-FNGERCTASSRLLVQE 288

Query: 60  DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A   +E L   +      +PL+   ++  +++  H A++   ++  +  G  I+ GGE
Sbjct: 289 SIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGE 348

Query: 118 RDKNKLR--------IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
           R              + PT+         I  EEIFGP+L ++     E++ +  N    
Sbjct: 349 RAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRY 408

Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSF 228
            LA Y++TN+     +    + AG + +N   V HL     PFGGV+ SG+G   G +SF
Sbjct: 409 GLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPT---PFGGVKASGIGREGGTYSF 465

Query: 229 DVFSHKKAV-LSRG 241
           D ++  K V L+ G
Sbjct: 466 DFYTETKNVALALG 479

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  108 bits (272), Expect = 6e-27
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 28/253 (11%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC-----NNGQACISPDH 54
           M AAA++L  V LE GGKSP +VF+   +L  A       KW       N+GQ C +   
Sbjct: 240 MKAAAQNLKAVTLECGGKSPALVFEDA-DLDQAV------KWAAAGIMYNSGQNCTATSR 292

Query: 55  IITTKDYAPKLLESLKNEL-ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-K 111
           I   +    K +E     + +N+   +P +    +   V+   + R+   ++  K  G K
Sbjct: 293 IYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK 352

Query: 112 IVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 167
           +V+GGE+    L     I PT+  DVP+D  I+ EEIFGP++ I      E++    N  
Sbjct: 353 LVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDT 412

Query: 168 TKPLAAYLFTNNKKLKQQFVETVSAGGLVIN---DTAVHLAVHSLPFGGVQESGMGAYHG 224
           T  LAA +FT + +   +    + AG + IN   D+ V      +PFGG + SG+G   G
Sbjct: 413 TYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVG-----VPFGGFKMSGIGRELG 467

Query: 225 KFSFDVFSHKKAV 237
           ++  + ++  KAV
Sbjct: 468 EYGLETYTQTKAV 480

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  108 bits (271), Expect = 7e-27
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 8/235 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  +A  +  V +ELGG +P +VFD   +L  A    +  K+  N GQ C+  + +    
Sbjct: 214 MKQSASTVKKVSMELGGNAPFIVFDDA-DLDQAVEGAMASKFR-NAGQTCVCANRLYVHD 271

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +  + L   ++     N L+       ++N     ++ K + D    G K+V GG+
Sbjct: 272 GIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGK 331

Query: 118 R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R +       PT+L +V  D L+  EE FGPL P+   D  E+   I N     LAAY F
Sbjct: 332 RHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFF 391

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           + +     +  E +  G + IN   +  +    PFGGV++SG+G    K+  + +
Sbjct: 392 SRDLSRIWRVAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEY 444

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  106 bits (267), Expect = 2e-26
 Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
            AA +HL  V LELGGK+ ++     +L +A      G +  + GQ C++    +  +  
Sbjct: 207 EAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFL-HQGQICMAAGRHLVHESV 265

Query: 62  APKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
           A      L  + ++    +P   +  L  ++N+    R+  ++DD   +G ++  GG  D
Sbjct: 266 ADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTYD 325

Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
              L   PT+L  V        EEIFGP+ P+   D  E++  + N     L+A + + +
Sbjct: 326 G--LFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRD 383

Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
                   + +  G L IND  V+   H+ PFGG+  SG G+  G
Sbjct: 384 VGRAMALADRLRTGMLHINDQTVNDEPHN-PFGGMGASGNGSRFG 427

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  106 bits (267), Expect = 3e-26
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 12/244 (4%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFDSG-INLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           AAAA     V LE+GGK+P VV D   ++L V C   + G +  + GQ C +   +I T+
Sbjct: 232 AAAAARGARVQLEMGGKNPLVVLDDADLDLAVEC--AVQGAFF-STGQRCTASSRLIVTE 288

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + +E+L    +     + L+   D+  +V+     +  + ++  +  G K+V+GGE
Sbjct: 289 GIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGE 348

Query: 118 RDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R K       +AP L   V  D  I  EEIFGP+  ++ V   +++  I N     L+A 
Sbjct: 349 RLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAG 408

Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKFSFDVFSH 233
           + T + K    F   V AG +++N     +  H +PFGG + S  G    G+ + + ++ 
Sbjct: 409 IVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYH-VPFGGRKGSSYGPREQGEAALEFYTT 467

Query: 234 KKAV 237
            K V
Sbjct: 468 IKTV 471

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  106 bits (266), Expect = 4e-26
 Identities = 65/224 (29%), Positives = 116/224 (51%), Gaps = 17/224 (7%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
           A  K    V+LELGG + V+ DS  +L  A +R+I G +    GQ+CIS   ++  +   
Sbjct: 221 AGKKK---VVLELGGNAAVIVDSDADLDFAAQRIIFGAFY-QAGQSCISVQRVLVHRS-- 274

Query: 63  PKLLESLKNELENFYGK----NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
             + +  K+ L          +P +   D+  +++ +   R+   +++   +G K++ GG
Sbjct: 275 --VYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGG 332

Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           +RD   L   PT+L DVP D  +  EE+FGP++ +   D  +++   +N     L A +F
Sbjct: 333 KRDGALL--EPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVF 390

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
           T + +   +  + +  GG+VIND      V  +P+GGV++SG+G
Sbjct: 391 TRDLEKALRAWDELEVGGVVINDVPT-FRVDHMPYGGVKDSGIG 433

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  105 bits (265), Expect = 7e-26
 Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 29/251 (11%)

Query: 3   AAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           +   +L  V LE GGKSP +VF    +L  A      G +  N G+ C +   ++  +  
Sbjct: 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFW-NQGEVCSAGSRLLVHESI 281

Query: 62  APKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
             + LE +      +   +PL+ +  +  +V+  HF ++   ++  K  G ++V GG+R 
Sbjct: 282 KDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRV 341

Query: 120 KNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             +     + PT+   V  D  I  EEIFGP+L ++T D  E++  + N     LAA ++
Sbjct: 342 LTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW 401

Query: 177 TNN--------KKLK--QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKF 226
           T++        ++L+    +V     G +            + PFGG ++SG G      
Sbjct: 402 TSDLSRAHRVARRLRAGTVWVNCFDEGDI------------TTPFGGFKQSGNGRDKSLH 449

Query: 227 SFDVFSHKKAV 237
           + D ++  K  
Sbjct: 450 ALDKYTELKTT 460

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  105 bits (264), Expect = 7e-26
 Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 14/247 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
               A+    V LE+GGK+P++     +L +A    +   +G   GQ C +   +I  + 
Sbjct: 231 GETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFG-TTGQRCTATSRLIVHES 289

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + L+      +     + L+ + D+  ++N     ++    +  K  G  ++ GGER
Sbjct: 290 VYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGER 349

Query: 119 -DKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
                      + PT+  DV  D  I  EEIFGP++ ++ V  +E++ +I N     L++
Sbjct: 350 LTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSS 409

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH---GKFSFDV 230
            ++T +     +    + AG   +N   +   VH LPFGGV++SG G  H   G  + D 
Sbjct: 410 AIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVH-LPFGGVKKSGNG--HREAGTTALDA 466

Query: 231 FSHKKAV 237
           F+  KAV
Sbjct: 467 FTEWKAV 473

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  105 bits (263), Expect = 1e-25
 Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 8/243 (3%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
             AA  LT V LELGGK+   F    ++      ++   +  + GQ C +P+     +  
Sbjct: 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSK 296

Query: 62  APKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER- 118
             +L+  LK  L +F   +P+ ES     + N  HF ++   LDD +  G +IV GGE  
Sbjct: 297 FDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEAL 356

Query: 119 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
                 + PTL+L    DS +M EE FGP++  +  +  E+   +IN     L A ++TN
Sbjct: 357 AGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTN 416

Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           N     +++  + AG + +N   +H  +  ++PFGG+++SG+G   G    D ++  K+V
Sbjct: 417 NLSKALRYIPRIEAGTVWVN---MHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473

Query: 238 LSR 240
           + R
Sbjct: 474 MIR 476

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  104 bits (261), Expect = 2e-25
 Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 22/236 (9%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACIS------PD 53
           MA+AAK L  V LELGG    +V    +++     ++  G +  N+GQ C +       +
Sbjct: 208 MASAAKTLKRVTLELGGNDAAIVLP-DVDIDAVAPKLFWGAFI-NSGQVCAAIKRLYVHE 265

Query: 54  HIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-K 111
            I     Y  +  E+L    +     + L+    L  + N   + ++ +L++D K  G K
Sbjct: 266 SI-----YD-EFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAK 319

Query: 112 IVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 170
           ++ GGE        I PT++ D P  S I+ EE FGP+LP+L     ++     N     
Sbjct: 320 VLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYG 379

Query: 171 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGK 225
           L A +++++ +  +     + AG + IN    H A+    PFGG ++SG+G   G 
Sbjct: 380 LGASVWSSDLERAEAVARRLEAGTVWINT---HGALDPDAPFGGHKQSGIGVEFGI 432

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  103 bits (258), Expect = 4e-25
 Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 12/243 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MAAAA HL  V +ELGGKSP +VFD   +L+ A    ++G +  + GQ C +   +   K
Sbjct: 229 MAAAAGHLKHVTMELGGKSPLIVFDDA-DLESAVDGAMLGNF-FSAGQVCSNGTRVFVHK 286

Query: 60  DYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + L  L    E     +P  E+ ++  ++++ H  ++   ++  K  G  +  GG 
Sbjct: 287 KIKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGG 346

Query: 118 RDKNK-----LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
           R +N        + PT+  D   D  I+ EEIFGP++ +LT    ++     N     LA
Sbjct: 347 RPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLA 406

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
             +FT +     +  + + AG + IN    +L     PFGG ++SG+G  +GK +   ++
Sbjct: 407 GGVFTADLGRAHRVADQLEAGTVWINT--YNLYPAEAPFGGYKQSGIGRENGKAALAHYT 464

Query: 233 HKK 235
             K
Sbjct: 465 EVK 467

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  102 bits (256), Expect = 1e-24
 Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 12/244 (4%)

Query: 2   AAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
            AAA++L PV LELGGKSP  VFD   +L  A   ++ G +    GQ C++   ++  + 
Sbjct: 216 RAAAENLAPVTLELGGKSPNIVFDDA-DLDAAVNGVVAGIFA-AAGQTCVAGSRLLVQRS 273

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + +E L          +PL+ +  +  +       ++ + +   +  G +++ GGER
Sbjct: 274 IYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGER 333

Query: 119 DKNKLR-----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
                        PT+L DV  D  I  EE+FGP+L ++  D  E++  + N     LAA
Sbjct: 334 PSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAA 393

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
            ++T +     +    + AG + +N         S PFGG ++SG+G  +G  +   ++ 
Sbjct: 394 GIWTRDLARAHRVARAIEAGTVWVNT--YRALSPSSPFGGFKDSGIGRENGIEAIREYTQ 451

Query: 234 KKAV 237
            K+V
Sbjct: 452 TKSV 455

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  102 bits (255), Expect = 1e-24
 Identities = 77/246 (31%), Positives = 126/246 (51%), Gaps = 17/246 (6%)

Query: 1   MAAAAK-HLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 58
           M AAAK +L  V LELGGKSP +VFD   +L+ A      G +  N+GQ C +   I   
Sbjct: 240 MEAAAKSNLKKVTLELGGKSPNIVFDDA-DLESAVVWTAYGIF-FNHGQVCCAGSRIYVQ 297

Query: 59  KDYAPKLLESL-----KNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIV 113
           +    K ++       K ++ + + ++  +   +S+I     + R+   ++  K  G  V
Sbjct: 298 EGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQI----QYERIMSYIESGKAEGATV 353

Query: 114 H-GGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
             GG+R  N+   I PT+  DV  D  I+ EEIFGP++ ++     E++    N  T  L
Sbjct: 354 ETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGL 413

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           AA +FTNN     +    + AG + +N    +L  H +PFGG ++SG+G   G+++ + +
Sbjct: 414 AAAVFTNNINNAIRVANALKAGTVWVN--CYNLLHHQVPFGGYKQSGIGRELGEYALENY 471

Query: 232 SHKKAV 237
           +  KAV
Sbjct: 472 TQIKAV 477

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  101 bits (254), Expect = 2e-24
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 11/248 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M+AAAK +  V LELGGKSP++     +L+ A    +M  +  + GQ C +   +   + 
Sbjct: 211 MSAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRS 269

Query: 61  YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              +  E L    +     +PL E   +  +++  H  ++   ++  K  G K++ GGER
Sbjct: 270 IKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGER 329

Query: 119 --DKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
              ++ L     ++P +L D   D  I+ EEIFGP++ IL  D  E+     N  T  LA
Sbjct: 330 VVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLA 389

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
           A +FT + +   + +  + AG   IN   +      +PFGG ++SG G  +G  + + ++
Sbjct: 390 AGVFTRDLQRAHRVIAQLQAGTCWINTYNISPV--EVPFGGYKQSGFGRENGTAALEHYT 447

Query: 233 HKKAVLSR 240
             K V   
Sbjct: 448 QLKTVYVE 455

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  100 bits (252), Expect = 2e-24
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 15/201 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSP--VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 58
           MAAAAK++T V LELGGK+P  V+ D+ ++L V   + I+     N+GQ C   + +   
Sbjct: 167 MAAAAKNITKVCLELGGKAPAIVMDDADLDLAV---KAIVDSRVINSGQVCNCAERVYVQ 223

Query: 59  KDYAPKLLESLKNELENFYGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHG 115
           K    + +  L   ++     NP E  D++   ++N+    R+ + +      G ++  G
Sbjct: 224 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALG 283

Query: 116 GERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           G+  + K     PTLLLDV ++  IM EE FGP+LP++  D +E++  + N     L + 
Sbjct: 284 GKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSS 343

Query: 175 LFTNN-----KKLKQ-QFVET 189
           ++T N     K +K  +F ET
Sbjct: 344 IYTQNLNVAMKAIKGLKFGET 364

Length = 409

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 99.4 bits (248), Expect = 1e-23
 Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 23/267 (8%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKW---GC--NNGQACISPDH 54
           M AAA+ + PV LELGGKSP +VFD  ++L  A       +W   GC   NGQ C +   
Sbjct: 247 MTAAAQMVKPVSLELGGKSPIIVFDD-VDLDKAV------EWAMFGCFWTNGQICSATSR 299

Query: 55  IITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KI 112
           ++  +  A + LE L    +N    +PLE    L  +V+   + ++ K +   K  G  I
Sbjct: 300 LLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATI 359

Query: 113 VHGGERDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
           + GG+R ++  +   I PT++ DV     I  EE+FGP+L + T    +++ ++ N    
Sbjct: 360 LCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHY 419

Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 229
            LA  + +N+ +  ++  E   AG + IN +         P+GG++ SG G   G++  +
Sbjct: 420 GLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFC--QAPWGGIKRSGFGRELGEWGLE 477

Query: 230 VFSHKKAVLSRGFIGDVPVR-YPPYTK 255
            +   K V    +I D P   YPP +K
Sbjct: 478 NYLSVKQVTK--YISDEPWGWYPPPSK 502

Length = 503

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 98.8 bits (247), Expect = 2e-23
 Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 9/222 (4%)

Query: 6   KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 65
           K L  V+ E+GGK+ ++ D   +L  A   ++   +G   GQ C +   +I  +    + 
Sbjct: 273 KWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQ-GQKCSACSRVIVHESVYDEF 331

Query: 66  LESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 124
           LE L    +     +P + +  +  +++     R+ + ++  K  G+++ GGE  +    
Sbjct: 332 LERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAE 391

Query: 125 ---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 181
              + PT+  DVP D  +  EEIFGP+L ++     +++ +I N     L   +F+ + +
Sbjct: 392 GYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPE 451

Query: 182 LKQQFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESGMGA 221
             ++       G L  N   T   +     PFGG + SG G+
Sbjct: 452 HLERARREFEVGNLYANRKITGALVGRQ--PFGGFKMSGTGS 491

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 97.8 bits (244), Expect = 4e-23
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 15/247 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG---KWGCNNGQACISPDHIIT 57
           M AAA+ +  V LELGGK+ ++     + + A    + G    W    GQ+C S   +  
Sbjct: 211 MRAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTW---CGQSCGSTSRLFV 267

Query: 58  TKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 115
            +    ++L  +   +      +P   +  +  +V+   + R+   +D  K  G ++V G
Sbjct: 268 HESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTG 327

Query: 116 GERDKNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 170
           G R +         + PT+  DV     I  EEIFGP+L +L      +     N     
Sbjct: 328 GGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYG 387

Query: 171 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 230
           L A ++TN+     +    V AG + IN ++ H      PFGGV+ SG+G          
Sbjct: 388 LTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFL--GAPFGGVKNSGIGREECLEELLS 445

Query: 231 FSHKKAV 237
           ++ +K V
Sbjct: 446 YTQEKNV 452

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 97.4 bits (243), Expect = 5e-23
 Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 9/243 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
             AAA  L  V LELGGK+PV VFD   +L  A   +    +  N GQ C +   +   +
Sbjct: 213 ARAAADTLKRVHLELGGKAPVIVFDD-ADLDAAVAGIATAGY-YNAGQDCTAACRVYVHE 270

Query: 60  DYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 118
               + + +L   +     G    E  ++  + ++    R++  ++      +++ GG R
Sbjct: 271 SVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRR 330

Query: 119 -DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            +       PT++  V +D  I+ EEIFGP++ +   D  +++ ++ N     LA+ ++T
Sbjct: 331 AEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWT 390

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKA 236
            +     +    +  G + +N    H+ + + +P GG ++SG G     ++ + ++  K 
Sbjct: 391 RDVGRAMRLSARLDFGTVWVNT---HIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKH 447

Query: 237 VLS 239
           V+ 
Sbjct: 448 VMV 450

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 96.4 bits (241), Expect = 1e-22
 Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 30/254 (11%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
             AAA  +  V LELGGKS  ++ D   +L+ A  R +   +  N+GQ+C +P  ++  +
Sbjct: 226 AEAAADTVKRVALELGGKSANIILDDA-DLEKAVPRGVAACFA-NSGQSCNAPTRMLVPR 283

Query: 60  DYAPKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKI------ 112
               +  E      E +   +P +    L  + ++  F         D+V G I      
Sbjct: 284 SRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQF---------DRVQGYIQKGIEE 334

Query: 113 ----VHGG-ERDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 164
               V GG  R +   R   + PT+  DV  D  I  EEIFGP+L I+  D  +++  I 
Sbjct: 335 GARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIA 394

Query: 165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
           N     LA Y+++ + +  +     + AG + IN  A +      PFGG ++SG G   G
Sbjct: 395 NDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAAFNPG---APFGGYKQSGNGREWG 451

Query: 225 KFSFDVFSHKKAVL 238
           ++  + F   K++ 
Sbjct: 452 RYGLEEFLEVKSIQ 465

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 96.1 bits (239), Expect = 2e-22
 Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 5/219 (2%)

Query: 10  PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL 69
            + +E GGK+ ++ D   + ++    +++  +G   GQ C +   +I T+     +LE L
Sbjct: 265 RLYVETGGKNAIIVDETADFELVVEGVVVSAFG-FQGQKCSAASRLILTQGAYEPVLERL 323

Query: 70  KNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAP 127
               E      P E+  DL  ++++   A++   ++  K  G++V GG+R +     +AP
Sbjct: 324 LKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAP 383

Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 185
           T++ +VP  + I  EEIFGP+L ++    D   ++ ++ NS    L   +++  ++  ++
Sbjct: 384 TVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEE 443

Query: 186 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
                  G L IN       V   PFGG + SG  A  G
Sbjct: 444 ARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 94.6 bits (236), Expect = 5e-22
 Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 10/243 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MA AA  L  VLLELGGKS  +V D   +L  A    +      N GQ C     ++  +
Sbjct: 219 MAQAAATLKRVLLELGGKSANIVLD-DADLAAAAPAAVGV-CMHNAGQGCALTTRLLVPR 276

Query: 60  DYAPKLLESLKNELENFYGKNPLESKDLS-RIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +++E+L    E     +P +   +   ++++    R+   +   +  G ++V GG 
Sbjct: 277 SRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGG 336

Query: 118 RDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R     +   + PTL  DV  D  I  EEIFGP+L ++  D  +++  I N     L+  
Sbjct: 337 RPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGG 396

Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           +++ +     +    +  G + IN         + PFGG ++SG+G  +G    + F   
Sbjct: 397 VWSADVDRAYRVARRIRTGSVGIN-GGGGYGPDA-PFGGYKQSGLGRENGIEGLEEFLET 454

Query: 235 KAV 237
           K++
Sbjct: 455 KSI 457

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 93.0 bits (231), Expect = 2e-21
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 3/221 (1%)

Query: 6   KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 65
           KHL  V+ E+GGK  V+ D   ++++A +      +G   GQ C +    +  +    ++
Sbjct: 274 KHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFA-GQKCSAGSRAVVHEKVYDEV 332

Query: 66  LESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-L 123
           +E      E+   G        +  +++   F ++ + ++  K  G++V GG  D +K  
Sbjct: 333 VERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGY 392

Query: 124 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 183
            I PT+  DV R + +  EEIFGP++  +     +++ +I N+    L   + +NN+   
Sbjct: 393 FIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHI 452

Query: 184 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
            +       G L  N       V   PFGG + SG  +  G
Sbjct: 453 NRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAG 493

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 91.6 bits (228), Expect = 6e-21
 Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 13/249 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVA-CRRMIMGKWGC--NNGQACISPDHII 56
           M  AA++L PV LELGGKSP + FD  ++       +   G+ G   N G+ C  P   +
Sbjct: 231 MQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRAL 290

Query: 57  TTKDYAPKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVH 114
             +    + +E      E     NPL+ +  +   V+ +   ++   +D  K  G +++ 
Sbjct: 291 VQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLT 350

Query: 115 GGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
           GGER             PTL+     D  I  EEIFGP+L ++T    E++  I N    
Sbjct: 351 GGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEY 410

Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 229
            L   ++T +     +    +  G + +N    H      PFGG ++SG+G    K   D
Sbjct: 411 GLGGGVWTRDINRALRVARGIQTGRVWVN--CYHQYPAHAPFGGYKKSGIGRETHKMMLD 468

Query: 230 VFSHKKAVL 238
            +   K +L
Sbjct: 469 HYQQTKNIL 477

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 91.4 bits (227), Expect = 7e-21
 Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 12/244 (4%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
           AAAK L P  LELGGKS  +     N   A     +G    N GQ C +   I   +   
Sbjct: 233 AAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIY 291

Query: 63  PKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-- 118
            + +  LK + EN    NPL+    +   VN +   ++   +D  K  G KI+ GG R  
Sbjct: 292 DEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLT 351

Query: 119 ----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
               DK    I PTL+++V  D  +  EEIFGP+  ++     ++  D+ N     L   
Sbjct: 352 ENGLDKGFF-IEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGG 410

Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           +FT +     +    V  G + +N T   +   + PFGG ++SG+G    K   D ++  
Sbjct: 411 VFTKDINRALRVARAVETGRVWVN-TYNQIPAGA-PFGGYKKSGIGRETHKSMLDAYTQM 468

Query: 235 KAVL 238
           K + 
Sbjct: 469 KNIY 472

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 91.1 bits (227), Expect = 8e-21
 Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 5/230 (2%)

Query: 10  PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL 69
            ++LELGGK P +     +L++A + ++ G     +GQ C +   ++  +  A +L+E L
Sbjct: 244 RLVLELGGKDPAIVLPDADLELAAKEIVKGALS-YSGQRCTAIKRVLVHESVADELVELL 302

Query: 70  KNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAP 127
           K E+       P +   D++ +++      +  L+DD    G  +++GG R+   L I P
Sbjct: 303 KEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNL-IYP 361

Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
           TLL  V  D  +  EE FGP+LPI+ V+ IE++ ++ N     L A +FT +    ++  
Sbjct: 362 TLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLA 421

Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           + +  G + IN           PF G ++SG+G      +    + +K +
Sbjct: 422 DALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGI 470

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score = 91.3 bits (227), Expect = 9e-21
 Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 10/241 (4%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTK 59
           AA   +L  V LELGGKSP +  +  +L  A             N GQ C +       +
Sbjct: 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVE---QAHEALFFNMGQCCCAGSRTFVQE 299

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + ++      +     NP + K +    ++   F ++ +L++  K  G K+  GG+
Sbjct: 300 SIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGK 359

Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R  +K   I PT+  DV  D  I  EEIFGP+  I     I++  +  N+ T  LAA +F
Sbjct: 360 RHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVF 419

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +      F   + AG + +N     ++  + PFGG + SG G   G++    ++  K 
Sbjct: 420 TKDIDKAITFSNALRAGTVWVN-CYNVVSPQA-PFGGYKMSGNGRELGEYGLQEYTEVKT 477

Query: 237 V 237
           V
Sbjct: 478 V 478

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 90.1 bits (224), Expect = 2e-20
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 6/229 (2%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
             A + L    LELGGK+P++     +L  A    +   +  N GQ C+S + I   +  
Sbjct: 213 ERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFS-NAGQLCVSIERIYVHESV 271

Query: 62  APKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-- 118
             + +               L+   D+  +++     R++  +DD    G  V  G R  
Sbjct: 272 YDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRAR 331

Query: 119 -DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            D       PT+L  V  D  + +EE FGP++ I  V   +++ ++ N     L A ++T
Sbjct: 332 PDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWT 391

Query: 178 NNKKLKQQFVETVSAGGLVINDT-AVHLAVHSLPFGGVQESGMGAYHGK 225
            +    ++    + AG + +N+  A   A    P GG+++SG+G  HG 
Sbjct: 392 RDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGA 440

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 88.7 bits (220), Expect = 7e-20
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 14/244 (5%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVF-DSGINLKVACRRMIMGKWGC--NNGQACISPDHIIT 57
            AA  +L PV LELGGKSP +V  D+ ++  V              N GQ C +      
Sbjct: 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHF-----ALFFNQGQCCCAGSRTFV 293

Query: 58  TKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 115
            +    + +E  K         +P     +    V+   F ++   ++  K  G  ++ G
Sbjct: 294 HESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITG 353

Query: 116 GERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           G+R  +K   I PT+  DV  D  I  +EIFGP+  IL    +++     N+    LAA 
Sbjct: 354 GDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAG 413

Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           +F+ N          + AG + +N   V  A  S+PFGG + SG+G   G ++ + +   
Sbjct: 414 VFSKNIDTANTLSRALKAGTVWVNCYDVFDA--SIPFGGYKMSGIGREKGIYALNNYLQV 471

Query: 235 KAVL 238
           KAV+
Sbjct: 472 KAVV 475

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 6/216 (2%)

Query: 6   KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 65
             L  V+ E+GGK  +V D   +L +A   ++   +G + GQ C +    I  +D   ++
Sbjct: 278 IWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFS-GQKCSACSRAIVHEDVYDEV 336

Query: 66  LESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LR 124
           LE +    +     NP ++  +  ++N   F ++   ++  K  G++V GGE D +K   
Sbjct: 337 LEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYF 396

Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
           I PT+  DV   + IM EEIFGP++  +     + + +I N+    L   + +NN++  +
Sbjct: 397 IQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLE 456

Query: 185 QFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESG 218
           +       G L  N   T   +  H  PFGG   SG
Sbjct: 457 KARREFHVGNLYFNRGCTGAIVGYH--PFGGFNMSG 490

Length = 514

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 87.5 bits (217), Expect = 2e-19
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 13/235 (5%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKD 60
           A A   +   +LELGG  P +     +L  A    +  +    NNGQ+CI+    I   D
Sbjct: 219 AIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTAR--VQNNGQSCIAAKRFIVHAD 276

Query: 61  YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
                 E     +      +P     D+  +        + K +DD   +G  I+ GG+R
Sbjct: 277 VYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKR 336

Query: 119 -DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            D       PT++ D+  D  + +EE+FGP+  +  V  I+++ +I N+ T  L +  +T
Sbjct: 337 PDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWT 396

Query: 178 NNKKLKQQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMG---AYHGKFSF 228
            ++  +++F++ + AG + IN  T  +     LPFGGV+ SG G   + HG   F
Sbjct: 397 RDEAEQERFIDDLEAGQVFINGMTVSYPE---LPFGGVKRSGYGRELSAHGIREF 448

Length = 457

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 87.4 bits (217), Expect = 2e-19
 Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 6/215 (2%)

Query: 12  LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 71
           LLELGG  P++     +L+ A    + G +  N+GQ C +   I+  +  A + ++ L  
Sbjct: 225 LLELGGNDPLIVMDDADLERAATLAVAGSYA-NSGQRCTAVKRILVHESVADEFVDLLVE 283

Query: 72  ELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTL 129
           +       +P+  + D+  +++     ++   +++    G +++ G +R       APT+
Sbjct: 284 KSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALY--APTV 341

Query: 130 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 189
           L  VP D+ +++EE FGP+ P++ V  ++++  I NS    L++ + TN+    ++ VE 
Sbjct: 342 LDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVER 401

Query: 190 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
           +  G + +N+          PFGGV++SG+G   G
Sbjct: 402 LDVGTVNVNEVP-GFRSELSPFGGVKDSGLGGKEG 435

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 87.5 bits (217), Expect = 2e-19
 Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 9/216 (4%)

Query: 9   TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLES 68
           T   LE GG +PV+ D   +L      ++ G +  + GQ C+S   +    + A    + 
Sbjct: 226 TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQR 284

Query: 69  LKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIA 126
           L    E     +P     ++  ++      R+ + +++   +G +++ GG+R  +    A
Sbjct: 285 LAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTT-YA 343

Query: 127 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 186
           PT+LLD PRD+ + ++EIFGP++ + + D ++++    NS      A +FT +  +  + 
Sbjct: 344 PTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKA 403

Query: 187 VETVSAGGLVINDTAVHLA--VHSLPFGGVQESGMG 220
           V  + A  +++ND   H A  V  +PF G ++SG G
Sbjct: 404 VRRLDATAVMVND---HTAFRVDWMPFAGRRQSGYG 436

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 87.0 bits (216), Expect = 2e-19
 Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 12/247 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M AAA ++  V LELGGK+P +VF    + + A  + + G +  N GQ C +   ++  +
Sbjct: 230 MRAAAGNVKKVALELGGKNPNIVFADA-DFETAVDQALNGVF-FNAGQVCSAGSRLLVEE 287

Query: 60  DYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               K + +L    +     N L    ++  +V++ H  ++   +   K  G ++V GG+
Sbjct: 288 SIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGK 347

Query: 118 R-DKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
           R   ++L     + PT+  DV R   I+ EEIFGP+L +   D  E++  + N     LA
Sbjct: 348 RPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLA 407

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
             ++T +     +    + AG + IND   H      P+GG ++SG+G   G    + + 
Sbjct: 408 GAVWTKDIARANRVARRLRAGTVWIND--YHPYFAEAPWGGYKQSGIGRELGPTGLEEYQ 465

Query: 233 HKKAVLS 239
             K +  
Sbjct: 466 ETKHINI 472

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 85.3 bits (211), Expect = 1e-18
 Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 10/243 (4%)

Query: 2   AAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           AAA  +L  V LELGGKSP+ +FD   ++ +A    ++G +  N G+ C++   +   + 
Sbjct: 256 AAATSNLKQVSLELGGKSPLLIFDDA-DVDMAVDLALLGIF-YNKGEICVASSRVYVQEG 313

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + ++ L  + +++   +P + +      V+   F ++   ++  K  G  ++ GG+ 
Sbjct: 314 IYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKP 373

Query: 119 DKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
             +K   I PT+  DV  D  I  +EIFGP++ ++    +E++    N+    LAA + T
Sbjct: 374 CGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVT 433

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKA 236
            +  +      ++ AG + +N    + A     PFGG + SG G   G  + D +   K+
Sbjct: 434 KDLDVANTVSRSIRAGTIWVN---CYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKS 490

Query: 237 VLS 239
           V++
Sbjct: 491 VVT 493

Length = 501

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 25/233 (10%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
            A   + L  V LELGGKS  +V D   +L  A   ++      NNGQ C++   I+  +
Sbjct: 232 AAVCGERLARVTLELGGKSAAIVLDDA-DLDAAVPGLVPASLM-NNGQVCVALTRILVPR 289

Query: 60  DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +++E+L   +      +PL+ +  +  + ++    R+   +   +  G ++V GG 
Sbjct: 290 SRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGG 349

Query: 118 RDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R     R   + PTL  DV  D  I  EEIFGP+L ++  D  +D+  I N     L+  
Sbjct: 350 RPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGS 409

Query: 175 LFTNNKKLKQQFVET-------VSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
           ++T +       VE        +  G + +N   +       PFGG ++SG+G
Sbjct: 410 VWTAD-------VERGLAVARRIRTGTVGVNGFRLDFG---APFGGFKQSGIG 452

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 29/252 (11%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
             A+    VLLELGG + ++     +L +A R ++    G   GQ C +   +I  +   
Sbjct: 234 TVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESVY 292

Query: 63  PKLLESLKN-----------ELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG 110
            + LE L             +     G  PL ++  + + +N+   A+           G
Sbjct: 293 DEFLERLVKAYKQVRIGDPLDEGTLVG--PLINQAAVEKYLNAIEIAK--------SQGG 342

Query: 111 KIVHGGERDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 167
            ++ GG+R         + PT++  V  D+ I+ EE F P+L ++  D +E++  I N  
Sbjct: 343 TVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDV 402

Query: 168 TKPLAAYLFTNNKKLKQQFVE-TVSAGGLV-INDTAVHLAVHSLPFGGVQESGMGAYHGK 225
            + L++ +FT + +   +++    S  G+V +N       +    FGG +E+G G   G 
Sbjct: 403 PQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKETGGGRESGS 461

Query: 226 FSFDVFSHKKAV 237
            ++  +  +   
Sbjct: 462 DAWKQYMRRSTC 473

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 83.1 bits (206), Expect = 4e-18
 Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 19/246 (7%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
           AAA     V LELGGK P       +L  A   ++ G +  N+GQ+C S + I   +   
Sbjct: 213 AAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIY 271

Query: 63  PKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN 121
              +E+    ++ +   +PL+    L  +V++     +   + D    G           
Sbjct: 272 DAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFP 331

Query: 122 KLR-----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           + +     +APT+L +V     +M EE FGP++ I+ V    ++  ++N     L A ++
Sbjct: 332 EDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVW 391

Query: 177 TNNKKLKQQFVETVSAGGLVIN-----DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           T +    +   E +  G + +N     D A       L + GV++SG G    +  +D  
Sbjct: 392 TKDIARAEALGEQLETGTVFMNRCDYLDPA-------LAWTGVKDSGRGVTLSRLGYDQL 444

Query: 232 SHKKAV 237
           +  K+ 
Sbjct: 445 TRPKSY 450

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 79.5 bits (197), Expect = 8e-17
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 24/252 (9%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCN---NGQACISPDHII 56
           MAAAA  L  V +ELGGKSP +VFD   +L  A    ++     N   +GQ C +   + 
Sbjct: 237 MAAAAASLKEVTMELGGKSPLIVFDDA-DLDRAADIAMLA----NFYSSGQVCTNGTRVF 291

Query: 57  TTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 114
             K         L   +E     +P+  + +   +V+  H  ++   ++  K  G +++ 
Sbjct: 292 VQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLC 351

Query: 115 GGERDKNKLR-----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
           GGER           +APT+  D   D  I+ EEIFGP++ +LT D  ++     N    
Sbjct: 352 GGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEY 411

Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVIN---DTAVHLAVHSLPFGGVQESGMGAYHGKF 226
            LAA +FT +     + +  + AG   IN   ++        +P GG ++SG+G  +G  
Sbjct: 412 GLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPA-----EMPVGGYKQSGIGRENGIA 466

Query: 227 SFDVFSHKKAVL 238
           + + ++  K+V 
Sbjct: 467 TLEHYTQIKSVQ 478

Length = 488

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 77.4 bits (191), Expect = 4e-16
 Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 11/228 (4%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           A   K L+   LELGGKSP +VFD   +L  A   ++   W  N GQ C +   ++  + 
Sbjct: 246 AGTGKKLS---LELGGKSPFIVFDDA-DLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQES 300

Query: 61  YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGE 117
            A +L+  LK  + +    +PL+ + D+  IV+     R+ +L+++ +  G  V   G +
Sbjct: 301 VAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGAD 360

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                    PTL  +VP  S I  EEIFGP+L +LT    +++  + N+    LAA +++
Sbjct: 361 LPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWS 420

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 225
            N  L  +   ++ AG + IN   +  A  +  FGG +ESG G   GK
Sbjct: 421 ENLSLALEVALSLKAGVVWINGHNLFDA--AAGFGGYRESGFGREGGK 466

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 77.3 bits (190), Expect = 5e-16
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 8/233 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M   AK +  V LELGG +P +VFD   +L  A    +  K+  N GQ C+  + +    
Sbjct: 242 MEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQD 299

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +  E L+  +   +  + LE    +  +++    A++ + + D    G ++V GG+
Sbjct: 300 GVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 359

Query: 118 RDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             +       PT+L+DVP ++ +  EE FGPL P+       D     N     LAAY +
Sbjct: 360 AHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFY 419

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 229
             +     +  E +  G + IN   +   V   PFGG++ SG+G    K+  +
Sbjct: 420 ARDLSRVFRVGEALEYGIVGINTGIISNEV--APFGGIKASGLGREGSKYGIE 470

Length = 482

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 76.8 bits (189), Expect = 7e-16
 Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 24/249 (9%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  +L  V LELGGKSP++  +  ++  A R M M     N G+ CI+   +   +  
Sbjct: 245 SCAVSNLKKVSLELGGKSPLIIFADCDMDKAVR-MGMSSVFFNKGENCIAAGRLFVEESI 303

Query: 62  APKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVS----GKIVHGG 116
             + +  +  E++     +PL+ S D       NH A L KL++  +        +V+GG
Sbjct: 304 HDEFVRRVVEEVKKMKIGDPLDRSTDHG---PQNHKAHLDKLVEYCERGVKEGATLVYGG 360

Query: 117 ER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAA 173
           ++ D+      PT+  DV     I  EE FGP++ I   D   ++      N     LA+
Sbjct: 361 KQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLAS 420

Query: 174 YLFTNNKKLKQQFVETVSAGGLVIN-----DTAVHLAVHSLPFGGVQESGMGAYHGKFSF 228
            +FT +        + + AG + +N     D A        PFGG ++SG G   G+ + 
Sbjct: 421 GVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAA-------PFGGFKQSGFGKDLGEEAL 473

Query: 229 DVFSHKKAV 237
           + +   K V
Sbjct: 474 NEYLKTKTV 482

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 76.2 bits (188), Expect = 9e-16
 Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 15/246 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVF-DSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 58
           MAAAA  L  + LELGGK+P +VF D+ ++  +     +        GQ C++   ++  
Sbjct: 214 MAAAAPTLKRLGLELGGKTPCIVFDDADLDAALP---KLERALTIFAGQFCMAGSRVLVQ 270

Query: 59  KDYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
           +  A ++ + L   L     G     + D+  +++  +  R+ ++++    +G ++V  G
Sbjct: 271 RSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRG 330

Query: 117 ERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
                 L     + PTLL     D+ I+ EEIFGP+L + T D   ++  + N     LA
Sbjct: 331 GPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLA 390

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVF 231
           A ++T +     +    + AG + IND      + +    GG ++SG+G  HG  + + F
Sbjct: 391 ASVWTRDLARAMRVARAIRAGTVWIND---WNKLFAEAEEGGYRQSGLGRLHGVAALEDF 447

Query: 232 SHKKAV 237
              K +
Sbjct: 448 IEYKHI 453

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 75.6 bits (187), Expect = 2e-15
 Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 15/248 (6%)

Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
           AA +   V    G K+  V     +L+     ++   +G   GQ C++    +   D A 
Sbjct: 234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAA-GQRCMALSVAVAVGDEAD 292

Query: 64  KLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD-- 119
           + +  L    +        +   D+  +++     R+  L++     G K+V  G R   
Sbjct: 293 EWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDG-RGVK 351

Query: 120 ----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
               +N   + PT+L +V  D  I  EEIFGP+L I+ VD ++++  IIN+      A +
Sbjct: 352 VPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAI 411

Query: 176 FTNNKKLKQQFVETVSAGGLVIN-DTAVHLAVHSLPFGGVQESGMGAYH--GKFSFDVFS 232
           FT +    ++F   V AG + IN    V LA  S  FGG + S  G  H  GK     ++
Sbjct: 412 FTRSGAAARKFQREVDAGMVGINVPIPVPLAFFS--FGGWKGSFFGDLHFYGKDGVRFYT 469

Query: 233 HKKAVLSR 240
             K V SR
Sbjct: 470 QTKTVTSR 477

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 18/234 (7%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTK 59
             A + L    LELGGK+P++     +L  A    +     C  N GQ CIS + I   +
Sbjct: 249 EQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRA---CFSNAGQLCISIERIYVHE 305

Query: 60  DYAPKLLESLKNELENF-----YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIV 113
               + + +    +        Y  +     D+  +++      +S  +DD    G  ++
Sbjct: 306 SIYDEFVRAFVAAVRAMRLGAGYDYSA----DMGSLISEAQLETVSAHVDDAVAKGATVL 361

Query: 114 HGGER--DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
            GG+   D   L   PT+L  V  D  +  EE FGP++ +  V  ++++ +  N     L
Sbjct: 362 AGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGL 421

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDT-AVHLAVHSLPFGGVQESGMGAYHG 224
            A ++T +    +     + AG + +N+  A        P GG+++SG+G  HG
Sbjct: 422 NASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHG 475

Length = 524

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 11/226 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           ++AAA  +    LELGGK+PV VFD   +L      +    +  N GQ C +   I   +
Sbjct: 233 LSAAADSVKRTHLELGGKAPVIVFDDA-DLDAVVEGIRTFGY-YNAGQDCTAACRIYAQR 290

Query: 60  DYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGG 116
                L+  L   +     G    E  +L  ++++ H  R++  ++  K  G  ++V GG
Sbjct: 291 GIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGG 350

Query: 117 ER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
           E  D       PTLL    +D  I+  E+FGP++ +   D  + +    N     LA+ +
Sbjct: 351 EAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSV 410

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHL-AVHSLPFGGVQESGMG 220
           +T +     +    +  G   +N    H   V  +P GG ++SG G
Sbjct: 411 WTRDVGRAHRVSARLQYGCTWVNT---HFMLVSEMPHGGQKQSGYG 453

Length = 475

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 74.8 bits (184), Expect = 3e-15
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 10/243 (4%)

Query: 2   AAAAKHLTPVLLELGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
            AA  +L PV LELGGKSP +   D+ ++  V      +     N GQ C +       +
Sbjct: 293 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF---FNQGQCCCAGSRTFVHE 349

Query: 60  DYAPKLLESLK-NELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + +E  K   L+   G    +  +    ++S  F ++ + +     SG  +  GG+
Sbjct: 350 RVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGD 409

Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R  +K   I PT+  +V  D LI  +EIFGP+  IL    +++     N+    LAA +F
Sbjct: 410 RFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVF 469

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T N          +  G + +N   V  A  ++PFGG + SG+G   G +S + +   KA
Sbjct: 470 TQNLDTANTLSRALRVGTVWVNCFDVFDA--AIPFGGYKMSGIGREKGIYSLNNYLQVKA 527

Query: 237 VLS 239
           V++
Sbjct: 528 VVT 530

Length = 538

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
           AA       +LELGG  P++     +L  A    + G +  N+GQ C +   ++  +  A
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYK-NSGQRCTAVKRMLVQESVA 293

Query: 63  PKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 120
            +  E L  +   +   +P+  S D+  +++          +++    G +++ G  RD 
Sbjct: 294 DRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDG 353

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                APT+L  V     ++ EE FGP+ P++    I+D+  I NS    L++ + TN  
Sbjct: 354 ALY--APTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRL 411

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
               +F+  +  G + + +   +  +   PFGG+++SG+G   G
Sbjct: 412 DYITRFIAELQVGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEG 454

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 71.9 bits (176), Expect = 3e-14
 Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 3   AAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           A   ++  V LE GGKS  +VF    +L+ A      G +  N GQ CI+   ++  +  
Sbjct: 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESI 314

Query: 62  APKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           A + L  LK + +N+   +PL+ +  +  +++  H   +   + + +  G+++  G    
Sbjct: 315 ADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAG 374

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               I PT+ +DV  ++ +  EEIFGP+L +      E +  + N     L A ++T + 
Sbjct: 375 LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDL 434

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
               +    + AG + +N+   +    ++PFGG ++SG G      + + F+  K +
Sbjct: 435 SRAHRMSRRLKAGSVFVNN--YNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489

Length = 494

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 71.0 bits (174), Expect = 6e-14
 Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 30/251 (11%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           A A   L   +LELGG  P +  +  +L++A +  + G++  N GQ C +    I  +  
Sbjct: 222 AQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQVCAAAKRFIIEEGI 280

Query: 62  APKLLE-------SLK----NELENFYGKNPLESKDLSRIVNSNHFARLSK----LLDDD 106
           A    E       +LK     + EN  G  P+   DL   ++    A L++    LL  +
Sbjct: 281 ASAFTERFVAAAAALKMGDPRDEENALG--PMARFDLRDELHHQVEATLAEGARLLLGGE 338

Query: 107 KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 166
           K++G   +           APT+L +V  +     EE+FGP+  I      E + ++ N 
Sbjct: 339 KIAGAGNY----------YAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELAND 388

Query: 167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKF 226
               L+A +FT ++   +Q    +  GG+ IN      A   + FGGV++SG G     F
Sbjct: 389 SEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDA--RVAFGGVKKSGFGRELSHF 446

Query: 227 SFDVFSHKKAV 237
               F + + V
Sbjct: 447 GLHEFCNIQTV 457

Length = 462

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 71.2 bits (174), Expect = 6e-14
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 11/214 (5%)

Query: 13  LELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 71
           +ELGGK+PV VFD      V       G +  N GQ C +   I   +     L+E L  
Sbjct: 244 MELGGKAPVIVFDDADIDAVVEGVRTFGFY--NAGQDCTAACRIYAQRGIYDTLVEKLGA 301

Query: 72  ELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAP 127
            +       P  ES +L  + +  H  R+ K +++ K  G  K++ GGE+ K      AP
Sbjct: 302 AVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAP 361

Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
           TLL    +D  I+ +E+FGP++ I + D  E   +  N     LA+ ++T +     +  
Sbjct: 362 TLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLS 421

Query: 188 ETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMG 220
             +  G   +N    H + V  +P GG + SG G
Sbjct: 422 ARLQYGCTWVN---THFMLVSEMPHGGQKLSGYG 452

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 18/251 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDH 54
           M  A++++ PV LELGGKSP + F   ++        A    +M  +  N G+ C  P  
Sbjct: 231 MQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVM--FALNQGEVCTCPSR 288

Query: 55  IITTKDYAPKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KI 112
            +  +    + +E     ++     NPL+++  +    +     ++   +D  K  G ++
Sbjct: 289 ALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEV 348

Query: 113 VHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 167
           + GGER             PT          I  EEIFGP+L + T    E++ +I N  
Sbjct: 349 LTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDT 407

Query: 168 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFS 227
              L A ++T +     +    + AG +  N    HL      FGG ++SG+G  + K  
Sbjct: 408 LYGLGAGVWTRDGNTAYRMGRGIQAGRVWTN--CYHLYPAHAAFGGYKQSGIGRENHKMM 465

Query: 228 FDVFSHKKAVL 238
            D +   K +L
Sbjct: 466 LDHYQQTKNLL 476

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 18/247 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MA AA  L  V LELGGKS  +     +L  AC  M       + GQ C      ITT+ 
Sbjct: 238 MADAAATLKKVFLELGGKSAFIVLDDADLAAAC-SMAAFTVCMHAGQGC-----AITTRL 291

Query: 61  YAPK-----LLESLKNELENFYGKNPLESKDL-SRIVNSNHFARLSKLLD-DDKVSGKIV 113
             P+      + +    + +    +P +   +   ++++    R+   LD      G+  
Sbjct: 292 VVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFA 351

Query: 114 HGGERDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 170
            GG R  ++ R   + PT++  +  ++ +  EEIFGP+L ++  D  +D+  I N     
Sbjct: 352 CGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYG 411

Query: 171 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 230
           L+  +F  + +        V  G + +N    + A    PFGG ++SG+G   G   F+ 
Sbjct: 412 LSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSA--DAPFGGYKQSGIGREMGVAGFEE 469

Query: 231 FSHKKAV 237
           +   K +
Sbjct: 470 YLETKLI 476

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 67.8 bits (166), Expect = 8e-13
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 13/246 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAA  + PV  ELGGK+  +  +  +   A   ++   +  N GQ C+  + +   + 
Sbjct: 236 MKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERP 294

Query: 61  YAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH----- 114
              + + +LK   E+   G     + ++  ++++ H  ++          G  V      
Sbjct: 295 IFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGV 354

Query: 115 ---GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
              G         + PT+   +P  + +++EEIFGP   I   D  E+   + N     L
Sbjct: 355 PDFGDALA-GGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGL 413

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           AA ++T +     +    +  G + +N  +  L     PFGG + SG+G   G  S + +
Sbjct: 414 AASVWTEDLSRAHRVARQMEVGIVWVN--SWFLRDLRTPFGGSKLSGIGREGGVHSLEFY 471

Query: 232 SHKKAV 237
           +    V
Sbjct: 472 TELTNV 477

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 63.3 bits (154), Expect = 3e-11
 Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 19/219 (8%)

Query: 14  ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 73
           E GGK   V     +++      I G +    GQ C +   +       P+    L  EL
Sbjct: 283 ETGGKDFHVVHPSADVEHVVSGTIRGAFEYQ-GQKCSACSRLYVPHSLWPRFKGRLLAEL 341

Query: 74  ENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG---KIVHGGERDKNK-LRIAPT 128
                G        +  +++   FA++ K ++  K       I+ GG+ D +    + PT
Sbjct: 342 SRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPT 401

Query: 129 LLL-DVPRDSLIMSEEIFGPLLPILTV-----DKIEDSFDIINSGTK-PLAAYLFTNNKK 181
           ++    P++ L M EEIFG   P+LTV     DK ++  D+++S T   L   +F  ++ 
Sbjct: 402 VVESKDPQEPL-MKEEIFG---PVLTVYVYPDDKYKEILDLVDSTTSYGLTGAVFAKDRD 457

Query: 182 LKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESG 218
              +  + +  +AG   IND      V   PFGG + SG
Sbjct: 458 AILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 7e-10
 Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 3/214 (1%)

Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 67
           + P+ +ELGGK   +     +L +A   +I G +   +GQ C +   ++  +  A  L+E
Sbjct: 258 MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFS-YSGQRCTAVKVVLVMESVADALVE 316

Query: 68  SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
            +  ++       P +  D++ +V+ +    +  L+ D K  G       + +  L I P
Sbjct: 317 KVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWP 375

Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
            LL +V  D  I  EE FGP+LP++ ++ +E+     N+    L   +FT +        
Sbjct: 376 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 435

Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 221
           + +  G + IN        H  PF G+++SG+G+
Sbjct: 436 DAMETGTVQINSAPARGPDH-FPFQGLKDSGIGS 468

Length = 496

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 58.7 bits (142), Expect = 8e-10
 Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 17/207 (8%)

Query: 46  GQACISPDHII---TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 102
           GQ C++    +      ++ P++ E  + ++    G +P    ++  ++      R++ L
Sbjct: 275 GQRCMAISAAVLVGAADEWVPEIRERAE-KIRIGPGDDP--GAEMGPLITPQAKDRVASL 331

Query: 103 LDDDKVSG-KIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 156
           +      G +++  G   K         + PTLL  VP       EEIFGP+L +L  D 
Sbjct: 332 IAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADT 391

Query: 157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DTAVHLAVHSLPFGGVQ 215
           +E++  +IN+        +FT +    ++F   +  G + +N    V L   S  F G +
Sbjct: 392 LEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFS--FTGWK 449

Query: 216 ESGMGAYH--GKFSFDVFSHKKAVLSR 240
           +S  G +H  GK     ++  K V +R
Sbjct: 450 DSFFGDHHIYGKQGTHFYTRGKTVTTR 476

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 27/220 (12%)

Query: 13  LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-----PKLLE 67
           LE+GG +P+V     ++  A   ++   +    GQ C     +I            +L+E
Sbjct: 205 LEMGGNNPLVVWDVADIDAAAYLIVQSAF-LTAGQRCTCARRLIVPDGAVGDAFLERLVE 263

Query: 68  SLKN-------ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER- 118
           + K            F G  PL        + +   AR      D     G+ +   ER 
Sbjct: 264 AAKRLRIGAPDAEPPFMG--PL--------IIAAAAARYLLAQQDLLALGGEPLLAMERL 313

Query: 119 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
                 ++P ++ DV   + +  EEIFGPLL +   D  +++  + N+    L+A L ++
Sbjct: 314 VAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSD 372

Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 218
           ++ L ++F+  + AG +  N      A  + PFGGV  SG
Sbjct: 373 DEALFERFLARIRAGIVNWNRPTTG-ASSTAPFGGVGLSG 411

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 11/166 (6%)

Query: 63  PKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERD 119
           P++ E L  EL+     +P + S  +  +++   F R+   +D  K     +I+ GG+ D
Sbjct: 332 PEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD 391

Query: 120 KNK-LRIAPTLLL-DVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTK-PLAAY 174
            +    + PT++    P+   +M+EEIFGP+L +        E++ +++++ +   L   
Sbjct: 392 DSVGYFVEPTVIETTDPKHK-LMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGA 450

Query: 175 LFTNNKKLKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESG 218
           +F  ++K  ++  + +  +AG   IND      V   PFGG + SG
Sbjct: 451 IFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 15/185 (8%)

Query: 3   AAAKHLTPVLLELGGK-SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           A A      LLELGG  + +V +   +L +A R ++    G   GQ C +   +I  +  
Sbjct: 233 AVAARFGRSLLELGGNNAIIVMEDA-DLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESI 290

Query: 62  APKLLESLKNELENFYGK----NPLESKDL-SRIVNSNHFARLSKLLDDDKVS-GKIVHG 115
             ++LE LK      Y +    +PL+   L   +            +++ K   G ++ G
Sbjct: 291 YDEVLERLKK----AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFG 346

Query: 116 GER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           G+  D     + PT++ +   D+ I+ EE F P+L +L  D +E++    N   + L++ 
Sbjct: 347 GKVIDGPGNYVEPTIV-EGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSS 405

Query: 175 LFTNN 179
           +FT +
Sbjct: 406 IFTTD 410

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 51.7 bits (123), Expect = 2e-07
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)

Query: 46  GQACISPDHII---TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 102
           GQ C++   ++     K +  KL+E  K  L+   G  P    DL  +++     R+ +L
Sbjct: 388 GQRCMALSTVVFVGDAKSWEDKLVERAK-ALKVTCGSEP--DADLGPVISKQAKERICRL 444

Query: 103 LD---DDK----VSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 153
           +    DD     + G+  +V G E+      I PT+L  V  D     EEIFGP+L  + 
Sbjct: 445 IQSGVDDGAKLLLDGRDIVVPGYEKGN---FIGPTILSGVTPDMECYKEEIFGPVLVCMQ 501

Query: 154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 213
            +  +++  IIN       A +FT++    ++F   + AG + IN   + + +    F G
Sbjct: 502 ANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGIN-VPIPVPLPFFSFTG 560

Query: 214 VQESGMG--AYHGKFSFDVFSHKKAV 237
            + S  G   ++GK   D F+  K V
Sbjct: 561 NKASFAGDLNFYGKAGVDFFTQIKLV 586

Length = 604

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 11/227 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +A       P++ E GG++ ++ DS    +     ++   +  + GQ C +   +   +D
Sbjct: 335 LAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFD-SAGQRCSALRVLCLQED 393

Query: 61  YAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
            A ++L  LK  +      NP   + D+  ++++   A + K +   +  G++VH     
Sbjct: 394 VADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAP 453

Query: 120 KNKLR---IAPTLL-LDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAA 173
            +  +   +APTL+ L+   +   +  E+FGP+L ++    D++++  D IN+    L  
Sbjct: 454 NSLQKGTFVAPTLIELENLDE---LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTL 510

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
            + T   +      E   AG L +N   V   V   PFGG   SG G
Sbjct: 511 GVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557

Length = 769

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 54/231 (23%), Positives = 111/231 (48%), Gaps = 14/231 (6%)

Query: 12  LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 71
           LLEL G + ++     ++++A R ++    G   GQ C +   ++  +     +LE L  
Sbjct: 264 LLELSGNNAIIVMDDADIQLAVRSVLFAAVG-TAGQRCTTCRRLLLHESIYDDVLEQLLT 322

Query: 72  ELENFYGKNPLESKDLSRIVNSNH----FARLSKLLDDDKVSGKIVHGG---ERDKNKLR 124
             +     +PLE   L   +++      F +  +++      GKI+ GG   E + N   
Sbjct: 323 VYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQ--GGKILTGGSAIESEGN--F 378

Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
           + PT++ ++  D+ ++ EE+FGP+L ++    +E++ +I NS  + L++ +FT N +   
Sbjct: 379 VQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIF 437

Query: 185 QFV-ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           +++    S  G+V  +   + A     FGG + +G G   G  S+  +  +
Sbjct: 438 KWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488

Length = 508

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 3/145 (2%)

Query: 46  GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 104
           GQ C +   +I  K     +L++L+  L      +P  E  D+  +V+    A +   + 
Sbjct: 289 GQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVA 348

Query: 105 DDKVSG-KIVHGGERDKNKLRIAPTLLL-DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 162
               +G ++  GG    +     PTLLL + P    + + E FGP+          ++  
Sbjct: 349 ALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAAR 408

Query: 163 IINSGTKPLAAYLFTNNKKLKQQFV 187
           +   G   L A L T++ +  +QF+
Sbjct: 409 LAARGGGSLVATLATSDPEEARQFI 433

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 3/90 (3%)

Query: 130 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 189
           ++DV   + +  EE FGPLL ++  D  +++  I N+    L+A L +++++L  +F+  
Sbjct: 360 IIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLE 419

Query: 190 VSAGGLVIN-DTAVHLAVHSLPFGGVQESG 218
           + AG  ++N +  +  A  + PFGG+  SG
Sbjct: 420 IRAG--IVNWNKPLTGASSAAPFGGIGASG 447

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 10  PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL 69
           P++ E GG++ ++ DS    +   R ++   +  + GQ C +   +   +D A ++L  +
Sbjct: 268 PLIAETGGQNAMIVDSTALPEQVVRDVLRSAFD-SAGQRCSALRVLCVQEDVADRVLTMI 326

Query: 70  KNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---- 124
           +  ++      P L + D+  ++++     L   ++    + K +     D ++      
Sbjct: 327 QGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386

Query: 125 -IAPTLL-LDVPRDSLIMSEEIFGPLLPIL--TVDKIEDSFDIINSGTKPLAAYLFTNNK 180
            +APTL  LD   D   +SEE+FGP+L ++     +++   D IN     L   + +  +
Sbjct: 387 FVAPTLFELD---DIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIE 443

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
              +   +    G   +N   V   V   PFGG   SG G   G
Sbjct: 444 TTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)

Query: 142 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DT 200
           EE FGPLL ++  D  +++  + N+    L+A L +++++   QF+  + AG  ++N + 
Sbjct: 374 EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAG--IVNWNK 431

Query: 201 AVHLAVHSLPFGGVQESG 218
            +  A  + PFGGV  SG
Sbjct: 432 PLTGASSAAPFGGVGASG 449

Length = 487

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 48/224 (21%), Positives = 98/224 (43%), Gaps = 7/224 (3%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           A     + P++ E GGK+ ++ DS    + A + ++   +G + GQ C +   +   ++ 
Sbjct: 267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFG-SAGQRCSALRLLYLQEEI 325

Query: 62  APKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           A + +E LK  + +    +P +   D+  +++      L    +  +    ++     D 
Sbjct: 326 AERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDD 385

Query: 121 NKLRI-APTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFT 177
                 AP ++  V    L  + E+FGP+L ++      ++++ + IN+    L   + +
Sbjct: 386 GNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHS 443

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 221
            +++  + + E V AG L IN       V   PFGG   SG G 
Sbjct: 444 RDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP 487

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.75
KOG2449	157	consensus Methylmalonate semialdehyde dehydrogenas	99.58
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.49
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	99.47
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.31
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	97.76
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	87.7
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	86.33

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=1e-66  Score=493.09  Aligned_cols=277  Identities=72%  Similarity=1.176  Sum_probs=256.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhccc-CCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++++||++||||||||+||++|||++.|++.+++++| . |+||.|++++|||||++++|+|+++|++++++++.|+
T Consensus       206 ~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f-~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  284 (484)
T PLN02174        206 AAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKW-GCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKN  284 (484)
T ss_pred             HHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHh-hCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCC
Confidence            5688999999999999999999999999999999999998 7 9999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           81 PLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        81 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                      |.+++++||++++.+++++.++|+++.+++++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus       285 p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ea  364 (484)
T PLN02174        285 PMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES  364 (484)
T ss_pred             CcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHH
Confidence            97788999999999999999999998778899999976556899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+++|+++|||++||||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus       365 i~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  444 (484)
T PLN02174        365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR  444 (484)
T ss_pred             HHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence            99999999999999999999999999999999999999987655557899999999999999999999999999999988


Q ss_pred             CCCCCCCCcCCCCchhHHHHHHHHHhhhhHHHHHHHhhc
Q 023415          241 GFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW  279 (282)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (282)
                      ......+++||||+.++.++++.+++..+.++.+.+.+|
T Consensus       445 ~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (484)
T PLN02174        445 SLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGL  483 (484)
T ss_pred             CccCcccccCCCCChHHHHHHHHHHhhchhhhhhccccC
Confidence            765677899999999999999999885455555444443

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=7.3e-66  Score=456.79  Aligned_cols=276  Identities=55%  Similarity=0.964  Sum_probs=262.2

Q ss_pred             ChhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         1 ~~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      |.+||+|++||+||||||||++|++|+|++.++++|+|+++ +|+||.|+|+++|+++.+++.+++++++..++++++.+
T Consensus       197 m~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~-~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n  275 (477)
T KOG2456|consen  197 MAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW-MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGEN  275 (477)
T ss_pred             HHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh-ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           81 PLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        81 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                      +.++.|++.+||+.|++|+.+++++   .++++.||..+++..|++|||+.|+++++++|+||+|||||+|+.|++++|+
T Consensus       276 ~~eS~d~sRiIn~~hf~Rl~~ll~~---~~kv~~Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Ea  352 (477)
T KOG2456|consen  276 PKESKDLSRIINQRHFQRLSALLDE---TGKVAIGGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEA  352 (477)
T ss_pred             ccccccHHHHhhHHHHHHHHHHhcC---CCceecCCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHH
Confidence            9999999999999999999999863   2899999999888899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+.+|+.+.+|++|+||+|...+.++..++.+|.|.+|+...|.....+||||+|.||+|+|||+++++.|++.|++..+
T Consensus       353 i~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r  432 (477)
T KOG2456|consen  353 INFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR  432 (477)
T ss_pred             HHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC--CCcCCCCchhHHHHHHHHHhhhhHHHHHHHhhcc
Q 023415          241 GFIGDV--PVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS  280 (282)
Q Consensus       241 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (282)
                      +++.+.  ..|||||+.++..+++.+++......+...+|+.
T Consensus       433 s~~~d~~~~~RYPP~S~~K~~~lr~~~~~~~~~~i~~~~~~~  474 (477)
T KOG2456|consen  433 SLGGDKLLALRYPPYSPQKLTLLRFLLESRLFQAILLSAGLL  474 (477)
T ss_pred             ccccchhhhhcCCCCChHHHHHHHHHHHhHHHHHHHHhheeE
Confidence            887665  7899999999999999999988766666555543

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=4.2e-63  Score=471.19  Aligned_cols=263  Identities=48%  Similarity=0.819  Sum_probs=246.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|++.+++++.+++
T Consensus       203 ~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~-~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~  281 (493)
T PTZ00381        203 QAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF-LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDP  281 (493)
T ss_pred             HHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCC
Confidence            5688999999999999999999999999999999999999 999999999999999999999999999999999886666


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      .+++++||++++.+++++.++++  .+++++++||..+..++|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus       282 ~~~~~~gpli~~~~~~ri~~~i~--~~ga~~~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi  359 (493)
T PTZ00381        282 KKSEDYSRIVNEFHTKRLAELIK--DHGGKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVL  359 (493)
T ss_pred             ccCCCcCCCCCHHHHHHHHHHHH--hCCCcEEECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHH
Confidence            77899999999999999999997  3588999999876668899999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|+++|||++||||+|.+.+++++.++++|.|+||+...+...+.+||||+|.||+|++||.+++++||+.|+|+.+.
T Consensus       360 ~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        360 EFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             HHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence            99999999999999999999999999999999999999877766789999999999999999999999999999999886


Q ss_pred             --CCCCCCCcCCCCchhHHHHHHHHHhh
Q 023415          242 --FIGDVPVRYPPYTKGKLRLLKVLISG  267 (282)
Q Consensus       242 --~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (282)
                        ...+.+++||||+.++.++++.+++.
T Consensus       440 ~~~~~~~~~~~pp~~~~~~~~~~~~~~~  467 (493)
T PTZ00381        440 TGNSFDLSLRYPPYTSFKSWVLSFLLKL  467 (493)
T ss_pred             ccccCcccccCCCCChHHHHHHHHHHhc
Confidence              33456789999999999999988884

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=1e-62  Score=467.02  Aligned_cols=271  Identities=54%  Similarity=0.902  Sum_probs=252.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcC---CCCHHHHHHHHHHHhccc-CCCCccccCCeEEEeCCcHHHHHHHHHHHHhhcc
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDS---GINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENFY   77 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~---dADl~~aa~~i~~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~   77 (282)
                      ++|++++||+++|||||||+||++   |||++.|++.+++++| . |+||.|++++|+|||++++|+|+++|++++++++
T Consensus       202 ~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f-~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~  280 (484)
T PLN02203        202 TAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKW-GSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFF  280 (484)
T ss_pred             HHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhc-ccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhc
Confidence            567889999999999999999997   6999999999999999 8 7999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           78 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        78 ~g~~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      .|+|.+.+++||++++.+++++++++++++..+++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       281 ~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~  360 (484)
T PLN02203        281 GENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKI  360 (484)
T ss_pred             CCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCH
Confidence            99997677999999999999999999999877899999876556899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++.++++++++|.|+||+...+...+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus       361 ~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v  440 (484)
T PLN02203        361 EDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAV  440 (484)
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEE
Confidence            99999999999999999999999999999999999999999986655567899999999999999999999999999999


Q ss_pred             eEeCCCCCCCCcCCCCchhHHHHHHHHHhhhhHHHH
Q 023415          238 LSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGII  273 (282)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (282)
                      +.++.....+++||||+.++.++++.++++-|...+
T Consensus       441 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  476 (484)
T PLN02203        441 LRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLL  476 (484)
T ss_pred             EEcCccCcccccCCCCChHHHHHHHHHHhhcchhhh
Confidence            988766678899999999999999999994333333

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=1.4e-59  Score=446.43  Aligned_cols=235  Identities=24%  Similarity=0.429  Sum_probs=222.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       243 ~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f-~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p  321 (482)
T PRK11241        243 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDG  321 (482)
T ss_pred             HHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCC
Confidence            5688999999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||++++.++++++++|+++. +|+++++||..++ .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       322 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~  401 (482)
T PRK11241        322 LEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEA  401 (482)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHH
Confidence            5 6889999999999999999999996 5789999997543 58999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus       402 eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~  479 (482)
T PRK11241        402 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC  479 (482)
T ss_pred             HHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhcceEEE
Confidence            99999999999999999999999999999999999999998754  3457899999999999999999999999999986


Q ss_pred             E
Q 023415          239 S  239 (282)
Q Consensus       239 ~  239 (282)
                      +
T Consensus       480 ~  480 (482)
T PRK11241        480 I  480 (482)
T ss_pred             E
Confidence            5

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=3.3e-59  Score=441.44  Aligned_cols=237  Identities=31%  Similarity=0.510  Sum_probs=223.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh-ccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~   80 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| +|+||.|++++|+|||+++||+|+++|.++ ++ +++||
T Consensus       230 ~~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f-~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd  307 (472)
T COG1012         230 AAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAF-FNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGD  307 (472)
T ss_pred             HHHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHH-hCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCC
Confidence            5678999999999999999999999999999999999999 999999999999999999999999999999 66 78998


Q ss_pred             -CCCCCcccccCCHHHHHHHHHHHHHHHh-cCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           81 -PLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        81 -~~~~~~~gpli~~~~~~~i~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                       .++.+++||++++.++++++++|++++. |+.++.||.... |+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       308 ~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~d  386 (472)
T COG1012         308 PLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEE  386 (472)
T ss_pred             CCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHH
Confidence             5689999999999999999999999974 678888887444 8999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|..++.+++.++++|+|+||+...+...+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       387 EAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~  466 (472)
T COG1012         387 EAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVT  466 (472)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEE
Confidence            99999999999999999999999999999999999999999865456688999999999999999999999999999998


Q ss_pred             EeC
Q 023415          239 SRG  241 (282)
Q Consensus       239 ~~~  241 (282)
                      .+.
T Consensus       467 ~~~  469 (472)
T COG1012         467 IKL  469 (472)
T ss_pred             Eec
Confidence            764

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=5.7e-59  Score=438.26  Aligned_cols=254  Identities=53%  Similarity=0.937  Sum_probs=236.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|
T Consensus       194 ~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p  272 (449)
T cd07136         194 EAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDP  272 (449)
T ss_pred             HHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHH-cccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4677899999999999999999999999999999999999 999999999999999999999999999999999999988


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      .+.+++||++++.+++++++++++    +++++||..+..|+|++|||+.+++++|.+++||+||||++|++|+|++|||
T Consensus       273 ~~~~~~gpli~~~~~~~i~~~i~~----a~~~~gG~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai  348 (449)
T cd07136         273 LESPDYGRIINEKHFDRLAGLLDN----GKIVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAI  348 (449)
T ss_pred             CCCCCccCcCCHHHHHHHHHHHhc----ceEEECCCcCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHH
Confidence            778899999999999999999975    3899999765568999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|+++|||+++|||+|.+.+.+++.++++|.|+||+...+...+.+||||+|.||+|+++|.+++++||+.|+|++..
T Consensus       349 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~  428 (449)
T cd07136         349 EIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKS  428 (449)
T ss_pred             HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcC
Confidence            99999999999999999999999999999999999998765545578999999999999999999999999999999875


Q ss_pred             CCCCCCCcCCCCchhHHHH
Q 023415          242 FIGDVPVRYPPYTKGKLRL  260 (282)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~  260 (282)
                      .+.+.+++|||++.++.++
T Consensus       429 ~~~~~~~~~~~~~~~~~~~  447 (449)
T cd07136         429 TWFDLPLRYPPYKGKKKKL  447 (449)
T ss_pred             CcCCccccCCCCchHHHhh
Confidence            4456788999998766653

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.7e-59  Score=427.82  Aligned_cols=237  Identities=27%  Similarity=0.475  Sum_probs=224.6

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh-ccCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGK   79 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g   79 (282)
                      +++| .++||++||||||+|.||++|||+|.|++.++.+.| +|+||.|.+.+|+|||+++||+|+++++++..+ +.+|
T Consensus       255 ~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF-~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvG  333 (501)
T KOG2450|consen  255 EAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIF-FNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVG  333 (501)
T ss_pred             hhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhh-cccccccccCceeEEechHHHHHHHHHHHHHhcccccC
Confidence            3444 579999999999999999999999999999999999 999999999999999999999999999999966 8999


Q ss_pred             CCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           80 NPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      ||. +.+..||.+++.|++|+.++|+.++ +|+++++||.+ .+.|+|++|||+.++.++|.|++||+||||+.|++|++
T Consensus       334 dP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t  413 (501)
T KOG2450|consen  334 DPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKT  413 (501)
T ss_pred             CCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCc
Confidence            885 6899999999999999999999996 68899999976 35799999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      .||+|+++|++.|||+++|||+|.+++.+++.++++|+||||+...  ..+..||||+|+||+|++.|.+++++|++.|+
T Consensus       414 ~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKt  491 (501)
T KOG2450|consen  414 EEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKT  491 (501)
T ss_pred             HHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEecccc--ccccCCccccccccCCccccHHHHhhcceeeE
Confidence            9999999999999999999999999999999999999999999864  67899999999999999999999999999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      |+++-
T Consensus       492 v~v~~  496 (501)
T KOG2450|consen  492 VTVKL  496 (501)
T ss_pred             EEEeC
Confidence            99873

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=2.4e-58  Score=440.15  Aligned_cols=239  Identities=24%  Similarity=0.440  Sum_probs=224.5

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+ +++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       255 ~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f-~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~  333 (501)
T PLN02766        255 QAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGD  333 (501)
T ss_pred             HHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence            4566 599999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +.+++||++++.++++++++|+++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       334 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~  413 (501)
T PLN02766        334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTV  413 (501)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCH
Confidence            96 5789999999999999999999986 577999999753 46899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+.|+|
T Consensus       414 deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v  491 (501)
T PLN02766        414 EEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSV  491 (501)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEE
Confidence            999999999999999999999999999999999999999998653  567899999999999999999999999999999


Q ss_pred             eEeCCC
Q 023415          238 LSRGFI  243 (282)
Q Consensus       238 ~~~~~~  243 (282)
                      ++..+.
T Consensus       492 ~~~~~~  497 (501)
T PLN02766        492 VTPLYN  497 (501)
T ss_pred             EEeccc
Confidence            887543

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=5.6e-58  Score=441.08  Aligned_cols=237  Identities=22%  Similarity=0.325  Sum_probs=223.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||++||||||||+||++|||++.|++.+++++| .|+||.|++++|||||++ +|+|+++|+++++++..|+|
T Consensus       345 ~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f-~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p  422 (604)
T PLN02419        345 ARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGF-GAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCG  422 (604)
T ss_pred             HHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCC
Confidence            5678999999999999999999999999999999999999 999999999999999999 99999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.++++++++|+++. +|+++++||...     +.|+|++|||+.+++++|.+++||+||||++|++|
T Consensus       423 ~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~  502 (604)
T PLN02419        423 SEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQA  502 (604)
T ss_pred             CCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEec
Confidence            5 6899999999999999999999986 578999998642     35899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--CcchHHHHHHhh
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFS  232 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~  232 (282)
                      +|+||||+++|+++|||+++|||+|.+++.+++.++++|.|+||+.. +...+.+||||+|.||+|  +++|.+++++|+
T Consensus       503 ~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft  581 (604)
T PLN02419        503 NSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFT  581 (604)
T ss_pred             CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCC-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999874 334578999999999999  799999999999


Q ss_pred             hccEEeEeC
Q 023415          233 HKKAVLSRG  241 (282)
Q Consensus       233 ~~k~v~~~~  241 (282)
                      +.|+|++..
T Consensus       582 ~~K~v~~~~  590 (604)
T PLN02419        582 QIKLVTQKQ  590 (604)
T ss_pred             CeEEEEEcc
Confidence            999998765

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=3.7e-58  Score=436.18  Aligned_cols=235  Identities=24%  Similarity=0.418  Sum_probs=222.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||++||||||||+||++|||+|.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p  311 (472)
T TIGR03374       233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGF-YNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAP  311 (472)
T ss_pred             HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHHh-c-CeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDKV-S-GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~~-~-~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++|+++.+ | +++++||...+ .|+|+.|||+.+++++|++++||+||||++|++|+|.
T Consensus       312 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~  391 (472)
T TIGR03374       312 DDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDE  391 (472)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCH
Confidence            5 68899999999999999999999874 5 58999987643 5899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+.|++
T Consensus       392 ~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i  469 (472)
T TIGR03374       392 EQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHI  469 (472)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhhceEEE
Confidence            999999999999999999999999999999999999999998764  457799999999999999999999999999998


Q ss_pred             eE
Q 023415          238 LS  239 (282)
Q Consensus       238 ~~  239 (282)
                      ++
T Consensus       470 ~~  471 (472)
T TIGR03374       470 MV  471 (472)
T ss_pred             EE
Confidence            75

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=9.2e-58  Score=425.97  Aligned_cols=236  Identities=25%  Similarity=0.445  Sum_probs=222.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|
T Consensus       168 ~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p  246 (409)
T PRK10090        168 AAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP  246 (409)
T ss_pred             HHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-C-CCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-E-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~-~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . + ++++||++++.++++++++|++++ +|+++++||..++ .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       247 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~  326 (409)
T PRK10090        247 AERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL  326 (409)
T ss_pred             CCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCH
Confidence            6 4 789999999999999999999986 5789999997643 5789999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++++++.++++|.|+||+...+.  +..||||+|.||+|+++|.+++++|++.|++
T Consensus       327 ~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v  404 (409)
T PRK10090        327 EEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEA--MQGFHAGWRKSGIGGADGKHGLHEYLQTQVV  404 (409)
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC--CCCCcCCcccccCCccchHHHHHHhcceEEE
Confidence            99999999999999999999999999999999999999999987543  4579999999999999999999999999998


Q ss_pred             eEe
Q 023415          238 LSR  240 (282)
Q Consensus       238 ~~~  240 (282)
                      ++.
T Consensus       405 ~~~  407 (409)
T PRK10090        405 YLQ  407 (409)
T ss_pred             EEe
Confidence            765

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=9.3e-58  Score=430.55  Aligned_cols=248  Identities=51%  Similarity=0.914  Sum_probs=230.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|++++||+++|||||||+||++|||++.|++.|++++| .|+||.|++++|||||++++|+|+++|++.+++++.++|
T Consensus       194 ~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~  272 (443)
T cd07132         194 QAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP  272 (443)
T ss_pred             HHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999988888


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      ++++++||++++.+++++++++++    +++++||..+..++|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus       273 ~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai  348 (443)
T cd07132         273 KESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAI  348 (443)
T ss_pred             CcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHH
Confidence            888999999999999999999873    5899998766568999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|+++|||+++|||+|.+++.++++++++|.|+||++..+...+.+||||+|.||+|+++|.+++++|++.|+++++.
T Consensus       349 ~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~  428 (443)
T cd07132         349 EFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS  428 (443)
T ss_pred             HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence            99999999999999999999999999999999999999876555578999999999999999999999999999998775


Q ss_pred             CCCC--CCCcCCCCc
Q 023415          242 FIGD--VPVRYPPYT  254 (282)
Q Consensus       242 ~~~~--~~~~~~~~~  254 (282)
                      ....  .+++|+|++
T Consensus       429 ~~~~~~~~~~~~~~~  443 (443)
T cd07132         429 LNMEKLNSLRYPPYS  443 (443)
T ss_pred             ccccccccccCCCCC
Confidence            3213  377888873

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=1.2e-57  Score=433.83  Aligned_cols=236  Identities=25%  Similarity=0.420  Sum_probs=222.2

Q ss_pred             hhhhh-cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~-~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+. ++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~  322 (486)
T cd07140         244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVF-FNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGD  322 (486)
T ss_pred             HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccC
Confidence            45675 89999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeC--
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--  155 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--  155 (282)
                      |. +++++||++++.++++++++|++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+  
T Consensus       323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~  402 (486)
T cd07140         323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG  402 (486)
T ss_pred             CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence            96 5899999999999999999999996 57899999975 3468999999999999999999999999999999998  


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |++|||+++|+++|||++||||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|
T Consensus       403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k  480 (486)
T cd07140         403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTK  480 (486)
T ss_pred             CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEE
Confidence            69999999999999999999999999999999999999999998643  4567999999999999999999999999999


Q ss_pred             EEeEe
Q 023415          236 AVLSR  240 (282)
Q Consensus       236 ~v~~~  240 (282)
                      +|++.
T Consensus       481 ~v~~~  485 (486)
T cd07140         481 TVTIE  485 (486)
T ss_pred             EEEEe
Confidence            98763

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=1.3e-57  Score=433.65  Aligned_cols=236  Identities=30%  Similarity=0.506  Sum_probs=223.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       238 ~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  316 (477)
T cd07113         238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP  316 (477)
T ss_pred             HHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHH-hhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++|+++. +|+++++||... +.|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d  396 (477)
T cd07113         317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE  396 (477)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence            6 5889999999999999999999986 688999999753 358999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus       397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~  474 (477)
T cd07113         397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVM  474 (477)
T ss_pred             HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEE
Confidence            99999999999999999999999999999999999999998653  4578999999999999999999999999999987


Q ss_pred             Ee
Q 023415          239 SR  240 (282)
Q Consensus       239 ~~  240 (282)
                      .+
T Consensus       475 ~~  476 (477)
T cd07113         475 IR  476 (477)
T ss_pred             Ee
Confidence            64

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-57  Score=430.18  Aligned_cols=236  Identities=25%  Similarity=0.434  Sum_probs=223.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       222 ~~aa~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  300 (462)
T PRK13968        222 AQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP  300 (462)
T ss_pred             HHHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||++++.++++++++++++. +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus       301 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~  380 (462)
T PRK13968        301 RDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAE  380 (462)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHH
Confidence            6 5789999999999999999999986 5789999987543 48999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       381 eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~  458 (462)
T PRK13968        381 HALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVW  458 (462)
T ss_pred             HHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEE
Confidence            99999999999999999999999999999999999999998753  4578999999999999999999999999999997


Q ss_pred             Ee
Q 023415          239 SR  240 (282)
Q Consensus       239 ~~  240 (282)
                      +.
T Consensus       459 ~~  460 (462)
T PRK13968        459 KD  460 (462)
T ss_pred             Ee
Confidence            65

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=2.7e-57  Score=432.92  Aligned_cols=237  Identities=28%  Similarity=0.471  Sum_probs=223.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|++++||+++|||||||+||++|||++.|++.|++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       257 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p  335 (498)
T PLN02278        257 AGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKF-RNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDG  335 (498)
T ss_pred             HHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHh-ccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++|+++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~d  415 (498)
T PLN02278        336 FEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEE  415 (498)
T ss_pred             CCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHH
Confidence            5 6889999999999999999999986 578999999754 358999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||+...+  .+.+||||+|.||+|+++|++++++|++.|+|.
T Consensus       416 eai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~  493 (498)
T PLN02278        416 EAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVC  493 (498)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHhheeEEEE
Confidence            999999999999999999999999999999999999999987643  367899999999999999999999999999998


Q ss_pred             EeC
Q 023415          239 SRG  241 (282)
Q Consensus       239 ~~~  241 (282)
                      ++.
T Consensus       494 ~~~  496 (498)
T PLN02278        494 LGN  496 (498)
T ss_pred             Eec
Confidence            654

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=2.1e-57  Score=426.68  Aligned_cols=236  Identities=68%  Similarity=1.090  Sum_probs=224.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhccc-CCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      +.|++++||+++|||||||+||++|||++.|++.+++++| . |+||.|++++|+|||++++|+|+++|++++++++.|+
T Consensus       195 ~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f-~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~  273 (432)
T cd07137         195 AAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKW-GCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGEN  273 (432)
T ss_pred             HHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhh-hccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCC
Confidence            4577899999999999999999999999999999999998 7 9999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           81 PLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        81 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                      |.+.+++||++++.+++++.+++++++.++++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       274 p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea  353 (432)
T cd07137         274 PKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEES  353 (432)
T ss_pred             CCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHH
Confidence            97788999999999999999999999888899999876556899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+++|+++|||+++|||+|.+++++++.++++|.|+||++..+...+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       354 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         354 IEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             HHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence            999999999999999999999999999999999999999766545578999999999999999999999999999875

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=3.5e-57  Score=427.74  Aligned_cols=234  Identities=25%  Similarity=0.428  Sum_probs=222.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       209 ~~aa~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p  287 (446)
T cd07106         209 ASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAF-INSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDG  287 (446)
T ss_pred             HHHHhcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++++++. +|+++++||...+ .|+|+.|||+.+++++|++++||+||||++|++|+|++
T Consensus       288 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~  367 (446)
T cd07106         288 LDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDED  367 (446)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHH
Confidence            5 6899999999999999999999886 5789999997643 58899999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus       368 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         368 EVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            99999999999999999999999999999999999999999763  4578999999999999999999999999999875

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=3.4e-57  Score=431.25  Aligned_cols=236  Identities=22%  Similarity=0.382  Sum_probs=223.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|
T Consensus       237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  315 (481)
T TIGR03216       237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVP  315 (481)
T ss_pred             HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC------CCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~------~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      . +++++||++++.+++++++++++++ +|+++++||..+      ..|+|++|||+.+++++|++++||+||||++|++
T Consensus       316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~  395 (481)
T TIGR03216       316 DDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAP  395 (481)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEE
Confidence            6 5899999999999999999999986 578999998753      3589999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 023415          154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH  233 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~  233 (282)
                      |+|.+|||+++|+++|||+++|||+|.++++++++++++|.|+||+...+  .+.+||||+|.||+|+++|.+++++|++
T Consensus       396 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~  473 (481)
T TIGR03216       396 FDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTE  473 (481)
T ss_pred             eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999987653  4679999999999999999999999999


Q ss_pred             ccEEeEe
Q 023415          234 KKAVLSR  240 (282)
Q Consensus       234 ~k~v~~~  240 (282)
                      .|+++++
T Consensus       474 ~k~v~~~  480 (481)
T TIGR03216       474 LTNVCIK  480 (481)
T ss_pred             eEEEEEe
Confidence            9998763

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=4.6e-57  Score=429.22  Aligned_cols=236  Identities=28%  Similarity=0.451  Sum_probs=222.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       232 ~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p  310 (475)
T cd07117         232 IAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNP  310 (475)
T ss_pred             HHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHh-hccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +++++||++++.++++++++++++. +|+++++||...     ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus       311 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~  390 (475)
T cd07117         311 LDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKF  390 (475)
T ss_pred             CCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEE
Confidence            5 6789999999999999999999986 578999998753     25889999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|.+|||+++|+++|||+++|||+|.+++.+++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.
T Consensus       391 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~  468 (475)
T cd07117         391 KTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQM  468 (475)
T ss_pred             CCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCe
Confidence            999999999999999999999999999999999999999999998643  457899999999999999999999999999


Q ss_pred             cEEeEe
Q 023415          235 KAVLSR  240 (282)
Q Consensus       235 k~v~~~  240 (282)
                      |++++.
T Consensus       469 k~v~~~  474 (475)
T cd07117         469 KNIYID  474 (475)
T ss_pred             EEEEEe
Confidence            998753

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=4.4e-57  Score=427.87  Aligned_cols=236  Identities=22%  Similarity=0.398  Sum_probs=221.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       213 ~~aa~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~  291 (454)
T cd07101         213 ERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACF-SNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA  291 (454)
T ss_pred             HHHHhcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHH-hcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999988


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++++++. +|+++++||...  ..++|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       292 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~  371 (454)
T cd07101         292 LDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADD  371 (454)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCH
Confidence            5 6889999999999999999999986 578999998642  24789999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      ||||+++|+++|||+++|||+|.+++.++++++++|.|+||++..+ ...+.+||||+|.||+|+++|++++++|++.|+
T Consensus       372 ~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~  451 (454)
T cd07101         372 DEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQT  451 (454)
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEE
Confidence            9999999999999999999999999999999999999999997653 355678999999999999999999999999998


Q ss_pred             Ee
Q 023415          237 VL  238 (282)
Q Consensus       237 v~  238 (282)
                      ++
T Consensus       452 v~  453 (454)
T cd07101         452 VA  453 (454)
T ss_pred             Ee
Confidence            76

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=3.1e-57  Score=428.14  Aligned_cols=231  Identities=26%  Similarity=0.458  Sum_probs=218.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|+.++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       215 ~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p  293 (448)
T TIGR01780       215 KQSASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKF-RNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNG  293 (448)
T ss_pred             HHHhhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHH-HhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++|++++ +|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus       294 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~  373 (448)
T TIGR01780       294 LDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEE  373 (448)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHH
Confidence            5 6899999999999999999999986 578999999754 358899999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus       374 eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       374 EVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999754  4567899999999999999999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=5.3e-57  Score=427.57  Aligned_cols=236  Identities=26%  Similarity=0.410  Sum_probs=222.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHh-cccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~-~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++ | .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       212 ~~aa~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~  290 (456)
T cd07107         212 RAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNF-TWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD  290 (456)
T ss_pred             HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchh-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence            457789999999999999999999999999999999995 8 89999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      |. +++++||++++.++++++++|+++. +|+++++||...     ..|+|++|||+.+++++|++++||+||||++|++
T Consensus       291 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~  370 (456)
T cd07107         291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLR  370 (456)
T ss_pred             CCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEe
Confidence            96 6889999999999999999999886 578999999652     2589999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 023415          154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH  233 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~  233 (282)
                      |+|+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++..+  .+.+||||+|.||+|+++|++++++||+
T Consensus       371 ~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~  448 (456)
T cd07107         371 WRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRH--FLGAPFGGVKNSGIGREECLEELLSYTQ  448 (456)
T ss_pred             eCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999997653  4679999999999999999999999999


Q ss_pred             ccEEeEe
Q 023415          234 KKAVLSR  240 (282)
Q Consensus       234 ~k~v~~~  240 (282)
                      .|+|+++
T Consensus       449 ~k~v~~~  455 (456)
T cd07107         449 EKNVNVR  455 (456)
T ss_pred             eEEEEEe
Confidence            9998763

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-57  Score=429.32  Aligned_cols=237  Identities=23%  Similarity=0.395  Sum_probs=224.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       234 ~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p  312 (475)
T PRK13473        234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDP  312 (475)
T ss_pred             HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHHh-c-CeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDKV-S-GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~~-~-~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++++++.+ | +++++||... ..|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus       313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~  392 (475)
T PRK13473        313 DDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDE  392 (475)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCH
Confidence            5 68899999999999999999999864 5 7999999864 35889999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|++
T Consensus       393 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i  470 (475)
T PRK13473        393 DQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV  470 (475)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceEEE
Confidence            999999999999999999999999999999999999999999765  356799999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      ++++
T Consensus       471 ~~~~  474 (475)
T PRK13473        471 MVKH  474 (475)
T ss_pred             EEec
Confidence            8764

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=6.3e-57  Score=426.41  Aligned_cols=235  Identities=26%  Similarity=0.466  Sum_probs=222.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       219 ~~a~~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p  297 (457)
T PRK09406        219 AIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARV-QNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDP  297 (457)
T ss_pred             HHHHhcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHh-hCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||++++.++++++++++++. +|+++++||..+ ..|+|++|||+.+++++|.+++||+||||++|++|+|++
T Consensus       298 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~  377 (457)
T PRK09406        298 TDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADID  377 (457)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHH
Confidence            6 5789999999999999999999986 578999999763 368999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+++.+++.++++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus       378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~  455 (457)
T PRK09406        378 EAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVW  455 (457)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEE
Confidence            99999999999999999999999999999999999999998764  4577999999999999999999999999999986


Q ss_pred             E
Q 023415          239 S  239 (282)
Q Consensus       239 ~  239 (282)
                      +
T Consensus       456 ~  456 (457)
T PRK09406        456 I  456 (457)
T ss_pred             e
Confidence            4

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=1e-56  Score=428.82  Aligned_cols=237  Identities=26%  Similarity=0.462  Sum_probs=223.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       232 ~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p  310 (488)
T TIGR02299       232 RNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHP  310 (488)
T ss_pred             HHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--------CCCceecceEEeeCCCCCcccccccccceeeE
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI  151 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--------~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v  151 (282)
                      . +.+++||++++.++++++++++++. .|+++++||...        ..|+|++|||+.+++++|++++||+||||++|
T Consensus       311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v  390 (488)
T TIGR02299       311 LDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTV  390 (488)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEE
Confidence            6 5789999999999999999999986 578999998653        24889999999999999999999999999999


Q ss_pred             EeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHh
Q 023415          152 LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF  231 (282)
Q Consensus       152 ~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~  231 (282)
                      ++|+|.+|||+++|+++|||++||||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++|
T Consensus       391 ~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~  468 (488)
T TIGR02299       391 IPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTYSFDFY  468 (488)
T ss_pred             EeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHH
Confidence            999999999999999999999999999999999999999999999998764  356789999999999999999999999


Q ss_pred             hhccEEeEeC
Q 023415          232 SHKKAVLSRG  241 (282)
Q Consensus       232 ~~~k~v~~~~  241 (282)
                      ++.|+++++.
T Consensus       469 ~~~k~i~~~~  478 (488)
T TIGR02299       469 TETKNVALAL  478 (488)
T ss_pred             hceEEEEEec
Confidence            9999998764

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=6.4e-57  Score=429.33  Aligned_cols=235  Identities=28%  Similarity=0.432  Sum_probs=222.0

Q ss_pred             hhhhh-cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~-~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+. ++||+++|||||||+||++|||++.|++.|++++| .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  320 (481)
T cd07141         242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALF-FNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN  320 (481)
T ss_pred             HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence            34565 89999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +.+++||++++.+++++.++|+++. +|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus       321 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~  400 (481)
T cd07141         321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI  400 (481)
T ss_pred             CCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence            96 5799999999999999999999986 577999999863 46899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|++
T Consensus       401 ~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v  478 (481)
T cd07141         401 DEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTV  478 (481)
T ss_pred             HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEE
Confidence            999999999999999999999999999999999999999998653  567899999999999999999999999999998


Q ss_pred             eE
Q 023415          238 LS  239 (282)
Q Consensus       238 ~~  239 (282)
                      ++
T Consensus       479 ~~  480 (481)
T cd07141         479 TI  480 (481)
T ss_pred             EE
Confidence            75

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=6.8e-57  Score=428.86  Aligned_cols=237  Identities=23%  Similarity=0.397  Sum_probs=224.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.|++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       233 ~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  311 (478)
T cd07086         233 ETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDP  311 (478)
T ss_pred             HHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHH-hccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +++++||++++.+++++++++++++ +|+++++||....   .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       312 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~  391 (478)
T cd07086         312 LDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDS  391 (478)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCC
Confidence            6 5789999999999999999999996 5789999997644   588999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhh--cccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET--VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~--l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +||||+++|+++|||+++|||+|.+++++++++  +++|+|+||++..+ ..+.+||||+|.||+|+++|.+++++|++.
T Consensus       392 ~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~  470 (478)
T cd07086         392 LEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRR  470 (478)
T ss_pred             HHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhce
Confidence            999999999999999999999999999999999  99999999997654 457899999999999999999999999999


Q ss_pred             cEEeEe
Q 023415          235 KAVLSR  240 (282)
Q Consensus       235 k~v~~~  240 (282)
                      |+|+++
T Consensus       471 k~i~~~  476 (478)
T cd07086         471 STCTIN  476 (478)
T ss_pred             EEEEEe
Confidence            999865

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=7.1e-57  Score=428.61  Aligned_cols=236  Identities=26%  Similarity=0.421  Sum_probs=223.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCC-----CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhc
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF   76 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dA-----Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~   76 (282)
                      ++|++++||+++|||||||+||++||     |++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++
T Consensus       232 ~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  310 (480)
T cd07559         232 QYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFA-FNQGEVCTCPSRALVQESIYDEFIERAVERFEAI  310 (480)
T ss_pred             HHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHH-hhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence            56788999999999999999999999     99999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCccccccccccee
Q 023415           77 YGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLL  149 (282)
Q Consensus        77 ~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl  149 (282)
                      ++|+|. +.+++||++++.++++++++|++++ +|+++++||...     ..|+|++|||+.+++++|++++||+||||+
T Consensus       311 ~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  390 (480)
T cd07559         311 KVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVL  390 (480)
T ss_pred             CCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceE
Confidence            999996 6789999999999999999999986 578999998763     358999999999999999999999999999


Q ss_pred             eEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHH
Q 023415          150 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD  229 (282)
Q Consensus       150 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~  229 (282)
                      +|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|.++++
T Consensus       391 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~  468 (480)
T cd07559         391 AVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLD  468 (480)
T ss_pred             EEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHH
Confidence            99999999999999999999999999999999999999999999999997643  4568999999999999999999999


Q ss_pred             HhhhccEEeEe
Q 023415          230 VFSHKKAVLSR  240 (282)
Q Consensus       230 ~~~~~k~v~~~  240 (282)
                      +||+.|+++++
T Consensus       469 ~~~~~k~v~~~  479 (480)
T cd07559         469 HYQQTKNILVS  479 (480)
T ss_pred             HhhceEEEEEe
Confidence            99999998764

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=9.3e-57  Score=431.51  Aligned_cols=237  Identities=26%  Similarity=0.424  Sum_probs=222.1

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+ .++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++.+++.|+
T Consensus       292 ~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~  370 (538)
T PLN02466        292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF-FNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGD  370 (538)
T ss_pred             HHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHH-hhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence            3466 489999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +.+++||++++.++++++++++++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       371 p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~  450 (538)
T PLN02466        371 PFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDL  450 (538)
T ss_pred             CccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCH
Confidence            85 6899999999999999999999986 577999998763 35889999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus       451 deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v  528 (538)
T PLN02466        451 DEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAV  528 (538)
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEE
Confidence            999999999999999999999999999999999999999998643  457899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      ++..
T Consensus       529 ~~~~  532 (538)
T PLN02466        529 VTPL  532 (538)
T ss_pred             EEeC
Confidence            7753

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=6.7e-57  Score=426.72  Aligned_cols=236  Identities=30%  Similarity=0.506  Sum_probs=224.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       214 ~~aa~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~  292 (453)
T cd07099         214 AAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAM-VNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGAD  292 (453)
T ss_pred             HHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.+++++++++++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus       293 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~  372 (453)
T cd07099         293 DIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADED  372 (453)
T ss_pred             CCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHH
Confidence            5 6899999999999999999999986 578999998765 468999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||+...+...+.+||||+|.||+|+++|++++++||+.|+++
T Consensus       373 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         373 EAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            99999999999999999999999999999999999999999876666789999999999999999999999999999976

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-56  Score=428.31  Aligned_cols=237  Identities=27%  Similarity=0.438  Sum_probs=223.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       238 ~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  316 (488)
T PRK13252        238 AAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANF-YSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDP  316 (488)
T ss_pred             HHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678889999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||...     ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus       317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~  396 (488)
T PRK13252        317 MDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTF  396 (488)
T ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEee
Confidence            5 6889999999999999999999886 578999998642     25899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|++|||+++|+++|||+++|||+|.+++.+++.++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.
T Consensus       397 ~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~  474 (488)
T PRK13252        397 DDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQI  474 (488)
T ss_pred             CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcce
Confidence            999999999999999999999999999999999999999999998543  456799999999999999999999999999


Q ss_pred             cEEeEeC
Q 023415          235 KAVLSRG  241 (282)
Q Consensus       235 k~v~~~~  241 (282)
                      |+|++..
T Consensus       475 k~i~~~~  481 (488)
T PRK13252        475 KSVQVEM  481 (488)
T ss_pred             EEEEEeC
Confidence            9998763

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.1e-57  Score=399.00  Aligned_cols=238  Identities=26%  Similarity=0.440  Sum_probs=225.8

Q ss_pred             ChhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         1 ~~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      |+++|.++|++.||||||.|.||++|||||.|++..+..+| .|+||+|++.+|+|||++|||+|+.+|.++++++++||
T Consensus       258 ~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KF-r~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGd  336 (503)
T KOG2451|consen  258 MAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKF-RNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGD  336 (503)
T ss_pred             HHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhh-ccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccC
Confidence            45788999999999999999999999999999999999999 99999999999999999999999999999999999998


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCC-CceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~-g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      -. +++..||+||+.+.++++++++||. .|+++++||.. .+. .+|++|||+.+++.+|.+.+||+|||+.+|++|+|
T Consensus       337 G~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdt  416 (503)
T KOG2451|consen  337 GLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDT  416 (503)
T ss_pred             CCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCC
Confidence            74 7899999999999999999999997 57899999984 343 48999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +||+|+++|++..||++|+||+|.++..+++++|++|.|.+|....  +....||||+|+||.|++++++|+++|+..|.
T Consensus       417 eeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyGidey~~ik~  494 (503)
T KOG2451|consen  417 EEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYGIDEYLVIKY  494 (503)
T ss_pred             HHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeeccccee--cccccCcCCccccccCccccccchhhhhhhhe
Confidence            9999999999999999999999999999999999999999999764  56789999999999999999999999999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      +++..
T Consensus       495 icig~  499 (503)
T KOG2451|consen  495 ICIGT  499 (503)
T ss_pred             eeecC
Confidence            98765

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=1.2e-56  Score=422.00  Aligned_cols=234  Identities=27%  Similarity=0.475  Sum_probs=221.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.|++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus       192 ~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p  270 (429)
T cd07100         192 AEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL-QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDP  270 (429)
T ss_pred             HHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||...+ .|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus       271 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~  350 (429)
T cd07100         271 MDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE  350 (429)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHH
Confidence            5 6889999999999999999999986 5779999987543 58999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus       351 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         351 EAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK--SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence            99999999999999999999999999999999999999999764  4577999999999999999999999999999875

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=1.7e-56  Score=426.01  Aligned_cols=234  Identities=27%  Similarity=0.451  Sum_probs=220.7

Q ss_pred             hhhhh-cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~-~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++ ++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++.+++.|+
T Consensus       238 ~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  316 (476)
T cd07142         238 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF-FNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGD  316 (476)
T ss_pred             HHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHh-cCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence            45665 99999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +.+++||++++.++++++++++++. +|+++++||... ..|+|+.|||+.++++++++++||+||||++|++|+|+
T Consensus       317 p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~  396 (476)
T cd07142         317 PFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTV  396 (476)
T ss_pred             CCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCH
Confidence            86 6789999999999999999999886 577999999763 36889999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++.++++++++|.|+||+..  ...+.+||||+|.||+|+++|.+++++||+.|++
T Consensus       397 ~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v  474 (476)
T cd07142         397 DEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYD--VFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV  474 (476)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCCCCCccCcCCccchHHHHHHhhheeEE
Confidence            99999999999999999999999999999999999999999864  3567899999999999999999999999999987


Q ss_pred             e
Q 023415          238 L  238 (282)
Q Consensus       238 ~  238 (282)
                      +
T Consensus       475 ~  475 (476)
T cd07142         475 V  475 (476)
T ss_pred             e
Confidence            5

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=1.8e-56  Score=424.79  Aligned_cols=235  Identities=28%  Similarity=0.515  Sum_probs=222.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       228 ~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  306 (465)
T cd07151         228 ELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKF-LHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDP  306 (465)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +.+++||++++.++++++++++++. +|+++++||..  .|+|++|||+.++++++++++||+||||++|++|+|+||
T Consensus       307 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e  384 (465)
T cd07151         307 SDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEE  384 (465)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHH
Confidence            6 5789999999999999999999886 57799999864  588999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      ||+++|+++|||+++|||+|.++++++++++++|.|+||+.+.+ ..+.+||||+|.||+|+++|++++++|++.|++++
T Consensus       385 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~  463 (465)
T cd07151         385 ALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV  463 (465)
T ss_pred             HHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence            99999999999999999999999999999999999999997654 34679999999999999999999999999999876


Q ss_pred             e
Q 023415          240 R  240 (282)
Q Consensus       240 ~  240 (282)
                      .
T Consensus       464 ~  464 (465)
T cd07151         464 Q  464 (465)
T ss_pred             c
Confidence            3

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=2e-56  Score=425.77  Aligned_cols=237  Identities=25%  Similarity=0.352  Sum_probs=222.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       232 ~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p  310 (478)
T cd07085         232 ERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAF-GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAG  310 (478)
T ss_pred             HHHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4677899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +++++||++++.++++++++|+++. +|+++++||...     ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus       311 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~  390 (478)
T cd07085         311 DDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRV  390 (478)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEe
Confidence            5 6899999999999999999999985 678999998642     35899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC--cchHHHHHHhh
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA--YHGKFSFDVFS  232 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~--~~g~~~l~~~~  232 (282)
                      +|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ...+.+||||+|.||+|+  ++|++++++|+
T Consensus       391 ~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~  469 (478)
T cd07085         391 DTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYT  469 (478)
T ss_pred             CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhc
Confidence            999999999999999999999999999999999999999999998743 345679999999999994  68999999999


Q ss_pred             hccEEeEe
Q 023415          233 HKKAVLSR  240 (282)
Q Consensus       233 ~~k~v~~~  240 (282)
                      +.|+|++.
T Consensus       470 ~~k~v~~~  477 (478)
T cd07085         470 QTKTVTSR  477 (478)
T ss_pred             ceEEEEEe
Confidence            99998764

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=1.8e-56  Score=425.65  Aligned_cols=235  Identities=28%  Similarity=0.453  Sum_probs=221.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       232 ~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  310 (473)
T cd07097         232 AAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAF-FSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDA  310 (473)
T ss_pred             HHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||...   ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus       311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~  390 (473)
T cd07097         311 LDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRD  390 (473)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCC
Confidence            5 6789999999999999999999986 578999998753   2478999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhcc
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKK  235 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k  235 (282)
                      ++|||+++|+++|||+++|||+|.+++.+++.++++|.|+||++..+ ..+.+||||+|.||+| +++|++++++|++.|
T Consensus       391 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k  469 (473)
T cd07097         391 YDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALEFYTTIK  469 (473)
T ss_pred             HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHHHhhcee
Confidence            99999999999999999999999999999999999999999987644 3467999999999999 899999999999999


Q ss_pred             EEe
Q 023415          236 AVL  238 (282)
Q Consensus       236 ~v~  238 (282)
                      +|.
T Consensus       470 ~v~  472 (473)
T cd07097         470 TVY  472 (473)
T ss_pred             EEe
Confidence            985

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=1.3e-56  Score=421.87  Aligned_cols=234  Identities=47%  Similarity=0.848  Sum_probs=223.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       202 ~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  280 (436)
T cd07135         202 EAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF-GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA  280 (436)
T ss_pred             HHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh-ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      ++++++||++++.+++++.++++++  ++++++||..++.|+|++|||+.++++++++++||+||||++|++|+|+||||
T Consensus       281 ~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai  358 (436)
T cd07135         281 NASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAI  358 (436)
T ss_pred             CCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHH
Confidence            7788999999999999999999977  88999999876678999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      +++|+++|||+++|||+|.++++++++++++|.|+||+...+...+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       359 ~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         359 KVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             HHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            99999999999999999999999999999999999998776555688999999999999999999999999999864

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=2.3e-56  Score=420.25  Aligned_cols=235  Identities=41%  Similarity=0.733  Sum_probs=221.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++++ 
T Consensus       195 ~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-  272 (434)
T cd07133         195 RAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKL-LNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-  272 (434)
T ss_pred             HHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHh-ccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-
Confidence            4678899999999999999999999999999999999999 99999999999999999999999999999999998876 


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      .+.+++||++++.+++++++++++++ +|+++++||...   ..|+|++|||+.+++++|++++||+||||++|++|+|.
T Consensus       273 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~  352 (434)
T cd07133         273 ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSL  352 (434)
T ss_pred             CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCH
Confidence            46789999999999999999999986 578999988653   35899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus       353 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v  432 (434)
T cd07133         353 DEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPV  432 (434)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhccccee
Confidence            99999999999999999999999999999999999999999987655668899999999999999999999999999987


Q ss_pred             e
Q 023415          238 L  238 (282)
Q Consensus       238 ~  238 (282)
                      +
T Consensus       433 ~  433 (434)
T cd07133         433 F  433 (434)
T ss_pred             c
Confidence            4

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=5.1e-56  Score=426.47  Aligned_cols=239  Identities=22%  Similarity=0.392  Sum_probs=224.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus       249 ~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~  327 (524)
T PRK09407        249 EQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAG  327 (524)
T ss_pred             HHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999988


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +.+++||++++.++++++++++++. +|+++++||...  ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus       328 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~  407 (524)
T PRK09407        328 YDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADV  407 (524)
T ss_pred             CCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCH
Confidence            5 6889999999999999999999986 578999998743  24789999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +|||+++|+++|||+++|||+|.+++.++++++++|.|+||+...+ ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       408 deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~  487 (524)
T PRK09407        408 DEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQT  487 (524)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEE
Confidence            9999999999999999999999999999999999999999996543 244678999999999999999999999999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      |+++.
T Consensus       488 v~~~~  492 (524)
T PRK09407        488 IATQR  492 (524)
T ss_pred             EEEcc
Confidence            98774

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=3.3e-56  Score=423.61  Aligned_cols=236  Identities=21%  Similarity=0.352  Sum_probs=220.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       232 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p  310 (474)
T cd07130         232 QAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDP  310 (474)
T ss_pred             HHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||++++.++++++++++++. +|+++++||... ..|+|++|||+.++++ |++++||+||||++|++|+|++
T Consensus       311 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~  389 (474)
T cd07130         311 LDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLE  389 (474)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHH
Confidence            6 5789999999999999999999996 678999999853 3589999999998776 9999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhh--cccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVET--VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~--l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      |||+++|+++|||+++|||+|.+++++++++  +++|.|+||..+. ...+.+||||+|.||+|+++|++++++|++.|+
T Consensus       390 eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~  468 (474)
T cd07130         390 EAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQYMRRST  468 (474)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHHHhheEE
Confidence            9999999999999999999999999999987  8999999998653 245679999999999999999999999999999


Q ss_pred             EeEe
Q 023415          237 VLSR  240 (282)
Q Consensus       237 v~~~  240 (282)
                      +.+.
T Consensus       469 ~~~~  472 (474)
T cd07130         469 CTIN  472 (474)
T ss_pred             EEEe
Confidence            8764

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=3.5e-56  Score=424.73  Aligned_cols=236  Identities=29%  Similarity=0.489  Sum_probs=221.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh-ccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~   80 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++ +++|+
T Consensus       241 ~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~  319 (484)
T cd07144         241 KAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIM-YNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGS  319 (484)
T ss_pred             HHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCC
Confidence            4677899999999999999999999999999999999999 999999999999999999999999999999985 78898


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC----CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~----~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      |. +++++||++++.+++++.+++++++ .|+++++||....    .|+|++|||+.+++++|++++||+||||++|++|
T Consensus       320 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~  399 (484)
T cd07144         320 PFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKF  399 (484)
T ss_pred             CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEecc
Confidence            85 6889999999999999999999986 5789999987642    5899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|++|||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.
T Consensus       400 ~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~  477 (484)
T cd07144         400 KTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQT  477 (484)
T ss_pred             CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhce
Confidence            999999999999999999999999999999999999999999998753  457799999999999999999999999999


Q ss_pred             cEEeEe
Q 023415          235 KAVLSR  240 (282)
Q Consensus       235 k~v~~~  240 (282)
                      |+|..+
T Consensus       478 k~v~~~  483 (484)
T cd07144         478 KAVHIN  483 (484)
T ss_pred             EEEEEe
Confidence            998764

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=3.4e-56  Score=421.92  Aligned_cols=235  Identities=29%  Similarity=0.467  Sum_probs=222.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       214 ~~aa~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p  292 (454)
T cd07109         214 RAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAII-QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG  292 (454)
T ss_pred             HHHhhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC----CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      .+++++||++++.+++++.+++++++ +|+++++||...    ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus       293 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~  372 (454)
T cd07109         293 LEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDD  372 (454)
T ss_pred             cccCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCC
Confidence            87889999999999999999999986 578999998753    2588999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      ++|||+++|+++|||+++|||+|.+++.++++++++|.|+||++..+ ..+.+||||+|.||+|+++|++++++|++.|+
T Consensus       373 ~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~  451 (454)
T cd07109         373 EAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKT  451 (454)
T ss_pred             HHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeE
Confidence            99999999999999999999999999999999999999999997633 35688999999999999999999999999998


Q ss_pred             Ee
Q 023415          237 VL  238 (282)
Q Consensus       237 v~  238 (282)
                      |+
T Consensus       452 i~  453 (454)
T cd07109         452 VA  453 (454)
T ss_pred             Ee
Confidence            85

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=3.9e-56  Score=421.79  Aligned_cols=236  Identities=29%  Similarity=0.503  Sum_probs=222.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       212 ~~aa~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  290 (457)
T cd07090         212 SAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDP  290 (457)
T ss_pred             HHHhccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC------CCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~------~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      . +.+++||++++.+++++.++|++++ +|+++++||...      ..|+|++|||+.+++++|+++++|+||||++|++
T Consensus       291 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~  370 (457)
T cd07090         291 LDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILP  370 (457)
T ss_pred             CCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEE
Confidence            5 6889999999999999999999986 578999998752      2488999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 023415          154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH  233 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~  233 (282)
                      |+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+
T Consensus       371 ~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~  448 (457)
T cd07090         371 FDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQ  448 (457)
T ss_pred             ECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999998643  45779999999999999999999999999


Q ss_pred             ccEEeEe
Q 023415          234 KKAVLSR  240 (282)
Q Consensus       234 ~k~v~~~  240 (282)
                      .|++.+.
T Consensus       449 ~k~~~~~  455 (457)
T cd07090         449 LKTVYVE  455 (457)
T ss_pred             eEEEEEe
Confidence            9998764

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=5.3e-56  Score=423.41  Aligned_cols=237  Identities=25%  Similarity=0.422  Sum_probs=223.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||+++||+|+++|++++.++++|+|
T Consensus       231 ~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~  309 (482)
T cd07119         231 RAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNG  309 (482)
T ss_pred             HHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999988


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-----CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||....     .|+|++|||+.+++++|++++||+||||++|++|
T Consensus       310 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~  389 (482)
T cd07119         310 LDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERF  389 (482)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEecc
Confidence            5 6789999999999999999999986 5779999997532     5899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|++|||+++|+++|||++||||+|.+++.+++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.
T Consensus       390 ~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~  467 (482)
T cd07119         390 DTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQET  467 (482)
T ss_pred             CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhce
Confidence            999999999999999999999999999999999999999999998643  457899999999999999999999999999


Q ss_pred             cEEeEeC
Q 023415          235 KAVLSRG  241 (282)
Q Consensus       235 k~v~~~~  241 (282)
                      |++++..
T Consensus       468 k~v~~~~  474 (482)
T cd07119         468 KHININL  474 (482)
T ss_pred             EEEEEec
Confidence            9998764

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=3.6e-56  Score=426.84  Aligned_cols=233  Identities=24%  Similarity=0.413  Sum_probs=221.8

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      ++||+++|||||||+||++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +.+
T Consensus       274 ~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~  352 (512)
T cd07124         274 WLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEV  352 (512)
T ss_pred             CCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence            79999999999999999999999999999999999 9999999999999999999999999999999999999996 578


Q ss_pred             cccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD  162 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~  162 (282)
                      ++||++++.+++++.++|+++.+++++++||..++   .|+|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus       353 ~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~  432 (512)
T cd07124         353 YMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALE  432 (512)
T ss_pred             cccCCcCHHHHHHHHHHHHHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHH
Confidence            99999999999999999999988899999997654   589999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 023415          163 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       163 ~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~  240 (282)
                      ++|+++|||+++|||+|.+.+.++++++++|.|+||+..++...+.+||||+|.||+| +.+|++++++||+.|+|+++
T Consensus       433 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         433 IANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             HHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence            9999999999999999999999999999999999999876655677999999999999 77889999999999998764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=3.3e-56  Score=421.28  Aligned_cols=234  Identities=25%  Similarity=0.374  Sum_probs=220.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       215 ~~aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p  293 (455)
T cd07120         215 AAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALT-IFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPG  293 (455)
T ss_pred             HHHHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CC---CCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +++++||++++.++++++++++++. +++++++||.. +.   .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       294 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~  373 (455)
T cd07120         294 LDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFD  373 (455)
T ss_pred             CCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecC
Confidence            5 6899999999999999999999986 57899987754 32   58999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|
T Consensus       374 ~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k  451 (455)
T cd07120         374 DEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYK  451 (455)
T ss_pred             CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhcee
Confidence            99999999999999999999999999999999999999999999764  3567999999999999999999999999999


Q ss_pred             EEe
Q 023415          236 AVL  238 (282)
Q Consensus       236 ~v~  238 (282)
                      +|+
T Consensus       452 ~v~  454 (455)
T cd07120         452 HIY  454 (455)
T ss_pred             EEe
Confidence            986

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=3.9e-56  Score=421.70  Aligned_cols=234  Identities=30%  Similarity=0.510  Sum_probs=221.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       217 ~~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  295 (456)
T cd07110         217 QAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCF-WNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDP  295 (456)
T ss_pred             HHHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +++++||++++.++++++++++++. .|+++++||..+   ..|+|+.|||+.+++++|+++++|+||||++|++|+|
T Consensus       296 ~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~  375 (456)
T cd07110         296 LEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT  375 (456)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCC
Confidence            6 5899999999999999999999986 577999998764   3588999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      .+|||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|+
T Consensus       376 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~  453 (456)
T cd07110         376 EDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQ  453 (456)
T ss_pred             HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeE
Confidence            9999999999999999999999999999999999999999998653  45789999999999999999999999999999


Q ss_pred             Ee
Q 023415          237 VL  238 (282)
Q Consensus       237 v~  238 (282)
                      ++
T Consensus       454 i~  455 (456)
T cd07110         454 IT  455 (456)
T ss_pred             Ee
Confidence            75

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=4.5e-56  Score=426.43  Aligned_cols=239  Identities=21%  Similarity=0.392  Sum_probs=221.4

Q ss_pred             hhhhhcCC------cEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415            2 AAAAKHLT------PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~~~------~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~   75 (282)
                      ++||++++      |+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus       266 ~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  344 (522)
T cd07123         266 KQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPESLWPEVKERLLEELKE  344 (522)
T ss_pred             HHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhh
Confidence            46778887      99999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             ccCCCCC-CCCcccccCCHHHHHHHHHHHHHHH-h-cCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeE
Q 023415           76 FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI  151 (282)
Q Consensus        76 ~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v  151 (282)
                      +++|+|. +.+++||++++.++++++++++++. + |+++++||..+ ..|+|++|||+.+++++|++++||+||||++|
T Consensus       345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V  424 (522)
T cd07123         345 IKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTV  424 (522)
T ss_pred             CccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEE
Confidence            9999996 5789999999999999999999986 4 77999998754 35899999999999999999999999999999


Q ss_pred             EeeCC--HHHHHHHHhcCC-CCceEEEecCCHHHHHHHHhhc--ccceEEECCCCcccCCCCCCcccCCCCCCC-CcchH
Q 023415          152 LTVDK--IEDSFDIINSGT-KPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGK  225 (282)
Q Consensus       152 ~~~~~--~~eai~~~n~~~-~gL~a~i~t~d~~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~  225 (282)
                      ++|+|  ++|+|+++|++. |||++||||+|.+++.++++++  ++|.|+||+...+...+.+||||+|.||+| +++|.
T Consensus       425 ~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~  504 (522)
T cd07123         425 YVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSP  504 (522)
T ss_pred             EEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCH
Confidence            99984  799999999985 9999999999999999999996  599999999776555568999999999996 99999


Q ss_pred             HHHHHhhhccEEeEeC
Q 023415          226 FSFDVFSHKKAVLSRG  241 (282)
Q Consensus       226 ~~l~~~~~~k~v~~~~  241 (282)
                      +++++|++.|++.+..
T Consensus       505 ~~l~~~~~~k~~~~~~  520 (522)
T cd07123         505 LNLLRWVSPRTIKETF  520 (522)
T ss_pred             HHHHHhcceEEEEEec
Confidence            9999999999987653

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=3.4e-56  Score=422.11  Aligned_cols=234  Identities=32%  Similarity=0.542  Sum_probs=221.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       220 ~~aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  298 (456)
T cd07145         220 SKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDP  298 (456)
T ss_pred             HHHhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCC
Confidence            4688899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +++++||++++.++++++++++++. +++++++||..+. |+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus       299 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  377 (456)
T cd07145         299 LDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEE  377 (456)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHH
Confidence            6 5889999999999999999999986 5789999987643 89999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      ||+++|+++|||+++|||+|.+++.+++.++++|+|+||+.+. ...+.+||||+|.||+|+++|++++++|++.|+|.
T Consensus       378 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         378 AVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTR-FRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence            9999999999999999999999999999999999999998763 23467999999999999999999999999999985

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=7.9e-56  Score=422.80  Aligned_cols=237  Identities=29%  Similarity=0.482  Sum_probs=223.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       248 ~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p  326 (503)
T PLN02467        248 TAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCF-WTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP  326 (503)
T ss_pred             HHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +++++||++++.+++++.+++++++ +|+++++||...   ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~  406 (503)
T PLN02467        327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFST  406 (503)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCC
Confidence            6 5789999999999999999999986 578999998753   2588999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      .+|||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+
T Consensus       407 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~  484 (503)
T PLN02467        407 EDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQP--CFCQAPWGGIKRSGFGRELGEWGLENYLSVKQ  484 (503)
T ss_pred             HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhCeEE
Confidence            9999999999999999999999999999999999999999998653  45679999999999999999999999999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      +....
T Consensus       485 i~~~~  489 (503)
T PLN02467        485 VTKYI  489 (503)
T ss_pred             EEEec
Confidence            98863

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=6.4e-56  Score=419.92  Aligned_cols=236  Identities=27%  Similarity=0.452  Sum_probs=222.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       214 ~~aa~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p  292 (453)
T cd07115         214 QGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIF-YNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDP  292 (453)
T ss_pred             HHHhhcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++|+++. .|+++++||..+. .|+|++|||+.++++++++++||+||||++|++|+|.|
T Consensus       293 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~  372 (453)
T cd07115         293 LDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEE  372 (453)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHH
Confidence            6 6889999999999999999999986 5679999987643 58899999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+.+++++.++++|+|+||+..  ...+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       373 eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~--~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~  450 (453)
T cd07115         373 EALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYN--RFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVW  450 (453)
T ss_pred             HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCC--CCCCCCCCCCcccccCCcCchHHHHHHhhceEEEE
Confidence            9999999999999999999999999999999999999999854  35678999999999999999999999999999987


Q ss_pred             Ee
Q 023415          239 SR  240 (282)
Q Consensus       239 ~~  240 (282)
                      ++
T Consensus       451 ~~  452 (453)
T cd07115         451 VN  452 (453)
T ss_pred             Ee
Confidence            53

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=4.7e-56  Score=421.16  Aligned_cols=234  Identities=25%  Similarity=0.409  Sum_probs=222.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       220 ~~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~-~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  298 (459)
T cd07089         220 AQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCM-HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDP  298 (459)
T ss_pred             HHHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-HhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +++++||++++.+++++++++++++ +|+++++||....   .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       299 ~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~  378 (459)
T cd07089         299 ADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDD  378 (459)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCC
Confidence            6 5789999999999999999999886 5789999997643   589999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +||||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+.|+
T Consensus       379 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~  456 (459)
T cd07089         379 DDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKS  456 (459)
T ss_pred             HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeE
Confidence            9999999999999999999999999999999999999999998763  55778999999999999999999999999998


Q ss_pred             Ee
Q 023415          237 VL  238 (282)
Q Consensus       237 v~  238 (282)
                      |.
T Consensus       457 v~  458 (459)
T cd07089         457 IA  458 (459)
T ss_pred             Ee
Confidence            76

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=7.2e-56  Score=425.20  Aligned_cols=248  Identities=22%  Similarity=0.368  Sum_probs=225.9

Q ss_pred             hhhhhcCCc------EEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415            2 AAAAKHLTP------VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~~~~------~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~   75 (282)
                      ++|+++++|      +++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus       266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  344 (533)
T TIGR01236       266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAF-EYQGQKCSAASRLYVPHSVWPRFKDELLAELAE  344 (533)
T ss_pred             HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence            457788874      9999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             ccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-c--CeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceee
Q 023415           76 FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-S--GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLP  150 (282)
Q Consensus        76 ~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~-~--~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~  150 (282)
                      +++|+|. +.+++||++++.+++++.++++++.+ |  +++++||..+ ..|+|++|||+.+++++|++++||+||||++
T Consensus       345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~  424 (533)
T TIGR01236       345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT  424 (533)
T ss_pred             CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence            9999996 57899999999999999999999875 3  5999998764 3589999999999999999999999999999


Q ss_pred             EEeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--cceEEECCCCcccCCCCCCcccCCCCCCC-Ccch
Q 023415          151 ILTVDK--IEDSFDII-NSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHG  224 (282)
Q Consensus       151 v~~~~~--~~eai~~~-n~~~~gL~a~i~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g  224 (282)
                      |++|+|  ++|||+++ |+++|||+++|||+|.+++.+++++++  +|.|+||+..++...+.+||||+|.||+| +++|
T Consensus       425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g  504 (533)
T TIGR01236       425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGG  504 (533)
T ss_pred             EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCC
Confidence            999998  59999999 889999999999999999999999977  99999998776655678999999999998 8999


Q ss_pred             HHHHHHhhhccEEeEeCCCCCCCCcCC
Q 023415          225 KFSFDVFSHKKAVLSRGFIGDVPVRYP  251 (282)
Q Consensus       225 ~~~l~~~~~~k~v~~~~~~~~~~~~~~  251 (282)
                      .+++++|++.|++.... ..+..+.||
T Consensus       505 ~~~l~~f~~~k~v~~~~-~~~~~~~~~  530 (533)
T TIGR01236       505 PLNLLRWTSARSIKETF-VPLTDWSYP  530 (533)
T ss_pred             HHHHHHhcceEEEEEEc-cccccccCc
Confidence            99999999999988775 223344444

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=6.1e-56  Score=423.51  Aligned_cols=237  Identities=21%  Similarity=0.354  Sum_probs=221.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       254 ~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p  332 (508)
T PLN02315        254 QTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAV-GTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDP  332 (508)
T ss_pred             HHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||+++..+++++++++++++ +|+++++||.. +..|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus       333 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~d  411 (508)
T PLN02315        333 LEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLE  411 (508)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHH
Confidence            6 5789999999999999999999996 57899999975 336899999999 599999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHh--hcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVE--TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~--~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      |||+++|+++|||+++|||+|.++++++++  ++++|.|+||+.... ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus       412 eai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~  490 (508)
T PLN02315        412 EAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRST  490 (508)
T ss_pred             HHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCC-CCCCCCCCccccccCCccchHHHHHHHhhEEE
Confidence            999999999999999999999999999985  799999999986532 34678999999999999999999999999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      |++..
T Consensus       491 v~~~~  495 (508)
T PLN02315        491 CTINY  495 (508)
T ss_pred             EEEec
Confidence            88763

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=7.1e-56  Score=418.51  Aligned_cols=233  Identities=26%  Similarity=0.433  Sum_probs=220.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus       207 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  285 (443)
T cd07152         207 EAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAF-LHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDP  285 (443)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +.+++||++++.+++++.++++++. .|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus       286 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e  363 (443)
T cd07152         286 ATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEE  363 (443)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHH
Confidence            5 5789999999999999999999986 57899999875  488999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEe
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~  238 (282)
                      ||+++|+++|||+++|||+|.+++.++++++++|.|+||++..+ ..+.+||||+|.||+| +.+|++++++|++.|+++
T Consensus       364 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         364 AVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             HHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            99999999999999999999999999999999999999997764 3578999999999999 778999999999999875

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=8.2e-56  Score=418.99  Aligned_cols=234  Identities=22%  Similarity=0.410  Sum_probs=222.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.|++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       214 ~~a~~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p  292 (450)
T cd07092         214 RAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDP  292 (450)
T ss_pred             HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCC
Confidence            4677899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +.+++||++++.++++++++++++.+++++++||... ..|+|++|||+.++++++++++||+||||++|++|+|.||
T Consensus       293 ~~~~~~~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~de  372 (450)
T cd07092         293 DDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDE  372 (450)
T ss_pred             CCCCCccCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHH
Confidence            6 6789999999999999999999888788999999754 3689999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      ||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       373 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         373 AIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence            9999999999999999999999999999999999999998764  4578999999999999999999999999999975

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=7.7e-56  Score=421.25  Aligned_cols=233  Identities=25%  Similarity=0.453  Sum_probs=220.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +++++++||+++|+|||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       233 ~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p  311 (471)
T cd07139         233 AVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASL-MNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDP  311 (471)
T ss_pred             HHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||..+.   .++|++|||+.++++++++++||+||||++|++|+|
T Consensus       312 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~  391 (471)
T cd07139         312 LDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDD  391 (471)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCC
Confidence            6 5789999999999999999999886 5779999987533   488999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +||||+++|+++|||+++|||+|.+++.++++++++|.|+||++.   ..+.+||||+|.||+|+++|++++++||+.|+
T Consensus       392 ~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~  468 (471)
T cd07139         392 EDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKS  468 (471)
T ss_pred             HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeE
Confidence            999999999999999999999999999999999999999999865   35779999999999999999999999999999


Q ss_pred             Ee
Q 023415          237 VL  238 (282)
Q Consensus       237 v~  238 (282)
                      |+
T Consensus       469 i~  470 (471)
T cd07139         469 IY  470 (471)
T ss_pred             Ee
Confidence            85

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=8.2e-56  Score=418.98  Aligned_cols=234  Identities=28%  Similarity=0.504  Sum_probs=222.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       216 ~~aa~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p  294 (454)
T cd07118         216 AAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDP  294 (454)
T ss_pred             HHHHhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCC
Confidence            4677899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC--CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +.+++||++++.++++++++|++++ +|+++++||..++  .|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus       295 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~  374 (454)
T cd07118         295 LDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTV  374 (454)
T ss_pred             CCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCH
Confidence            5 5789999999999999999999986 5779999998653  6899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+.|++
T Consensus       375 ~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~  452 (454)
T cd07118         375 DEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTV  452 (454)
T ss_pred             HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEE
Confidence            999999999999999999999999999999999999999999764  457899999999999999999999999999987


Q ss_pred             e
Q 023415          238 L  238 (282)
Q Consensus       238 ~  238 (282)
                      .
T Consensus       453 ~  453 (454)
T cd07118         453 H  453 (454)
T ss_pred             e
Confidence            5

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=1.5e-55  Score=419.48  Aligned_cols=236  Identities=30%  Similarity=0.482  Sum_probs=221.6

Q ss_pred             hhhhh-cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~-~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++ ++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus       241 ~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~-~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  319 (481)
T cd07143         241 EAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGD  319 (481)
T ss_pred             HHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence            34553 89999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +++++||++++.++++++++|+++. .++++++||..+ ..|+|+.|||+.++++++++++||+||||++|++|+|.
T Consensus       320 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~  399 (481)
T cd07143         320 PFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE  399 (481)
T ss_pred             CCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCH
Confidence            85 6889999999999999999999886 578999999764 36889999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|++
T Consensus       400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i  477 (481)
T cd07143         400 EEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAV  477 (481)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEE
Confidence            999999999999999999999999999999999999999998753  567799999999999999999999999999998


Q ss_pred             eEe
Q 023415          238 LSR  240 (282)
Q Consensus       238 ~~~  240 (282)
                      .++
T Consensus       478 ~~~  480 (481)
T cd07143         478 HIN  480 (481)
T ss_pred             EEe
Confidence            753

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=1.3e-55  Score=417.75  Aligned_cols=234  Identities=24%  Similarity=0.397  Sum_probs=221.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|+++++|+++|||||||+||++|||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       212 ~~a~~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p  290 (452)
T cd07102         212 RAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP  290 (452)
T ss_pred             HHHHhcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc----CCCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~----~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +.+++||++++.++++++++++++. +++++++||..    +..|+|++|||+.+++++|+++++|+||||++|++|+
T Consensus       291 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~  370 (452)
T cd07102         291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVK  370 (452)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeC
Confidence            5 6789999999999999999999885 57899999864    2368999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |++|||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|
T Consensus       371 ~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k  448 (452)
T cd07102         371 SDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPK  448 (452)
T ss_pred             CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhcee
Confidence            99999999999999999999999999999999999999999998763  4567899999999999999999999999999


Q ss_pred             EEe
Q 023415          236 AVL  238 (282)
Q Consensus       236 ~v~  238 (282)
                      +++
T Consensus       449 ~~~  451 (452)
T cd07102         449 SYH  451 (452)
T ss_pred             EEe
Confidence            975

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=1.3e-55  Score=422.60  Aligned_cols=234  Identities=22%  Similarity=0.397  Sum_probs=220.3

Q ss_pred             hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CC
Q 023415            6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ES   84 (282)
Q Consensus         6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~   84 (282)
                      +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. +.
T Consensus       274 ~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~  352 (511)
T TIGR01237       274 KHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAF-GFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPS  352 (511)
T ss_pred             cccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            589999999999999999999999999999999999 9999999999999999999999999999999999999985 68


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHH
Q 023415           85 KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI  163 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~  163 (282)
                      +++||++++.++++++++++++.+.+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus       353 ~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~  432 (511)
T TIGR01237       353 TQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEI  432 (511)
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHH
Confidence            899999999999999999999876668999886533 5899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEeEe
Q 023415          164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v~~~  240 (282)
                      +|+++|||+++|||+|.+++.+++.++++|+|+||+...+...+.+||||+|.||+|+ .+|++++++||+.|+|+.+
T Consensus       433 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       433 ANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             HhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence            9999999999999999999999999999999999998765555678999999999995 6899999999999998764

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1.2e-55  Score=417.96  Aligned_cols=232  Identities=24%  Similarity=0.461  Sum_probs=217.7

Q ss_pred             hhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC
Q 023415            3 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL   82 (282)
Q Consensus         3 ~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~   82 (282)
                      +++. .+|+++|||||||+||++|||+|.|++.|++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus       221 ~aa~-~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~  298 (455)
T cd07148         221 KLAP-GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT  298 (455)
T ss_pred             Hhhc-CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCC
Confidence            3444 5999999999999999999999999999999999 9999999999999999999999999999999999999996


Q ss_pred             -CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           83 -ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        83 -~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                       +.+++||++++.++++++++++++. +|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus       299 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea  377 (455)
T cd07148         299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEA  377 (455)
T ss_pred             CCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHH
Confidence             6889999999999999999999986 577999998764 4789999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+++|+++|||+++|||+|.+++.++++++++|.|+||++.. ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       378 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         378 IAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             HHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence            999999999999999999999999999999999999998753 34457899999999999999999999999999885

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=1.4e-55  Score=414.91  Aligned_cols=236  Identities=47%  Similarity=0.816  Sum_probs=222.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|+++++|+++|||||||+||++|||++.|++.+++++| .++||.|+++++||||++++|+|+++|+++++++..++|
T Consensus       194 ~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~  272 (433)
T cd07134         194 AAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDA  272 (433)
T ss_pred             HHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhh-cCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999988875


Q ss_pred             --CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 --LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 --~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                        ++++++||++++.++++++++++++. +++++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus       273 ~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~  352 (433)
T cd07134         273 ARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLD  352 (433)
T ss_pred             CcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHH
Confidence              46889999999999999999999885 678999999876668999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+|+++|+++|||+++|||+|.+.+++++.++++|.|+||+.+.+...+.+||||+|.||+|+++|++++++||+.|++.
T Consensus       353 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         353 EVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            99999999999999999999999999999999999999999776545678999999999999999999999999999875

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=1.3e-55  Score=420.15  Aligned_cols=234  Identities=29%  Similarity=0.456  Sum_probs=221.0

Q ss_pred             hhhhh-cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~-~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+. ++||+++|||||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus       238 ~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~  316 (476)
T cd07091         238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGD  316 (476)
T ss_pred             HHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCC
Confidence            45666 89999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +.+++||++++.+++++.++++++. +|+++++||..+ ..|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus       317 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~  396 (476)
T cd07091         317 PFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTE  396 (476)
T ss_pred             CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCH
Confidence            95 6899999999999999999999886 577999998764 36889999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +||++++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|++
T Consensus       397 ~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~  474 (476)
T cd07091         397 DEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV  474 (476)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEE
Confidence            999999999999999999999999999999999999999998643  567899999999999999999999999999987


Q ss_pred             e
Q 023415          238 L  238 (282)
Q Consensus       238 ~  238 (282)
                      .
T Consensus       475 ~  475 (476)
T cd07091         475 T  475 (476)
T ss_pred             e
Confidence            5

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=1.2e-55  Score=417.84  Aligned_cols=233  Identities=26%  Similarity=0.487  Sum_probs=221.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       216 ~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  294 (451)
T cd07150         216 EKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDP  294 (451)
T ss_pred             HHHhhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus       295 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e  372 (451)
T cd07150         295 RDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEE  372 (451)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHH
Confidence            6 5789999999999999999999986 57899999864  488999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      ||+++|+++|||+++|||+|.+++++++.++++|.|+||++..+ ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus       373 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         373 ALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence            99999999999999999999999999999999999999998764 4577999999999999999999999999999875

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-55  Score=420.62  Aligned_cols=231  Identities=23%  Similarity=0.389  Sum_probs=218.1

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      .++|+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|.++++
T Consensus       257 ~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  335 (496)
T PLN00412        257 GMVPLQMELGGKDACIVLEDADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCD  335 (496)
T ss_pred             CCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCC
Confidence            38999999999999999999999999999999999 99999999999999999999999999999999999999977889


Q ss_pred             ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                      +||++++.+++++.+++++++ .|+++++||..  .|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|
T Consensus       336 ~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an  413 (496)
T PLN00412        336 ITPVVSESSANFIEGLVMDAKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN  413 (496)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHh
Confidence            999999999999999999986 57788887643  689999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|||+++|||+|.+++.++++++++|.|+||++.. ...+.+||||+|.||+|+++|++++++||+.|+++++.
T Consensus       414 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  488 (496)
T PLN00412        414 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL  488 (496)
T ss_pred             CCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence            9999999999999999999999999999999999764 24457999999999999999999999999999998763

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=2.7e-55  Score=418.20  Aligned_cols=237  Identities=26%  Similarity=0.447  Sum_probs=222.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus       232 ~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  310 (478)
T cd07131         232 ETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAF-GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDG  310 (478)
T ss_pred             HHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.+++++++++++++ +|+++++||...     ..|+|++|||+.+++++++++++|+||||++|++|
T Consensus       311 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~  390 (478)
T cd07131         311 LDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEV  390 (478)
T ss_pred             CCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEe
Confidence            6 5789999999999999999999986 578999998652     35889999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhh
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSH  233 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~  233 (282)
                      +|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+| +++|.+++++|++
T Consensus       391 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~  469 (478)
T cd07131         391 SSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTALDAFTE  469 (478)
T ss_pred             CCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999997654 4568999999999999 7789999999999


Q ss_pred             ccEEeEe
Q 023415          234 KKAVLSR  240 (282)
Q Consensus       234 ~k~v~~~  240 (282)
                      .|+|+++
T Consensus       470 ~k~i~~~  476 (478)
T cd07131         470 WKAVYVD  476 (478)
T ss_pred             eEEEEEe
Confidence            9999864

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=2.2e-55  Score=417.91  Aligned_cols=234  Identities=25%  Similarity=0.486  Sum_probs=221.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       230 ~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  308 (468)
T cd07088         230 EAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRI-INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDP  308 (468)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHh-cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC--CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++++++. +|+++++||..++  .|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus       309 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~  388 (468)
T cd07088         309 FDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSL  388 (468)
T ss_pred             CCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCH
Confidence            6 5789999999999999999999986 5789999997643  5899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.+++++++.++++|.|+||++..+  .+..||||+|.||+|+++|++++++||+.|+|
T Consensus       389 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v  466 (468)
T cd07088         389 DEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFE--AMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV  466 (468)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEE
Confidence            9999999999999999999999999999999999999999997653  34569999999999999999999999999987


Q ss_pred             e
Q 023415          238 L  238 (282)
Q Consensus       238 ~  238 (282)
                      .
T Consensus       467 ~  467 (468)
T cd07088         467 Y  467 (468)
T ss_pred             e
Confidence            5

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=1.8e-55  Score=417.25  Aligned_cols=234  Identities=27%  Similarity=0.450  Sum_probs=219.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHh-cccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~-~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++++ | .|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus       213 ~~aa~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~  291 (457)
T cd07108         213 RAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRF-TRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGD  291 (457)
T ss_pred             HHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHh-hcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCC
Confidence            457789999999999999999999999999999999995 9 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEE
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~  152 (282)
                      |. +++++||++++.++++++++++++.  +|+++++||..+     ..|+|++|||+.+++++|++++||+||||++|+
T Consensus       292 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~  371 (457)
T cd07108         292 PLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAI  371 (457)
T ss_pred             CCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEee
Confidence            86 6789999999999999999999885  478999999753     358999999999999999999999999999999


Q ss_pred             eeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHH-HHHh
Q 023415          153 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFS-FDVF  231 (282)
Q Consensus       153 ~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~-l~~~  231 (282)
                      +|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.++ +++|
T Consensus       372 ~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f  449 (457)
T cd07108         372 PWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHF  449 (457)
T ss_pred             cCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHh
Confidence            99999999999999999999999999999999999999999999999864  35779999999999999999976 6999


Q ss_pred             hhccEEe
Q 023415          232 SHKKAVL  238 (282)
Q Consensus       232 ~~~k~v~  238 (282)
                      |+.|+++
T Consensus       450 ~~~k~i~  456 (457)
T cd07108         450 TQKKTVN  456 (457)
T ss_pred             hceEEEe
Confidence            9999875

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=2.5e-55  Score=417.07  Aligned_cols=238  Identities=32%  Similarity=0.553  Sum_probs=224.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++.++++|+|
T Consensus       220 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p  298 (465)
T cd07098         220 AAAAESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTF-QSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPP  298 (465)
T ss_pred             HHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.++++++++++++. .|+++++||...     ..|+|++|||+.+++++|+++++|+||||++|++|
T Consensus       299 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  378 (465)
T cd07098         299 LDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKA  378 (465)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEe
Confidence            5 6899999999999999999999886 578999998642     24899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|.+||++++|+++|||+++|||+|.+++.+++.++++|.|+||+..++...+.+||||+|.||+|+++|++++++|++.
T Consensus       379 ~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~  458 (465)
T cd07098         379 SDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNP  458 (465)
T ss_pred             CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhhee
Confidence            99999999999999999999999999999999999999999999976555567899999999999999999999999999


Q ss_pred             cEEeEe
Q 023415          235 KAVLSR  240 (282)
Q Consensus       235 k~v~~~  240 (282)
                      |++.++
T Consensus       459 k~~~~~  464 (465)
T cd07098         459 KSVTED  464 (465)
T ss_pred             EEEEEe
Confidence            999764

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-55  Score=421.38  Aligned_cols=233  Identities=26%  Similarity=0.430  Sum_probs=220.1

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      ++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|.+..+
T Consensus       279 ~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~  357 (514)
T PRK03137        279 WLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAF-GFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAY  357 (514)
T ss_pred             ccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCccC
Confidence            79999999999999999999999999999999999 99999999999999999999999999999999999999975449


Q ss_pred             ccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                      +||++++.++++++++++++.+.+++++||..++ .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|
T Consensus       358 ~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N  437 (514)
T PRK03137        358 MGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIAN  437 (514)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence            9999999999999999999987789999987543 589999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~  240 (282)
                      +++|||+++|||+|.++++++++++++|.|+||+..++...+.+||||+|.||+| +++|.+++++||+.|+|...
T Consensus       438 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~  513 (514)
T PRK03137        438 NTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM  513 (514)
T ss_pred             CCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence            9999999999999999999999999999999999776655577999999999999 68899999999999998754

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=2.4e-55  Score=416.11  Aligned_cols=228  Identities=29%  Similarity=0.572  Sum_probs=217.1

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      +++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|. +++
T Consensus       223 ~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~  301 (453)
T cd07094         223 GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDT  301 (453)
T ss_pred             CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence            78999999999999999999999999999999999 9999999999999999999999999999999999999996 578


Q ss_pred             cccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                      ++||++++.++++++++++++. +|+++++||..  .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++
T Consensus       302 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~  379 (453)
T cd07094         302 DVGPLISEEAAERVERWVEEAVEAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIA  379 (453)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHH
Confidence            9999999999999999999986 57799999864  47899999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+++|||++||||+|.+++.++++++++|+|+||++.. ...+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       380 n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         380 NSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSA-FRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             hCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCC-CCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            99999999999999999999999999999999999864 34578999999999999999999999999999986

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=3e-55  Score=415.79  Aligned_cols=234  Identities=26%  Similarity=0.496  Sum_probs=221.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       216 ~~aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  294 (457)
T cd07114         216 RAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDP  294 (457)
T ss_pred             HHHHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-----CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +++++||++++.++++++++++++. +|+++++||....     .|+|++|||+.++++++++++||+||||++|++|
T Consensus       295 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  374 (457)
T cd07114         295 LDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPF  374 (457)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEecc
Confidence            6 6899999999999999999999886 5779999987532     4789999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|.||||+++|+++|||+++|||+|.+.+++++.++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++|++.
T Consensus       375 ~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~  452 (457)
T cd07114         375 DDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQT  452 (457)
T ss_pred             CCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhce
Confidence            999999999999999999999999999999999999999999998653  457899999999999999999999999999


Q ss_pred             cEEe
Q 023415          235 KAVL  238 (282)
Q Consensus       235 k~v~  238 (282)
                      |+++
T Consensus       453 k~~~  456 (457)
T cd07114         453 KSVW  456 (457)
T ss_pred             eEEe
Confidence            9875

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=3.6e-55  Score=412.54  Aligned_cols=233  Identities=28%  Similarity=0.508  Sum_probs=221.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       196 ~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~  274 (431)
T cd07104         196 ELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF-LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDP  274 (431)
T ss_pred             HHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +.+++||++++.+++++.+++++++ +|+++++||..  .|+|++|||+.++++++++++||+||||++|++|+|+||
T Consensus       275 ~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~e  352 (431)
T cd07104         275 RDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEE  352 (431)
T ss_pred             CCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHH
Confidence            6 5789999999999999999999886 57899999864  588999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      ||+++|+++|||+++|||+|.+++.++++++++|.|+||+++.+ ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       353 ai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         353 AVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             HHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            99999999999999999999999999999999999999998765 3578999999999999999999999999999975

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=3.5e-55  Score=416.23  Aligned_cols=230  Identities=22%  Similarity=0.387  Sum_probs=216.0

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      .++|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|. +++
T Consensus       239 ~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  317 (472)
T TIGR03250       239 GYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSV  317 (472)
T ss_pred             cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-HhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            37999999999999999999999999999999999 9999999999999999999999999999999999999985 678


Q ss_pred             cccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                      ++||++++.++++++++++++. +|+++++||..  .|+|++|||+++++++|++++||+||||++|++|+|.+||++++
T Consensus       318 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a  395 (472)
T TIGR03250       318 DMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRIS  395 (472)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence            9999999999999999999986 57899999865  58999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+++|||+++|||+|.+++.++++++++|.|+||+.+.+ ..+.+||||+|.||+| +.+|.+++++|++.|+++++
T Consensus       396 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~  471 (472)
T TIGR03250       396 NSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP  471 (472)
T ss_pred             hCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCC-CCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence            999999999999999999999999999999999987643 3456899999999999 56778999999999998765

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-55  Score=417.52  Aligned_cols=235  Identities=23%  Similarity=0.439  Sum_probs=221.3

Q ss_pred             hhh-hcCCcEEEeCCCCCceEEcCCC-CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            3 AAA-KHLTPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         3 ~aa-~~~~~~~lElgG~np~iV~~dA-Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      .|+ +++||+++|||||||+||++|+ |++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus       255 ~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~  333 (494)
T PRK09847        255 DAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGH  333 (494)
T ss_pred             HhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence            455 5899999999999999999997 99999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      |. +++++||++++.++++++++|+++++.+++++||..+..+.|++|||+.++++++++++||+||||++|++|+|++|
T Consensus       334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e  413 (494)
T PRK09847        334 PLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ  413 (494)
T ss_pred             CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence            86 68899999999999999999999976559999987655678999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      ||+++|+++|||+++|||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|+|.+
T Consensus       414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~  491 (494)
T PRK09847        414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYND--GDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWI  491 (494)
T ss_pred             HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCCcccccCccchHHHHHHhhceEEEEE
Confidence            9999999999999999999999999999999999999999654  45678999999999999999999999999999876


Q ss_pred             e
Q 023415          240 R  240 (282)
Q Consensus       240 ~  240 (282)
                      .
T Consensus       492 ~  492 (494)
T PRK09847        492 S  492 (494)
T ss_pred             e
Confidence            4

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=3.5e-55  Score=412.51  Aligned_cols=231  Identities=35%  Similarity=0.575  Sum_probs=219.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++.++++|  
T Consensus       198 ~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g--  274 (432)
T cd07105         198 ETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAF-LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG--  274 (432)
T ss_pred             HHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC--
Confidence            5678999999999999999999999999999999999999 9999999999999999999999999999999999887  


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                        ++++||++++.+++++++++++++ +|+++++||..+  ..|+|+.|||+.+++++|++++||+||||++|++|+|.+
T Consensus       275 --~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~d  352 (432)
T cd07105         275 --PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEE  352 (432)
T ss_pred             --CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHH
Confidence              579999999999999999999886 577999998764  358999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      ||++++|+++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       353 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         353 EAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            999999999999999999999999999999999999999998754 3578999999999999999999999999999986

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=3.6e-55  Score=415.40  Aligned_cols=234  Identities=25%  Similarity=0.439  Sum_probs=220.5

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCC-CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK   79 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dA-Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g   79 (282)
                      +.|+ .++||+++|+|||||+||++|| |++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus       221 ~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g  299 (462)
T cd07112         221 EYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPG  299 (462)
T ss_pred             HHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHH-hccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcC
Confidence            3456 4899999999999999999999 99999999999999 9999999999999999999999999999999999999


Q ss_pred             CCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           80 NPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      +|. +++++||++++.++++++++|++++ .|+++++||....   .|+|++|||+.++++++++++||+||||++|++|
T Consensus       300 ~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~  379 (462)
T cd07112         300 DPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITF  379 (462)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEe
Confidence            996 5899999999999999999999987 5789999987542   4889999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|.+|||+++|+++|||+++|||+|.+.+.++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.
T Consensus       380 ~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~  457 (462)
T cd07112         380 DSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTEL  457 (462)
T ss_pred             CCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhce
Confidence            999999999999999999999999999999999999999999998653  457899999999999999999999999999


Q ss_pred             cEEe
Q 023415          235 KAVL  238 (282)
Q Consensus       235 k~v~  238 (282)
                      |+++
T Consensus       458 k~i~  461 (462)
T cd07112         458 KTTW  461 (462)
T ss_pred             eEEE
Confidence            9875

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=4.9e-55  Score=416.22  Aligned_cols=234  Identities=25%  Similarity=0.390  Sum_probs=217.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCC------CCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSG------INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~d------ADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~   75 (282)
                      +.|++++||+++|||||||+||++|      ||++.|++.++++ + +|+||.|++++|||||++++|+|+++|++++++
T Consensus       232 ~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~-~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  309 (479)
T cd07116         232 QYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMF-A-LNQGEVCTCPSRALIQESIYDRFMERALERVKA  309 (479)
T ss_pred             HHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHH-H-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence            4577899999999999999999998      7999999999985 6 689999999999999999999999999999999


Q ss_pred             ccCCCCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccce
Q 023415           76 FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPL  148 (282)
Q Consensus        76 ~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPv  148 (282)
                      ++.|+|. +.+.+||++++.++++++++++++. +|+++++||...     ..|+|+.||++.+++ +|++++||+||||
T Consensus       310 l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPV  388 (479)
T cd07116         310 IKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPV  388 (479)
T ss_pred             cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCce
Confidence            9999986 6789999999999999999999986 577999998753     258899999999875 9999999999999


Q ss_pred             eeEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHH
Q 023415          149 LPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF  228 (282)
Q Consensus       149 l~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l  228 (282)
                      ++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++
T Consensus       389 l~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l  466 (479)
T cd07116         389 LAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMML  466 (479)
T ss_pred             EEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHH
Confidence            999999999999999999999999999999999999999999999999998653  456799999999999999999999


Q ss_pred             HHhhhccEEeEe
Q 023415          229 DVFSHKKAVLSR  240 (282)
Q Consensus       229 ~~~~~~k~v~~~  240 (282)
                      ++|++.|++.++
T Consensus       467 ~~~~~~k~~~~~  478 (479)
T cd07116         467 DHYQQTKNLLVS  478 (479)
T ss_pred             HHhhceEEEEEe
Confidence            999999998763

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=3.6e-55  Score=416.16  Aligned_cols=231  Identities=27%  Similarity=0.466  Sum_probs=217.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus       230 ~~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  308 (467)
T TIGR01804       230 AAAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNF-FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDG  308 (467)
T ss_pred             HHHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-----CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +++++||++++.++++++++++++. .|+++++||....     .|+|++|||+.+++++|++++||+||||++|++|
T Consensus       309 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~  388 (467)
T TIGR01804       309 FDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTF  388 (467)
T ss_pred             CCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEec
Confidence            5 6889999999999999999999886 5779999987532     4789999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.
T Consensus       389 ~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~  466 (467)
T TIGR01804       389 SSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEYTEV  466 (467)
T ss_pred             CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999998654  456789999999999999999999999987


Q ss_pred             c
Q 023415          235 K  235 (282)
Q Consensus       235 k  235 (282)
                      |
T Consensus       467 ~  467 (467)
T TIGR01804       467 K  467 (467)
T ss_pred             C
Confidence            5

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=5.2e-55  Score=415.27  Aligned_cols=232  Identities=28%  Similarity=0.452  Sum_probs=218.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       243 ~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p  321 (480)
T cd07111         243 RATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDP  321 (480)
T ss_pred             HHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHH-hcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4578899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.+++++++++++++ +|++++.||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus       322 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~d  401 (480)
T cd07111         322 LDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAK  401 (480)
T ss_pred             CCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHH
Confidence            6 6889999999999999999999986 57788888864 3468999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      |||+++|+++|||+++|||+|.+++.+++.++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus       402 eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         402 EAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999998754  45678999999999999999999999999885

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=6.7e-55  Score=414.21  Aligned_cols=233  Identities=27%  Similarity=0.464  Sum_probs=219.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|+.++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       227 ~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  305 (466)
T cd07138         227 EAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACF-ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDP  305 (466)
T ss_pred             HHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence            4578889999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC----CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +++++||++++.++++++++++++. +|+++++||...    ..|+|++|||+.++++++++++||+||||++|++|+
T Consensus       306 ~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~  385 (466)
T cd07138         306 RDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYD  385 (466)
T ss_pred             CCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccC
Confidence            6 6899999999999999999999986 578999998632    258999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |.+|||+++|+++|||+++|||+|.+++.++++++++|.|+||+..   ..+.+||||+|.||+|+++|++++++|++.|
T Consensus       386 ~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k  462 (466)
T cd07138         386 DEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVK  462 (466)
T ss_pred             CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhccee
Confidence            9999999999999999999999999999999999999999999853   3578999999999999999999999999999


Q ss_pred             EEe
Q 023415          236 AVL  238 (282)
Q Consensus       236 ~v~  238 (282)
                      +|+
T Consensus       463 ~v~  465 (466)
T cd07138         463 SIQ  465 (466)
T ss_pred             EEe
Confidence            875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=9.4e-55  Score=415.97  Aligned_cols=238  Identities=25%  Similarity=0.434  Sum_probs=222.8

Q ss_pred             hhhhhcC------CcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415            2 AAAAKHL------TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~~------~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~   75 (282)
                      ++|++++      +|+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++
T Consensus       251 ~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  329 (500)
T cd07083         251 EAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAF-GFQGQKCSAASRLILTQGAYEPVLERLLKRAER  329 (500)
T ss_pred             HHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc
Confidence            3566665      999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             ccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           76 FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        76 ~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      +++|+|. +.+++||++++.+++++++++++++..+++++||..++ .|+|++|||+.+++++|++++||+||||++|++
T Consensus       330 ~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~  409 (500)
T cd07083         330 LSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIR  409 (500)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEE
Confidence            9999986 57899999999999999999999987779999987643 588999999999999999999999999999999


Q ss_pred             eC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHH
Q 023415          154 VD--KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDV  230 (282)
Q Consensus       154 ~~--~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~  230 (282)
                      |+  |++|||+++|+++|||+++|||+|.+++.++++++++|+|+||+...+...+.+||||+|.||+| +.+|.+++++
T Consensus       410 ~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~  489 (500)
T cd07083         410 YKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRR  489 (500)
T ss_pred             eCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHH
Confidence            99  99999999999999999999999999999999999999999999876655567999999999999 5789999999


Q ss_pred             hhhccEEeEe
Q 023415          231 FSHKKAVLSR  240 (282)
Q Consensus       231 ~~~~k~v~~~  240 (282)
                      |++.|+++.+
T Consensus       490 ~~~~k~~~~~  499 (500)
T cd07083         490 FLEMKAVAER  499 (500)
T ss_pred             hhheeEEEEc
Confidence            9999998754

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=1.1e-54  Score=411.50  Aligned_cols=228  Identities=26%  Similarity=0.537  Sum_probs=215.9

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD   86 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~   86 (282)
                      .+|+++|||||||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +.++
T Consensus       223 ~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~  301 (452)
T cd07147         223 KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATD  301 (452)
T ss_pred             cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            5799999999999999999999999999999999 9999999999999999999999999999999999999985 5789


Q ss_pred             ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                      +||++++.++++++++++++. +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       302 ~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n  379 (452)
T cd07147         302 VGPMISESEAERVEGWVNEAVDAGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVN  379 (452)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHh
Confidence            999999999999999999986 57899999875  488999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      +++|||+++|||+|.++++++++++++|.|+||+.+. ...+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus       380 ~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         380 DSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPT-FRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             CCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCC-CCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            9999999999999999999999999999999999763 234679999999999999999999999999999864

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1.5e-54  Score=416.04  Aligned_cols=232  Identities=22%  Similarity=0.339  Sum_probs=218.8

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      .++|+++|||||||+||++|||++.|++.|++++| .|+||.|+|++|||||++++|+|+++|+++++++++|+|. +++
T Consensus       272 ~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  350 (518)
T cd07125         272 PILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAF-GSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLST  350 (518)
T ss_pred             CCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCC
Confidence            38999999999999999999999999999999999 9999999999999999999999999999999999999986 579


Q ss_pred             cccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeC--CHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFD  162 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~  162 (282)
                      ++||++++.++++++++++++..++++++||..+. .|+|++|||+.++  +|++++||+||||++|++|+  |++|||+
T Consensus       351 ~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~  428 (518)
T cd07125         351 DVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIE  428 (518)
T ss_pred             CcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHH
Confidence            99999999999999999999987789999987644 6899999999887  89999999999999999999  9999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEeEeC
Q 023415          163 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       163 ~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v~~~~  241 (282)
                      ++|+++|||+++|||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+ .+|.+++++||+.|+++++.
T Consensus       429 ~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~  508 (518)
T cd07125         429 DINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT  508 (518)
T ss_pred             HHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence            99999999999999999999999999999999999998765556779999999999995 67899999999999998765

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=1.9e-54  Score=413.06  Aligned_cols=234  Identities=18%  Similarity=0.280  Sum_probs=216.5

Q ss_pred             hhhcCCcEEEeCCCCCceEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC
Q 023415            4 AAKHLTPVLLELGGKSPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG   78 (282)
Q Consensus         4 aa~~~~~~~lElgG~np~iV~~dAD-----l~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~   78 (282)
                      ++++++|+++|||||||+||++|||     +|.|++.+++++| .|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus       243 ~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~  321 (513)
T cd07128         243 IVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMT-VKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVV  321 (513)
T ss_pred             hhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHH-HhcCCcccCCceEEEehHHHHHHHHHHHHHHHhccc
Confidence            3589999999999999999999999     9999999999999 999999999999999999999999999999999999


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC--------CCCceecceEEeeCCCC--Ccccccccccc
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPRD--SLIMSEEIFGP  147 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~--------~~g~~~~Ptv~~~~~~~--~~i~~~E~fgP  147 (282)
                      |+|. +.+++||++++.++++++++|+++++++++++||...        ..|+|++|||+.+++++  |.+++||+|||
T Consensus       322 G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGP  401 (513)
T cd07128         322 GDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGP  401 (513)
T ss_pred             CCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCC
Confidence            9985 6889999999999999999999997669999998642        25899999999988874  89999999999


Q ss_pred             eeeEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc--cceEEECCCCc-------ccCCCCCCcccCCCCC
Q 023415          148 LLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV-------HLAVHSLPFGGVQESG  218 (282)
Q Consensus       148 vl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~--~g~v~iN~~~~-------~~~~~~~pfGG~~~SG  218 (282)
                      |++|++|+|++|+|+++|+++|||++||||+|.+++++++++++  +|.|+||+..+       ....+.+||||+|.||
T Consensus       402 Vl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG  481 (513)
T cd07128         402 VATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAG  481 (513)
T ss_pred             eEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCC
Confidence            99999999999999999999999999999999999999999997  99999998642       1234678999999999


Q ss_pred             CCCcc-hHHHHHHhhhccEEe
Q 023415          219 MGAYH-GKFSFDVFSHKKAVL  238 (282)
Q Consensus       219 ~G~~~-g~~~l~~~~~~k~v~  238 (282)
                      +|+++ |.+++++|++.|+|.
T Consensus       482 ~G~~~gg~~~l~~~~~~k~v~  502 (513)
T cd07128         482 GGEELGGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             CCcccccHHHHHHhheeeeee
Confidence            99994 799999999999865

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=2.5e-54  Score=408.96  Aligned_cols=234  Identities=32%  Similarity=0.497  Sum_probs=221.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       214 ~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~  292 (451)
T cd07103         214 AQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKF-RNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNG  292 (451)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999988


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.+++++.+++++++ +|+++++||..+. .|+|++|||+.+++++++++++|+||||++|++|+|++
T Consensus       293 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~  372 (451)
T cd07103         293 LDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTED  372 (451)
T ss_pred             CCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHH
Confidence            5 6789999999999999999999886 5789999987653 68899999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.+.+++++.++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|++.
T Consensus       373 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         373 EVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            99999999999999999999999999999999999999999864  3577999999999999999999999999999875

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=1.9e-54  Score=406.62  Aligned_cols=232  Identities=53%  Similarity=0.917  Sum_probs=219.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++.++++.+++|
T Consensus       194 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~  272 (426)
T cd07087         194 EAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKF-LNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP  272 (426)
T ss_pred             HHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHH-hccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999988888


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      .+.+++||++++.+++++.++++++    ++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus       273 ~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai  348 (426)
T cd07087         273 KESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAI  348 (426)
T ss_pred             ccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHH
Confidence            8889999999999999999999754    889998765568999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      +++|+++|||+++|||+|.+++.++++++++|+|+||+++.+...+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus       349 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         349 EFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             HHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence            99999999999999999999999999999999999999865545678999999999999999999999999999874

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=4.5e-54  Score=407.61  Aligned_cols=234  Identities=27%  Similarity=0.504  Sum_probs=221.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       214 ~~aa~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p  292 (455)
T cd07093         214 RAAAPNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSF-SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDP  292 (455)
T ss_pred             HHHhhcccceEeecCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4577899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-----CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.+++++++++++++ .|+++++||...+     .++|+.|||+.++++++++++||+||||++|++|
T Consensus       293 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  372 (455)
T cd07093         293 LDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPF  372 (455)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEee
Confidence            5 5789999999999999999999886 5789999997542     4889999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|.+|||+++|+.+|||+++|||+|.+.+++++.++++|.|+||+...+  .+.+||||+|.||+|+++|++++++|++.
T Consensus       373 ~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~  450 (455)
T cd07093         373 DDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTEL  450 (455)
T ss_pred             CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCCCchHHHHHHHhce
Confidence            9999999999999999999999999999999999999999999998764  46789999999999999999999999999


Q ss_pred             cEEe
Q 023415          235 KAVL  238 (282)
Q Consensus       235 k~v~  238 (282)
                      |+++
T Consensus       451 k~~~  454 (455)
T cd07093         451 KNVC  454 (455)
T ss_pred             eEEe
Confidence            9875

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=2e-55  Score=417.47  Aligned_cols=234  Identities=34%  Similarity=0.622  Sum_probs=218.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.+++++||+++|+|||||+||++|||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|
T Consensus       223 ~~a~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~  301 (462)
T PF00171_consen  223 KAAAKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAF-FNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDP  301 (462)
T ss_dssp             HHHHTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHH-GGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSST
T ss_pred             hhcccccccccccccccceeeEecccccccccccccchhc-ccccccccccccccccccccchhhhhhhhccccccccCC
Confidence            4567889999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCC----ccCCCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGG----ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg----~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +++++||+++..+++++.++++++. +|+++++||    .....|+|++|||+.+++++|+++++|+||||++|++|+
T Consensus       302 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~  381 (462)
T PF00171_consen  302 LDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYD  381 (462)
T ss_dssp             TSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEES
T ss_pred             ccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccc
Confidence            6 5899999999999999999999996 588999998    335678999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |++||++++|+++|||+++|||+|.++++++++++++|+|+||+++.+.... +||||+|.||+|+++|.+++++|++.|
T Consensus       382 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k  460 (462)
T PF00171_consen  382 DLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIK  460 (462)
T ss_dssp             SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEE
T ss_pred             cchhhhhcccccCCCceeEEecccccccccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999999999998765444 899999999999999999999999999


Q ss_pred             EE
Q 023415          236 AV  237 (282)
Q Consensus       236 ~v  237 (282)
                      +|
T Consensus       461 ~V  462 (462)
T PF00171_consen  461 TV  462 (462)
T ss_dssp             EE
T ss_pred             CC
Confidence            86

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=5.4e-54  Score=420.65  Aligned_cols=237  Identities=19%  Similarity=0.254  Sum_probs=217.8

Q ss_pred             hhhcCCcEEEeCCCCCceEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC
Q 023415            4 AAKHLTPVLLELGGKSPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG   78 (282)
Q Consensus         4 aa~~~~~~~lElgG~np~iV~~dAD-----l~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~   78 (282)
                      ++++++|+++|||||||+||++|||     ++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++
T Consensus       243 aa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v  321 (663)
T TIGR02278       243 VLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELT-IKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVL  321 (663)
T ss_pred             HHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHH-hcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence            4589999999999999999999999     9999999999999 999999999999999999999999999999999999


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCC-cccccccccceeeEEeeC
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDS-LIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~-~i~~~E~fgPvl~v~~~~  155 (282)
                      |+|. +++++||++++.++++++++|+++. +|+++++||..+..|+|++|||+.+++++| .+++||+||||++|++|+
T Consensus       322 G~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~  401 (663)
T TIGR02278       322 GDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYG  401 (663)
T ss_pred             CCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeC
Confidence            9996 5789999999999999999999986 478999999765568999999999998876 799999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ccceEEE-CCCC-----cc-cCCCCCCcccCCCCCCCCc-chH
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVI-NDTA-----VH-LAVHSLPFGGVQESGMGAY-HGK  225 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l--~~g~v~i-N~~~-----~~-~~~~~~pfGG~~~SG~G~~-~g~  225 (282)
                      |.+|||+++|+++|||++||||+|.++++++++++  ++|.|+| |.+.     .+ ...+.+||||+|.||+|++ +|.
T Consensus       402 ~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~  481 (663)
T TIGR02278       402 DRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGL  481 (663)
T ss_pred             CHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchH
Confidence            99999999999999999999999999999999999  8999999 6421     11 2246789999999999999 568


Q ss_pred             HHHHHhhhccEEeEeC
Q 023415          226 FSFDVFSHKKAVLSRG  241 (282)
Q Consensus       226 ~~l~~~~~~k~v~~~~  241 (282)
                      +++++|++.|+|..-+
T Consensus       482 ~~l~~f~~~k~v~~~~  497 (663)
T TIGR02278       482 RSVKHYMQRTAIQGSP  497 (663)
T ss_pred             HHHHHhceeEEEEcCH
Confidence            9999999999987543

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=1.2e-53  Score=406.39  Aligned_cols=236  Identities=19%  Similarity=0.301  Sum_probs=220.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|+.++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++ ++|+++|+++++++++|+|
T Consensus       232 ~~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f-~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~  309 (477)
T TIGR01722       232 TTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAY-GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPG  309 (477)
T ss_pred             HHHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCC
Confidence            4577899999999999999999999999999999999999 9999999999999999999 9999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.++++++++++++. +|+++++||...     ..|+|++|||+.+++++|.+++||+||||++|++|
T Consensus       310 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~  389 (477)
T TIGR01722       310 DDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEA  389 (477)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEe
Confidence            5 6889999999999999999999986 578999998752     25889999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--CcchHHHHHHhh
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFS  232 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~  232 (282)
                      +|++|||+++|+++|||+++|||+|.+++++++.++++|.|+||++... ..+.+||||+|.||+|  +++|.+++++||
T Consensus       390 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~  468 (477)
T TIGR01722       390 DTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYT  468 (477)
T ss_pred             CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhc
Confidence            9999999999999999999999999999999999999999999986432 4467899999999999  578999999999


Q ss_pred             hccEEeEe
Q 023415          233 HKKAVLSR  240 (282)
Q Consensus       233 ~~k~v~~~  240 (282)
                      +.|++++.
T Consensus       469 ~~k~i~~~  476 (477)
T TIGR01722       469 RGKTVTTR  476 (477)
T ss_pred             CeeEEEEe
Confidence            99998865

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.5e-53  Score=406.47  Aligned_cols=235  Identities=20%  Similarity=0.282  Sum_probs=215.7

Q ss_pred             hhhhc-CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcH-HHHHHHHHHHHhhccCCC
Q 023415            3 AAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKN   80 (282)
Q Consensus         3 ~aa~~-~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~   80 (282)
                      +|+.+ .++++||||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++| |+|+++|+++++++++|+
T Consensus       231 ~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~  309 (487)
T PRK09457        231 QFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAF-ISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGR  309 (487)
T ss_pred             HHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHh-hccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCC
Confidence            44544 6788999999999999999999999999999999 99999999999999999998 999999999999999999


Q ss_pred             CC--CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           81 PL--ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        81 ~~--~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      |.  +.+++||++++.+++++.++++++. +|++++.||.. ++.|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus       310 p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~  388 (487)
T PRK09457        310 WDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDD  388 (487)
T ss_pred             CCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCC
Confidence            84  5789999999999999999999986 57899988764 345799999999 7999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +||||+++|+++|||+++|||+|.++++++++++++|.|+||+...+ ..+.+||||+|.||+|+++|..+ .+|++.|+
T Consensus       389 ~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~  466 (487)
T PRK09457        389 FDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADYCAYPM  466 (487)
T ss_pred             HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhheeeeE
Confidence            99999999999999999999999999999999999999999987654 45679999999999999999545 55999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      ++.+.
T Consensus       467 ~~~~~  471 (487)
T PRK09457        467 ASLES  471 (487)
T ss_pred             EEEec
Confidence            98875

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.5e-54  Score=422.09  Aligned_cols=237  Identities=17%  Similarity=0.303  Sum_probs=217.7

Q ss_pred             hhhcCCcEEEeCCCCCceEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC
Q 023415            4 AAKHLTPVLLELGGKSPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG   78 (282)
Q Consensus         4 aa~~~~~~~lElgG~np~iV~~dAD-----l~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~   78 (282)
                      |++++||+++|||||||+||++|||     +|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       247 a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v  325 (675)
T PRK11563        247 VVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMT-VKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVV  325 (675)
T ss_pred             hhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHH-HhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCcc
Confidence            5689999999999999999999995     9999999999999 999999999999999999999999999999999999


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC--------CCCceecceEEeeCCC--CCcccccccccc
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPR--DSLIMSEEIFGP  147 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~--------~~g~~~~Ptv~~~~~~--~~~i~~~E~fgP  147 (282)
                      |+|. +.+++||++++.+++++.++|+++++.+++++||...        ..|+|++|||+.++++  ++++++||+|||
T Consensus       326 G~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGP  405 (675)
T PRK11563        326 GDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGP  405 (675)
T ss_pred             CCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCC
Confidence            9995 6789999999999999999999997669999998531        3589999999999998  579999999999


Q ss_pred             eeeEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc--cceEEECCCCc------c-cCCCCCCcccCCCCC
Q 023415          148 LLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV------H-LAVHSLPFGGVQESG  218 (282)
Q Consensus       148 vl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~--~g~v~iN~~~~------~-~~~~~~pfGG~~~SG  218 (282)
                      |++|++|+|++|||+++|+++|||++||||+|.+++.+++++++  +|.|+||+.+.      + ...+.+||||+|.||
T Consensus       406 Vl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG  485 (675)
T PRK11563        406 VSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAG  485 (675)
T ss_pred             ceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCC
Confidence            99999999999999999999999999999999999999999997  99999997531      1 123678999999999


Q ss_pred             CCCc-chHHHHHHhhhccEEeEeC
Q 023415          219 MGAY-HGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       219 ~G~~-~g~~~l~~~~~~k~v~~~~  241 (282)
                      +|++ +|.+++++|++.|++...+
T Consensus       486 ~G~~~~g~~~~~~f~~~k~~~~~~  509 (675)
T PRK11563        486 GGEELGGLRGVKHYMQRTAVQGSP  509 (675)
T ss_pred             CCccccchhHHHHhheeeeeecCH
Confidence            9999 5699999999999986544

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=1.2e-53  Score=403.69  Aligned_cols=228  Identities=24%  Similarity=0.458  Sum_probs=215.1

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      .++|+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|. +++
T Consensus       220 ~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~  298 (451)
T cd07146         220 GYKRQLLELGGNDPLIVMDDADLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPAT  298 (451)
T ss_pred             cCCceeeecCCCceEEECCCCCHHHHHHHHHHHHH-hhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            37899999999999999999999999999999999 9999999999999999999999999999999999999985 688


Q ss_pred             cccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                      ++||++++.++++++++++++. +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++
T Consensus       299 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~  376 (451)
T cd07146         299 DMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAIS  376 (451)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHH
Confidence            9999999999999999999986 57899999864  48899999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCC-CCcchHHHHHHhhhccEEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM-GAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~-G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+++|||+++|||+|.+++++++.++++|+|+||+.+. ...+.+||||+|.||+ |+++|++++++||+.|++.
T Consensus       377 n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         377 NSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             hCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99999999999999999999999999999999998653 3456899999999995 8999999999999999875

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-53  Score=406.57  Aligned_cols=234  Identities=16%  Similarity=0.245  Sum_probs=213.1

Q ss_pred             hhhcCCcEEEeCCCCCceEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC
Q 023415            4 AAKHLTPVLLELGGKSPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG   78 (282)
Q Consensus         4 aa~~~~~~~lElgG~np~iV~~dAD-----l~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~   78 (282)
                      +++++||++||||||||+||++|||     ++.+++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       247 ~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~  325 (521)
T PRK11903        247 VVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMT-VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTV  325 (521)
T ss_pred             hhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHH-hccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccC
Confidence            4588999999999999999999999     5999999999999 999999999999999999999999999999999999


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC-------CCCceecceEEeeCCC--CCcccccccccce
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPL  148 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~--~~~i~~~E~fgPv  148 (282)
                      |+|. +.+++||++++.+++++.++|+...+++++++||...       ..|+|++|||+.++++  ++.+++||+||||
T Consensus       326 G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPv  405 (521)
T PRK11903        326 GNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPV  405 (521)
T ss_pred             CCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCe
Confidence            9996 5789999999999999999999777789999998641       2478999999987654  4689999999999


Q ss_pred             eeEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ccceEEECCCCc-------ccCCCCCCcccCCCCCC
Q 023415          149 LPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAV-------HLAVHSLPFGGVQESGM  219 (282)
Q Consensus       149 l~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l--~~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~  219 (282)
                      ++|++|+|.+|+|+++|+++|||++||||+|.+++.++++++  ++|+|+||+...       ....+.+||||+|.||+
T Consensus       406 l~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~  485 (521)
T PRK11903        406 ATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGG  485 (521)
T ss_pred             EEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcC
Confidence            999999999999999999999999999999999999999999  899999997542       12345789999999999


Q ss_pred             CCcc-hHHHHHHhhhccEEe
Q 023415          220 GAYH-GKFSFDVFSHKKAVL  238 (282)
Q Consensus       220 G~~~-g~~~l~~~~~~k~v~  238 (282)
                      |+++ |.+++++||+.|+|.
T Consensus       486 Gr~~g~~~~l~~~t~~~~~~  505 (521)
T PRK11903        486 GEELGGLRALAFYHRRSAVQ  505 (521)
T ss_pred             CcccccHHHHHHHhccceee
Confidence            9995 589999999977654

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.2e-53  Score=402.70  Aligned_cols=228  Identities=28%  Similarity=0.538  Sum_probs=215.9

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      .++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++
T Consensus       223 ~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~  301 (453)
T cd07149         223 GLKKVTLELGSNAAVIVDADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDT  301 (453)
T ss_pred             CCCceeeecCCCceEEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Confidence            37999999999999999999999999999999999 9999999999999999999999999999999999999986 578


Q ss_pred             cccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                      ++||++++.++++++++++++. .++++++||..  .|+|++|||+.++++++++++||+||||++|++|+|++|||+++
T Consensus       302 ~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~  379 (453)
T cd07149         302 DVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMA  379 (453)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHH
Confidence            9999999999999999999986 57799999875  47899999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+++|||+++|||+|.+++.++++++++|.|+||+.... ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       380 n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         380 NDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTF-RVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             hCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            999999999999999999999999999999999997643 3467999999999999999999999999999875

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=3.2e-53  Score=398.58  Aligned_cols=228  Identities=23%  Similarity=0.333  Sum_probs=211.2

Q ss_pred             hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhhccCCCCC-C
Q 023415            6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPL-E   83 (282)
Q Consensus         6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~-~   83 (282)
                      .+++++++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++++|+|. +
T Consensus       198 ~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~  276 (431)
T cd07095         198 RPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-LTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAE  276 (431)
T ss_pred             cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCC
Confidence            447999999999999999999999999999999999 999999999999999999 9999999999999999999996 5


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           84 SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        84 ~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      .+++||++++.+++++.++++++. +|+++++||.. ++.|+|++|||+ +++++|.+++||+||||++|++|+|++|||
T Consensus       277 ~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai  355 (431)
T cd07095         277 PPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAI  355 (431)
T ss_pred             CCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHH
Confidence            689999999999999999999996 57899999864 346899999999 689999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +++|+++|||+++|||+|.++++++++++++|.|+||++... ..+.+||||+|.||+|+++|.++++.| ..|++
T Consensus       356 ~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~-~~~~~  429 (431)
T cd07095         356 ALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTG-ASSTAPFGGVGLSGNHRPSAYYAADYC-AYPVA  429 (431)
T ss_pred             HHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCcccccCCCCChHHHHHHH-hhhhc
Confidence            999999999999999999999999999999999999987653 456799999999999999999999955 44443

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=1.1e-52  Score=400.50  Aligned_cols=235  Identities=21%  Similarity=0.317  Sum_probs=215.7

Q ss_pred             hhhhc-CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcH-HHHHHHHHHHHhhccCCC
Q 023415            3 AAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKN   80 (282)
Q Consensus         3 ~aa~~-~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~   80 (282)
                      +|+++ .++++||||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++ |+|+++|++.+++++.|+
T Consensus       229 ~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~  307 (484)
T TIGR03240       229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAF-ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGA  307 (484)
T ss_pred             HhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCC
Confidence            44554 6889999999999999999999999999999999 99999999999999999985 999999999999999998


Q ss_pred             C--CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           81 P--LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        81 ~--~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      |  ++++++||++++.+++++.++++++. +|+++++||.. ++.++|++|||+ +++++|.+++||+||||++|++|+|
T Consensus       308 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~  386 (484)
T TIGR03240       308 WDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDD  386 (484)
T ss_pred             CCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCC
Confidence            6  35789999999999999999999986 57899888764 345789999999 6899999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      ++|||+++|+++|||+++|||+|.+++++++.++++|.|+||+...+ ..+.+||||+|.||+|+++|.++++ |++.|+
T Consensus       387 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~  464 (484)
T TIGR03240       387 FDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YCAYPV  464 (484)
T ss_pred             HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-heeeeE
Confidence            99999999999999999999999999999999999999999987655 4577999999999999999966655 999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      ++++.
T Consensus       465 ~~~~~  469 (484)
T TIGR03240       465 ASLEA  469 (484)
T ss_pred             EEEec
Confidence            98885

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.5e-52  Score=398.93  Aligned_cols=229  Identities=26%  Similarity=0.479  Sum_probs=217.2

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD   86 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~   86 (282)
                      ++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||++++|+|+++|.+++++++.|+|. +.++
T Consensus       242 ~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~  320 (473)
T cd07082         242 MKRLVLELGGKDPAIVLPDADLELAAKEIVKGAL-SYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVD  320 (473)
T ss_pred             CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-HhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            8999999999999999999999999999999999 9999999999999999999999999999999999999886 5689


Q ss_pred             ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                      +||++++.++++++++++++. +++++++||... .|+|+.||++.++++++++++||+||||++|++|+|++|||+++|
T Consensus       321 ~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n  399 (473)
T cd07082         321 ITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELAN  399 (473)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHh
Confidence            999999999999999999886 578999998764 389999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      +++|||+++|||+|.+.+.++++++++|.|+||++..+ ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       400 ~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         400 KSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             CCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence            99999999999999999999999999999999997654 34578999999999999999999999999999875

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=4.5e-52  Score=396.47  Aligned_cols=232  Identities=21%  Similarity=0.299  Sum_probs=209.8

Q ss_pred             hhhhhcC---CcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC
Q 023415            2 AAAAKHL---TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG   78 (282)
Q Consensus         2 ~~aa~~~---~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~   78 (282)
                      ++|++++   +|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++
T Consensus       257 ~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~v  335 (500)
T TIGR01238       257 QTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKV  335 (500)
T ss_pred             HHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCC
Confidence            4566666   899999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHHh-cCeEeeCCc---c-CCCCceecceEEeeCCCCCcccccccccceeeEE
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGE---R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~-~~~~~~gg~---~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~  152 (282)
                      |+|. +++++||++++.++++++++++++++ |++++.++.   . ...|+|++|||+.+  +++.++++|+||||++|+
T Consensus       336 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~  413 (500)
T TIGR01238       336 GVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVV  413 (500)
T ss_pred             CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEE
Confidence            9985 68999999999999999999999875 455553321   1 23589999999973  688899999999999999


Q ss_pred             eeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHH
Q 023415          153 TVD--KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFD  229 (282)
Q Consensus       153 ~~~--~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~  229 (282)
                      +|+  +++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||+...+...+.+||||+|.||+| +.+|.++++
T Consensus       414 ~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~  493 (500)
T TIGR01238       414 RYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLY  493 (500)
T ss_pred             EeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHH
Confidence            998  79999999999999999999999999999999999999999999766544466899999999999 799999999


Q ss_pred             HhhhccE
Q 023415          230 VFSHKKA  236 (282)
Q Consensus       230 ~~~~~k~  236 (282)
                      +|++.|.
T Consensus       494 ~~~~~k~  500 (500)
T TIGR01238       494 RLTQVQY  500 (500)
T ss_pred             HHHhhcC
Confidence            9999873

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=3.8e-51  Score=414.28  Aligned_cols=231  Identities=21%  Similarity=0.348  Sum_probs=217.3

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD   86 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~   86 (282)
                      ++|+++|+|||||+||++|||+|.|++.+++|+| .++||.|+++++||||++++|+|+++|+++++++++|+|. .+++
T Consensus       790 ~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~  868 (1038)
T PRK11904        790 IVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTD  868 (1038)
T ss_pred             CceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCC
Confidence            7899999999999999999999999999999999 9999999999999999999999999999999999999996 6899


Q ss_pred             ccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeC--CHHHHH
Q 023415           87 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSF  161 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai  161 (282)
                      +||+|++.+++++.++|+++++++++++||..++   .|+|+.|||+.  .+++.+++||+||||++|++|+  +++|+|
T Consensus       869 ~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI  946 (1038)
T PRK11904        869 VGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVI  946 (1038)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHH
Confidence            9999999999999999999988999999987643   48999999996  3577889999999999999997  699999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~  240 (282)
                      +++|+++|||+++|||+|.+++.+++.++++|.|+||+..++...+.+||||+|.||+| +.+|++++++|++.|+|+++
T Consensus       947 ~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904        947 DAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred             HHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEc
Confidence            99999999999999999999999999999999999999877766677899999999999 67899999999999999876


Q ss_pred             C
Q 023415          241 G  241 (282)
Q Consensus       241 ~  241 (282)
                      .
T Consensus      1027 ~ 1027 (1038)
T PRK11904       1027 T 1027 (1038)
T ss_pred             c
Confidence            4

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.5e-51  Score=360.85  Aligned_cols=264  Identities=29%  Similarity=0.459  Sum_probs=241.7

Q ss_pred             ChhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            1 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         1 ~~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      |+.||++++|+++|||||+|+||++|||++..+.-++++.| ..+||.|+..+|++||+++||.|+..|.+++..++.|.
T Consensus       287 ~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtf-QSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~  365 (583)
T KOG2454|consen  287 MRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTF-QSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGP  365 (583)
T ss_pred             HHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhh-hhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999999999 99999999999999999999999999999999999997


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-----CCCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-----~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      |. ...|||.|++..++|.++.++++|. .|++++.||.+     ...|.|++||++.+++++|.|++||.||||++++.
T Consensus       366 ~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~  445 (583)
T KOG2454|consen  366 PLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQ  445 (583)
T ss_pred             CccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhh
Confidence            75 6889999999999999999999996 67899999985     24689999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 023415          154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH  233 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~  233 (282)
                      +++.|++++++|+++|||.++||+.|..+..++++++++|.|.||+.... -..++||||++.||+|++.|.+||...+.
T Consensus       446 ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasf-Y~cQlPFGG~k~SGyGrFaG~EGLrg~Cn  524 (583)
T KOG2454|consen  446 AKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASF-YMCQLPFGGVKDSGYGRFAGIEGLRGCCN  524 (583)
T ss_pred             cCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhh-heeccccCCccCCCccccccHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999998654 34669999999999999999999999999


Q ss_pred             ccEEeEeC-----CCCCCCCcCCCCchh-HHHHHHHHHh
Q 023415          234 KKAVLSRG-----FIGDVPVRYPPYTKG-KLRLLKVLIS  266 (282)
Q Consensus       234 ~k~v~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~  266 (282)
                      .|+|....     +..|....||-|... -+.+.|.++.
T Consensus       525 ~Ksv~yd~~~~~~t~ip~aldypi~~s~kaW~fvrsli~  563 (583)
T KOG2454|consen  525 VKSVAYDRVAENATEIPEALDYPIYGSLKAWDFVRSLID  563 (583)
T ss_pred             ccceeccchhhhhccCCccccccCcChhhHHHHHHHHHH
Confidence            99996554     234566778888744 4777777666

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=3.5e-50  Score=378.71  Aligned_cols=235  Identities=32%  Similarity=0.555  Sum_probs=222.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.++++++|+++|+||+||+||++|+|++.|++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|
T Consensus       193 ~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p  271 (432)
T cd07078         193 RAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF-GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNP  271 (432)
T ss_pred             HHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCC
Confidence            3567889999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC--CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++++++. .++++++||..++  .|+|++|||+.+++++++++++|+||||++|++|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~  351 (432)
T cd07078         272 LDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDE  351 (432)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCH
Confidence            4 7889999999999999999999886 5779999987654  4899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+.++||+++|||+|.+.+++++.++++|+|+||+...+ ..+.+||||.+.||+|+++|++++++|++.|++
T Consensus       352 ~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v  430 (432)
T cd07078         352 EEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTV  430 (432)
T ss_pred             HHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEE
Confidence            9999999999999999999999999999999999999999998876 578999999999999999999999999999987


Q ss_pred             e
Q 023415          238 L  238 (282)
Q Consensus       238 ~  238 (282)
                      .
T Consensus       431 ~  431 (432)
T cd07078         431 T  431 (432)
T ss_pred             E
Confidence            5

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=8e-49  Score=401.55  Aligned_cols=236  Identities=21%  Similarity=0.346  Sum_probs=214.4

Q ss_pred             hhhhc---CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCC
Q 023415            3 AAAKH---LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK   79 (282)
Q Consensus         3 ~aa~~---~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g   79 (282)
                      .++.+   .+|+++|+|||||+||++|||+|.|++.+++|+| .++||.|+++++||||++++|+|+++|+++++++++|
T Consensus       774 ~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vG  852 (1208)
T PRK11905        774 TLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAF-DSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIG  852 (1208)
T ss_pred             HHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCC
Confidence            44544   5999999999999999999999999999999999 9999999999999999999999999999999999999


Q ss_pred             CCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           80 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      +|. .++++||+|++.+++++.++|+++++.++.+.+|..+   ..|+|+.|||+. + +++.++++|+||||++|++|+
T Consensus       853 dP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~  930 (1208)
T PRK11905        853 DPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFK  930 (1208)
T ss_pred             CchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeC
Confidence            996 5889999999999999999999998665544443322   358999999997 3 578899999999999999997


Q ss_pred             --CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhh
Q 023415          156 --KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFS  232 (282)
Q Consensus       156 --~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~  232 (282)
                        +++|+|+++|+++|||+++|||+|.+.+.++++++++|.|+||+..++...+.+||||+|.||+| +.+|++++.+|+
T Consensus       931 ~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~ 1010 (1208)
T PRK11905        931 ADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLV 1010 (1208)
T ss_pred             CCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHh
Confidence              79999999999999999999999999999999999999999999877766677899999999999 489999999999


Q ss_pred             hccEEeEeC
Q 023415          233 HKKAVLSRG  241 (282)
Q Consensus       233 ~~k~v~~~~  241 (282)
                      +.|+++...
T Consensus      1011 ~~k~v~~~~ 1019 (1208)
T PRK11905       1011 REAPTPIPP 1019 (1208)
T ss_pred             hcceeeccc
Confidence            999988553

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=4.3e-48  Score=366.07  Aligned_cols=223  Identities=17%  Similarity=0.270  Sum_probs=199.1

Q ss_pred             hhhhh--cCCcEEEeCCCCCceEEcCCC---CHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhh
Q 023415            2 AAAAK--HLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~--~~~~~~lElgG~np~iV~~dA---Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~   75 (282)
                      ++|++  ++||+++|||||||+||++||   |++.|++.+++++| .|+||.|++++|||||++ ++|+|+++|++++++
T Consensus       208 ~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~  286 (454)
T cd07129         208 DAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLT-LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAA  286 (454)
T ss_pred             HHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHh-cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhc
Confidence            34566  699999999999999999999   89999999999999 999999999999999999 999999999999998


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHH-h-cCeEeeCCccCCCCceecceEEeeCC---CCCcccccccccceee
Q 023415           76 FYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-V-SGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLP  150 (282)
Q Consensus        76 ~~~g~~~~~~~~gpli~~~~~~~i~~~i~~a~-~-~~~~~~gg~~~~~g~~~~Ptv~~~~~---~~~~i~~~E~fgPvl~  150 (282)
                      ++.         ||++++.+.++..+.++++. . |+++++||..+..|+|++|||+...+   ++|++++||+||||++
T Consensus       287 ~~~---------g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~  357 (454)
T cd07129         287 APA---------QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASL  357 (454)
T ss_pred             cCC---------CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEE
Confidence            764         35666666677777777775 4 67999999765568999999998555   6899999999999999


Q ss_pred             EEeeCCHHHHHHHHhcCCCCceEEEecCC--HHHHHHHHhhc--ccceEEECCCCcccC-CCCCCccc-CCCCCCCCc--
Q 023415          151 ILTVDKIEDSFDIINSGTKPLAAYLFTNN--KKLKQQFVETV--SAGGLVINDTAVHLA-VHSLPFGG-VQESGMGAY--  222 (282)
Q Consensus       151 v~~~~~~~eai~~~n~~~~gL~a~i~t~d--~~~~~~~~~~l--~~g~v~iN~~~~~~~-~~~~pfGG-~~~SG~G~~--  222 (282)
                      |++|+|.+|+|+++|++.|||+++|||+|  .+++++++.++  ++|.|+||+++.+.. .+.+|||| +|.||.|++  
T Consensus       358 v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~  437 (454)
T cd07129         358 VVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTS  437 (454)
T ss_pred             EEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCcccc
Confidence            99999999999999999999999999999  79999999999  699999998765432 25899999 999999998  


Q ss_pred             chHHHHHHhhhc
Q 023415          223 HGKFSFDVFSHK  234 (282)
Q Consensus       223 ~g~~~l~~~~~~  234 (282)
                      +|.+++++||++
T Consensus       438 ~g~~~~~~~~~~  449 (454)
T cd07129         438 VGTAAIERFLRP  449 (454)
T ss_pred             ccHHHHHHhccc
Confidence            799999999876

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=7e-48  Score=394.40  Aligned_cols=225  Identities=20%  Similarity=0.328  Sum_probs=208.0

Q ss_pred             CcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCcc
Q 023415            9 TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDL   87 (282)
Q Consensus         9 ~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~   87 (282)
                      +|+++|+|||||+||++|||+|.|++.+++|+| .++||.|++.+++|||++++|+|+++|+++++++++|+|. .++++
T Consensus       878 ~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF-~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdv  956 (1318)
T PRK11809        878 IPLIAETGGQNAMIVDSSALTEQVVADVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDI  956 (1318)
T ss_pred             eeEEEecCCccceEECCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCc
Confidence            899999999999999999999999999999999 9999999999999999999999999999999999999996 68999


Q ss_pred             cccCCHHHHHHHHHHHHHHHh-cCeEeeCCccC----CCCceecceEEeeCCCCCcccccccccceeeEEeeC--CHHHH
Q 023415           88 SRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDS  160 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~~-~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--~~~ea  160 (282)
                      ||+|++.++++++++|+++++ |++++.|+...    ..|+|++|||+..  +++.++++|+||||++|++|+  +++|+
T Consensus       957 GPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldea 1034 (1318)
T PRK11809        957 GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDEL 1034 (1318)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHH
Confidence            999999999999999999965 55777766432    3599999999974  567889999999999999996  79999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKA  236 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~  236 (282)
                      |+.+|+++|||+++|||+|.+++.++++++++|.|+||...++...+.+||||+|.||+| +.+|++++..|+..+.
T Consensus      1035 I~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1035 IEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             HHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            999999999999999999999999999999999999999876655567899999999999 5799999999999874

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=1e-47  Score=362.24  Aligned_cols=220  Identities=17%  Similarity=0.230  Sum_probs=195.9

Q ss_pred             CcEEEeCCCCCceEEcCCC-CHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            9 TPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         9 ~~~~lElgG~np~iV~~dA-Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      +|+++|||||||+||++|| |+|.|++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++++|    +++
T Consensus       202 ~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~  276 (442)
T cd07084         202 ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT-ACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLL  276 (442)
T ss_pred             CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh-cccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccc
Confidence            8999999999999999999 69999999999999 999999999999999999 9999999999999999887    578


Q ss_pred             ccccCCHHHHHHHHHHHHHHHh-cCeEeeCCccCC-------CCceecceEEeeCCCCC---cccccccccceeeEEeeC
Q 023415           87 LSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-------NKLRIAPTLLLDVPRDS---LIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~~-~~~~~~gg~~~~-------~g~~~~Ptv~~~~~~~~---~i~~~E~fgPvl~v~~~~  155 (282)
                      +||++++...+++++.++   . ++++++||...+       .|+|++|||+.+++++|   ++++||+||||++|++|+
T Consensus       277 ~gpl~~~~~~~~i~~a~~---~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~  353 (442)
T cd07084         277 LGPVQTFTTLAMIAHMEN---LLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYK  353 (442)
T ss_pred             cChhhhHHHHHHHHHHHh---cCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeC
Confidence            999987655554444432   3 478999987521       48899999999999997   999999999999999999


Q ss_pred             C--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ccceEEECCCCcccCCCCCCccc-CCCCCCCCcc-hHHHHHH
Q 023415          156 K--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHLAVHSLPFGG-VQESGMGAYH-GKFSFDV  230 (282)
Q Consensus       156 ~--~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~~~~pfGG-~~~SG~G~~~-g~~~l~~  230 (282)
                      |  .+|+++++|+++|||+++|||+|.++++++++++ ++|+|+||+.++....+..|||| .|.||+|++. |.+++++
T Consensus       354 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~  433 (442)
T cd07084         354 KDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKL  433 (442)
T ss_pred             CccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhh
Confidence            9  9999999999999999999999999999999999 99999999863333456678877 8899999885 9999999


Q ss_pred             hhhccE
Q 023415          231 FSHKKA  236 (282)
Q Consensus       231 ~~~~k~  236 (282)
                      |++...
T Consensus       434 ~~~~~~  439 (442)
T cd07084         434 VWRCHA  439 (442)
T ss_pred             eeeeee
Confidence            997754

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=1.2e-45  Score=350.17  Aligned_cols=211  Identities=15%  Similarity=0.235  Sum_probs=189.5

Q ss_pred             CcEEEeCCCCCceEEcCCC-CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCc-HHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            9 TPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         9 ~~~~lElgG~np~iV~~dA-Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      +++.+|+|||||+||++|| |+|.|++.+++++| .|+||.|++++|+|||+++ +|+|+++|++.+++++.++    ++
T Consensus       242 ~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f-~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~  316 (489)
T cd07126         242 GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAY-ACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LT  316 (489)
T ss_pred             CCEEeecCCCCceEECCCcccHHHHHHHHHHHHH-hcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----Cc
Confidence            6899999999999999999 99999999999999 9999999999999999995 6899999999999988764    58


Q ss_pred             ccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccCC-----CC-ceecceEEee------CCCCCcccccccccceeeEE
Q 023415           87 LSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDK-----NK-LRIAPTLLLD------VPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~~-----~g-~~~~Ptv~~~------~~~~~~i~~~E~fgPvl~v~  152 (282)
                      +||+++.. .+++.++++++.  +|+++++||..++     .+ .|++|||+..      ++++|++++||+||||++|+
T Consensus       317 ~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~  395 (489)
T cd07126         317 IGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVT  395 (489)
T ss_pred             CCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEE
Confidence            99999998 899999999986  5789999997643     23 3899999842      57799999999999999999


Q ss_pred             eeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccce--EEECCCCcccCCC--CCCcccCCCCCCCCcchH
Q 023415          153 TVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG--LVINDTAVHLAVH--SLPFGGVQESGMGAYHGK  225 (282)
Q Consensus       153 ~~~~--~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~~--~~pfGG~~~SG~G~~~g~  225 (282)
                      +|+|  ++|||+++|+++|||++||||+|.++++++++++++|.  |+||+.+++....  ..||||+|.||.|+++..
T Consensus       396 ~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~  474 (489)
T cd07126         396 EYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI  474 (489)
T ss_pred             EECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHH
Confidence            9999  99999999999999999999999999999999999999  6699877654222  299999999999987644

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=4.9e-46  Score=348.86  Aligned_cols=212  Identities=16%  Similarity=0.279  Sum_probs=186.6

Q ss_pred             hhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCC
Q 023415            4 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE   83 (282)
Q Consensus         4 aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~   83 (282)
                      .++..||+++|||||||+||++|||+|.|++.|++++| +|+||.|++++|||||+++||+|+++|+++ .         
T Consensus       196 v~~~~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~---------  264 (429)
T cd07121         196 ALSSGKKAIGAGAGNPPVVVDETADIEKAARDIVQGAS-FDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G---------  264 (429)
T ss_pred             HHhCCCceEeecCCCceEEEecCCCHHHHHHHHHhccc-ccCCCCCCccceEEEeHHHHHHHHHHHHHC-C---------
Confidence            34557999999999999999999999999999999999 999999999999999999999999999885 1         


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHh---cCeEeeCCcc----CCCCceec---ceEEeeCCCCCcccccccccceeeEEe
Q 023415           84 SKDLSRIVNSNHFARLSKLLDDDKV---SGKIVHGGER----DKNKLRIA---PTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        84 ~~~~gpli~~~~~~~i~~~i~~a~~---~~~~~~gg~~----~~~g~~~~---Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                          .+++++++++++.++++++.+   +++++.||..    +..|+++.   |||+.+++++|++++||+||||++|++
T Consensus       265 ----~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~  340 (429)
T cd07121         265 ----AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVR  340 (429)
T ss_pred             ----CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEE
Confidence                137899999999999998865   3688888753    12477877   599999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCC--CCcchHHHHH
Q 023415          154 VDKIEDSFDIINSGTKPL--AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYHGKFSFD  229 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL--~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~g~~~l~  229 (282)
                      |+|+||||+++|+++|||  +++|||+|.++++++++++++|.|+||++..    +.+||||+|.|++  |..-| +++ 
T Consensus       341 ~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~-~~~-  414 (429)
T cd07121         341 VKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG-EGL-  414 (429)
T ss_pred             eCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC-cCc-
Confidence            999999999999999998  9999999999999999999999999998643    5689999999988  65555 444 


Q ss_pred             HhhhccEEe
Q 023415          230 VFSHKKAVL  238 (282)
Q Consensus       230 ~~~~~k~v~  238 (282)
                        +..|+++
T Consensus       415 --~~~~~~~  421 (429)
T cd07121         415 --TSARTFT  421 (429)
T ss_pred             --cChhhhh
Confidence              4555544

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=3.1e-45  Score=343.75  Aligned_cols=221  Identities=17%  Similarity=0.235  Sum_probs=187.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| +|+||.|++.+|+|||+++||+|+++|++++        
T Consensus       192 ~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------  262 (439)
T cd07081         192 KAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKT-FDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------  262 (439)
T ss_pred             HHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHh-cCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------
Confidence            5678899999999999999999999999999999999999 9999999999999999999999999998853        


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHh-cCeEeeCCcc----CCCCceecce---EEeeCC--CCCcccccccccceeeE
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER----DKNKLRIAPT---LLLDVP--RDSLIMSEEIFGPLLPI  151 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~-~~~~~~gg~~----~~~g~~~~Pt---v~~~~~--~~~~i~~~E~fgPvl~v  151 (282)
                            ||+++..++++++++|+++.. |+++ .||..    ...|++++||   ++.+++  ++|++++||+||||++|
T Consensus       263 ------gpli~~~~~~~v~~~i~~a~~~Ga~~-~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v  335 (439)
T cd07081         263 ------AYKLTAEELQQVQPVILKNGDVNRDI-VGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAM  335 (439)
T ss_pred             ------CccCCHHHHHHHHHHHHhcCCcCCcc-cCCCHHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEE
Confidence                  789999999999999998865 5554 55532    1258899998   998888  99999999999999999


Q ss_pred             EeeCCHHHHHHHHhcC----CCCceEEEecCC---HHHHHHHHhhcccceEEECCCC-cccCCCCCCcccCCCC--CCCC
Q 023415          152 LTVDKIEDSFDIINSG----TKPLAAYLFTNN---KKLKQQFVETVSAGGLVINDTA-VHLAVHSLPFGGVQES--GMGA  221 (282)
Q Consensus       152 ~~~~~~~eai~~~n~~----~~gL~a~i~t~d---~~~~~~~~~~l~~g~v~iN~~~-~~~~~~~~pfGG~~~S--G~G~  221 (282)
                      ++|+|+||||+++|++    +|||+++|||+|   .++++++++++++|.|+||.+. +.......-|||...+  |+|.
T Consensus       336 ~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~  415 (439)
T cd07081         336 YRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGT  415 (439)
T ss_pred             EEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCC
Confidence            9999999999999965    899999999999   9999999999999999999865 3323333456666554  5566


Q ss_pred             cchHHH-----HHHhhhccEEe
Q 023415          222 YHGKFS-----FDVFSHKKAVL  238 (282)
Q Consensus       222 ~~g~~~-----l~~~~~~k~v~  238 (282)
                      ++|...     ..+|++.|.|.
T Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~  437 (439)
T cd07081         416 WGGNSVSENVGPKHLVNLKTVA  437 (439)
T ss_pred             CCCCCcCCCCChHhhheeeeee
Confidence            555543     45666666554

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=1.3e-44  Score=341.99  Aligned_cols=215  Identities=15%  Similarity=0.275  Sum_probs=185.5

Q ss_pred             hhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCC
Q 023415            5 AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES   84 (282)
Q Consensus         5 a~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~   84 (282)
                      +++.||+++|+|||||+||++|||+|.|++.|++++| .|+||.|+|++|||||+++||+|+++|+++.           
T Consensus       229 ~~~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~-~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~-----------  296 (465)
T PRK15398        229 MKSGKKAIGAGAGNPPVVVDETADIEKAARDIVKGAS-FDNNLPCIAEKEVIVVDSVADELMRLMEKNG-----------  296 (465)
T ss_pred             HHcCCceeeecCCCceEEEecCCCHHHHHHHHHHhcc-cCCCCcCCCCceEEEeHHHHHHHHHHHHHcC-----------
Confidence            3468999999999999999999999999999999999 9999999999999999999999999998751           


Q ss_pred             CcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc----CCCCcee---cceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           85 KDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER----DKNKLRI---APTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~----~~~g~~~---~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                         .|++++.+++++.++++++. ++++++.||..    ...|+++   +|||+.+++++|++++||+||||++|++|+|
T Consensus       297 ---~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d  373 (465)
T PRK15398        297 ---AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKD  373 (465)
T ss_pred             ---CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCC
Confidence               26899999999999998654 33466666542    1246655   4799999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          157 IEDSFDIINSGTKPL--AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       157 ~~eai~~~n~~~~gL--~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +||||+++|+++|||  +++|||+|.++++++++++++|.|+||.+..    +.+||||.|.|... .+|+.| ...|..
T Consensus       374 ~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~-~~~~~g-~~~~~~  447 (465)
T PRK15398        374 VDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTFT-IATPTG-EGVTSA  447 (465)
T ss_pred             HHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc----cccCcCCCCCceee-ecccCC-CCccch
Confidence            999999999999988  9999999999999999999999999998642    57899999998742 236666 666666


Q ss_pred             cEEeEe
Q 023415          235 KAVLSR  240 (282)
Q Consensus       235 k~v~~~  240 (282)
                      |+++.+
T Consensus       448 ~~~~~~  453 (465)
T PRK15398        448 RTFTRR  453 (465)
T ss_pred             hhhhhh
Confidence            665544

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=1.6e-44  Score=336.96  Aligned_cols=189  Identities=19%  Similarity=0.277  Sum_probs=170.5

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL   87 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~   87 (282)
                      +||+++|||||||+||++|||+|.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++           
T Consensus       212 ~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~-----------  278 (406)
T cd07079         212 TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKT-QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA-----------  278 (406)
T ss_pred             CCCEEeecCCcceEEEeCCCCHHHHHHHHHHccc-CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC-----------
Confidence            8999999999999999999999999999999999 9999 99999999999999999999999877752           


Q ss_pred             cccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415           88 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG  167 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~  167 (282)
                                           +++++ ||...  ..|++||    ++++|++++||+||||++|++|+|+||||+++|++
T Consensus       279 ---------------------ga~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~  330 (406)
T cd07079         279 ---------------------GVELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRY  330 (406)
T ss_pred             ---------------------CCEEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHh
Confidence                                 34433 33221  1367888    78899999999999999999999999999999999


Q ss_pred             CCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCC----CCcchHHHHHHhhhccEEeE
Q 023415          168 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM----GAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       168 ~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~----G~~~g~~~l~~~~~~k~v~~  239 (282)
                      +|||+++|||+|.++++++++++++|.|+||++...  .+.+||||.+.||.    |+++|.+++++|++.|++.+
T Consensus       331 ~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~--~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~  404 (406)
T cd07079         331 GSGHTEAIVTENYETAERFLREVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR  404 (406)
T ss_pred             CCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcc--cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence            999999999999999999999999999999987643  35679999999988    89999999999999999875

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=1e-43  Score=332.63  Aligned_cols=191  Identities=17%  Similarity=0.255  Sum_probs=170.9

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      .+||+++|||||||+||++|||++.|++.+++++| .|+| .|++++|+|||+++||+|+++|+++++++..+       
T Consensus       217 a~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------  287 (417)
T PRK00197        217 ATVPVIEHGDGICHIYVDESADLDKALKIVLNAKT-QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-------  287 (417)
T ss_pred             cCCCEEeecCCcceEEEeCCCCHHHHHHHHHHhcc-CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------
Confidence            58999999999999999999999999999999999 9999 99999999999999999999999999876432       


Q ss_pred             ccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415           87 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS  166 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~  166 (282)
                                               ++ ||... .+ |+ |||+   +++|.+++||+||||++|++|+|++|||+++|+
T Consensus       288 -------------------------~~-~~~~~-~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~  335 (417)
T PRK00197        288 -------------------------LR-GDEAA-LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINR  335 (417)
T ss_pred             -------------------------Ee-cCHHH-HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHh
Confidence                                     11 11100 12 22 9998   468999999999999999999999999999999


Q ss_pred             CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEeEe
Q 023415          167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~  240 (282)
                      ++|||+++|||+|.++++++++++++|.|+||++...  .+..||||.+.||+|    +++|.+++++|++.|++.+.
T Consensus       336 ~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~--~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~  411 (417)
T PRK00197        336 YGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG  411 (417)
T ss_pred             cCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCcc--CCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence            9999999999999999999999999999999987643  356899999999999    99999999999999998864

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=2.8e-42  Score=330.54  Aligned_cols=227  Identities=20%  Similarity=0.310  Sum_probs=194.1

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCC---------cHHHHHHHHHHHHhhccC
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYG   78 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~   78 (282)
                      .+|+++|+|||||+||++|||++.+++.+++|+| .|+||.|++++|||||++         +||+|+++|+++++++ .
T Consensus       299 ~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f-~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~  376 (549)
T cd07127         299 QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLS-LYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-L  376 (549)
T ss_pred             cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-ccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-c
Confidence            5899999999999999999999999999999999 999999999999999999         8999999999999999 7


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC----CC-ceecceEEeeCCCCCcccccccccceeeEE
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK----NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~----~g-~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~  152 (282)
                      |||. ..+++||++++.+++|+++.+    +.+++++||..+.    .| ++++|||+...+++|++++||+||||++|+
T Consensus       377 Gdp~~~~~~~Gpli~~~~~~ri~~a~----~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~  452 (549)
T cd07127         377 ADPARAAALLGAIQSPDTLARIAEAR----QLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVV  452 (549)
T ss_pred             CCccccccccCCcCCHHHHHHHHHHH----hCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEE
Confidence            8885 578999999999999997644    4456888886431    34 456999999888999999999999999999


Q ss_pred             eeCCHHHHHHHHhcCC--C-CceEEEecCCHHHHHHHHhhc-ccc-eEEECCCCcccCCCCCCcccCCCCCCCCc-chHH
Q 023415          153 TVDKIEDSFDIINSGT--K-PLAAYLFTNNKKLKQQFVETV-SAG-GLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKF  226 (282)
Q Consensus       153 ~~~~~~eai~~~n~~~--~-gL~a~i~t~d~~~~~~~~~~l-~~g-~v~iN~~~~~~~~~~~pfGG~~~SG~G~~-~g~~  226 (282)
                      +|+|.+|+|+++|++.  + ||+++|||+|.+.++++.+++ .+| .++||.+..-..+..+||||++.||.... +..+
T Consensus       453 ~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~  532 (549)
T cd07127         453 ATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAAL  532 (549)
T ss_pred             EeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCccccccc
Confidence            9999999999999973  4 699999999999999999984 454 99999654433445566999999998855 4445


Q ss_pred             HHHHhhhccEEeEe
Q 023415          227 SFDVFSHKKAVLSR  240 (282)
Q Consensus       227 ~l~~~~~~k~v~~~  240 (282)
                      ....|...|--+++
T Consensus       533 ~~~~fv~~r~~~~~  546 (549)
T cd07127         533 TDGAFVANRFRVVQ  546 (549)
T ss_pred             chhhhhhcceEEEE
Confidence            66667666654444

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-43  Score=353.34  Aligned_cols=224  Identities=18%  Similarity=0.258  Sum_probs=199.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.|++++| +|+||.|+|+++||||++++|+|+++|+++.        
T Consensus       205 ~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------  275 (862)
T PRK13805        205 KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKT-FDNGMICASEQAVIVDDEIYDEVKEEFASHG--------  275 (862)
T ss_pred             HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhh-ccCCCccCCCceEEEehhhHHHHHHHHHHhC--------
Confidence            4677899999999999999999999999999999999999 9999999999999999999999999988752        


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcC-e-EeeCCccC----CCCceecceE------EeeCCCCCccccccccccee
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSG-K-IVHGGERD----KNKLRIAPTL------LLDVPRDSLIMSEEIFGPLL  149 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~-~-~~~gg~~~----~~g~~~~Ptv------~~~~~~~~~i~~~E~fgPvl  149 (282)
                            +|++++.++++++++++++..++ + .+.||...    ..|++++||+      +.+++++|++++ |+||||+
T Consensus       276 ------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl  348 (862)
T PRK13805        276 ------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVL  348 (862)
T ss_pred             ------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEE
Confidence                  57999999999999999875432 2 24565421    2478899987      678899999887 7899999


Q ss_pred             eEEeeCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcc--------cCCCCCCcccCCCC
Q 023415          150 PILTVDKIEDSFDIINS----GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH--------LAVHSLPFGGVQES  217 (282)
Q Consensus       150 ~v~~~~~~~eai~~~n~----~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~--------~~~~~~pfGG~~~S  217 (282)
                      +|++|+|++|||+++|+    .+|||+++|||+|.+++++|++++++|+|+||.++.+        ...+.+|||+ |.|
T Consensus       349 ~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~  427 (862)
T PRK13805        349 AMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSW  427 (862)
T ss_pred             EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCC
Confidence            99999999999999988    5899999999999999999999999999999987522        3678899998 999


Q ss_pred             CCCCcchHHHHHHhhhccEEeEeCC
Q 023415          218 GMGAYHGKFSFDVFSHKKAVLSRGF  242 (282)
Q Consensus       218 G~G~~~g~~~l~~~~~~k~v~~~~~  242 (282)
                      |.|+++|+.++++|++.|+|..+..
T Consensus       428 g~~~~~g~~g~~~~~~~k~v~~~~~  452 (862)
T PRK13805        428 GGNSVSENVGAKHLLNIKTVAKRRE  452 (862)
T ss_pred             CCCcCCCCCCHHHhheeeeeeeccc
Confidence            9999999999999999999987653

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=8.9e-43  Score=314.36  Aligned_cols=236  Identities=22%  Similarity=0.385  Sum_probs=221.0

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      +.|| .|.|++.|||||++|.||+.|||+++|++....+.| ++-|..|++..|+||.++|.|+|++++.++.+++.+|+
T Consensus       639 ~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vf-f~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~  717 (881)
T KOG2452|consen  639 KSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVF-FSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGN  717 (881)
T ss_pred             HHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhcccee-ecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCC
Confidence            3454 688999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeC--
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--  155 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--  155 (282)
                      |. .+++-||-...+|..++..+++.+. .|+++.+||.. +.+|+|++|||+++++++|.+..||-||||+.|.+|+  
T Consensus       718 pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~  797 (881)
T KOG2452|consen  718 PLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADG  797 (881)
T ss_pred             cccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCC
Confidence            96 5899999999999999999999985 57799999986 5689999999999999999999999999999999996  


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+++.+..+|++.+||+++|||+|.....++++.+.+|+|++|+..-  ..-..||||+++||+|..-|..++.+|.+.|
T Consensus       798 d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~k--tdvaapfggfkqsgfgkd~ge~alneyl~~k  875 (881)
T KOG2452|consen  798 DLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRVK  875 (881)
T ss_pred             CHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccc--cccccCCCCccccccccchhHHHHhhheeeE
Confidence            68999999999999999999999999999999999999999998653  4567899999999999999999999999999


Q ss_pred             EEeEe
Q 023415          236 AVLSR  240 (282)
Q Consensus       236 ~v~~~  240 (282)
                      +|++.
T Consensus       876 tit~e  880 (881)
T KOG2452|consen  876 TVTFE  880 (881)
T ss_pred             EEEee
Confidence            99864

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=4.1e-42  Score=328.85  Aligned_cols=227  Identities=18%  Similarity=0.263  Sum_probs=183.5

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCC---------cHHHHHHHHHHHHhhccC
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYG   78 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~   78 (282)
                      .+++++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++         +||+|+++|+++++++ .
T Consensus       299 ~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f-~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-v  376 (551)
T TIGR02288       299 QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLS-LYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-L  376 (551)
T ss_pred             cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-c
Confidence            5899999999999999999999999999999999 999999999999999999         7999999999999999 8


Q ss_pred             CCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC----CC-ceecceEEeeCCCCCcccccccccceeeEE
Q 023415           79 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK----NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        79 g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~----~g-~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~  152 (282)
                      |||. +.+++||++++.+++|+++.    .+.+++++||....    .| +|++|||+...+++|++++||+||||++|+
T Consensus       377 Gdp~~~~~~~Gplis~~~~~ri~~a----~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~  452 (551)
T TIGR02288       377 GDPARATAVLGAIQSPDTLARIAEA----RALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVV  452 (551)
T ss_pred             CCcccccccccCcCCHHHHHHHHHH----HhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEE
Confidence            8885 57899999999999997544    44457777775421    35 588999995433599999999999999999


Q ss_pred             eeCCHHHHHHHHhcC--CCC-ceEEEecCCHHHHHHHHhhc--ccceEEECCCCcccCCCCCCcccCCCCCCCCcc-hHH
Q 023415          153 TVDKIEDSFDIINSG--TKP-LAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKF  226 (282)
Q Consensus       153 ~~~~~~eai~~~n~~--~~g-L~a~i~t~d~~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~-g~~  226 (282)
                      +|+|.||||+++|++  +|| |+++|||+|.++++++.+++  ..|.++||....-..+...+|++.+.||..... ..+
T Consensus       453 ~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~  532 (551)
T TIGR02288       453 AVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASL  532 (551)
T ss_pred             EECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcc
Confidence            999999999999998  566 99999999999999999998  234444443322223334568888888876443 334


Q ss_pred             HHHHhhhccEEeEe
Q 023415          227 SFDVFSHKKAVLSR  240 (282)
Q Consensus       227 ~l~~~~~~k~v~~~  240 (282)
                      .-..|...|--+++
T Consensus       533 ~~~~~~~~r~~~~~  546 (551)
T TIGR02288       533 SDGAFVANRFRVVQ  546 (551)
T ss_pred             cchhhhhcceEEEE
Confidence            44556555544443

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=2.8e-42  Score=340.07  Aligned_cols=194  Identities=21%  Similarity=0.284  Sum_probs=172.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|+.++||+++|||||||+||++|||++.|++.+++++| .| ||.|++.+|+|||+++||+                 
T Consensus       499 ~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~-~n-GQ~C~a~~RllVh~~i~d~-----------------  559 (718)
T PLN02418        499 QIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKT-DY-PAACNAMETLLVHKDLVQN-----------------  559 (718)
T ss_pred             HHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhC-CC-CCccccCcEEEEecccccc-----------------
Confidence            4567789999999999999999999999999999999999 88 9999999999999999997                 


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                            |         ++.++|++++ +|+++ +||...+ |      ++. + ++|++++||+|||+++|++|+|+|||
T Consensus       560 ------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEA  614 (718)
T PLN02418        560 ------G---------GLNDLLVALRSAGVTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAA  614 (718)
T ss_pred             ------c---------cHHHHHHHHHHCCCEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHH
Confidence                  1         2478888886 56777 6875432 4      233 3 78999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCC--CCcc--hHHHHHHhhhccE
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYH--GKFSFDVFSHKKA  236 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~--g~~~l~~~~~~k~  236 (282)
                      |+++|+++|||+++|||+|.+++.++++++++|.|+||+++..  .+..||||+|.||+  |+++  |++++++|++.|+
T Consensus       615 I~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~--~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~  692 (718)
T PLN02418        615 IDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRF--SDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRW  692 (718)
T ss_pred             HHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCC--CCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEE
Confidence            9999999999999999999999999999999999999987542  35679999999999  9875  9999999999999


Q ss_pred             EeEeC
Q 023415          237 VLSRG  241 (282)
Q Consensus       237 v~~~~  241 (282)
                      |.+..
T Consensus       693 v~~g~  697 (718)
T PLN02418        693 ILRGN  697 (718)
T ss_pred             EEECC
Confidence            98764

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=6.7e-42  Score=325.29  Aligned_cols=222  Identities=18%  Similarity=0.193  Sum_probs=193.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHH-------Hh
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE-------LE   74 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-------~~   74 (282)
                      ++|+.+.||+++|+|||||+||++|||+|.|++.+++|+| +|+||.|+|.+|||||+++||+|+++|+++       .+
T Consensus       201 ~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~-~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~  279 (488)
T TIGR02518       201 KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKT-FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEE  279 (488)
T ss_pred             HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHh-cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHH
Confidence            4567789999999999999999999999999999999999 999999999999999999999999999998       88


Q ss_pred             hccCCCC-C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeE
Q 023415           75 NFYGKNP-L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI  151 (282)
Q Consensus        75 ~~~~g~~-~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v  151 (282)
                      .+++|+| . +.+++||+++..+++++.++++++. +++++++||..             .+++++++ ++|.||||++|
T Consensus       280 ~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v  345 (488)
T TIGR02518       280 AEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAF  345 (488)
T ss_pred             HHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEE
Confidence            8888886 3 6789999999999999999999985 67899998852             25677786 79999999999


Q ss_pred             EeeCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcc----c---C--CCCCCcccCCCCC
Q 023415          152 LTVDKIEDSFDIINS----GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH----L---A--VHSLPFGGVQESG  218 (282)
Q Consensus       152 ~~~~~~~eai~~~n~----~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~----~---~--~~~~pfGG~~~SG  218 (282)
                      ++|+|++|||+++|+    .+|||+++|||+|.+++++|++++++|+|+||++..+    .   .  ...+.||+++.++
T Consensus       346 ~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~s  425 (488)
T TIGR02518       346 YTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSS  425 (488)
T ss_pred             EEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCc
Confidence            999999999999987    6999999999999999999999999999999975422    1   1  1233466666665


Q ss_pred             CCCcchHHHHHHhhhccEEeEeC
Q 023415          219 MGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       219 ~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +.  | +-++++++..|+|...-
T Consensus       426 t~--~-~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       426 TS--D-NITPENLINIRRVAYGV  445 (488)
T ss_pred             CC--C-CCCHHHhheeeEEEecc
Confidence            55  3 78889999999887543

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-41  Score=302.83  Aligned_cols=244  Identities=23%  Similarity=0.436  Sum_probs=220.6

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC-CC-C
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-S   84 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~-~   84 (282)
                      +..+++.|.||||-.+|.++||++.++...++++| ..+||.|.+.+|+||++++++.+.++|.+..+++++||| .+ +
T Consensus       304 ~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAf-ey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~  382 (561)
T KOG2455|consen  304 TFPRLVGECGGKNFHFVHASADVESVVSSTVRSAF-EYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFS  382 (561)
T ss_pred             cchhhhccCCCcceEEeccccchHHHHHHHHHHHH-hhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCcccccc
Confidence            56789999999999999999999999999999999 999999999999999999999999999999999999998 34 7


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHhc--CeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeC--CHHH
Q 023415           85 KDLSRIVNSNHFARLSKLLDDDKVS--GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIED  159 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~i~~a~~~--~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--~~~e  159 (282)
                      +.+||+|....+.|++++|++|+..  .++++||..++ .|+|+.|||+..-+|.+++|.||+|||||+|+.|+  +++|
T Consensus       383 ~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E  462 (561)
T KOG2455|consen  383 TFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDE  462 (561)
T ss_pred             chhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHH
Confidence            8999999999999999999999854  58999999854 69999999999999999999999999999999996  4899


Q ss_pred             HHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--cceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhcc
Q 023415          160 SFDII-NSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKK  235 (282)
Q Consensus       160 ai~~~-n~~~~gL~a~i~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k  235 (282)
                      +++++ |.++|||+.+||++|.+.+.+..++++  +|..+||+.+++.....+||||.+.||+. ..+|++-+..|+.+.
T Consensus       463 ~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~  542 (561)
T KOG2455|consen  463 VLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPL  542 (561)
T ss_pred             HHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcc
Confidence            99998 669999999999999999999998776  89999999998888899999999999987 557888889999888


Q ss_pred             EEeEeCCCCCCCCcCCC
Q 023415          236 AVLSRGFIGDVPVRYPP  252 (282)
Q Consensus       236 ~v~~~~~~~~~~~~~~~  252 (282)
                      ++-.. +-...+++||.
T Consensus       543 ~ikEt-~~~l~d~~yp~  558 (561)
T KOG2455|consen  543 SIKET-FVPLTDVKYPS  558 (561)
T ss_pred             hhhhc-ccCCcccCcCC
Confidence            75433 33345667764

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=2.1e-41  Score=317.37  Aligned_cols=186  Identities=16%  Similarity=0.246  Sum_probs=160.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhc-----
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-----   76 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-----   76 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++|||||+++||+|+++|+++...+     
T Consensus       192 ~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~  270 (436)
T cd07122         192 KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKT-FDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEE  270 (436)
T ss_pred             HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhh-ccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHH
Confidence            4577899999999999999999999999999999999999 9999999999999999999999999999988765     


Q ss_pred             --cCCCC--CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeE
Q 023415           77 --YGKNP--LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI  151 (282)
Q Consensus        77 --~~g~~--~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v  151 (282)
                        +++++  ++++.+||+++..+.+++.+++..+. .+++++.++             +++++++|+++ +|.||||++|
T Consensus       271 ~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v  336 (436)
T cd07122         271 KEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE-------------ETGVGPEEPLS-REKLSPVLAF  336 (436)
T ss_pred             HHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe-------------cCCCCCCCcch-hcccCCeEEE
Confidence              55555  24567888888877777766654332 223333332             46788899987 5679999999


Q ss_pred             EeeCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHHHhhcccceEEECCCCc
Q 023415          152 LTVDKIEDSFDIINSG----TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV  202 (282)
Q Consensus       152 ~~~~~~~eai~~~n~~----~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~  202 (282)
                      ++|+|++|||+++|++    +|||+++|||+|.++++++++++++|.|+||+++.
T Consensus       337 ~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~  391 (436)
T cd07122         337 YRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSS  391 (436)
T ss_pred             EEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCcc
Confidence            9999999999999997    89999999999999999999999999999998764

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.5e-41  Score=293.71  Aligned_cols=233  Identities=22%  Similarity=0.380  Sum_probs=217.6

Q ss_pred             hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CC
Q 023415            6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ES   84 (282)
Q Consensus         6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~   84 (282)
                      .++.+..|||||||++||.+|||+..+++..+.++. ..+||.|+..+|+++|+++||+.+++|+...+++.+|+|. .+
T Consensus       257 arfgk~llelggnnaiiv~edadl~lvvps~lfaav-gtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~n  335 (507)
T KOG2453|consen  257 ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAV-GTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSN  335 (507)
T ss_pred             HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHh-cccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCC
Confidence            457788999999999999999999999999999999 9999999999999999999999999999999999999996 57


Q ss_pred             CcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHH
Q 023415           85 KDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD  162 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~  162 (282)
                      +-+||+.++++..+.+..+++++ +|+++++||+. +.+|+|++|||++ +..|.++..+|.|.|||.|.+|++++||+.
T Consensus       336 tl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~a  414 (507)
T KOG2453|consen  336 TLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIA  414 (507)
T ss_pred             ceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhhe
Confidence            89999999999999999999996 68899999997 4579999999998 899999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHh--hcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          163 IINSGTKPLAAYLFTNNKKLKQQFVE--TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       163 ~~n~~~~gL~a~i~t~d~~~~~~~~~--~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      +-|+.+.||+++|||+|.+.+.+...  ..++|.|.||-++.+ ...+-.|||.|.+|.|++.|..+.++|+++.+.++.
T Consensus       415 innev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsg-aeiggafggek~tgggresgsdswkqymrrstctin  493 (507)
T KOG2453|consen  415 INNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTIN  493 (507)
T ss_pred             eccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCc-hhhcccccCccccCCCcccCchHHHHHHhhceeeee
Confidence            99999999999999999999999885  568999999998765 345567999999999999999999999999998887


Q ss_pred             C
Q 023415          241 G  241 (282)
Q Consensus       241 ~  241 (282)
                      +
T Consensus       494 y  494 (507)
T KOG2453|consen  494 Y  494 (507)
T ss_pred             c
Confidence            5

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=6.2e-39  Score=296.27  Aligned_cols=178  Identities=35%  Similarity=0.620  Sum_probs=168.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.++++++|+++|+||+||+||++|||++.|++.++++++ .++||.|+++++||||++++|+|+++|+           
T Consensus       189 ~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~-~~~gq~C~s~~~v~v~~~~~~~f~~~l~-----------  256 (367)
T cd06534         189 KAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAF-FNAGQICTAASRLLVHESIYDEFVEKLV-----------  256 (367)
T ss_pred             HHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHhhc-----------
Confidence            3466789999999999999999999999999999999999 9999999999999999999999998885           


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                                                                    ||+.+++++++++++|+|||+++|++|++.+|++
T Consensus       257 ----------------------------------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai  290 (367)
T cd06534         257 ----------------------------------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAI  290 (367)
T ss_pred             ----------------------------------------------eeeeCCCCCCccccCCccCceEEEEecCCHHHHH
Confidence                                                          6777788899999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      +++|+.++||+++|||+|.+.+++++.++++|+|+||+.+.+. .+.+||||.+.||+|+++|++++++|++.|++.
T Consensus       291 ~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         291 ALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             HHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            9999999999999999999999999999999999999987653 688999999999999999999999999999874

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=4.7e-39  Score=317.66  Aligned_cols=189  Identities=20%  Similarity=0.242  Sum_probs=161.0

Q ss_pred             CcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCccc
Q 023415            9 TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLS   88 (282)
Q Consensus         9 ~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~g   88 (282)
                      ||+++|||||||+||++|||++.|++.+..++|  ++||.|+|++|||||++++|+                        
T Consensus       498 ~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~--~~GQ~C~a~~rvlV~~~i~d~------------------------  551 (715)
T TIGR01092       498 IPVLGHADGICHVYVDKSASVDMAKRIVRDAKC--DYPAACNAMETLLVHKDLLRN------------------------  551 (715)
T ss_pred             CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhC--CCCCccccCcEEEEehhhccc------------------------
Confidence            999999999999999999999999866666655  559999999999999999985                        


Q ss_pred             ccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415           89 RIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG  167 (282)
Q Consensus        89 pli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~  167 (282)
                      |        .+.++++++. +|+++ +||...+  .|+.     ..+++|++++||+||||++|++|+|++|||+++|++
T Consensus       552 ~--------~~~~~v~~~~~~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~  615 (715)
T TIGR01092       552 G--------LLDDLIDMLRTEGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKH  615 (715)
T ss_pred             h--------hHHHHHHHHHHCCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcC
Confidence            0        1445666655 45666 5775432  2332     135689999999999999999999999999999999


Q ss_pred             CCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC----cchHHHHHHhhhccEEeEeC
Q 023415          168 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA----YHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       168 ~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~----~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +|||++||||+|.+++++|+.++++|.|+||+++.  ..+.+||||.+.||+|+    ++|++++++|++.|+|....
T Consensus       616 ~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~  691 (715)
T TIGR01092       616 GSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK  691 (715)
T ss_pred             CCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence            99999999999999999999999999999998753  34578999999999995    47999999999999987654

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=2.8e-39  Score=301.43  Aligned_cols=187  Identities=22%  Similarity=0.226  Sum_probs=168.3

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL   87 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~   87 (282)
                      ++|+++|+|||||+||++|||++.|++.+++++| +| ||.|+++++||||+++||+|+++|++++.+            
T Consensus       203 ~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~-~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~------------  268 (397)
T cd07077         203 HIPVIGFGAGNSPVVVDETADEERASGSVHDSKF-FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV------------  268 (397)
T ss_pred             CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhc-cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh------------
Confidence            4999999999999999999999999999999999 99 999999999999999999999999887764            


Q ss_pred             cccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH----HHHHH
Q 023415           88 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE----DSFDI  163 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~----eai~~  163 (282)
                                          .|++++.||.    ++++.||      ++|++.++|+||||++|++|+|++    +|+++
T Consensus       269 --------------------~G~~~~~g~~----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~  318 (397)
T cd07077         269 --------------------EGLKVPQETK----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMI  318 (397)
T ss_pred             --------------------cCcCcCCCce----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHH
Confidence                                3455555553    4577776      788999999999999999999996    66668


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCC--CCCCCCcch-HHHHHHhhhccEEe
Q 023415          164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ--ESGMGAYHG-KFSFDVFSHKKAVL  238 (282)
Q Consensus       164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~--~SG~G~~~g-~~~l~~~~~~k~v~  238 (282)
                      +|+++|||+++|||+|.++++++++++++|.|+||++..+.....+||||.+  .||+|+++| .+++++|++.|+|+
T Consensus       319 ~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         319 IESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             HHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            8999999999999999999999999999999999998765444678999999  899999999 99999999999875

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=4.8e-37  Score=285.06  Aligned_cols=190  Identities=21%  Similarity=0.203  Sum_probs=157.5

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      ..||+++|+|||||+||++|||+|.|++.+++++| .+ ||.|++++|+|||+++||+|+++|++++.++..       .
T Consensus       205 ~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~-~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~  275 (398)
T TIGR00407       205 STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKT-QR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------T  275 (398)
T ss_pred             CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhc-CC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------E
Confidence            56899999999999999999999999999999999 75 999999999999999999999999999987532       1


Q ss_pred             ccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415           87 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS  166 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~  166 (282)
                      +++      .+++++++..          |         .||++   ..++++++||+||||++|++|+|++|||+++|+
T Consensus       276 ~~~------~~~i~~~v~~----------g---------~~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~  327 (398)
T TIGR00407       276 IHA------DAYALKLLEL----------G---------PATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQ  327 (398)
T ss_pred             Eec------CHHHHHHHhc----------c---------Ccccc---ccccccccchhhCceeEEEEECCHHHHHHHHHH
Confidence            221      1344454431          1         13554   233789999999999999999999999999999


Q ss_pred             CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCC----CCCCCcchHHHHHHhhhcc
Q 023415          167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE----SGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~----SG~G~~~g~~~l~~~~~~k  235 (282)
                      .+|||+++|||+|.+++++|++++++|.|+||++..  ..+..|||=-..    ++.....|+.+++.|+..|
T Consensus       328 ~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~--~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       328 YGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTR--FTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             hCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCC--cCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            999999999999999999999999999999999764  345578873221    2445667999999988765

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=5.7e-36  Score=274.87  Aligned_cols=228  Identities=22%  Similarity=0.356  Sum_probs=207.1

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      ...|++.|.||.|.+|||++|--++++..++.|+| ..+||.|.+.+.+++++++.|+.++.|+-.+.+++.|+|. -++
T Consensus       341 ~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAF-dSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~t  419 (769)
T COG4230         341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTT  419 (769)
T ss_pred             CCCceEeccCCcceEEeechhhHHHHHHHHHHHHh-hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceec
Confidence            46899999999999999999999999999999999 9999999999999999999999999999999999999997 589


Q ss_pred             cccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeC--CHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDS  160 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~--~~~ea  160 (282)
                      |+||+|+.++.+.++++|+..+..++.++--..+   ..|.|+.||++.- + +..-++.|+|||||.|++|+  ++++.
T Consensus       420 DVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El-~-~~~eL~rEVFGPVLHVvRy~~~~l~~v  497 (769)
T COG4230         420 DVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIEL-E-NLDELQREVFGPVLHVVRYKRDELDEV  497 (769)
T ss_pred             cccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEc-C-CHHHHHHHhccceeEEEEecHHHHHHH
Confidence            9999999999999999999888777666543322   3699999999963 2 33447899999999999995  79999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEE
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v  237 (282)
                      |+-+|.++|||+.+|||+..+.+..+.+++++|.+|||...++....-+||||.+-||+| +-+|+..|..|...+..
T Consensus       498 i~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~  575 (769)
T COG4230         498 IDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW  575 (769)
T ss_pred             HHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence            999999999999999999999999999999999999999988888888999999999999 56899999999877653

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.75  E-value=3.6e-18  Score=153.63  Aligned_cols=193  Identities=16%  Similarity=0.231  Sum_probs=152.4

Q ss_pred             hhcC-CcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC---CC
Q 023415            5 AKHL-TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KN   80 (282)
Q Consensus         5 a~~~-~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~   80 (282)
                      .++- .||+--.-|+|.++|+++||+|+|.+-++.+++  ...-.|++.+.++||+.+.++|+..|.+.+.+.-+   +|
T Consensus       213 ~~~a~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKt--qrPs~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~d  290 (417)
T COG0014         213 VENATVPVIEHGVGNCHIYVDESADLDKALKIIVNAKT--QRPSVCNAAETLLVHRAIAKSFLPKLANALQEAGVELRGD  290 (417)
T ss_pred             HhCCcCCEEecCcceEEEEecccCCHHHHHHHHHcccC--CCCcccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEcC
Confidence            3443 566666669999999999999999999999999  44559999999999999999999999887774211   11


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           81 PLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        81 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                      +                .....+.               ..+          .+....-+..|...++++|-.+++.+||
T Consensus       291 ~----------------~~~~~~~---------------~~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~A  329 (417)
T COG0014         291 A----------------EALALLP---------------DAV----------KPATEEDWDTEYLDLILAVKVVDSLDEA  329 (417)
T ss_pred             H----------------HHHHhcc---------------ccC----------CCCchhhHHHHhhhheeEEEEeCCHHHH
Confidence            0                0111110               000          2223334678888999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCccc-CCCCC-CCCcchHHHHHHhhhccEEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG-VQESG-MGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG-~~~SG-~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |+++|..+.+||-+|.|+|.+.+++|...+++..|+||.++.+.....+.||. ++-|- ...-+|+.|++++|..|++.
T Consensus       330 I~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv  409 (417)
T COG0014         330 IAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIV  409 (417)
T ss_pred             HHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEE
Confidence            99999999999999999999999999999999999999988765556677777 45443 44667999999999999987


Q ss_pred             Ee
Q 023415          239 SR  240 (282)
Q Consensus       239 ~~  240 (282)
                      ..
T Consensus       410 ~G  411 (417)
T COG0014         410 RG  411 (417)
T ss_pred             eC
Confidence            54

>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]

Probab=99.58  E-value=6e-15  Score=113.79  Aligned_cols=145  Identities=23%  Similarity=0.282  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHhhccCCCCC-CCCcccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccCCCCceecceEEeeCCCCCc
Q 023415           62 APKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSL  138 (282)
Q Consensus        62 ~d~f~~~l~~~~~~~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~  138 (282)
                      ...+.+.|++..+.+++.+-. +.+|.     .+..+|+.++++...  .+..+-.-|  -+.+.|+.||++. +.|+|.
T Consensus         8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~--ya~~~f~~~tiLs-vtP~ms   79 (157)
T KOG2449|consen    8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG--YAEGNFVGPTILS-VTPNMS   79 (157)
T ss_pred             hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec--cccCCcccceEEE-ecCCcc
Confidence            456667777888887765543 45555     567788999887521  111222222  2468899999998 999999


Q ss_pred             ccccccccceeeEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCC
Q 023415          139 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ  215 (282)
Q Consensus       139 i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~  215 (282)
                      +..||+||||+..+.-++++|+|.++|+++||-...|||.+.+.++.+....++|.|.+|.+.. ...+...|.|-+
T Consensus        80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip-~ilk~~sfsg~~  155 (157)
T KOG2449|consen   80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP-VILKMFSFSGDR  155 (157)
T ss_pred             eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc-ccccceeccccC
Confidence            9999999999999999999999999999999999999999999999999999999999998753 355666666643

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.49  E-value=9.7e-13  Score=123.79  Aligned_cols=163  Identities=17%  Similarity=0.184  Sum_probs=111.4

Q ss_pred             cEEEeCCCC-CceEEcCCC----CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCc---HHHHHHHHHHHHhhccCCCC
Q 023415           10 PVLLELGGK-SPVVFDSGI----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY---APKLLESLKNELENFYGKNP   81 (282)
Q Consensus        10 ~~~lElgG~-np~iV~~dA----Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.++|+||| +++|++++|    |++.+++.++++++ .++||.|+|+++||||+++   +++|.++|.++++++....|
T Consensus       217 ~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~-~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p  295 (422)
T cd07080         217 CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDIC-RYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYP  295 (422)
T ss_pred             CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHH-HHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence            569999999 556666668    99999999999999 9999999999999999999   99999999999998754333


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                      ..     ++ +.....++...-..+. .+.+....   ...+    -+|+.+-.+.  +.. ...+=.+.|.++++++|+
T Consensus       296 ~~-----~~-~~~~~~~~~~~r~~~~~~~~~~~~~---~~~~----~~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~  359 (422)
T cd07080         296 AL-----SL-SAAESAKIARARLEAEFYELKGGVS---RDLG----WTVIISDEIG--LEA-SPLNRTVNVKPVASLDDV  359 (422)
T ss_pred             CC-----CC-CHHHHHHHHHHHHHHHHHHHhcCCC---CCCC----eEEEEeCCCC--ccC-CCCcCEEEEEEcchHHHH
Confidence            21     11 3333333333222211 11111111   0111    1344322222  211 344568889999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhccc
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSA  192 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~  192 (282)
                      +..++.  +=.|.+++..+.+. .++++++..
T Consensus       360 l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~  388 (422)
T cd07080         360 LRPVTP--YLQTVGLAPSPAEL-AELADALAA  388 (422)
T ss_pred             HHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence            999985  66799999988887 777777653

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=99.47  E-value=1.1e-12  Score=110.17  Aligned_cols=165  Identities=10%  Similarity=0.140  Sum_probs=125.1

Q ss_pred             CceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 023415           19 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFAR   98 (282)
Q Consensus        19 np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~   98 (282)
                      .-+||++|.|++.|+..++.+   .+..-...+...|+|||++.|+|+++++.+++.+...          +.+...+.|
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~s---l~~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~~~----------va~Hpny~r   72 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLES---LHNPFAPGAVATVLVQESIREEFIERVRSRMKPLSPQ----------VANHPNYLR   72 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHH---HhCcccCCcEEEEEEeHHHHHHHHHHHHHhCccCChh----------hccCcHHHH
Confidence            347999999999999999999   4455556688899999999999999999988765311          233345555


Q ss_pred             HHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC--CCCceEEEe
Q 023415           99 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG--TKPLAAYLF  176 (282)
Q Consensus        99 i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gL~a~i~  176 (282)
                      -.+.++  .-+++++.+.... .-..-.|.++.+++...  +-+ --.+|+++.+|++..||++++++.  +++ +.+||
T Consensus        73 sl~~i~--~l~~~~I~~~~~~-~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW  145 (215)
T PF07368_consen   73 SLKKIK--CLNAKTIVADFEN-VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIW  145 (215)
T ss_pred             HHHHHH--hcCCeEEEecccC-CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEe
Confidence            555554  3467777774321 11233699998776542  222 233799999999999999999974  444 99999


Q ss_pred             cCCHHHHHHHHhhcccceEEECCCCcc
Q 023415          177 TNNKKLKQQFVETVSAGGLVINDTAVH  203 (282)
Q Consensus       177 t~d~~~~~~~~~~l~~g~v~iN~~~~~  203 (282)
                      ++..+.+.+++.++++..++||+....
T Consensus       146 ~ekla~~Yel~~~l~~~~f~iNC~~V~  172 (215)
T PF07368_consen  146 NEKLASAYELAARLPCDTFYINCFNVD  172 (215)
T ss_pred             CcHHHHHHHHHHhCCCCEEEEEeccCC
Confidence            999999999999999999999998664

The function of this family is unknown.

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.31  E-value=5.2e-12  Score=110.93  Aligned_cols=189  Identities=21%  Similarity=0.252  Sum_probs=140.5

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCc-HHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      -+||..--.|.+.++|++|||+++|.+-+..++.  +..-.|++.+.+++|++. ...|.+.+...+.            
T Consensus       212 kIPVLGHA~GichvYvd~dad~~kA~riv~DaK~--dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~------------  277 (433)
T KOG4165|consen  212 KIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKC--DYPAACNAMETLLIHKDLEQSPFFDDLINMLK------------  277 (433)
T ss_pred             cCcccccccceeEEEeccccCHHHHHHHHhcccC--CCchhhhhHHHHhccHhhhhcchHHHHHHHHH------------
Confidence            4788888899999999999999999988888887  777799999999999973 2334444333222            


Q ss_pred             ccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                                           .++..+++|.+.. -..+-        +++..-++.|.-.-.+++-.+++.++||+.+|
T Consensus       278 ---------------------~~gVtl~agpkl~~~l~~~--------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~  328 (433)
T KOG4165|consen  278 ---------------------EEGVTLHAGPKLAALLKFS--------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIH  328 (433)
T ss_pred             ---------------------hcCeEEecChhHHhhcCcC--------CchhhhhhhhhcchheeeeecccHHHHHHHHH
Confidence                                 2333344444311 11111        34445577887778899999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCC--C--CcchHHHHHHhhhccEEeEeC
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--G--AYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G--~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      ..+.+|+-+|.|+|...+++|...+++..|+.|.++.+  ..+.-||=-..-|+  +  ..+|+-|++-++..|++....
T Consensus       329 ~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRF--aDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~  406 (433)
T KOG4165|consen  329 THGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRF--ADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK  406 (433)
T ss_pred             hcCCcccceEEecCHHHHHHHHhccchhheeecccccc--cccccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence            99999999999999999999999999999999998653  34444443222232  3  345899999999999877554

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=97.76  E-value=0.0048  Score=57.87  Aligned_cols=189  Identities=16%  Similarity=0.204  Sum_probs=110.4

Q ss_pred             CCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEe---CCcHHHHHHHHHHHHhhccCCCCCCCCcccccCCH
Q 023415           17 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT---KDYAPKLLESLKNELENFYGKNPLESKDLSRIVNS   93 (282)
Q Consensus        17 G~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~---~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~   93 (282)
                      =.+-++|+.+++++.+++.++.-.+ ....|.|.|++.|||.   +.-.++|.++|.+.+++....-|..      ..+.
T Consensus       200 k~S~avi~~~~~~~~~a~~~a~Di~-~~dQ~aCsSp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~------~~s~  272 (399)
T PF05893_consen  200 KYSFAVIDAEAELEEAARRLANDIF-LFDQQACSSPQVIFVETGDGDSVEEFAERLAEALERAAERYPRG------ELSI  272 (399)
T ss_pred             ceEEEEEcCchhHHHHHHHHHHHHH-HhhCcccCCCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc------CCCH
Confidence            4566778888899999999999999 9999999999999999   3446788888877777653221211      1122


Q ss_pred             HHHHHHHHHHHH-----HHhcC-eEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415           94 NHFARLSKLLDD-----DKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG  167 (282)
Q Consensus        94 ~~~~~i~~~i~~-----a~~~~-~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~  167 (282)
                      .....+....+.     +..+. ++. ++.   .+   .-||+....+  . .....++=.+.|.++++.+|++..++..
T Consensus       273 ~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~---~~---~~~V~~~~~~--~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~  342 (399)
T PF05893_consen  273 DEAAAISSLRAEAELRYALDGEYRVW-SSD---DN---SWTVIVSPEP--P-LLPSPLNRTVYVVPVDSLEELVPYLRPK  342 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCccee-ecC---CC---CEEEEECCCc--c-cccCCCCCEEEEEEcCCHHHHHHHhhhc
Confidence            222222222222     22333 333 222   11   2245443221  2 2233345588999999999999999876


Q ss_pred             CCCceEEEecCCHHHHHHHHh-hcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 023415          168 TKPLAAYLFTNNKKLKQQFVE-TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH  233 (282)
Q Consensus       168 ~~gL~a~i~t~d~~~~~~~~~-~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~  233 (282)
                      ..=.|.+++... ....+++. -...|.-.|=....   ....      ..| +.+.|.+.|..|++
T Consensus       343 ~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv~~G~---m~~~------~~g-~~hDG~~~L~~lvR  398 (399)
T PF05893_consen  343 RGLQTVGIYPWS-ERLEELARALAAAGVDRIVPLGQ---MLDF------DPG-WPHDGMYPLRRLVR  398 (399)
T ss_pred             CCCeeEEEecCh-hhHHHHHHHHHhcCCeeeCCCCc---CCCC------CCC-CCcCCHhHHHHHhC
Confidence            322578887654 45556655 33445433322110   0011      111 24557788888765

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=87.70  E-value=8.9  Score=36.10  Aligned_cols=79  Identities=24%  Similarity=0.454  Sum_probs=43.5

Q ss_pred             eEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ccceEEECCCCcc-------cCCCCCCcccCCCCCCCC
Q 023415          150 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGA  221 (282)
Q Consensus       150 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l-~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~  221 (282)
                      .++.++|++||++++|.-- +--..|.++|+.   .+..++ .+|.|++...+.-       ..++-+|.+|     ..+
T Consensus       290 ~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR  360 (412)
T PF00815_consen  290 AIIVVDSLEEAIELANEYA-PEHLELQVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTGG-----TAR  360 (412)
T ss_dssp             EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS------TT-----GGG
T ss_pred             eEEEECCHHHHHHHHHHhh-HHHHHHHHcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCCc-----ccc
Confidence            4556799999999999821 235688888884   455555 4899999975421       1345566554     456


Q ss_pred             cchHHHHHHhhhccEE
Q 023415          222 YHGKFSFDVFSHKKAV  237 (282)
Q Consensus       222 ~~g~~~l~~~~~~k~v  237 (282)
                      +.+..+...|+...++
T Consensus       361 ~~sgLsv~~FlK~~s~  376 (412)
T PF00815_consen  361 FSSGLSVDDFLKRISV  376 (412)
T ss_dssp             T---S-GGGGEEEEEE
T ss_pred             ccCCCcHHHccceeeE
Confidence            6666677777655443

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=86.33  E-value=12  Score=35.30  Aligned_cols=77  Identities=23%  Similarity=0.381  Sum_probs=49.2

Q ss_pred             eEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ccceEEECCCCccc-------CCCCCCcccCCCCCCCC
Q 023415          150 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGA  221 (282)
Q Consensus       150 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~G~  221 (282)
                      .|+.++|++|+++++|.-- +--.-|.++|+..   ++.++ .+|.|+++.++.-.       .++-+|.     +|+-+
T Consensus       300 ~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR  370 (425)
T COG0141         300 AIILVDDLDEAVEISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPT-----SGTAR  370 (425)
T ss_pred             eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCCccccccccCCCccCCC-----Cccch
Confidence            4566799999999999731 2345788888764   44555 48999999854311       2333343     44555


Q ss_pred             cchHHHHHHhhhcc
Q 023415          222 YHGKFSFDVFSHKK  235 (282)
Q Consensus       222 ~~g~~~l~~~~~~k  235 (282)
                      +.+..++..|...-
T Consensus       371 ~~s~L~v~dF~K~~  384 (425)
T COG0141         371 FSSGLSVYDFLKRS  384 (425)
T ss_pred             hcCCccHHHhhhHH
Confidence            66666677775543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	282
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		9e-64
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		5e-62
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		3e-34
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		7e-33
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-22
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		1e-21
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		5e-21
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		1e-20
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		1e-18
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-18
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-18
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		5e-18
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		6e-18
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		2e-17
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		3e-17
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		5e-17
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		6e-17
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		6e-17
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		6e-17
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		1e-16
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		3e-16
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		5e-16
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		5e-16
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		6e-16
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		6e-16
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		6e-16
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		1e-15
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		1e-15
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		1e-15
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		1e-15
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-15
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		2e-15
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		4e-15
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		5e-15
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		5e-15
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		8e-15
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		1e-14
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		1e-14
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		2e-14
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		4e-14
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		7e-14
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		9e-14
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		1e-13
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		3e-13
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		3e-13
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		5e-13
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		5e-13
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		1e-12
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		1e-12
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		1e-12
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		2e-12
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-12
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		2e-12
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		5e-12
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		5e-12
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-11
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-11
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		5e-11
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		7e-11
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		9e-11
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		1e-10
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		2e-10
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		2e-09
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-09
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-09
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-09
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		5e-09
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		5e-09
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		2e-08
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		5e-08
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		1e-07
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		1e-07
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		3e-07
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		4e-07
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		8e-07
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		2e-06
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		3e-05
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		5e-05
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		7e-04

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score =  239 bits (611), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 117/254 (46%), Positives = 163/254 (64%), Gaps = 7/254 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 196 MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 254
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                          FYG++  +S+D  RI+N  HF R+  L+D+ KV+    HGG  D+
Sbjct: 255 IQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA----HGGTWDQ 310
Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPLA Y+F+NN+
Sbjct: 311 SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNE 370
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ FSH+++ L +
Sbjct: 371 KVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 430
Query: 241 GFIGDVP--VRYPP 252
             + +     RYPP
Sbjct: 431 SLLNEEAHKARYPP 444

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score =  234 bits (596), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 116/254 (45%), Positives = 161/254 (63%), Gaps = 7/254 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 213 MTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 271
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                          FYG++  +S+D  RI+++ HF R+  L++  KV+    +GG  D 
Sbjct: 272 IQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA----YGGTGDA 327
Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               IAPT+L DV   S +M EEIFGP+LPI+ V  +E++   IN   KPLA Y+F++N 
Sbjct: 328 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSND 387
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ +HSLPFGGV  SGMG+YHGK SF+ FSH+++ L R
Sbjct: 388 KVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 447
Query: 241 GFIGD--VPVRYPP 252
             + D  + VRYPP
Sbjct: 448 PLMNDEGLKVRYPP 461

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 10/239 (4%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV+LELGGK P++     +L     +++ GK+  N+GQ CI+PD++     
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTCIAPDYL----- 276
Query: 61  YAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
           Y                 K  L E     ++V      RL  LL+     G+++ G + D
Sbjct: 277 YVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQAD 334
Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTN 178
            +K  ++ T++  V  +  +MSEE+FGP+LP+L  D +  + D +N    KPLA Y+F  
Sbjct: 335 VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGK 394
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +  + +  +  + +G   +N   +H     LPFGG+  SGMG YHG FS+  F+HKK+V
Sbjct: 395 DMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  137 bits (345), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV+LELGGK P++     +L     +++ GK+  N+GQ  I+PD++     
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIAPDYL----- 276
Query: 61  YAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
           Y                 K  L E     ++V      RL  LL+     G+++ G + D
Sbjct: 277 YVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQAD 334
Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTN 178
            +K  ++ T++  V  +  +MSEE+FGP+LP+L  D +  + D +N    KPLA Y+F  
Sbjct: 335 VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGK 394
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +  + +  +  + +G   +N   +H     LPFGG+  SGMG YHG FS+  F+HKK+V
Sbjct: 395 DMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 9/243 (3%)
Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M AAA+ + PV LELGGKSP VVFD   NL +A    + G +  N GQ C +   +I  +
Sbjct: 260 MTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQE 318
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
           + A                 +PLE    L  +V++  + ++ K + + K  G  I+ GGE
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R    K    + PT++ DV     I  EE+FGP+L + T    E + ++ N     L A 
Sbjct: 379 RPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + + + K  ++F +    G + IN        + LP+GG + SG G   GK+  + F + 
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNI 496
Query: 235 KAV 237
           K V
Sbjct: 497 KQV 499

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M AAA+ + PV L LGGKSP VVFD   NL +A    + G +  N GQ C +   +I  +
Sbjct: 260 MTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQE 318
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
           + A                 +PLE    L  +V++  + ++ K + + K  G  I+ GGE
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R    K    + PT++ DV     I  EE+FGP+L + T    E + ++ N     L A 
Sbjct: 379 RPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + + + K  ++F +    G + IN        + LP+GG + SG G   GK+  + F + 
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNI 496
Query: 235 KAV 237
           K V
Sbjct: 497 KQV 499

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 11  VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXX 70
           + LELGG +P +     +L  A   +I G +    GQ CIS   I+  +  A        
Sbjct: 238 IALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFV 296
Query: 71  XXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPT 128
                    NPL+ K D+  +++  H   + K+++      GK++ GG+RDK      PT
Sbjct: 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK--ALFYPT 354
Query: 129 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 188
           +L +V RD+++   E F P++PI+  ++ E+  DI NS    L + +FTN+     +F E
Sbjct: 355 IL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAE 412
Query: 189 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
            +  GG+VIND+++     ++PFGGV++SG+G    K++ +  S+ K ++
Sbjct: 413 NLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTK 59
           M AAA+ + PV LELGGKSP+V    ++L  A    I G  W   NGQ C +   +I  +
Sbjct: 247 MTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFW--TNGQICSATSRLILHE 304
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A                 +PLE    L  +V+   + ++ K + + K  G  I+ GG 
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS 364
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R    K    I PT++ DV  +  I  EE+FGP+L + T    E++ D+ N     L A 
Sbjct: 365 RPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAA 424
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + +N+ +  ++  +   AG + +N +         P+GGV+ SG G   G++  D +   
Sbjct: 425 VISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482
Query: 235 KAVLSRGFIGDVPVRY--PP 252
           K V    +I + P  +  PP
Sbjct: 483 KQVTQ--YISEEPWGWYQPP 500

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MA AAK++T V LELGGK+P +     +L++A + ++  +   N+GQ C   + +   K 
Sbjct: 238 MATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQKG 296
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                              NP E  D++   ++N+    R+ + +      G ++  GG+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             + K     PTLLLDV ++  IM EE FGP+LP++  D +ED+  + N     L + ++
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIY 416
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T N  +  + ++ +  G   IN      A+      G ++SG+G   GK     +   + 
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 237 V 237
           V
Sbjct: 475 V 475

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MA AAK++T V LELGGK+P +     +L++A + ++  +   N+GQ C   + +   K 
Sbjct: 238 MATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQKG 296
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLS-KLLDDDKVSGKIVHGGE 117
                              NP E  D++   ++N+    R+  K+    +   ++  GG+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             + K     PTLLLDV ++  IM EE FGP+LP++  D +ED+  + N     L + ++
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIY 416
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T N  +  + ++ +  G   IN      A+      G ++SG+G   GK     +   + 
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 237 V 237
           V
Sbjct: 475 V 475

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MA+AA+ + PV LELGGKSP+V    +++       I G +   NGQ C +   ++  + 
Sbjct: 244 MASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFW-TNGQICSATSRLLVHES 302
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
            A                 +P E    L  +++   + ++ K +   K  G  I++GG R
Sbjct: 303 IAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSR 362
Query: 119 D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
               K    I PT++ D+     I  EE+FGP+L + T    +++  + N     LAA +
Sbjct: 363 PEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAV 422
Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
           F+N+ +  ++  + +  G + +N +         P+GG++ SG G   G++    + + K
Sbjct: 423 FSNDLERCERITKALEVGAVWVNCS--QPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIK 480
Query: 236 AV 237
            V
Sbjct: 481 QV 482

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 12/253 (4%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTK 59
           MA+AA  + PV LELGGKSP+V    +++  A    + G  W   NGQ C +   ++   
Sbjct: 264 MASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFW--TNGQICSATSRLLIHT 321
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A                 +PLE    L  +V+   + ++ K + + K  G  I+ GG 
Sbjct: 322 KIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGV 381
Query: 118 RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R    +    I PT++ D+     I  EE+FGP+L +      +++ ++ N     LA  
Sbjct: 382 RPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGA 441
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + + +++  Q+  E + AG + +N           P+GG + SG G   G+   D +   
Sbjct: 442 VISGDRERCQRLSEEIDAGCIWVN--CSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSV 499
Query: 235 KAVLSRGFIGDVP 247
           K V    +I D P
Sbjct: 500 KQVTE--YISDEP 510

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MA AAK++T V LELGGK+P +     +L++A + ++  +   N+GQ C   + +   K 
Sbjct: 238 MATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQKG 296
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLS-KLLDDDKVSGKIVHGGE 117
                              NP E  D++   ++N+    R+  K+    +   ++  GG+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGK 356
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             + K     PTLLLDV ++  IM EE FGP+LP++  D +E++  + N     L + ++
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIY 416
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T N  +  + ++ +  G   IN      A+      G ++SG+G   GK     +   + 
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQV 474
Query: 237 V 237
           V
Sbjct: 475 V 475

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 16/261 (6%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITT 58
           M  AA+ + PV LELGGKSP+V    ++L       + G   C   NGQ C +   +I  
Sbjct: 247 MTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFG---CFFTNGQICSATSRLIVH 303
Query: 59  KDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE 117
           +  A                 +PLE    L  IV+   + ++   +   K  G  +  G 
Sbjct: 304 ESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGG 363
Query: 118 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
           R    L+    + PT++ DV     I  EE+FGP+L + T    E++ ++ N     L +
Sbjct: 364 RRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGS 423
Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
            + +N+ +  ++  + + AG + IN      +    P+GG++ SG G   G++  + +  
Sbjct: 424 AVMSNDLERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLS 481
Query: 234 KKAVLSRGFIGDVPVRY--PP 252
            K V    +  D P  +  PP
Sbjct: 482 VKQVTR--YTSDEPWGWYQPP 500

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
           +A+++TPV+LELGGK+P+V     +L  A    + G++  N GQ C   + +        
Sbjct: 247 SAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYD 305
Query: 64  XXXXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG------ 116
                           +P+++   +    N      +  ++ +    G  V  G      
Sbjct: 306 EFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV 365
Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           E  +      PT+L+DV +D++++ EE FGP+LPI+ V  +E + +  N     L+AY+ 
Sbjct: 366 EGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVH 425
Query: 177 TNNKKLKQQFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           T +     Q +  +  G + IN      H   H+    G ++SG G   GKF  + +  K
Sbjct: 426 TQSFANINQAISDLEVGEVYINRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEK 481
Query: 235 KAV 237
           K V
Sbjct: 482 KTV 484

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
           AAK    V LELGGKSP +    +++K A +    GK   N GQ C +   ++       
Sbjct: 238 AAKDFKKVSLELGGKSPYIVLDDVDIKEAAK-ATTGKVVNNTGQVCTAGTRVLVPNKIKD 296
Query: 64  XXXXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN 121
                           NP E    +  I++   F ++   ++     G ++ +GG     
Sbjct: 297 AFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPE 356
Query: 122 KLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            L       PT+ ++V     I  EEIFGP+  ++T + ++++  I N     LA Y+  
Sbjct: 357 GLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIG 416
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +K+   +   ++ AG + IN+         LPFGG ++SG+G   G +  + F   K++
Sbjct: 417 KDKETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M  +AK +  V LELGGKSP++      L+ A R  +M  +    GQ C +   +   ++
Sbjct: 250 MEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQRE 308
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE- 117
             P                +PL ++  +  +++     ++   +   K  G +++ GGE 
Sbjct: 309 IMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEP 368
Query: 118 ------RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
                 + KN   ++P +L +   D   + EEIFGP++ +L  D  E+     N+ T  L
Sbjct: 369 LTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +     +    + AG   IN  ++      +PFGG + SG G  +G+ + D +
Sbjct: 429 ASGVFTRDISRAHRVAANLEAGTCYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYY 486
Query: 232 SHKKAVLSRGFIGDV 246
           S  K V+    +GDV
Sbjct: 487 SQLKTVIVE--MGDV 499

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 3/231 (1%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           + P++LELGGK   +     +L++  + +I G +G + GQ C +   ++  +  A     
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVE 302
Query: 68  XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
                       NP +  D++ ++++     +  L++D    G       + +  L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
            L   V  D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN+        
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           E +  G + IN+        + PF G ++SG G    K+S +  +  K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 3/231 (1%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           + P++LELGGK   +     +L++  + +I G +G + GQ C +   ++  +  A     
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVE 302
Query: 68  XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
                       NP +  D++ ++++     +  L++D    G       + +  L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
            L   V  D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN+        
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           E +  G + IN+        + PF G ++SG G    K+S +  +  K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 7   HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXX 66
           HL  V++E+GGK  VV D   +L +A   +++  +G + GQ C +    +  KD      
Sbjct: 280 HLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFS-GQKCSAGSRAVIHKDVYDEVL 338
Query: 67  XXXXXXXXXFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LR 124
                        +P    + +  +++   F ++   ++  K  G+++ GGE D +    
Sbjct: 339 EKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFF 398
Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
           I PT++ D+  +++IM EEIFGP++     +  + + +I N+    L   + T N+   +
Sbjct: 399 IQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIE 458
Query: 185 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
           Q       G L  N       V   PFGG + SG  +  G
Sbjct: 459 QAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 3/231 (1%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           + P++L LGGK   +     +L++  + +I G +G + GQ C +   ++  +  A     
Sbjct: 244 MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVE 302
Query: 68  XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
                       NP +  D++ ++++     +  L++D    G       + +  L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
            L   V  D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN+        
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           E +  G + IN+        + PF G ++SG G    K+S +  +  K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ C +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGQELGEYGLQAYTEVKTV 491

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 9/240 (3%)
Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YA 62
           AA+ L P  LELGGKS  +    ++L  A   M+      N GQ C++   I+  +  Y 
Sbjct: 244 AAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYD 302
Query: 63  PXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK- 120
                          G     +  +  +++     R+   +      G ++V GG R + 
Sbjct: 303 EIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG 362
Query: 121 --NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
             N   I PT+  DV     I  EEIFGP+L I+  D  ED+  I N     LA  ++T 
Sbjct: 363 LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTT 422
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           +     +  + +  G   IN  A        PFGG + SG+G  +G    + F+ +K+VL
Sbjct: 423 DVPKGIKISQQIRTGTYGINWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ C +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ C +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ C +       +D
Sbjct: 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 307
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 368 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 427
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 428 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 485

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 3/231 (1%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           + P++LELGGK   +     +L++  + +I G +G + GQ   +   ++  +  A     
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYS-GQRSTAVKRVLVMESVADELVE 302
Query: 68  XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
                       NP +  D++ ++++     +  L++D    G       + +  L I P
Sbjct: 303 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICP 361
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
            L   V  D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN+        
Sbjct: 362 ILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIA 421
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           E +  G + IN+        + PF G ++SG G    K+S +  +  K+V+
Sbjct: 422 EQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 13  LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 71
           +E GGK+ ++ D   +  +A   +++  +G   GQ C +   +I T+  Y P        
Sbjct: 287 VETGGKNAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 72  XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLL 130
                 G    E+ DL  +V++    ++   ++  K  G++V GG+R +     IAPT+ 
Sbjct: 346 AERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVF 404
Query: 131 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 190
            +VP  + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +      
Sbjct: 405 TEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREF 464
Query: 191 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 240
             G L  N       V   PFGG + SG  A  G   +  +F   KAV  R
Sbjct: 465 HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 63
           AA+ +  V LELGGK P +  +  +L  A   +  G +  N GQ CIS   ++  +    
Sbjct: 260 AARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRD 318
Query: 64  XXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--D 119
                           +PL E   +   ++  H  ++   +     SG +++ GGER   
Sbjct: 319 ALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGR 378
Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
           +  L  APT+   V  D  I  EEIFGP+L  LT    +++  + N+    L+A +++ N
Sbjct: 379 EAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTN 438
Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +   Q +  + AG   IN  +V      LP GG ++SG+G   G++ FD +S  K V
Sbjct: 439 LETALQTIRRIRAGRCWIN--SVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 5/231 (2%)
Query: 13  LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXX 71
           +E GGK  ++ D   +  +A   +++  +G   GQ C +   +I T+  Y P        
Sbjct: 287 VETGGKDAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 72  XXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLL 130
                 G    E+ DL  +V++    ++   ++  K  G++V GG+R +     IAPT+ 
Sbjct: 346 AERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVF 404
Query: 131 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 190
            +VP  + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +      
Sbjct: 405 TEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREF 464
Query: 191 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 240
             G L  N       V   PFGG + SG  A  G   +  +F   KAV  R
Sbjct: 465 HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           AAAA HL  V +ELGGKSP++     +++ A    ++G +  ++GQ C +   +   K  
Sbjct: 246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKA 304
Query: 62  APXXXXXXXXXXXXFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
                             +PL+ +  L  +V+     ++   ++  K  G  ++ GG   
Sbjct: 305 KARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIP 364
Query: 120 KN----KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
            N       + PT+  DV  D  I  EEIFGP++ +L  D  ++     N+    LA  +
Sbjct: 365 NNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGV 424
Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
           FT +     + V+ + AG L IN    +L    +PFGG ++SG G  +   + + +S  K
Sbjct: 425 FTADLARAHRVVDGLEAGTLWIN--TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482
Query: 236 AV 237
            V
Sbjct: 483 TV 484

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V L+LGGKSP +  S  ++  A  +     +  N GQ+C +       +D
Sbjct: 255 VAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQSCSAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           + PV+LELGGK P +     +LK+   +++ G +  + GQ C +   +      A     
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYS-GQRCTAIKRVFVQDSVADQLVA 311
Query: 68  XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 127
                       +P +  D++ +++    A +  L+DD   +G  +  G + +  L ++P
Sbjct: 312 NIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSP 370
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
           TLL DV     +  EE FGP+LPI+ V    ++  + N     L A +FT +        
Sbjct: 371 TLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIG 430
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
           + +  G + IN        H  PF GV++SG+G
Sbjct: 431 KHLEVGTVHINAKTERGPDH-FPFLGVKKSGLG 462

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 13  LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXX 72
           +E GGK  ++ D   +  +A   +++  +G    +   +   I+T   Y P         
Sbjct: 287 VETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRA 346
Query: 73  XXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLL 131
                G    E+ DL  +V++    ++   ++  K  G++V GG+R +     IAPT+  
Sbjct: 347 ERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFT 405
Query: 132 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 191
           +VP  + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +       
Sbjct: 406 EVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFH 465
Query: 192 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 240
            G L  N       V   PFGG + SG  A  G   +  +F   KAV  R
Sbjct: 466 VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ C +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
            +        + + AG + +N   V  A    PFGG + SG G   G++    +
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAY 485

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
Query: 4   AAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY- 61
           AA  +  V +ELGG +P +VFDS  N+  A    +  K+  N GQ C+  +  +  +   
Sbjct: 248 AANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIH 305
Query: 62  -APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
            A               G    E      ++N     ++ K ++D    G  +V GG+R 
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 120 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
           +  K    PTLL +V +D L   EE FGPL P++  D  E++  I N+    LA Y ++ 
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           +     +  E +  G + +N+  +       PFGGV++SG+G    K+  D +   K V 
Sbjct: 426 DPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483
Query: 239 SRGF 242
             G 
Sbjct: 484 YGGL 487

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ   +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ   +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCXCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 8/244 (3%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA   +L  V LE+GGKSP +  S  ++  A  +     +  N GQ C +       +D
Sbjct: 254 VAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCCCAGSRTFVQED 312
Query: 61  -YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
            YA               G NP +S+ +    V+   F ++   +   K  G K++ GG 
Sbjct: 313 IYAEFVERSVARAKSRVVG-NPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGG 371
Query: 118 RDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
              ++   I PT+  D+     I  EEIFGP++ IL    +E+     N+    LAA +F
Sbjct: 372 AAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVF 431
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K 
Sbjct: 432 TKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKLSGSGRELGEYGLQAYTEVKT 489
Query: 237 VLSR 240
           V  R
Sbjct: 490 VTVR 493

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 11/224 (4%)
Query: 7   HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXX 65
           HL  V+ E+GGK  VV D   ++++A + +    +G   GQ C +    ++  K Y    
Sbjct: 280 HLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFA-GQKCSAGSRAVVHEKVYDEVL 338
Query: 66  XXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LR 124
                       G+       +  +++   F ++   ++  K  G++V GG+ D +K   
Sbjct: 339 KRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYF 398
Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK---- 180
           I PT+  D+   + +M EEIFGP++    V   +++ ++ N+    L   + T N+    
Sbjct: 399 IEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHIN 458
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
           + KQ+F      G L  N       V   PFGG + SG  +  G
Sbjct: 459 RAKQEF----HVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           AA   +L  V LELGGKSP +  +  +L  A      G +  + GQ CI+   +   +  
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESI 315
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
                         +   NPL +  +S+   ++   + ++  L++  K  G K+  GG  
Sbjct: 316 YDEFVRRSVERAKKYVLGNPL-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP 374
Query: 119 DKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
             NK   I PT+  DV  D  I  EEIFGP+  I+    ++D     N+    L+A +FT
Sbjct: 375 WGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFT 434
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           N+          + +G + +N  +V  A    PFGG + SG G   G++ F  ++  K V
Sbjct: 435 NDIDKAITVSSALQSGTVWVNCYSVVSA--QCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 6/234 (2%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +  N GQ   +       +D
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQED 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGE 117
                              NP +SK +    V+   F ++   ++  K  G   +  GG 
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                  I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
            +        + + AG + +N   V  A    PFGG + SG G   G++    +
Sbjct: 434 KDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAY 485

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 4   AAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY- 61
           AA  +  V +ELGG +P +VFDS  N+  A    +  K+  N GQ  +  +  +  +   
Sbjct: 248 AANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQFLVQRGIH 305
Query: 62  -APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
            A               G    E      ++N     ++ K ++D    G  +V GG+R 
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 120 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
           +  K    PTLL +V +D L   EE FGPL P++  D  E++  I N+    LA Y ++ 
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           +     +  E +  G + +N+  +       PFGGV++SG+G    K+  D +   K V 
Sbjct: 426 DPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483
Query: 239 SRGF 242
             G 
Sbjct: 484 YGGL 487

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 10/242 (4%)
Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDY 61
           AA+   P  LELGGK P +     NL++A   ++   WG   N GQ+C+S + I   +  
Sbjct: 222 AARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAESK 278
Query: 62  APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG---E 117
                              PL E   +  I+       ++  + D    G ++H G   E
Sbjct: 279 FEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE 338
Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                    PT+  +V     + +EE FGP+ P+     +E++  + N     L+A +F 
Sbjct: 339 ELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFA 398
Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKKA 236
            ++    +    ++AG + IND A+    H         SG+G    G      F  K+A
Sbjct: 399 GSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458
Query: 237 VL 238
            L
Sbjct: 459 FL 460

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  AA ++T + LELGGK+P ++FD   + ++A  + + G +  + GQ C +   I+   
Sbjct: 266 MKNAANNVTNIALELGGKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQN 323
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                               N  ++  ++  ++++ H  ++   +D  K  G  I  GG+
Sbjct: 324 SIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383
Query: 118 R-DKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
           R D++ L+      PT++ +      I+ EE+FGP++ +   +  +++  + N     LA
Sbjct: 384 RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLA 443
Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
             +F+ +    Q+    +  G + IND   H      P+GG ++SG+G   GK   + + 
Sbjct: 444 GAVFSKDIGKAQRVANKLKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYL 501
Query: 233 HKKAVLS 239
             K +L+
Sbjct: 502 VSKHILT 508

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 8/235 (3%)
Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI-ITT 58
           MA +A  +  + LELGG +P +VFD   +L  A    I  K+  NNGQ C+  +   +  
Sbjct: 244 MAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKYR-NNGQTCVCTNRFFVHE 301
Query: 59  KDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
           + Y                G+       L  ++N     ++   + D    G  ++ GG+
Sbjct: 302 RVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGK 361
Query: 118 RDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R         PT+L  V  D  +  EE FGPL P+      E+   + N     LAAYL+
Sbjct: 362 RHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLY 421
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           + +     +  E +  G + IN   +   V   PFGGV++SG+G     +  D +
Sbjct: 422 SRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 18/247 (7%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MA  A  +  + LELGG +P +     +L  A    ++ K+  N GQ C+  + I   + 
Sbjct: 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRG 322
Query: 61  -YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
            Y                G        +  ++      ++   ++D    G K++ GG +
Sbjct: 323 VYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG-K 381
Query: 119 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
           +   L   P +L  V  D L+  EE FGPL P+   D  E+     N     LAAY +T 
Sbjct: 382 ELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTE 441
Query: 179 NKKLKQQFVETVSAG------GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
           N     +  E +  G      GL+ N+ A        PFGGV++SG+G    K+  + + 
Sbjct: 442 NFSRAIRVSEALEYGMVGHNTGLISNEVA--------PFGGVKQSGLGREGSKYGIEEYL 493
Query: 233 HKKAVLS 239
             K + S
Sbjct: 494 ETKYICS 500

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 6/233 (2%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           L   +LELGG  P +  +  +L++A +  + G++  N GQ C +    I  +  A     
Sbjct: 228 LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTD 286
Query: 68  XXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI 125
                       +PL E  DL      +    L + +      G +++ GGE+   +   
Sbjct: 287 RFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNY 346
Query: 126 -APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
            A T+L DV  D     +E+FGP+  I        +  + N     L+A +FT +  L  
Sbjct: 347 YAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAA 406
Query: 185 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +    +  GG+ IN  +   A   + FGGV++SG G     F    F + + V
Sbjct: 407 EXAARLECGGVFINGYSASDA--RVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 17/249 (6%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M  AA HL  +  ELGGKSP +  +  +L+ A   ++   +  N G+ C +   ++  + 
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFN-GERCTASSRLLVEEK 316
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
                              +PL+ + ++  +++  H  R+   ++  K  G +++ GGER
Sbjct: 317 IFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGER 376
Query: 119 DKNKLR---------IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 169
            K   R         + PT+ +       I  EEIFGP+L  +     E++    N    
Sbjct: 377 AKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKY 435
Query: 170 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSF 228
            LAAY+FT + +   +    + AG + +N   V HL     PFGGV+ SG     G ++ 
Sbjct: 436 GLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYAL 492
Query: 229 DVFSHKKAV 237
           D ++  K +
Sbjct: 493 DFYTDLKTI 501

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 8/240 (3%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD- 60
           AA   +L  V LELGGKSP +  +  +L  A  +   G +  N GQ C +   I   +  
Sbjct: 255 AAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESI 313
Query: 61  YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD- 119
           Y                G     + +    ++   + ++ +L+      G  +  G +  
Sbjct: 314 YEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGL 373
Query: 120 -KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
            +    I PT+  +V  D  I  EEIFGP+  IL    +++  +  N+    L A +FTN
Sbjct: 374 GRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTN 433
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +          + AG + IN    + A+++  PFGG + SG G   G+F    +S  K V
Sbjct: 434 DINKALMVSSAMQAGTVWIN---CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 490

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 13  LELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXX 70
           +ELGGK+PV VFD      V       G +  N GQ C +   I   K  Y         
Sbjct: 266 MELGGKAPVIVFDDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKLGA 323
Query: 71  XXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDK-NKLRIAP 127
                  G    ES +L  + +  H  R+ K +++ K +G  K++ GGE+ K N    AP
Sbjct: 324 AVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAP 383
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
           TLL    +D  I+ +E+FGP++ +   D  E   +  N     LA+ ++T +     +  
Sbjct: 384 TLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVS 443
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG---AYHGKFSFDVFSH 233
             +  G   +N     + V  +P GG + SG G   + +G   + V  H
Sbjct: 444 ARLQYGCTWVNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           +A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   +  
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQ 298
Query: 62  APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
                             +P  E+ +   +V+  H   +   ++  K    +++ GGER 
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
            +        +APT+  D   D  I+ EEIFGP++ IL  D  +++    N     LAA 
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + T +     + +  + AG   IN      A   +P GG ++SG+G  +G  +   ++  
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 476
Query: 235 KAV 237
           K+V
Sbjct: 477 KSV 479

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           +A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   +  
Sbjct: 239 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQ 297
Query: 62  APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
                             +P  E+ +   +V+  H   +   ++  K    +++ GGER 
Sbjct: 298 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 357
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
            +        +APT+  D   D  I+ EEIFGP++ IL  D  +++    N     LAA 
Sbjct: 358 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 417
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + T +     + +  + AG   IN      A   +P GG ++SG+G  +G  +   ++  
Sbjct: 418 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 475
Query: 235 KAV 237
           K+V
Sbjct: 476 KSV 478

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M   AK +  V LELGG +P +VFD   +L  A    +  K+  N GQ C+  + +    
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQD 298
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG- 116
                            +  + L++   +  +++    A++ + + D    G ++V GG 
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358
Query: 117 --ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPL 171
             ER  N  +  PT+L+DVP ++ +  EE FGPL P+    + +D  D+I   N     L
Sbjct: 359 AHERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGL 413
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           AAY +  +     +  E +  G + IN   +   V   PFGG++ SG+G    K+  + +
Sbjct: 414 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M   AK +  V LELGG +P +VFD   +L  A    +  K+  N GQ C+  + +    
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQD 298
Query: 60  DYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG- 116
                            +  + L++   +  +++    A++ + + D    G ++V GG 
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358
Query: 117 --ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPL 171
             ER  N  +  PT+L+DVP ++ +  EE FGPL P+    + +D  D+I   N     L
Sbjct: 359 AHERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGL 413
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           AAY +  +     +  E +  G + IN   +   V   PFGG++ SG+G    K+  + +
Sbjct: 414 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           +A++  L  V + LGGKSP++     +L  A    +M  +  ++GQ C +   +   +  
Sbjct: 239 SASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQ 297
Query: 62  APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
                             +P  E+ +   +V+  H   +   ++  K    +++ GGER 
Sbjct: 298 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 357
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
            +        +APT+  D   D  I+ EEIFGP++ IL  D  +++    N     LAA 
Sbjct: 358 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 417
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + T +     + +  + AG   IN      A   +P GG ++SG+G  +G  +   ++  
Sbjct: 418 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 475
Query: 235 KAV 237
           K+V
Sbjct: 476 KSV 478

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           +A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ   +   +   +  
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQ 298
Query: 62  APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
                             +P  E+ +   +V+  H   +   ++  K    +++ GGER 
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
            +        +APT+  D   D  I+ EEIFGP++ IL  D  +++    N     LAA 
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + T +     + +  + AG   IN      A   +P GG ++SG+G  +G  +   ++  
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 476
Query: 235 KAV 237
           K+V
Sbjct: 477 KSV 479

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           +A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ   +   +   +  
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQ 298
Query: 62  APXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERD 119
                             +P  E+ +   +V+  H   +   ++  K    +++ GGER 
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 120 KNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
            +        +APT+  D   D  I+ EEIFGP++ IL  D  +++    N     LAA 
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + T +     + +  + AG   IN      A   +P GG ++SG+G  +G  +   ++  
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRI 476
Query: 235 KAV 237
           K+V
Sbjct: 477 KSV 479

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           AAA  +L  V LELG K+P +  +  +L  A      G +  N GQ+CI+   +   +  
Sbjct: 257 AAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAI 315
Query: 62  APXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
                         +   NPL    +    +N     ++ +L++  K  G K+  GG   
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPW 375
Query: 120 KNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
            NK   I PT+  +V  D  I  EEIFGP+  I+    +++     N+    L A +FT 
Sbjct: 376 GNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTK 435
Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +          + AG + +N    +LA  +  P GG + SG G   G++    ++  K V
Sbjct: 436 DLDKAVTVSSALQAGTVWVN---CYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTV 492

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 6/236 (2%)
Query: 4   AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YA 62
           A +    + LELGG +P    S  ++  A    I GK+  + GQ C+  + II  +D Y 
Sbjct: 243 AGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYD 301
Query: 63  PXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN 121
                         YG        +  ++N     +  ++++  K  G ++   G+R  N
Sbjct: 302 EFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN 361
Query: 122 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 181
            L   P + +    +S I   E+F P+  I+     +++ D+ N     L++ +FT++ +
Sbjct: 362 VL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLE 419
Query: 182 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
             ++F   + +G   +ND +V+ +  ++ FGG + SG+G +   +  + F+  K +
Sbjct: 420 KGEKFALQIDSGMTHVNDQSVNDS-PNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 8   LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 67
           +  V LELGG +P V  +  ++  A +   +G +  + GQ C+S + +I           
Sbjct: 254 MKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLE 312
Query: 68  XXXXXXXXFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA 126
                       +P  E   +  ++N +  + L + ++  K  G  V      + +L + 
Sbjct: 313 KFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VH 371
Query: 127 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 186
           P +  DV  D  I  EEIFGPL+ +L  D    + ++ N+    L+A +++ +     QF
Sbjct: 372 PHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQF 431
Query: 187 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
              + +G + IND  V+   H + FGG + SG+G ++G ++ + F+  + +
Sbjct: 432 ALQIDSGMVHINDLTVNDEPHVM-FGGSKNSGLGRFNGDWAIEEFTTDRWI 481

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
           + PT+  +V  +  I  +EIF P+L ++ V  ++++ +I N       A LFT+N    +
Sbjct: 363 VGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIR 422
Query: 185 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 240
            F E + AG L IN   V   +   PF G + S  G  H  GK S D ++ KK V +R
Sbjct: 423 YFRENIDAGMLGIN-LGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 8/242 (3%)
Query: 5   AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPX 64
           A+ +  + LELGG +P +     +L+ A   +I  K+    GQ C+  + I   +  A  
Sbjct: 247 AEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVADA 305
Query: 65  -XXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK--- 120
                         G    +  D+  ++N   F ++ + L D    G  +  G++     
Sbjct: 306 FGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELG 365
Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           + L   PT++  V R+     EE FGPL+P       E+  D  N     LA+Y+FT + 
Sbjct: 366 DGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADA 425
Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           +  Q+    +  G +  N           PFGG + SG+G   G      F   + V  R
Sbjct: 426 ERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV-PR 482
Query: 241 GF 242
           GF
Sbjct: 483 GF 484

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 87  LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
            S ++++  FAR+ K L+  + S    I+ GG+ D +    + P ++        IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
           IFGP+L +     DK +++  +++S T   L   +F+ +K + Q+  + +  +AG   IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 199 DTAVHLAVHSLPFGGVQESG 218
           D +    V   PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 87  LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
            S ++++  FAR+ K L+  + S    I+ GG+ D +    + P ++        IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
           IFGP+L +     DK +++  +++S T   L   +F+ +K + Q+  + +  +AG   IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 199 DTAVHLAVHSLPFGGVQESG 218
           D +    V   PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 87  LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
            S ++++  FAR+ K L+  + S    I+ GG+ D +    + P ++        IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
           IFGP+L +     DK +++  +++S T   L   +F+ +K + Q+  + +  +AG   IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 199 DTAVHLAVHSLPFGGVQESG 218
           D +    V   PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 87  LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 143
            S ++++  FAR+ K L+  + S    I+ GG+ +++    + P ++        IM EE
Sbjct: 388 FSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEE 447
Query: 144 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 198
           IFGP+L +     DK  ++  +++S T   L   +F  +K + Q+    +  +AG   IN
Sbjct: 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYIN 507
Query: 199 DTAVHLAVHSLPFGGVQESG 218
           D +    V   PFGG + SG
Sbjct: 508 DKSTGSVVGQQPFGGARASG 527

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 12/224 (5%)
Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
           AA K+L     ELGG    +     + +V  R ++      N+GQ C S   II  K   
Sbjct: 220 AAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKSRY 278
Query: 63  PXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF-----ARLSKLLDDDKVSGKIVHG-G 116
                            +PLE+       NS        A++ + +D      K+ +   
Sbjct: 279 DEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAID---AGAKVFYQYP 335
Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           E D       PT+L D+ +D+ +  +E+FGP+  +  V+    +  + N  +  L + + 
Sbjct: 336 EIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVI 395
Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 220
            ++    ++    +  G  VIN     +    LPFGG+++SG G
Sbjct: 396 GSDIDRAKKVSAQIETGXTVIN--GRWITSGELPFGGIKKSGYG 437

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 18/246 (7%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  ++  V LELGGKSP++  +  +L  A  +M M     N G+ CI+   +   +  
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
                             NPLE     R  N    NH A L KL++      K    +V 
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
           GG +  +      PT+  DV     I  EE FGP++ I       ++      N+    L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +        + + AG + IN    +    + PFGG ++SG G   G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
              K V
Sbjct: 508 LRIKTV 513

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 18/246 (7%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  ++  V L+LGGKSP++  +  +L  A  +M M     N G+ CI+   +   +  
Sbjct: 276 SCALSNVKKVSLQLGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
                             NPLE     R  N    NH A L KL++      K    +V 
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
           GG +  +      PT+  DV     I  EE FGP++ I       ++      N+    L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +        + + AG + IN    +    + PFGG ++SG G   G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
              K V
Sbjct: 508 LRIKTV 513

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  ++  V L LGGKSP++  +  +L  A + M M     N G+ CI+   +   +  
Sbjct: 276 SCALSNVKKVSLALGGKSPLIIFADCDLNKAVQ-MGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
                             NPLE     R  N    NH A L KL++      K    +V 
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
           GG +  +      PT+  DV     I  EE FGP++ I       ++      N+    L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +        + + AG + IN    +    + PFGG ++SG G   G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
              K V
Sbjct: 508 LRIKTV 513

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 31/250 (12%)
Query: 4   AAKHLTPVLLELGGK-SPVVF-DSGIN-LKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           A+  L  V LELGGK + ++F D+ I+ L+   R         N+GQ+C +P  ++  + 
Sbjct: 260 ASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFY-----NSGQSCNAPTRMLVEQA 314
Query: 61  -YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 116
            Y                G        +  +V+   + ++  L+      G  +V GG  
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG 374
Query: 117 -----ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
                ER      + PT+  DV     I  EEIFGP+L +L  +  +++  + N     L
Sbjct: 375 LPMGMERG---YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGL 431
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP----FGGVQESGMGAYHGKFS 227
             Y+ + ++   ++    V +G + +N        H LP    FGGV+ SG     G + 
Sbjct: 432 TNYIQSQDRSKCRRIAAQVRSGMVEVNG-------HELPGGSYFGGVKFSGRAREGGLWG 484
Query: 228 FDVFSHKKAV 237
              F   KA+
Sbjct: 485 IKEFLDTKAI 494

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  ++  V LELGGKSP++  +  +L  A  +M M     N G+  I+   +   +  
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESI 334
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
                             NPLE     R  N    NH A L KL++      K    +V 
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
           GG +  +      PT+  DV     I  EE FGP++ I       ++      N+    L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +        + + AG + IN    +    + PFGG ++SG G   G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
              K V
Sbjct: 508 LRIKTV 513

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  ++  V LELGGKSP++  +  +L  A  +M M     N G+  I+   +   +  
Sbjct: 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESI 334
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
                             NPLE     R  N    NH A L KL++      K    +V 
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
           GG +  +      PT+  DV     I  EE FGP++ I       ++      N+    L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +        + + AG + IN    +    + PFGG ++SG G   G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
              K V
Sbjct: 508 LRIKTV 513

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 11/238 (4%)
Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTK 59
           +AAAAK +    LELGGK+PV+     +L+     +   G +  N GQ C +   I    
Sbjct: 256 LAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEA 313
Query: 60  D-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD--DKVSGKIVHGG 116
             Y               Y  +     ++  +++     R++  ++   D+   +I  GG
Sbjct: 314 GIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGG 373
Query: 117 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
               ++     PT++    ++  I+  E+FGP++ +      +D+    N     LA+ +
Sbjct: 374 RTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSV 433
Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAV-HSLPFGGVQESGMGAYHGKFSFDVFS 232
           +T +     +    +  G   IN    H  + +  P GG+++SG G     ++ + ++
Sbjct: 434 WTKDISKAXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYGKDXSVYALEDYT 488

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 18/246 (7%)
Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           + A  ++  V L LGGKSP++  +  +L  A + M M     N G+  I+   +   +  
Sbjct: 276 SCALSNVKKVSLALGGKSPLIIFADCDLNKAVQ-MGMSSVFFNKGENAIAAGRLFVEESI 334
Query: 62  APXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVH 114
                             NPLE     R  N    NH A L KL++      K    +V 
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVC 389
Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPL 171
           GG +  +      PT+  DV     I  EE FGP++ I       ++      N+    L
Sbjct: 390 GGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGL 449
Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +        + + AG + IN    +    + PFGG ++SG G   G+ + + +
Sbjct: 450 ASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 232 SHKKAV 237
              K V
Sbjct: 508 LRIKTV 513

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 83  ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 135
           E  D   +V      R+  L+D     G K+V  G RD      +N   I   L  DV  
Sbjct: 340 EKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVTP 398
Query: 136 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 195
           D  I   EIFGP+L ++     E++  +           ++T +    + F   ++ G +
Sbjct: 399 DXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXV 458
Query: 196 VIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 240
            +N    V LA HS  FGG + S  G    HG  S   ++  K + SR
Sbjct: 459 GVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 43/97 (44%)
Query: 128 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 187
           T++  +  +  I  EEIFGP+L ++     + + +  NS    L   +F+ + +   +  
Sbjct: 896 TIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955
Query: 188 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 224
                G L IN       V   PFGG + SG+G   G
Sbjct: 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 130 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 189
           +LDV   +    EE FGPLL ++       +    N+    LAA L +++++  +QF+  
Sbjct: 367 ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL-V 425
Query: 190 VSAGGLVINDTAVHLAVHSLPFGGVQESG 218
            S  G+V  +  +  A  S PFGG+  SG
Sbjct: 426 ESRAGIVNWNKQLTGAASSAPFGGIGASG 454

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	1e-144
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	1e-104
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	3e-42
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	3e-41
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-39
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-38
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	5e-38
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	2e-37
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-36
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-33
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	3e-33
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	3e-33
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	1e-31
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	2e-31
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	3e-31
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-30
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	4e-30
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	4e-30
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	4e-30
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	5e-30
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	6e-30
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-29
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	1e-29
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	1e-29
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	2e-29
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	4e-29
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	2e-28
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	2e-28
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	8e-28
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	4e-27
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-26
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	3e-26
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	3e-26
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	5e-26
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	8e-26
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	2e-25
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-25
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	1e-22
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-20
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	3e-20
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	2e-19
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	7e-19
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	5e-18
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	4e-16
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	6e-16
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	5e-14

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  411 bits (1060), Expect = e-144
 Identities = 119/261 (45%), Positives = 169/261 (64%), Gaps = 7/261 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 213 MTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 271

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +++E LK  L+ FYG++  +S+D  RI+++ HF R+  L++      K+ +GG  D 
Sbjct: 272 IQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEG----QKVAYGGTGDA 327

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               IAPT+L DV   S +M EEIFGP+LPI+ V  +E++   IN   KPLA Y+F++N 
Sbjct: 328 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSND 387

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ +HSLPFGGV  SGMG+YHGK SF+ FSH+++ L R
Sbjct: 388 KVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 447

Query: 241 GFIGD--VPVRYPPYTKGKLR 259
             + D  + VRYPP      +
Sbjct: 448 PLMNDEGLKVRYPPSPAKMTQ 468

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  308 bits (792), Expect = e-104
 Identities = 82/241 (34%), Positives = 131/241 (54%), Gaps = 8/241 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M AAAKHLTPV+LELGGK P++     +L     +++ GK+  N+GQ  I+PD++     
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYS 281

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
               LLE L   ++    +         ++V      RL  LL+  +  G+++ G + D 
Sbjct: 282 VKDALLERLVERVKTELPEIN----STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADV 335

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTNN 179
           +K  ++ T++  V  +  +MSEE+FGP+LP+L  D +  + D +N    KPLA Y+F  +
Sbjct: 336 SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395

Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 239
             + +  +  + +G   +N   +H     LPFGG+  SGMG YHG FS+  F+HKK+V  
Sbjct: 396 MDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455

Query: 240 R 240
            
Sbjct: 456 V 456

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  149 bits (380), Expect = 3e-42
 Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 9/239 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              A   + P++LELGGK    V +   +L++  + +I G +G  +GQ C +   ++  +
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDA-DLELTAKNIIAGAFG-YSGQRCTAVKRVLVME 294

Query: 60  DYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
             A +L+E ++ ++      NP +  D++ ++++     +  L++D    G   +   +R
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR 354

Query: 119 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
           + N   I P L   V  D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN
Sbjct: 355 EGN--LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 412

Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +        E +  G + IN+       +  PF G ++SG G    K+S +  +  K+V
Sbjct: 413 DFPRAFGIAEQLEVGTVHINNKTQRGTDN-FPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  147 bits (374), Expect = 3e-41
 Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 9/239 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              A   + PV+LELGGK P  V D   +LK+   +++ G +   +GQ C +   +    
Sbjct: 248 SEKAK--MIPVVLELGGKDPAIVLDDA-DLKLTASQIVSGAFS-YSGQRCTAIKRVFVQD 303

Query: 60  DYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
             A +L+ ++K  +E     +P +  D++ +++    A +  L+DD   +G  ++ G +R
Sbjct: 304 SVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR 363

Query: 119 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
             N   ++PTLL DV     +  EE FGP+LPI+ V    ++  + N     L A +FT 
Sbjct: 364 QGN--LLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTK 421

Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           +        + +  G + IN        H  PF GV++SG+G    K S    + ++  
Sbjct: 422 DTDRAINIGKHLEVGTVHINAKTERGPDH-FPFLGVKKSGLGVQGIKPSLLSMTRERVT 479

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  143 bits (362), Expect = 1e-39
 Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 12/254 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           +A     +  V LELGG +P VV     ++  A +   +G +  + GQ C+S + +I   
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADA-DIDAAAQAAAVGAFL-HQGQICMSINRVIVDA 304

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + LE     ++N    +P      +  ++N +  + L + ++  K  G  +   G 
Sbjct: 305 AVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP 364

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
            +     + P +  DV  D  I  EEIFGPL+ +L  D    + ++ N+    L+A +++
Sbjct: 365 IEGR--LVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWS 422

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +     QF   + +G + IND  V+   H + FGG + SG+G ++G ++ + F+  + +
Sbjct: 423 KDIDRAAQFALQIDSGMVHINDLTVNDEPH-VMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481

Query: 238 LSRGFIGDVPVRYP 251
                I        
Sbjct: 482 ----GIKRSAENLY 491

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  140 bits (354), Expect = 2e-38
 Identities = 48/244 (19%), Positives = 104/244 (42%), Gaps = 14/244 (5%)

Query: 1   MAAAA-KHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 58
           +     K      +ELGG  P  V +   +L +A  ++  G +    GQ C +   ++  
Sbjct: 252 VKVGGVKQYV---MELGGGDPAIVLEDA-DLDLAADKIARGIYS-YAGQRCDAIKLVLAE 306

Query: 59  KDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
           +    KL+E +   L +    +P +   D+  +++ +    +   ++D    G +++ GG
Sbjct: 307 RPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366

Query: 117 ERDKNKLRIAPTLLL---DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
            R      + PT +    D  +D ++   E+F P+   + V  ++ + ++ N     L A
Sbjct: 367 RRLGPTY-VQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDA 425

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
            +F  +    ++ V  +  G + IND      +   PFGG ++SG+      ++ +  + 
Sbjct: 426 AVFGRDVVKIRRAVRLLEVGAIYINDMPR-HGIGYYPFGGRKKSGVFREGIGYAVEAVTA 484

Query: 234 KKAV 237
            K +
Sbjct: 485 YKTI 488

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  138 bits (350), Expect = 5e-38
 Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 12/254 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              A +    + LELGG +P  V     ++  A    I GK+  + GQ C+  + II  +
Sbjct: 240 GEIAGRAFKRMALELGGNNPFAVLSDA-DVDRAVDAAIFGKFI-HQGQICMIINRIIVHQ 297

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
           D   + +E     ++     +  + K  +  ++N     +  ++++  K  G ++   G+
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
           R  N L   P + +    +S I   E+F P+  I+     +++ D+ N     L++ +FT
Sbjct: 358 RVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           ++ +  ++F   + +G   +ND +V+ + +   FGG + SG+G +   +  + F+  K +
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPWVVEEFTVTKWI 474

Query: 238 LSRGFIGDVPVRYP 251
                I     +YP
Sbjct: 475 S----IQKQYRKYP 484

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  137 bits (348), Expect = 2e-37
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 11/260 (4%)

Query: 1   MAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 54
              AA       HL  V++E+GGK  VV D   +L +A   +++  +G  +GQ C +   
Sbjct: 268 YERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG-FSGQKCSAGSR 326

Query: 55  IITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIV 113
            +  KD   ++LE      +N    +P      +  +++   F ++   ++  K  G+++
Sbjct: 327 AVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLM 386

Query: 114 HGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
            GGE D +    I PT++ D+  +++IM EEIFGP++     +  + + +I N+    L 
Sbjct: 387 TGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLT 446

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVF 231
             + T N+   +Q       G L  N       V   PFGG + SG  +   G     + 
Sbjct: 447 GAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506

Query: 232 SHKKAVLSRGFIGDVPVRYP 251
              K V S  +  ++  +  
Sbjct: 507 MQAKTV-SEMYAENLYFQSH 525

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  134 bits (340), Expect = 1e-36
 Identities = 75/240 (31%), Positives = 127/240 (52%), Gaps = 12/240 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              A      + LELGG +P  V     +L  A   +I G +    GQ CIS   I+  +
Sbjct: 230 TKKAG--FKKIALELGGVNPNIVLKDA-DLNKAVNALIKGSFI-YAGQVCISVGMILVDE 285

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A K +E   N+ +     NPL+ K D+  +++  H   + K+++     G K++ GG+
Sbjct: 286 SIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK 345

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
           RDK      PT+L +V RD+++   E F P++PI+  ++ E+  DI NS    L + +FT
Sbjct: 346 RDKA--LFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFT 401

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
           N+     +F E +  GG+VIND+++     ++PFGGV++SG+G    K++ +  S+ K +
Sbjct: 402 NDINKSLKFAENLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  126 bits (319), Expect = 1e-33
 Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 12/250 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
            A A   L   +LELGG  P +V +   +L++A +  + G++  N GQ C +    I  +
Sbjct: 221 GAQAGAALKKCVLELGGSDPFIVLNDA-DLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEE 278

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A    +            +PL  + DL  +   +    L + +      G +++ GGE
Sbjct: 279 GIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGE 338

Query: 118 R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           +        A T+L DV  D     +E+FGP+  I        +  + N     L+A +F
Sbjct: 339 KIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIF 398

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +  L  +    +  GG+ IN  +   A   + FGGV++SG G     F    F + + 
Sbjct: 399 TADDTLAAEMAARLECGGVFINGYSASDAR--VAFGGVKKSGFGRELSHFGLHEFCNVQT 456

Query: 237 VLSRGFIGDV 246
           V    +   V
Sbjct: 457 V----WKNRV 462

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  125 bits (317), Expect = 3e-33
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 14/245 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
             AA K+L    +ELGG    +V D   + +V    +   +   N+GQ C S   II  K
Sbjct: 218 AEAAGKNLKKSTMELGGNDAFIVLDDA-DPQVLRNVLNDARTY-NDGQVCTSSKRIIVEK 275

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               ++L  LKN   N    +PLE+   L  + +     +L   + +   +G K+ +   
Sbjct: 276 SRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYP 335

Query: 118 R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAA 173
             D       PT+L D+ +D+ +  +E+FGP+  +  V+    +  + N    G   L +
Sbjct: 336 EIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYG---LGS 392

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
            +  ++    ++    +  G  VIN   +      LPFGG+++SG G          F +
Sbjct: 393 SVIGSDIDRAKKVSAQIETGMTVINGRWITSGE--LPFGGIKKSGYGRELSGLGLMAFVN 450

Query: 234 KKAVL 238
           +  V+
Sbjct: 451 EHLVI 455

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  126 bits (318), Expect = 3e-33
 Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 9/245 (3%)

Query: 1   MAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 54
             AA +            +E GGK+ ++ D   +  +A   +++  +G   GQ C +   
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYG-FQGQKCSAASR 327

Query: 55  IITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 114
           +I T+     +LE +    E        E+ DL  +V++    ++   ++  K  G++V 
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL 387

Query: 115 GGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
           GG+R + +   IAPT+  +VP  + I  EEIFGP+L ++ V    ++ ++ N     L  
Sbjct: 388 GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTG 447

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFS 232
            +++  ++  +        G L  N       V   PFGG + SG  A  G   +  +F 
Sbjct: 448 GVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507

Query: 233 HKKAV 237
             KAV
Sbjct: 508 EMKAV 512

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  121 bits (306), Expect = 1e-31
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 13/262 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M AAA+ + PV LELGGKSP VVF+   +L  A    I G +   NGQ C +   +I  +
Sbjct: 247 MTAAAQLVKPVSLELGGKSPLVVFEDV-DLDKAAEWAIFGCFW-TNGQICSATSRLILHE 304

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A + L  +   ++N    +PLE    L  +V+   + ++ K + + K  G  I+ GG 
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS 364

Query: 118 RDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R ++  +   I PT++ DV  +  I  EE+FGP+L + T    E++ D+ N     L A 
Sbjct: 365 RPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAA 424

Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           + +N+ +  ++  +   AG + +N +         P+GGV+ SG G   G++  D +   
Sbjct: 425 VISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482

Query: 235 KAVLSRGFIGDVPVR-YPPYTK 255
           K V     I + P   Y P  K
Sbjct: 483 KQVTQY--ISEEPWGWYQPPAK 502

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  120 bits (303), Expect = 2e-31
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 12/245 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  AAK    V LELGGKSP +V D  +++K A +         N GQ C +   ++   
Sbjct: 235 MEKAAKDFKKVSLELGGKSPYIVLD-DVDIKEAAKATTGKVVN-NTGQVCTAGTRVLVPN 292

Query: 60  DYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                 L  LK +       NP  +   +  I++   F ++   ++     G ++ +GG 
Sbjct: 293 KIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGP 352

Query: 118 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
                L       PT+ ++V     I  EEIFGP++ ++T + ++++  I N     LA 
Sbjct: 353 GKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAG 412

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
           Y+   +K+   +   ++ AG + IN+      +   PFGG ++SG+G   G +  + F  
Sbjct: 413 YVIGKDKETLHKVARSIEAGTVEINEAGRKPDL---PFGGYKQSGLGREWGDYGIEEFLE 469

Query: 234 KKAVL 238
            K++ 
Sbjct: 470 VKSIA 474

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  120 bits (303), Expect = 3e-31
 Identities = 48/245 (19%), Positives = 94/245 (38%), Gaps = 13/245 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
                +     LLELGG +  + F+   +L +     +    G   GQ C +   +   +
Sbjct: 256 GLMVQERFGRSLLELGGNNAIIAFEDA-DLSLVVPSALFAAVG-TAGQRCTTARRLFIHE 313

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +++  LK         NP +       +      +     +++ K  G  +V+GG+
Sbjct: 314 SIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGK 373

Query: 118 R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             D+    + PT++  +  D+ I   E F P+L +      E+ F   N   + L++ +F
Sbjct: 374 VMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIF 433

Query: 177 TNNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
           T +  L + F      G   G+V +N       +    FGG + +G G   G  ++  + 
Sbjct: 434 TKD--LGRIFRWLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKHTGGGRESGSDAWKQYM 490

Query: 233 HKKAV 237
            +   
Sbjct: 491 RRSTC 495

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  118 bits (298), Expect = 1e-30
 Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 9/242 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MA AAK++T V LELGGK+P +V D   +L++A + ++  +   N+GQ C   + +   K
Sbjct: 238 MATAAKNITKVCLELGGKAPAIVMDDA-DLELAVKAIVDSRVI-NSGQVCNCAERVYVQK 295

Query: 60  DYAPKLLESLKNELENFYGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGG 116
               + +  L   ++     NP E  D++   ++N+    R+ + +      G ++  GG
Sbjct: 296 GIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGG 355

Query: 117 ER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
           +  +       PTLLLDV ++  IM EE FGP+LP++  D +ED+  + N     L + +
Sbjct: 356 KAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSI 415

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
           +T N  +  + ++ +  G   IN              G ++SG+G   GK     +   +
Sbjct: 416 YTQNLNVAMKAIKGLKFGETYINRENFEAMQ--GFHAGWRKSGIGGADGKHGLHEYLQTQ 473

Query: 236 AV 237
            V
Sbjct: 474 VV 475

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  117 bits (295), Expect = 4e-30
 Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 11/243 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           ++  A  +    +ELGGK+P +VFD   +++     +    +  N GQ C +   I   K
Sbjct: 254 ISHTASSIKRTHMELGGKAPVIVFDDA-DIEAVVEGVRTFGY-YNAGQDCTAACRIYAQK 311

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGG 116
                L+E L   +       P +   +L  + +  H  R+ K +++ K +G  K++ GG
Sbjct: 312 GIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGG 371

Query: 117 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
           E+ K      APTLL    +D  I+ +E+FGP++ +   D  E   +  N     LA+ +
Sbjct: 372 EKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSV 431

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHK 234
           +T +     +    +  G   +N    H  + S +P GG + SG G     +  + ++  
Sbjct: 432 WTKDVGRAHRVSARLQYGCTWVNT---HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVV 488

Query: 235 KAV 237
           + V
Sbjct: 489 RHV 491

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  117 bits (295), Expect = 4e-30
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 18/258 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              AA+ L P  LELGGKS  ++ +   +L  A   M+      N GQ C++   I+  +
Sbjct: 241 GRRAAEMLKPCTLELGGKSAAIILEDV-DLAAAIPMMVFSGVM-NAGQGCVNQTRILAPR 298

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +++ ++ N +       P +    +  +++     R+   +      G ++V GG 
Sbjct: 299 SRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG 358

Query: 118 RDKNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 174
           R +       I PT+  DV     I  EEIFGP+L I+  D  ED+  I N     LA  
Sbjct: 359 RPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGS 418

Query: 175 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 234
           ++T +     +  + +  G   IN  A        PFGG + SG+G  +G    + F+ +
Sbjct: 419 VWTTDVPKGIKISQQIRTGTYGINWYAFDPGS---PFGGYKNSGIGRENGPEGVEHFTQQ 475

Query: 235 KAVLSRGFIGDVPVRYPP 252
           K+VL       +P+ Y  
Sbjct: 476 KSVL-------LPMGYTV 486

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  117 bits (295), Expect = 4e-30
 Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 9/242 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              AA+ +  V LELGGK P +VF    +L  A   +  G +  N GQ CIS   ++  +
Sbjct: 257 GEIAARTVKRVGLELGGKGPQIVFADA-DLDAAADGIAYGVYH-NAGQCCISGSRLLVQE 314

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                L+E L +        +PL  +  +  +++  H  ++   +     SG +++ GGE
Sbjct: 315 GIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGE 374

Query: 118 RDKNK--LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
           R   +  L  APT+   V  D  I  EEIFGP+L  LT    +++  + N+    L+A +
Sbjct: 375 RIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASV 434

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
           ++ N +   Q +  + AG   IN   V      LP GG ++SG+G   G++ FD +S  K
Sbjct: 435 WSTNLETALQTIRRIRAGRCWINS--VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFK 492

Query: 236 AV 237
            V
Sbjct: 493 GV 494

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  116 bits (294), Expect = 5e-30
 Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 17/246 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIIT 57
              A+  L  V LELGGK   ++F    ++         G   C  N+GQ+C +P  ++ 
Sbjct: 257 SKNASNTLKRVCLELGGKGANIIFA-DADIDAL----QRGVRHCFYNSGQSCNAPTRMLV 311

Query: 58  TKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 115
            +    K +++ K+  E        ++   +  +V+   + ++  L+      G  +V G
Sbjct: 312 EQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTG 371

Query: 116 GERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
           G      +     + PT+  DV     I  EEIFGP+L +L  +  +++  + N     L
Sbjct: 372 GTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGL 431

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
             Y+ + ++   ++    V +G + +N   +        FGGV+ SG     G +    F
Sbjct: 432 TNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGS---YFGGVKFSGRAREGGLWGIKEF 488

Query: 232 SHKKAV 237
              KA+
Sbjct: 489 LDTKAI 494

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  116 bits (293), Expect = 6e-30
 Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 8/240 (3%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           AA + +L  V LELGGKSP ++     ++  A  +     +  N GQ   +       +D
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDA-DMDWAVEQAHFALFF-NQGQCSCAGSRTFVQED 313

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
              + +E      ++    NP +SK +    V+   F ++   ++  K  G K++ GG  
Sbjct: 314 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373

Query: 119 DKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
             ++   I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT
Sbjct: 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 237
            +        + + AG + +N     +     PFGG + SG G   G++    ++  K V
Sbjct: 434 KDLDKANYLSQALQAGTVWVN--CYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  116 bits (292), Expect = 1e-29
 Identities = 50/241 (20%), Positives = 94/241 (39%), Gaps = 10/241 (4%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
               +    + LE+GG +P VV +   +L  A   +I   +  + GQ C     ++  + 
Sbjct: 236 QFGGQPQKILALEMGGNNPLVVEEVA-DLDAAVYTIIQSAFI-SAGQRCTCARRLLVPQG 293

Query: 61  -YAPKLLESLKNELENFY-GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
            +   LL  L         G+   +    +  +++ +    L K  +     G + +   
Sbjct: 294 AWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAM 353

Query: 117 ER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
            +       + P +L DV   +    EE FGPLL ++       +    N+    LAA L
Sbjct: 354 TQPIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGL 412

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
            +++++  +QF+    AG +  N      A    PFGG+  SG       ++ D  ++  
Sbjct: 413 LSDSRERFEQFLVESRAGIVNWNKQLTGAASS-APFGGIGASGNHRPSAYYAADYCAYPV 471

Query: 236 A 236
           A
Sbjct: 472 A 472

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  116 bits (292), Expect = 1e-29
 Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 11/243 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           +AAAAK +    LELGGK+P +V+    +L+     +    +  N GQ C +   I    
Sbjct: 256 LAAAAKTVKRTHLELGGKAPVIVYGDA-DLEAVVNGIRTFGY-YNAGQDCTAACRIYAEA 313

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGG 116
               KL+  L + +         +++ ++  +++     R++  ++        +I  GG
Sbjct: 314 GIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGG 373

Query: 117 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
               ++     PT++    ++  I+  E+FGP++ +      +D+    N     LA+ +
Sbjct: 374 RTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSV 433

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHK 234
           +T +     +    +  G   IN    H  + + +P GG+++SG G     ++ + ++  
Sbjct: 434 WTKDISKAMRAASRLQYGCTWINT---HFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAV 490

Query: 235 KAV 237
           + +
Sbjct: 491 RHI 493

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  116 bits (292), Expect = 1e-29
 Identities = 57/245 (23%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  AA ++T + LELGGK+P ++FD   + ++A  + + G +  + GQ C +   I+   
Sbjct: 266 MKNAANNVTNIALELGGKNPNIIFDDA-DFELAVDQALNGGYF-HAGQVCSAGSRILVQN 323

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               K  ++L + ++     N  ++  ++  ++++ H  ++   +D  K  G  I  GG+
Sbjct: 324 SIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383

Query: 118 RDKNKLR-----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
           R             PT++ +      I+ EE+FGP++ +   +  +++  + N     LA
Sbjct: 384 RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLA 443

Query: 173 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS 232
             +F+ +    Q+    +  G + IND   H      P+GG ++SG+G   GK   + + 
Sbjct: 444 GAVFSKDIGKAQRVANKLKLGTVWINDF--HPYFAQAPWGGYKQSGIGRELGKEGLEEYL 501

Query: 233 HKKAV 237
             K +
Sbjct: 502 VSKHI 506

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  115 bits (290), Expect = 2e-29
 Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 9/242 (3%)

Query: 1   MAAAAK-HLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 58
             AA K +L  V LELGGKSP +VF    +L  A      G +  + GQ CI+   +   
Sbjct: 255 KEAAGKSNLKRVSLELGGKSPCIVFADA-DLDNAVEFAHQGVFY-HQGQCCIAASRLFVE 312

Query: 59  KDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
           +    + +       + +   NPL         ++   + ++  L++  K  G K+  GG
Sbjct: 313 ESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGG 372

Query: 117 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
               NK   I PT+  DV  D  I  EEIFGP+  I+    ++D     N+    L+A +
Sbjct: 373 GPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGI 432

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 235
           FTN+          + +G + +N     +     PFGG + SG G   G++ F  ++  K
Sbjct: 433 FTNDIDKAITVSSALQSGTVWVN--CYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 490

Query: 236 AV 237
            V
Sbjct: 491 TV 492

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  114 bits (288), Expect = 4e-29
 Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 11/244 (4%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
            AAAA HL  V +ELGGKSP +VFD   +++ A    ++G +  ++GQ C +   +   K
Sbjct: 245 AAAAAGHLKHVTMELGGKSPMIVFDDA-DIESAVGGAMLGNFY-SSGQVCSNGTRVFVQK 302

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + LE+LK   E     +PL+    L  +V+     ++   ++  K  G  ++ GG 
Sbjct: 303 KAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGG 362

Query: 118 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
              N       + PT+  DV  D  I  EEIFGP++ +L  D  ++     N+    LA 
Sbjct: 363 IPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAG 422

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSH 233
            +FT +     + V+ + AG L IN    +L    +PFGG ++SG G  +   + + +S 
Sbjct: 423 GVFTADLARAHRVVDGLEAGTLWIN--TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSE 480

Query: 234 KKAV 237
            K V
Sbjct: 481 LKTV 484

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  112 bits (283), Expect = 2e-28
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 16/257 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  +AK +  V LELGGKSP ++F     L+ A R  +M  +    GQ C +   +   +
Sbjct: 250 MEMSAKTVKHVTLELGGKSPLLIFKDC-ELENAVRGALMANFL-TQGQVCTNGTRVFVQR 307

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
           +  P+ LE +    +     +PL ++  +  +++     ++   +   K  G +++ GGE
Sbjct: 308 EIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGE 367

Query: 118 RDKNKLR-------IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 170
                         ++P +L +   D   + EEIFGP++ +L  D  E+     N+ T  
Sbjct: 368 PLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFG 427

Query: 171 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 230
           LA+ +FT +     +    + AG   IN     ++   +PFGG + SG G  +G+ + D 
Sbjct: 428 LASGVFTRDISRAHRVAANLEAGTCYINTY--SISPVEVPFGGYKMSGFGRENGQATVDY 485

Query: 231 FSHKKAVLSRGFIGDVP 247
           +S  K V+    +GDV 
Sbjct: 486 YSQLKTVIVE--MGDVD 500

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  112 bits (283), Expect = 2e-28
 Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M  AA HL  +  ELGGKSP +VF    +L+ A   ++   +   NG+ C +   ++  +
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADA-DLERALDAVVFQIFS-FNGERCTASSRLLVEE 315

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                 +  +          +PL+ + ++  +++  H  R+   ++  K  G +++ GGE
Sbjct: 316 KIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGE 375

Query: 118 RDKNKLR---------IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 168
           R K   R         + PT+ +       I  EEIFGP+L  +     E++    N   
Sbjct: 376 RAKTSFRGEDLSRGNYLLPTVFVGEN-HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTK 434

Query: 169 KPLAAYLFTNNKKLKQQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFS 227
             LAAY+FT + +   +    + AG + +N     HL     PFGGV+ SG     G ++
Sbjct: 435 YGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYA 491

Query: 228 FDVFSHKKAVL 238
            D ++  K + 
Sbjct: 492 LDFYTDLKTIA 502

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  110 bits (278), Expect = 8e-28
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 20/249 (8%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
              +A+++TPV+LELGGK+P VV D   +L  A    + G++  N GQ C   + +    
Sbjct: 244 YKTSAEYMTPVMLELGGKAPMVVMDDA-DLDKAAEDALWGRFA-NCGQVCTCVERLYVHA 301

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               + +      ++     +P+++   +    N      +  ++ +    G  +  GG+
Sbjct: 302 SVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGK 361

Query: 118 RDKNKLRI-----APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 172
               +         PT+L+DV +D++++ EE FGP+LPI+ V  +E + +  N     L+
Sbjct: 362 TATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLS 421

Query: 173 AYLFTNNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 228
           AY+ T +            +    G V IN              G ++SG G   GKF  
Sbjct: 422 AYVHTQS--FANIN--QAISDLEVGEVYINRGMGEQHQ--GFHNGWKQSGFGGEDGKFGL 475

Query: 229 DVFSHKKAV 237
           + +  KK V
Sbjct: 476 EQYLEKKTV 484

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  108 bits (273), Expect = 4e-27
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 13/245 (5%)

Query: 1   MAAAAK-HLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 58
           M + A  ++  V LELGGKSP ++F    +L  A +  +   +  N G+ CI+   +   
Sbjct: 274 MKSCALSNVKKVSLELGGKSPLIIFADC-DLNKAVQMGMSSVFF-NKGENCIAAGRLFVE 331

Query: 59  KDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 116
           +    + ++ +  E+E     NPLE   +     +  H  +L +        G  +V GG
Sbjct: 332 ESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGG 391

Query: 117 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILT--VDKIEDSFDIINSGTKPLAA 173
            +         PT+  DV     I  EE FGP++ I       ++      N+    LA+
Sbjct: 392 NQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451

Query: 174 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGKFSFDVFS 232
            +FT +        + + AG + IN    +     + PFGG ++SG G   G+ + + + 
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYL 508

Query: 233 HKKAV 237
             K V
Sbjct: 509 RIKTV 513

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  106 bits (266), Expect = 3e-26
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 16/228 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           M   AK +  V LELGG +P +VFD   +L  A    +  K+  N GQ C+  + +    
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQD 298

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               +  E L+  +   +  + L++   +  +++    A++ + + D    G ++V GG+
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358

Query: 118 R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
             ++      PT+L+DVP ++ +  EE FGPL P+       D     N     LAAY +
Sbjct: 359 AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFY 418

Query: 177 TNNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMG 220
             +  L + F   V      G+V IN   +   V   PFGG++ SG+G
Sbjct: 419 ARD--LSRVF--RVGEALEYGIVGINTGIISNEV--APFGGIKASGLG 460

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  106 bits (266), Expect = 3e-26
 Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MA +A  +  + LELGG +P +VFD   +L  A    I  K+  NNGQ C+  +     +
Sbjct: 244 MAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKYR-NNGQTCVCTNRFFVHE 301

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
                  + L   +         ES   L  ++N     ++   + D    G  ++ GG+
Sbjct: 302 RVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGK 361

Query: 118 R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           R         PT+L  V  D  +  EE FGPL P+      E+   + N     LAAYL+
Sbjct: 362 RHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLY 421

Query: 177 TNNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMG 220
           + +  + + +   V+     G+V IN   +   V   PFGGV++SG+G
Sbjct: 422 SRD--IGRVW--RVAEALEYGMVGINTGLISNEV--APFGGVKQSGLG 463

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  105 bits (265), Expect = 5e-26
 Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 18/258 (6%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           +   A+ +  + LELGG +P +VFD   +L+ A   +I  K+    GQ C+  + I   +
Sbjct: 243 IVDTAEQVKKLALELGGNAPFIVFDDA-DLEAAADNLIANKFR-GGGQTCVCANRIFVHE 300

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
             A    + L   +      + +    D+  ++N   F ++ + L D    G  +V G +
Sbjct: 301 KVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQ 360

Query: 118 RDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 175
             +  + L   PT++  V R+     EE FGPL+P+      E+  D  N     LA+Y+
Sbjct: 361 PAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYV 420

Query: 176 FTNNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           FT +   ++     V+AG   G V  N           PFGG++ SG+G   G      F
Sbjct: 421 FTAD--AERAQ--RVAAGLRFGHVGWNTGTGPTPE--APFGGMKASGIGREGGLEGLFEF 474

Query: 232 SHKKAVLSRGFIGDVPVR 249
              + V  RGF  ++  +
Sbjct: 475 VEAQTV-PRGFAENLYFQ 491

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  104 bits (263), Expect = 8e-26
 Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 16/227 (7%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           MA  A  +  + LELGG +P +VFD   +L  A    ++ K+  N GQ C+  + I   +
Sbjct: 264 MAQCAPTIKRISLELGGNAPFIVFDDA-DLDAAVDGAMVSKYR-NAGQTCVCANRIYVQR 321

Query: 60  DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 117
               K  E L  +++     N  E    +  ++      ++   ++D    G K++ GG+
Sbjct: 322 GVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK 381

Query: 118 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 177
                L   P +L  V  D L+  EE FGPL P+   D  E+     N     LAAY +T
Sbjct: 382 E-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYT 440

Query: 178 NNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMG 220
            N    +     VS     G+V  N   +   V   PFGGV++SG+G
Sbjct: 441 EN--FSRAI--RVSEALEYGMVGHNTGLISNEV--APFGGVKQSGLG 481

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  104 bits (262), Expect = 2e-25
 Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 9/226 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +     ++  ++ E+GGK+ ++ D   +L  A   ++   +G   GQ C +   +I    
Sbjct: 768 VHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFG-FQGQKCSACSRVIVLDA 826

Query: 61  YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
              K +E L +  +        +    +  + +      + +  +  K  G +++     
Sbjct: 827 VYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP 886

Query: 120 KNKLR-IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYL 175
             +   +  T++  +  +  I  EEIFGP+L ++     + + +  NS       L   +
Sbjct: 887 AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFA---LTGGI 943

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 221
           F+ + +   +       G L IN       V   PFGG + SG+G 
Sbjct: 944 FSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT 989

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  103 bits (260), Expect = 2e-25
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 21/231 (9%)

Query: 1   MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 59
           +  AA  +  V +ELGG +P +VFDS  N+  A    +  K+  N GQ C+  +  +  +
Sbjct: 245 LHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQR 302

Query: 60  ----DYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 114
                +     E++K  L    G    E      ++N     ++ K ++D    G  +V 
Sbjct: 303 GIHDAFVKAFAEAMKKNLRVGNGFE--EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVT 360

Query: 115 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
           GG+R    K    PTLL +V +D L   EE FGPL P++  D  E++  I N+    LA 
Sbjct: 361 GGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAG 420

Query: 174 YLFTNNKKLKQQFVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMG 220
           Y ++ +    Q +   V+     G+V +N+  +       PFGGV++SG+G
Sbjct: 421 YFYSQD--PAQIW--RVAEQLEVGMVGVNEGLISSVE--CPFGGVKQSGLG 465

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 96.8 bits (241), Expect = 1e-22
 Identities = 40/224 (17%), Positives = 89/224 (39%), Gaps = 7/224 (3%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA    + P++ E GG + ++ D+    +     ++   +  + GQ C +   +   +D
Sbjct: 747 LAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQED 805

Query: 61  YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 119
            A +++E +          +P + +  +  +++     RL   +   K   ++   G   
Sbjct: 806 VADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAP 865

Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFT 177
           +    +AP +          ++EE+FGP+L ++    + +E     I      L   + +
Sbjct: 866 EGCF-VAPHIFELTEAG--QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHS 922

Query: 178 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 221
                 +  ++ V  G + +N   +   V   PFGG   SG G 
Sbjct: 923 RIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP 966

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 89.4 bits (222), Expect = 2e-20
 Identities = 32/234 (13%), Positives = 78/234 (33%), Gaps = 25/234 (10%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           + AA    TP +    G  P   +   N+  A + ++  K   +NG  C S   ++  + 
Sbjct: 204 VKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSK-TFDNGTICASEQSVVVERV 262

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
               ++   +   +  +  +  E+  L + +   + +    ++         +       
Sbjct: 263 NKEAVIAEFRK--QGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPA 320

Query: 120 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAAYL 175
             ++ IA           +  S E   P+L   T +  +++     DI+          +
Sbjct: 321 DARVLIAEE---TKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLII 377

Query: 176 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSF 228
            + +K++ ++F        L++N             GG+     GA  +   + 
Sbjct: 378 HSEDKEIIREFALKKPVSRLLVNTPG--------ALGGI-----GATTNLVPAL 418

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 32/269 (11%), Positives = 83/269 (30%), Gaps = 34/269 (12%)

Query: 2   AAAAKHLTPVLLELGGKSP-VVFD----SGINLKVACRRMIMGKWGCNNGQACISPDHII 56
            A  +    + ++    +  ++            +  + ++       +GQ C +     
Sbjct: 248 PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTV-KSGQKCTAIRRAF 306

Query: 57  TTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 114
             +     +LE+LK +L      NP  ++  +  +V+   +  +   +   +        
Sbjct: 307 VPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYD 366

Query: 115 GGERDKNKLR------IAPTLLL--DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD---- 162
                           +AP L +  D    +L+   E+FGP+  +       D+      
Sbjct: 367 SSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEA 426

Query: 163 ----IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS---------L 209
               +   G   L A +++N+     +    ++     ++  +  +              
Sbjct: 427 HAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMS 486

Query: 210 PFGGVQESGMGA-YHGKFSFDVFSHKKAV 237
             GG   +G G    G  +   +  + A+
Sbjct: 487 LHGGPGRAGGGEELGGLRALAFYHRRSAI 515

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 86.6 bits (215), Expect = 2e-19
 Identities = 41/225 (18%), Positives = 79/225 (35%), Gaps = 22/225 (9%)

Query: 1   MAAAAKHLTPV--LLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT 57
              A +   P+    ELG  +P  +F S +  K       +       GQ C  P  +  
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297

Query: 58  TKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG 116
                    +E+ ++ +     ++P  S  L+  +  ++ +++     DD +   +    
Sbjct: 298 LNTPETQAFIETAQSLIR---QQSP--STLLTPGIRDSYQSQVVSRGSDDGI--DVTFSQ 350

Query: 117 ERDKNKLRIAPTLLL---DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 173
                   +A  L +   +  R      EEIFGP   I+  + + D   +       L A
Sbjct: 351 AESP---CVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTA 407

Query: 174 YLFTNNKKLK--QQFVETVS--AGGLVINDTAVHLAV-HSLPFGG 213
            +    +      Q +  +   AG LV N     + V +++  GG
Sbjct: 408 TIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGG 452

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 85.0 bits (211), Expect = 7e-19
 Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 24/209 (11%)

Query: 3   AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 62
           AA     P +    G  PVV D   ++K A   ++M K   +NG  C S   +I   +  
Sbjct: 201 AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTF-DNGVVCASEQAVIVVDEVY 259

Query: 63  PKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH------GG 116
            ++ E   +   +    +  ++  + +++  +            K+ G+         G 
Sbjct: 260 DEVKERFASHKAHV--LSKTDADKVRKVLLIDGALN-------AKIVGQPATAIAEMAGV 310

Query: 117 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD----IINSGTKPLA 172
           +   +   +    L  V  D    + E   P L +   D  ED+      ++  G     
Sbjct: 311 KVPADTKVLIGEGLGKVSYDDAF-AHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHT 369

Query: 173 AYLFTNNKKLKQ---QFVETVSAGGLVIN 198
           + L+TN          F + +    ++IN
Sbjct: 370 SGLYTNQDVNADRIRYFGDKMKTARILIN 398

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 82.7 bits (205), Expect = 5e-18
 Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 17/228 (7%)

Query: 6   KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 65
           +    +  E GGK+     S  ++       +   +    GQ C +   +   K   P++
Sbjct: 306 RTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQI 364

Query: 66  LESLKNELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKN 121
              L  E       +P E      S ++++  FAR+ K L+  + S  +    GG+ +++
Sbjct: 365 KGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNES 424

Query: 122 K-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFT 177
               + P ++        IM EEIFGP+L +     DK  ++  +++S T   L   +F 
Sbjct: 425 VGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFA 484

Query: 178 NNKKLKQQFVETV--SAGGLVINDT---AVHLAVHSLPFGGVQESGMG 220
            +K + Q+    +  +AG   IND    +V   V   PFGG + SG  
Sbjct: 485 QDKAIVQEATRMLRNAAGNFYINDKSTGSV---VGQQPFGGARASGTN 529

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 77.0 bits (190), Expect = 4e-16
 Identities = 38/238 (15%), Positives = 70/238 (29%), Gaps = 31/238 (13%)

Query: 1   MAAAAKHLTPV--LLELGGKSPVVFDSGINLKVAC---RRMIMGKWGCNNGQACISPDHI 55
               A    P+    ELG  +P+          A    +           GQ C +P   
Sbjct: 271 FDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTM-GAGQFCTNPGIA 329

Query: 56  ITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 114
           +  +   A +   +    L     +  L        +   +    ++    + V  K + 
Sbjct: 330 VVIEGADADRFTTAAVEALAKVAPQTMLTDG-----IAKAYRDGQARFATRNAV--KPLL 382

Query: 115 GGERDKNKLRIAPTLLLDVPRDSL---IMSEEIFGPLLPILTVDKIEDSFDIINS---GT 168
             E         P L        L    + EE+FGPL  ++ V    +  ++        
Sbjct: 383 ATESSGRDAS--PNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQ- 439

Query: 169 KPLAAYLFTNNKKLKQ----QFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESGMG 220
             L A +  +   L+     + V    AG +++N   T V +    +  G    S   
Sbjct: 440 --LTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 76.5 bits (189), Expect = 6e-16
 Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 11/203 (5%)

Query: 46  GQACISPDHIITTKDYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLD 104
           G+ C++   +   +  A + +  L+ ++ +   G    +   L  ++  ++  R    ++
Sbjct: 280 GERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIE 339

Query: 105 DDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 160
                G ++V  G R+    +   + PT+  +V  +  I  +EIF P+L ++ V  ++++
Sbjct: 340 KGLEEGARLVCDG-RENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398

Query: 161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DTAVHLAVHSLPFGGVQESGM 219
            +I N       A LFT+N    + F E + AG L IN      +A     F G + S  
Sbjct: 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFP--FSGWKSSFF 456

Query: 220 G--AYHGKFSFDVFSHKKAVLSR 240
           G    +GK S D ++ KK V +R
Sbjct: 457 GTLHANGKDSVDFYTRKKVVTAR 479

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 70.7 bits (174), Expect = 5e-14
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 125 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 184
           I   L  DV  D  I   EIFGP+L ++     E++  +           ++T +    +
Sbjct: 388 IGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAAR 447

Query: 185 QFVETVSAGGLVIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 240
            F   ++ G + +N    V LA HS  FGG + S  G    HG  S   ++  K + SR
Sbjct: 448 DFASRINIGMVGVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
1kae_A	434	HDH, histidinol dehydrogenase; L-histidinol dehydr	89.32

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=3.8e-64  Score=475.71  Aligned_cols=252  Identities=46%  Similarity=0.830  Sum_probs=234.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++ |+|
T Consensus       214 ~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~  291 (469)
T 3sza_A          214 TAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GED  291 (469)
T ss_dssp             HHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSC
T ss_pred             HHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCC
Confidence            5678999999999999999999999999999999999999 99999999999999999999999999999999986 555


Q ss_pred             -CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           82 -LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        82 -~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                       ++++++||++++.+++|+++++    +|+++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       292 ~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  367 (469)
T 3sza_A          292 AKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEA  367 (469)
T ss_dssp             GGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHH
T ss_pred             CcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHH
Confidence             5789999999999999999998    58899999987778999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+++|+++|||+++|||+|.+++++++.++++|.|+||+...+...+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus       368 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~  447 (469)
T 3sza_A          368 IQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR  447 (469)
T ss_dssp             HHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEEC
T ss_pred             HHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEEC
Confidence            99999999999999999999999999999999999999987666678999999999999999999999999999999999


Q ss_pred             CCCCC--CCCcCCCCchhHHH
Q 023415          241 GFIGD--VPVRYPPYTKGKLR  259 (282)
Q Consensus       241 ~~~~~--~~~~~~~~~~~~~~  259 (282)
                      +++..  .+++||||+.++.+
T Consensus       448 ~~~~~~~~~~~yppy~~~~~~  468 (469)
T 3sza_A          448 PLMNDEGLKVRYPPSPAKMTQ  468 (469)
T ss_dssp             CSSCCGGGGGGSSSCCC----
T ss_pred             CcccccccccccCCCCccccc
Confidence            76544  57899999987654

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=6.6e-62  Score=461.91  Aligned_cols=236  Identities=25%  Similarity=0.410  Sum_probs=224.7

Q ss_pred             hhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC
Q 023415            3 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL   82 (282)
Q Consensus         3 ~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~   82 (282)
                      +|++++||++||||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.
T Consensus       241 ~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~  319 (490)
T 2wme_A          241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ  319 (490)
T ss_dssp             HHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred             hhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCc
Confidence            467789999999999999999999999999999999999 9999999999999999999999999999999999999996


Q ss_pred             -CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           83 -ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        83 -~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                       +++++||++++.+++++.++|++++ +|+++++||...     ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       320 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~  399 (490)
T 2wme_A          320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD  399 (490)
T ss_dssp             STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred             cccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeC
Confidence             6899999999999999999999986 578999999753     258999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus       400 ~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K  477 (490)
T 2wme_A          400 DEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIK  477 (490)
T ss_dssp             CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred             CHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhcee
Confidence            99999999999999999999999999999999999999999998643  4678999999999999999999999999999


Q ss_pred             EEeEeC
Q 023415          236 AVLSRG  241 (282)
Q Consensus       236 ~v~~~~  241 (282)
                      +|+++.
T Consensus       478 ~v~i~~  483 (490)
T 2wme_A          478 SVQVEL  483 (490)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            999875

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=2.8e-60  Score=452.95  Aligned_cols=238  Identities=30%  Similarity=0.486  Sum_probs=226.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       248 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  326 (503)
T 3iwj_A          248 TAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDP  326 (503)
T ss_dssp             HHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC---CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +++++||++++.+++++.+++++++ +|+++++||...   ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~  406 (503)
T 3iwj_A          327 LEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFST  406 (503)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred             CCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCC
Confidence            6 6899999999999999999999986 578999999764   4689999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       407 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~  484 (503)
T 3iwj_A          407 EEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQ  484 (503)
T ss_dssp             HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEE
T ss_pred             HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEE
Confidence            9999999999999999999999999999999999999999998643  56789999999999999999999999999999


Q ss_pred             EeEeCC
Q 023415          237 VLSRGF  242 (282)
Q Consensus       237 v~~~~~  242 (282)
                      |+++..
T Consensus       485 v~~~~~  490 (503)
T 3iwj_A          485 VTQYIS  490 (503)
T ss_dssp             EEEECC
T ss_pred             EEEeCC
Confidence            998753

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=1.7e-60  Score=452.12  Aligned_cols=239  Identities=23%  Similarity=0.378  Sum_probs=227.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       219 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  297 (484)
T 3ros_A          219 EAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP  297 (484)
T ss_dssp             HHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            5678999999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++|++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       298 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  377 (484)
T 3ros_A          298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDN  377 (484)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHH
T ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHH
Confidence            6 6899999999999999999999986 57899999975 3579999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       378 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~  455 (484)
T 3ros_A          378 AAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVI  455 (484)
T ss_dssp             HHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEE
T ss_pred             HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEE
Confidence            99999999999999999999999999999999999999999643  5688999999999999999999999999999999


Q ss_pred             EeCCC
Q 023415          239 SRGFI  243 (282)
Q Consensus       239 ~~~~~  243 (282)
                      ++...
T Consensus       456 ~~~~~  460 (484)
T 3ros_A          456 DVTKN  460 (484)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            87643

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=7.2e-60  Score=449.78  Aligned_cols=237  Identities=24%  Similarity=0.406  Sum_probs=225.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|
T Consensus       244 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  322 (506)
T 3rh9_A          244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDG  322 (506)
T ss_dssp             HHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCT
T ss_pred             HHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CC-CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++|++++ +|+++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       323 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  402 (506)
T 3rh9_A          323 MNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE  402 (506)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred             cccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence            5 6899999999999999999999996 57899999975 33 6899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus       403 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v  480 (506)
T 3rh9_A          403 EEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTV  480 (506)
T ss_dssp             HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEE
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEE
Confidence            999999999999999999999999999999999999999999865  357899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      +++.
T Consensus       481 ~~~~  484 (506)
T 3rh9_A          481 PRGF  484 (506)
T ss_dssp             EEC-
T ss_pred             EEcC
Confidence            8875

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1.2e-59  Score=449.67  Aligned_cols=237  Identities=23%  Similarity=0.434  Sum_probs=226.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       267 ~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p  345 (520)
T 3ed6_A          267 KNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG  345 (520)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCT
T ss_pred             HHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-----CCCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +.+++||++++.++++++++|++++ +|+++++||...     ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus       346 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~  425 (520)
T 3ed6_A          346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF  425 (520)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred             ccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEe
Confidence            6 6899999999999999999999986 577999999764     46899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+  .+.+||||+|.||+|+++|++++++|++.
T Consensus       426 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~  503 (520)
T 3ed6_A          426 ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVS  503 (520)
T ss_dssp             SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred             CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhce
Confidence            9999999999999999999999999999999999999999999998754  57899999999999999999999999999


Q ss_pred             cEEeEeC
Q 023415          235 KAVLSRG  241 (282)
Q Consensus       235 k~v~~~~  241 (282)
                      |+|+++.
T Consensus       504 k~v~~~~  510 (520)
T 3ed6_A          504 KHILTNT  510 (520)
T ss_dssp             EEEEEES
T ss_pred             EEEEEcC
Confidence            9999875

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=6.5e-60  Score=448.35  Aligned_cols=236  Identities=24%  Similarity=0.396  Sum_probs=224.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       245 ~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  323 (484)
T 3ifg_A          245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG  323 (484)
T ss_dssp             HHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.++++++++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  403 (484)
T 3ifg_A          324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEE  403 (484)
T ss_dssp             TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHH
Confidence            5 6899999999999999999999986 578999999764 369999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||+..  ...+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       404 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~  481 (484)
T 3ifg_A          404 ELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC  481 (484)
T ss_dssp             HHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred             HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEE
Confidence            9999999999999999999999999999999999999999864  35688999999999999999999999999999987


Q ss_pred             Ee
Q 023415          239 SR  240 (282)
Q Consensus       239 ~~  240 (282)
                      +.
T Consensus       482 ~~  483 (484)
T 3ifg_A          482 VA  483 (484)
T ss_dssp             EE
T ss_pred             Ee
Confidence            53

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.6e-60  Score=452.95  Aligned_cols=239  Identities=28%  Similarity=0.455  Sum_probs=225.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       246 ~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  324 (517)
T 3r31_A          246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP  324 (517)
T ss_dssp             HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred             HHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC----CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +++++||++++.++++++++|++++ +|+++++||...    ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       325 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~  404 (517)
T 3r31_A          325 LDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD  404 (517)
T ss_dssp             TSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEEC
T ss_pred             CCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeC
Confidence            6 6899999999999999999999986 578999999312    368999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+||||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++|++.|
T Consensus       405 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K  482 (517)
T 3r31_A          405 DEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELK  482 (517)
T ss_dssp             CHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred             CHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence            99999999999999999999999999999999999999999999653  5688999999999999999999999999999


Q ss_pred             EEeEeCCC
Q 023415          236 AVLSRGFI  243 (282)
Q Consensus       236 ~v~~~~~~  243 (282)
                      +|+++...
T Consensus       483 ~v~~~~~~  490 (517)
T 3r31_A          483 TVYVSTGK  490 (517)
T ss_dssp             EEEECCC-
T ss_pred             EEEEcCCC
Confidence            99987643

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=2.7e-59  Score=444.96  Aligned_cols=236  Identities=25%  Similarity=0.414  Sum_probs=224.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       255 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  333 (495)
T 1wnd_A          255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP  333 (495)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred             HHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hc-CeEeeCCc-cCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VS-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~-~~~~~gg~-~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++|+++. +| +++++||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       334 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  413 (495)
T 1wnd_A          334 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE  413 (495)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence            6 5899999999999999999999986 46 79999997 5446899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v  491 (495)
T 1wnd_A          414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV  491 (495)
T ss_dssp             HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEE
T ss_pred             HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEE
Confidence            999999999999999999999999999999999999999998653  458899999999999999999999999999998


Q ss_pred             eEe
Q 023415          238 LSR  240 (282)
Q Consensus       238 ~~~  240 (282)
                      +.+
T Consensus       492 ~~~  494 (495)
T 1wnd_A          492 MVK  494 (495)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            764

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=1.6e-59  Score=445.13  Aligned_cols=247  Identities=24%  Similarity=0.395  Sum_probs=231.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||++||||||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|++++.+++.|+|
T Consensus       220 ~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  298 (474)
T 4h7n_A          220 ETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP  298 (474)
T ss_dssp             HHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCS
T ss_pred             hhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++++++. ++++++.||..+  ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       299 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~  378 (474)
T 4h7n_A          299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDV  378 (474)
T ss_dssp             SGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred             cccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCH
Confidence            6 6889999999999999999999986 577888888753  36899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKA  236 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~  236 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+...+.+||||++.||+| +++|.+++++|++.|+
T Consensus       379 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~  458 (474)
T 4h7n_A          379 EEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA  458 (474)
T ss_dssp             HHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEE
T ss_pred             HHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEE
Confidence            999999999999999999999999999999999999999999887777789999999999998 7899999999999999


Q ss_pred             EeEeCCCCCCCCc
Q 023415          237 VLSRGFIGDVPVR  249 (282)
Q Consensus       237 v~~~~~~~~~~~~  249 (282)
                      |+++......|++
T Consensus       459 v~~~~~~~~~p~w  471 (474)
T 4h7n_A          459 FLIKTNSTSDPWW  471 (474)
T ss_dssp             EEEECSSSCCTTS
T ss_pred             EEECCCCCCCCCC
Confidence            9998754444444

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-59  Score=449.71  Aligned_cols=237  Identities=29%  Similarity=0.452  Sum_probs=226.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       258 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  336 (528)
T 3u4j_A          258 EIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP  336 (528)
T ss_dssp             HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred             HHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence            5678999999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC--CCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.+++++.+++++++ +|+++++||..+.  .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  416 (528)
T 3u4j_A          337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA  416 (528)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred             CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence            6 6899999999999999999999986 5789999997644  6999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus       417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v  494 (528)
T 3u4j_A          417 DEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV  494 (528)
T ss_dssp             HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEE
T ss_pred             HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEE
Confidence            999999999999999999999999999999999999999999764  468899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      +++.
T Consensus       495 ~~~~  498 (528)
T 3u4j_A          495 HVTL  498 (528)
T ss_dssp             EEES
T ss_pred             EEeC
Confidence            9875

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=1.1e-59  Score=448.04  Aligned_cols=236  Identities=20%  Similarity=0.361  Sum_probs=224.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       257 ~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p  335 (498)
T 4f3x_A          257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD  335 (498)
T ss_dssp             HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred             HHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcC-eEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~-~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.++++++++|++++ +|+ ++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  415 (498)
T 4f3x_A          336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK  415 (498)
T ss_dssp             SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTT
T ss_pred             ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCH
Confidence            5 6899999999999999999999986 577 99999975 347999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       416 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v  493 (498)
T 4f3x_A          416 DDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI  493 (498)
T ss_dssp             SCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEE
T ss_pred             HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEE
Confidence            9999999999999999999999999999999999999999998764  48899999999999999999999999999999


Q ss_pred             eEe
Q 023415          238 LSR  240 (282)
Q Consensus       238 ~~~  240 (282)
                      ++.
T Consensus       494 ~~~  496 (498)
T 4f3x_A          494 MIN  496 (498)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            875

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=2.2e-59  Score=446.25  Aligned_cols=238  Identities=25%  Similarity=0.455  Sum_probs=224.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       245 ~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p  323 (497)
T 3k2w_A          245 KTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP  323 (497)
T ss_dssp             HHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc--C-C--CCceecceEEeeCCCCCcccccccccceeeEEee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV  154 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~--~-~--~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~  154 (282)
                      . +++++||++++.+++++++++++++ +|+++++||..  . .  .|+|++|||+.+++++|++++||+||||++|++|
T Consensus       324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~  403 (497)
T 3k2w_A          324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV  403 (497)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred             CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence            6 6899999999999999999999986 68899999973  2 2  6899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 023415          155 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  234 (282)
Q Consensus       155 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  234 (282)
                      +|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+  .+.+||||+|.||+|+++|++++++|++.
T Consensus       404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~  481 (497)
T 3k2w_A          404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEK  481 (497)
T ss_dssp             SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEE
T ss_pred             CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcce
Confidence            9999999999999999999999999999999999999999999998764  48899999999999999999999999999


Q ss_pred             cEEeEeCC
Q 023415          235 KAVLSRGF  242 (282)
Q Consensus       235 k~v~~~~~  242 (282)
                      |+|+++..
T Consensus       482 k~v~~~~~  489 (497)
T 3k2w_A          482 KTVYINEA  489 (497)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEEcc
Confidence            99998753

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=5.6e-59  Score=441.94  Aligned_cols=236  Identities=25%  Similarity=0.457  Sum_probs=224.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  317 (479)
T 2imp_A          239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP  317 (479)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C--CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L--ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~--~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      .  +++++||++++.+++|+++++++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~  397 (479)
T 2imp_A          318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL  397 (479)
T ss_dssp             TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred             cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence            5  5899999999999999999999986 57899999975 335899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+  .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v  475 (479)
T 2imp_A          398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV  475 (479)
T ss_dssp             HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEE
T ss_pred             HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEE
Confidence            9999999999999999999999999999999999999999997654  57899999999999999999999999999999


Q ss_pred             eEe
Q 023415          238 LSR  240 (282)
Q Consensus       238 ~~~  240 (282)
                      +.+
T Consensus       476 ~~~  478 (479)
T 2imp_A          476 YLQ  478 (479)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            865

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=5.6e-59  Score=442.11  Aligned_cols=236  Identities=24%  Similarity=0.431  Sum_probs=224.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  320 (481)
T 3jz4_A          242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDG  320 (481)
T ss_dssp             HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCT
T ss_pred             HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.+++++++++++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       321 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  400 (481)
T 3jz4_A          321 LDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEA  400 (481)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred             ccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHH
Confidence            5 6899999999999999999999986 57899999976 4468999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       401 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~  478 (481)
T 3jz4_A          401 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC  478 (481)
T ss_dssp             HHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred             HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEE
Confidence            99999999999999999999999999999999999999999764  4678999999999999999999999999999998


Q ss_pred             Ee
Q 023415          239 SR  240 (282)
Q Consensus       239 ~~  240 (282)
                      +.
T Consensus       479 ~~  480 (481)
T 3jz4_A          479 IG  480 (481)
T ss_dssp             EE
T ss_pred             Ee
Confidence            64

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=1.2e-59  Score=448.03  Aligned_cols=236  Identities=25%  Similarity=0.431  Sum_probs=224.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       265 ~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  343 (504)
T 3ek1_A          265 AQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG  343 (504)
T ss_dssp             HHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred             HhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +++++||++++.++++++++|++++ +|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de  422 (504)
T 3ek1_A          344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEE  422 (504)
T ss_dssp             TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHH
T ss_pred             ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHH
Confidence            5 6899999999999999999999986 57899999975 3689999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      ||+++|+++|||+++|||+|.++++++++++++|.|+||+...  ..+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus       423 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~  500 (504)
T 3ek1_A          423 VIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICS  500 (504)
T ss_dssp             HHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEE
T ss_pred             HHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEE
Confidence            9999999999999999999999999999999999999998653  56789999999999999999999999999999987


Q ss_pred             eC
Q 023415          240 RG  241 (282)
Q Consensus       240 ~~  241 (282)
                      ..
T Consensus       501 ~~  502 (504)
T 3ek1_A          501 AY  502 (504)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=2.7e-59  Score=448.84  Aligned_cols=239  Identities=25%  Similarity=0.421  Sum_probs=224.8

Q ss_pred             hhhhhc------CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415            2 AAAAKH------LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~------~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~   75 (282)
                      ++|+++      +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus       269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~  347 (538)
T 3qan_A          269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN  347 (538)
T ss_dssp             HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTT
T ss_pred             HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHh
Confidence            456677      9999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             ccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           76 FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        76 ~~~g~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      +++|+|. +++++||++++.+++++.++|+++++.+++++||..++ .|+|++|||+.+++++|++++||+||||++|++
T Consensus       348 ~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~  427 (538)
T 3qan_A          348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK  427 (538)
T ss_dssp             CCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred             ccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence            9999996 68999999999999999999999875449999998654 699999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhh
Q 023415          154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFS  232 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~  232 (282)
                      |+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+..++...+.+||||+|.||+| +++|++++++|+
T Consensus       428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft  507 (538)
T 3qan_A          428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM  507 (538)
T ss_dssp             ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGE
T ss_pred             eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhh
Confidence            9999999999999999999999999999999999999999999995444444789999999999999 999999999999


Q ss_pred             hccEEeEeC
Q 023415          233 HKKAVLSRG  241 (282)
Q Consensus       233 ~~k~v~~~~  241 (282)
                      +.|+|+++.
T Consensus       508 ~~k~v~~~~  516 (538)
T 3qan_A          508 QAKTVSEMY  516 (538)
T ss_dssp             EEEEEEEEC
T ss_pred             CeEEEEEec
Confidence            999999875

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-59  Score=445.44  Aligned_cols=235  Identities=28%  Similarity=0.441  Sum_probs=223.9

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  320 (495)
T 3b4w_A          242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP  320 (495)
T ss_dssp             HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCT
T ss_pred             HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---CCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      . +++++||++++.+++|+++++++++ +|+++++||..+.   .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       321 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~  400 (495)
T 3b4w_A          321 SDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT  400 (495)
T ss_dssp             TCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred             ccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence            5 6899999999999999999999986 5789999997643   589999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      +||||+++|+++|||+++|||+|.+++++++.++++|.|+||++.   ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       401 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~  477 (495)
T 3b4w_A          401 EEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKS  477 (495)
T ss_dssp             HHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred             HHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeE
Confidence            999999999999999999999999999999999999999999864   45789999999999999999999999999999


Q ss_pred             EeEe
Q 023415          237 VLSR  240 (282)
Q Consensus       237 v~~~  240 (282)
                      |+.+
T Consensus       478 v~~~  481 (495)
T 3b4w_A          478 VLLP  481 (495)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            9875

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=2.9e-59  Score=445.78  Aligned_cols=230  Identities=26%  Similarity=0.449  Sum_probs=220.9

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL   87 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~   87 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus       253 l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  331 (505)
T 3prl_A          253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADI  331 (505)
T ss_dssp             SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSB
T ss_pred             CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcC
Confidence            9999999999999999999999999999999999 999999999999999999999999999999999999998888899


Q ss_pred             cccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415           88 SRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS  166 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~  166 (282)
                      ||++++.+++++++++++++ +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus       332 gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~  409 (505)
T 3prl_A          332 TPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQ  409 (505)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHT
T ss_pred             CcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhC
Confidence            99999999999999999986 57899999974  6899999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      ++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus       410 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~  483 (505)
T 3prl_A          410 SDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL  483 (505)
T ss_dssp             SSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred             CCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence            9999999999999999999999999999999998653 4688999999999999999999999999999998875

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=3.5e-59  Score=446.11  Aligned_cols=236  Identities=24%  Similarity=0.388  Sum_probs=224.0

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       275 ~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd  353 (517)
T 2o2p_A          275 KSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN  353 (517)
T ss_dssp             HHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred             HHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence            4567 899999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC-CCceecceEEeeCCCCCcccccccccceeeEEeeCC-
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK-  156 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~-  156 (282)
                      |. +++++||++++.++++++++|++++ +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+| 
T Consensus       354 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  433 (517)
T 2o2p_A          354 PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG  433 (517)
T ss_dssp             TTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred             CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence            95 6899999999999999999999986 5789999997643 689999999999999999999999999999999999 


Q ss_pred             -HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          157 -IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       157 -~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                       +||||+++|+++|||+++|||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus       434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k  511 (517)
T 2o2p_A          434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIK  511 (517)
T ss_dssp             CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEE
T ss_pred             CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCce
Confidence             9999999999999999999999999999999999999999998753  4578999999999999999999999999999


Q ss_pred             EEeEe
Q 023415          236 AVLSR  240 (282)
Q Consensus       236 ~v~~~  240 (282)
                      +|+++
T Consensus       512 ~v~~~  516 (517)
T 2o2p_A          512 TVTFE  516 (517)
T ss_dssp             EEEEE
T ss_pred             EEEee
Confidence            99864

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=5.9e-59  Score=443.24  Aligned_cols=237  Identities=26%  Similarity=0.419  Sum_probs=224.3

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus       256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~  334 (501)
T 1bxs_A          256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN  334 (501)
T ss_dssp             HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred             HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence            4567 899999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +++++||++++.+++|++++|++++ +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       335 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  414 (501)
T 1bxs_A          335 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL  414 (501)
T ss_dssp             TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred             CcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence            96 6899999999999999999999986 578999999763 36899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v  492 (501)
T 1bxs_A          415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV  492 (501)
T ss_dssp             HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred             HHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEE
Confidence            999999999999999999999999999999999999999998754  457899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      +.+.
T Consensus       493 ~~~~  496 (501)
T 1bxs_A          493 TIKI  496 (501)
T ss_dssp             EEEC
T ss_pred             EEcc
Confidence            8763

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=6e-59  Score=443.60  Aligned_cols=237  Identities=27%  Similarity=0.465  Sum_probs=225.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       251 ~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  329 (503)
T 1a4s_A          251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP  329 (503)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-------CCCceecceEEeeCCCCCcccccccccceeeEE
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~  152 (282)
                      . +++++||++++.+++|+++++++++ +|+++++||...       ..|+|++|||+.+++++|++++||+||||++|+
T Consensus       330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~  409 (503)
T 1a4s_A          330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL  409 (503)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred             cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence            6 6899999999999999999999986 578999999764       358999999999999999999999999999999


Q ss_pred             eeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 023415          153 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS  232 (282)
Q Consensus       153 ~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~  232 (282)
                      +|+|+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|+
T Consensus       410 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~  487 (503)
T 1a4s_A          410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYS  487 (503)
T ss_dssp             EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSE
T ss_pred             ecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999764  4578999999999999999999999999


Q ss_pred             hccEEeEeC
Q 023415          233 HKKAVLSRG  241 (282)
Q Consensus       233 ~~k~v~~~~  241 (282)
                      +.|+|+.+.
T Consensus       488 ~~k~v~~~~  496 (503)
T 1a4s_A          488 QLKTVIVEM  496 (503)
T ss_dssp             EEEEEEECC
T ss_pred             CceEEEEcc
Confidence            999998763

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.4e-58  Score=441.65  Aligned_cols=237  Identities=24%  Similarity=0.434  Sum_probs=208.1

Q ss_pred             hhhhh--cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCC
Q 023415            2 AAAAK--HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK   79 (282)
Q Consensus         2 ~~aa~--~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g   79 (282)
                      ++|++  ++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|
T Consensus       246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G  324 (508)
T 3r64_A          246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG  324 (508)
T ss_dssp             HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred             HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence            45666  89999999999999999999999999999999999 9999999999999999999999999999999999999


Q ss_pred             CCC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           80 NPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      +|. +++++||++++.+++++++++++++ +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  402 (508)
T 3r64_A          325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDE  402 (508)
T ss_dssp             CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSH
T ss_pred             CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCH
Confidence            986 6899999999999999999999997 57899999975  6899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|++++++|++.|+|
T Consensus       403 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v  481 (508)
T 3r64_A          403 AHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI  481 (508)
T ss_dssp             HHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEE
T ss_pred             HHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEE
Confidence            9999999999999999999999999999999999999999998754 468899999999999999999999999999999


Q ss_pred             eEeCC
Q 023415          238 LSRGF  242 (282)
Q Consensus       238 ~~~~~  242 (282)
                      +++..
T Consensus       482 ~~~~~  486 (508)
T 3r64_A          482 GIKRS  486 (508)
T ss_dssp             EEECC
T ss_pred             EEecc
Confidence            98763

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=1.5e-58  Score=442.10  Aligned_cols=236  Identities=25%  Similarity=0.429  Sum_probs=224.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  337 (515)
T 2d4e_A          259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP  337 (515)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred             HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCc
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCC---------CCceecceEEeeCCCCCcccccccccceee
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLP  150 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~---------~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~  150 (282)
                      . +++++||++++.++++++++|++++ +|+++++||..+.         .|+|++|||+.+ +++|++++||+||||++
T Consensus       338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~  416 (515)
T 2d4e_A          338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLV  416 (515)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEE
T ss_pred             ccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceE
Confidence            6 5799999999999999999999986 5789999997643         589999999999 99999999999999999


Q ss_pred             EEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHH
Q 023415          151 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV  230 (282)
Q Consensus       151 v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~  230 (282)
                      |++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++
T Consensus       417 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~  494 (515)
T 2d4e_A          417 AIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDF  494 (515)
T ss_dssp             EEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHH
T ss_pred             EEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHH
Confidence            9999999999999999999999999999999999999999999999998754  56789999999999999999999999


Q ss_pred             hhhccEEeEeC
Q 023415          231 FSHKKAVLSRG  241 (282)
Q Consensus       231 ~~~~k~v~~~~  241 (282)
                      |++.|+|+.+.
T Consensus       495 ~~~~K~v~~~~  505 (515)
T 2d4e_A          495 YTDLKTIALPL  505 (515)
T ss_dssp             HEEEEEEEEES
T ss_pred             hCceeEEEEcC
Confidence            99999998874

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=8.3e-59  Score=440.75  Aligned_cols=228  Identities=32%  Similarity=0.574  Sum_probs=218.2

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD   86 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~   86 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. ++++
T Consensus       235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  313 (486)
T 3pqa_A          235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTD  313 (486)
T ss_dssp             SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred             CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCC
Confidence            9999999999999999999999999999999999 9999999999999999999999999999999999999995 6899


Q ss_pred             ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                      +||++++.++++++++++++. +|+++++||..  .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|
T Consensus       314 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN  389 (486)
T 3pqa_A          314 VGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIAN  389 (486)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHT
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHh
Confidence            999999999999999999986 57899999975  5899999999 9999999999999999999999999 99999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|||+++|||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus       390 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~  464 (486)
T 3pqa_A          390 STEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK  464 (486)
T ss_dssp             CSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred             cCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence            99999999999999999999999999999999998654 3458999999999999999999999999999999875

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=6.7e-59  Score=439.04  Aligned_cols=232  Identities=35%  Similarity=0.643  Sum_probs=220.1

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++   |
T Consensus       224 ~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p  299 (457)
T 3lns_A          224 QAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---P  299 (457)
T ss_dssp             HHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---C
T ss_pred             HHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---C
Confidence            5678999999999999999999999999999999999999 99999999999999999999999999999999987   5


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      .+. ++||++++.+++|+++++++++  +++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       300 ~~~-~~gpli~~~~~~rv~~~i~~a~--~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi  376 (457)
T 3lns_A          300 EIN-STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAI  376 (457)
T ss_dssp             STT-TTCCCSSHHHHHHHHHHHHHCC--SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHH
T ss_pred             Ccc-cccCCCCHHHHHHHHHHHHhcC--CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHH
Confidence            545 9999999999999999999763  6999999876679999999999999999999999999999999999999999


Q ss_pred             HHHhc-CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          162 DIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       162 ~~~n~-~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      +++|+ ++|||+++|||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus       377 ~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  456 (457)
T 3lns_A          377 DQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV  456 (457)
T ss_dssp             HHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred             HHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence            99999 99999999999999999999999999999999987665678999999999999999999999999999999865

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=4.8e-59  Score=443.78  Aligned_cols=237  Identities=27%  Similarity=0.399  Sum_probs=224.5

Q ss_pred             hhhh-hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa-~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|+ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~  333 (500)
T 1o04_A          255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN  333 (500)
T ss_dssp             HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred             HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence            4577 899999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +++++||++++.+++|++++|++++ +|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       334 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  413 (500)
T 1o04_A          334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI  413 (500)
T ss_dssp             TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred             cccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence            96 6899999999999999999999986 578999999764 35899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v  491 (500)
T 1o04_A          414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV  491 (500)
T ss_dssp             HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEE
T ss_pred             HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEE
Confidence            999999999999999999999999999999999999999998754  457899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      +.+.
T Consensus       492 ~~~~  495 (500)
T 1o04_A          492 TVKV  495 (500)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            8763

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=1.7e-58  Score=439.65  Aligned_cols=232  Identities=23%  Similarity=0.367  Sum_probs=219.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++||| +.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       258 ~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p  335 (497)
T 3i44_A          258 KNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG  335 (497)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred             HHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            567889999999999999999999999 999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCc-cCC---CCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~-~~~---~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +++++||++++.++++++++|++++ +|+++++||. ...   .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~  415 (497)
T 3i44_A          336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN  415 (497)
T ss_dssp             TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred             CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence            6 6899999999999999999999986 5789999994 322   68999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+||||+++|+++|||+++|||+|.++++++++++++|+|+||. .  ...+.+||||+|.||+|+++|.+++++|++.|
T Consensus       416 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K  492 (497)
T 3i44_A          416 TEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTK  492 (497)
T ss_dssp             SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEE
T ss_pred             CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhccee
Confidence            99999999999999999999999999999999999999999995 2  34578999999999999999999999999999


Q ss_pred             EEe
Q 023415          236 AVL  238 (282)
Q Consensus       236 ~v~  238 (282)
                      +|+
T Consensus       493 ~v~  495 (497)
T 3i44_A          493 AIS  495 (497)
T ss_dssp             EES
T ss_pred             EEE
Confidence            976

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.5e-59  Score=444.64  Aligned_cols=238  Identities=21%  Similarity=0.307  Sum_probs=224.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++ ++|+|+++|+++++++++|+
T Consensus       258 ~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~  336 (521)
T 4e4g_A          258 GTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP  336 (521)
T ss_dssp             HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred             HHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999 99999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-----CCCCceecceEEeeCCCCCcccccccccceeeEEe
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT  153 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-----~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~  153 (282)
                      |. +++++||++++.++++++++|++++ +|+++++||..     +..|+|++|||+.+++++|++++||+||||++|++
T Consensus       337 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~  416 (521)
T 4e4g_A          337 YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVR  416 (521)
T ss_dssp             TTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECC
T ss_pred             CCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEE
Confidence            85 6899999999999999999999986 57899999964     24689999999999999999999999999999999


Q ss_pred             eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--CcchHHHHHHh
Q 023415          154 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVF  231 (282)
Q Consensus       154 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~  231 (282)
                      |+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ...+.+||||+|.||+|  +++|++++++|
T Consensus       417 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~f  495 (521)
T 4e4g_A          417 ARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFW  495 (521)
T ss_dssp             BSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHT
T ss_pred             eCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHh
Confidence            9999999999999999999999999999999999999999999999753 34578999999999999  78999999999


Q ss_pred             hhccEEeEeC
Q 023415          232 SHKKAVLSRG  241 (282)
Q Consensus       232 ~~~k~v~~~~  241 (282)
                      ++.|+|+++.
T Consensus       496 t~~K~v~~~~  505 (521)
T 4e4g_A          496 TRTKTITSRW  505 (521)
T ss_dssp             EEEEEEEECC
T ss_pred             heEEEEEEec
Confidence            9999999864

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=1.2e-58  Score=438.02  Aligned_cols=237  Identities=24%  Similarity=0.439  Sum_probs=225.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       222 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  300 (462)
T 3etf_A          222 AQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP  300 (462)
T ss_dssp             HHHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred             HHHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +.+++||++++.++++++++++++. +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       301 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~d  380 (462)
T 3etf_A          301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAA  380 (462)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred             ccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHH
Confidence            5 6889999999999999999999986 57899999874 3578999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      |||+++|+++|||+++|||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       381 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~  458 (462)
T 3etf_A          381 HALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW  458 (462)
T ss_dssp             HHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred             HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEE
Confidence            99999999999999999999999999999999999999999764  4688999999999999999999999999999998


Q ss_pred             EeC
Q 023415          239 SRG  241 (282)
Q Consensus       239 ~~~  241 (282)
                      ++.
T Consensus       459 ~~r  461 (462)
T 3etf_A          459 KNR  461 (462)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            764

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=1.5e-58  Score=440.83  Aligned_cols=237  Identities=18%  Similarity=0.300  Sum_probs=223.3

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       257 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  335 (500)
T 2j6l_A          257 LMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP  335 (500)
T ss_dssp             HHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE  158 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~  158 (282)
                      . +++++||++++.+++|+++++++++ +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  415 (500)
T 2j6l_A          336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEE  415 (500)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHH
T ss_pred             ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHH
Confidence            6 5899999999999999999999986 57899999976 3468999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHH--hhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 023415          159 DSFDIINSGTKPLAAYLFTNNKKLKQQFV--ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  236 (282)
Q Consensus       159 eai~~~n~~~~gL~a~i~t~d~~~~~~~~--~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  236 (282)
                      |||+++|+++|||+++|||+|.+++++++  .++++|+|+||++.. ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus       416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~  494 (500)
T 2j6l_A          416 EVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST  494 (500)
T ss_dssp             HHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred             HHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence            99999999999999999999999999999  679999999998654 245689999999999999999999999999999


Q ss_pred             EeEe
Q 023415          237 VLSR  240 (282)
Q Consensus       237 v~~~  240 (282)
                      |+++
T Consensus       495 v~~~  498 (500)
T 2j6l_A          495 CTIN  498 (500)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9875

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.3e-58  Score=440.21  Aligned_cols=236  Identities=20%  Similarity=0.390  Sum_probs=202.0

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|
T Consensus       241 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~  319 (485)
T 4dng_A          241 EIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ  319 (485)
T ss_dssp             HHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred             HHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      . +++++||++++.+++++++++++++ +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e  397 (485)
T 4dng_A          320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE  397 (485)
T ss_dssp             TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred             CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence            6 6899999999999999999999986 57899999975  689999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      ||+++|+++|||+++|||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus       398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~  476 (485)
T 4dng_A          398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISI  476 (485)
T ss_dssp             HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEE
T ss_pred             HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence            99999999999999999999999999999999999999998754 56889999999999999999999999999999988


Q ss_pred             eC
Q 023415          240 RG  241 (282)
Q Consensus       240 ~~  241 (282)
                      +.
T Consensus       477 ~~  478 (485)
T 4dng_A          477 QK  478 (485)
T ss_dssp             EC
T ss_pred             ec
Confidence            75

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=1.4e-58  Score=439.76  Aligned_cols=236  Identities=25%  Similarity=0.460  Sum_probs=224.2

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh-ccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~   80 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++ ++.|+
T Consensus       246 ~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~  324 (487)
T 2w8n_A          246 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGN  324 (487)
T ss_dssp             HHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSC
T ss_pred             HHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCC
Confidence            5678899999999999999999999999999999999999 999999999999999999999999999999999 99999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCc-eecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~-~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +++++||++++.+++++++++++++ +|+++++||..++.|+ |++|||+.+++++|++++||+||||++|++|+|+
T Consensus       325 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~  404 (487)
T 2w8n_A          325 GFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTE  404 (487)
T ss_dssp             TTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCH
T ss_pred             cccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCH
Confidence            85 6899999999999999999999986 5779999998655688 9999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.++++++++++++|.|+||++..+  .+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus       405 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v  482 (487)
T 2w8n_A          405 EEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYV  482 (487)
T ss_dssp             HHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEE
T ss_pred             HHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEE
Confidence            9999999999999999999999999999999999999999997654  46799999999999999999999999999999


Q ss_pred             eEe
Q 023415          238 LSR  240 (282)
Q Consensus       238 ~~~  240 (282)
                      +.+
T Consensus       483 ~~~  485 (487)
T 2w8n_A          483 CYG  485 (487)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            865

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=3.2e-58  Score=440.03  Aligned_cols=234  Identities=24%  Similarity=0.409  Sum_probs=221.4

Q ss_pred             hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 023415            6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK   85 (282)
Q Consensus         6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~   85 (282)
                      +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus       280 ~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  358 (516)
T 1uzb_A          280 TWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENP  358 (516)
T ss_dssp             CSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCC
T ss_pred             cccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCcccc
Confidence            789999999999999999999999999999999999 9999999999999999999999999999999999999996689


Q ss_pred             cccccCCHHHHHHHHHHHHHHHhcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                      ++||++++.++++++++|+++++.+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       359 ~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a  438 (516)
T 1uzb_A          359 DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVA  438 (516)
T ss_dssp             SBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHH
Confidence            999999999999999999998765589999976 3468999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEeEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+++|||+++|||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+ ++|.+++++|++.|+|+++
T Consensus       439 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~  515 (516)
T 1uzb_A          439 NDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             HCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             hcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence            999999999999999999999999999999999997666566789999999999995 7899999999999998764

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=4.3e-58  Score=437.49  Aligned_cols=230  Identities=20%  Similarity=0.384  Sum_probs=219.9

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCCc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKD   86 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~   86 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. ++++
T Consensus       257 l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  335 (501)
T 1uxt_A          257 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVD  335 (501)
T ss_dssp             SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred             CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCc
Confidence            9999999999999999999999999999999999 9999999999999999999999999999999999999996 6899


Q ss_pred             ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCC-ceecceEEeeCC---CCCcccccccccceeeEEeeCCHHHHH
Q 023415           87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g-~~~~Ptv~~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      +||++++.++++++++++++. +|+++++||..  .| +|++|||+.+++   ++|++++||+||||++|++|+|+||||
T Consensus       336 ~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi  413 (501)
T 1uxt_A          336 VGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAI  413 (501)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHH
Confidence            999999999999999999986 46799999975  58 999999999999   999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|+++|||+++|||+|.++++++++++++|.|+||+++ +...+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus       414 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~  492 (501)
T 1uxt_A          414 ELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY  492 (501)
T ss_dssp             HHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred             HHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence            9999999999999999999999999999999999999874 335688999999999999999999999999999998874

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=9.2e-58  Score=433.58  Aligned_cols=233  Identities=26%  Similarity=0.487  Sum_probs=200.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  314 (478)
T 3ty7_A          236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP  314 (478)
T ss_dssp             CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-C---CCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~---~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      . +++++||++++.++++++++++++. +|+++++||.. .   ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~  394 (478)
T 3ty7_A          315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN  394 (478)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred             CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence            6 6899999999999999999999986 68899999842 2   368999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ .  ...+.+||||+|.||+|+++|++++++||+.|
T Consensus       395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k  471 (478)
T 3ty7_A          395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVK  471 (478)
T ss_dssp             SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEE
T ss_pred             CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeE
Confidence            99999999999999999999999999999999999999999999 3  24578999999999999999999999999999


Q ss_pred             EEe
Q 023415          236 AVL  238 (282)
Q Consensus       236 ~v~  238 (282)
                      +|+
T Consensus       472 ~v~  474 (478)
T 3ty7_A          472 SIA  474 (478)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            987

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=2.1e-57  Score=436.97  Aligned_cols=249  Identities=22%  Similarity=0.336  Sum_probs=229.5

Q ss_pred             hhhhhcCCc------EEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhh
Q 023415            2 AAAAKHLTP------VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~~~~------~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~   75 (282)
                      ++|++++||      +++|||||||+||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus       296 ~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~  374 (563)
T 4e3x_A          296 RQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR  374 (563)
T ss_dssp             HHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred             HHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence            467788885      9999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             ccCCCC-C-CCCcccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceee
Q 023415           76 FYGKNP-L-ESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLP  150 (282)
Q Consensus        76 ~~~g~~-~-~~~~~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~  150 (282)
                      +++|+| . +++++||++++.+++++.++|++++  .++++++||..+ ..|+|++|||+.+++++|++++||+||||++
T Consensus       375 l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~  454 (563)
T 4e3x_A          375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT  454 (563)
T ss_dssp             CCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEE
T ss_pred             ccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEE
Confidence            999998 5 6899999999999999999999997  467999999764 3689999999999999999999999999999


Q ss_pred             EEeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--cceEEECCCCcccCCCCCCcccCCCCCCC-Ccch
Q 023415          151 ILTVDK--IEDSFDII-NSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHG  224 (282)
Q Consensus       151 v~~~~~--~~eai~~~-n~~~~gL~a~i~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g  224 (282)
                      |++|+|  +||||+++ |+++|||+++|||+|.+++++++++++  +|+|+||+.+++...+.+||||+|.||+| +.+|
T Consensus       455 V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G  534 (563)
T 4e3x_A          455 VYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG  534 (563)
T ss_dssp             EEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTS
T ss_pred             EEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCC
Confidence            999996  79999999 789999999999999999999999975  99999999876666788999999999998 8899


Q ss_pred             HHHHHHhhhccEEeEeCCCCCCCCcCCC
Q 023415          225 KFSFDVFSHKKAVLSRGFIGDVPVRYPP  252 (282)
Q Consensus       225 ~~~l~~~~~~k~v~~~~~~~~~~~~~~~  252 (282)
                      ++++++|++.|+|..+ +..+.+++||.
T Consensus       535 ~~~l~~~~~~k~v~~~-~~~~~~~~yp~  561 (563)
T 4e3x_A          535 PHYILRWTSPQVIKET-HKPLGDWRYSY  561 (563)
T ss_dssp             TTGGGGGBCCEEEEEE-CSCCCCSSCTT
T ss_pred             HHHHHHhCceEEEEEe-CcCCCcccCCC
Confidence            9999999999999876 44455666764

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=1e-57  Score=432.77  Aligned_cols=228  Identities=26%  Similarity=0.460  Sum_probs=218.4

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL   87 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~   87 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|.+++++
T Consensus       244 ~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  322 (475)
T 1euh_A          244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADI  322 (475)
T ss_dssp             TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSB
T ss_pred             CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCcc
Confidence            9999999999999999999999999999999999 999999999999999999999999999999999999999668999


Q ss_pred             cccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415           88 SRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS  166 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~  166 (282)
                      ||++++.+++++++++++++ +|+++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus       323 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~  400 (475)
T 1euh_A          323 TPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNK  400 (475)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhC
Confidence            99999999999999999986 57799999875  5899999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEecCCHHHHHHHHhhcccceEEECC-CCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      ++|||+++|||+|.++++++++++++|.|+||+ +..+  .+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus       401 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  473 (475)
T 1euh_A          401 SEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD  473 (475)
T ss_dssp             SSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             CCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence            999999999999999999999999999999998 5543  57899999999999999999999999999999875

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=5.5e-57  Score=428.77  Aligned_cols=237  Identities=22%  Similarity=0.357  Sum_probs=222.6

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCe-EEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++| ||||++ +|+|+++|+++++++++|+
T Consensus       237 ~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~  314 (486)
T 1t90_A          237 KKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGN  314 (486)
T ss_dssp             HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSC
T ss_pred             HHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCC
Confidence            4678899999999999999999999999999999999999 999999999999 999999 9999999999999999998


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC--CCCceecceEEeeCCCCCcccccccccceeeEEeeCC
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK  156 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~  156 (282)
                      |. +++++||++++.++++++++++++. +|+++++||...  ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       315 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~  394 (486)
T 1t90_A          315 GLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN  394 (486)
T ss_dssp             TTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred             CCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence            85 6899999999999999999999986 578999998742  3589999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--CcchHHHHHHhhhc
Q 023415          157 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHK  234 (282)
Q Consensus       157 ~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~  234 (282)
                      +||||+++|+++|||+++|||+|.++++++++++++|.|+||++. +...+.+||||+|.||+|  +++|++++++|++.
T Consensus       395 ~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~  473 (486)
T 1t90_A          395 LKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRK  473 (486)
T ss_dssp             HHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEE
T ss_pred             HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhce
Confidence            999999999999999999999999999999999999999999854 334578999999999999  89999999999999


Q ss_pred             cEEeEeC
Q 023415          235 KAVLSRG  241 (282)
Q Consensus       235 k~v~~~~  241 (282)
                      |+|+.+.
T Consensus       474 k~v~~~~  480 (486)
T 1t90_A          474 KVVTARY  480 (486)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEec
Confidence            9998764

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=4e-56  Score=427.30  Aligned_cols=236  Identities=14%  Similarity=0.237  Sum_probs=219.1

Q ss_pred             hhcCCcEEEeCCCCCceEEcCCC-----CHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCC
Q 023415            5 AKHLTPVLLELGGKSPVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK   79 (282)
Q Consensus         5 a~~~~~~~lElgG~np~iV~~dA-----Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g   79 (282)
                      ++++||+++|||||||+||++||     |++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       251 a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG  329 (534)
T 2y53_A          251 VQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG  329 (534)
T ss_dssp             HTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBB
T ss_pred             hcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCC
Confidence            48999999999999999999999     99999999999999 9999999999999999999999999999999999999


Q ss_pred             CCC-CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccC-------CCCceecceEEeeCCCC--Cccccccccccee
Q 023415           80 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLL  149 (282)
Q Consensus        80 ~~~-~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~--~~i~~~E~fgPvl  149 (282)
                      +|. +++++||++++.++++++++|+++.+++++++||...       ..|+|++|||+.+++++  |++++||+||||+
T Consensus       330 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl  409 (534)
T 2y53_A          330 NPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVA  409 (534)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEE
T ss_pred             CCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEE
Confidence            996 6899999999999999999999987788999998642       35899999999999877  6899999999999


Q ss_pred             eEEeeC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ccceEEECCCCcc-------cCCCCCCcc
Q 023415          150 PILTVD---KI-----EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH-------LAVHSLPFG  212 (282)
Q Consensus       150 ~v~~~~---~~-----~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l--~~g~v~iN~~~~~-------~~~~~~pfG  212 (282)
                      +|++|+   |+     ||||+++|+++|||+++|||+|.++++++++++  ++|+|+||++...       ...+.+|||
T Consensus       410 ~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfG  489 (534)
T 2y53_A          410 SVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHG  489 (534)
T ss_dssp             EEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEEC
T ss_pred             EEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCC
Confidence            999999   99     999999999999999999999999999999999  8999999986421       235789999


Q ss_pred             cCCCCCCCCc-chHHHHHHhhhccEEeEeC
Q 023415          213 GVQESGMGAY-HGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       213 G~~~SG~G~~-~g~~~l~~~~~~k~v~~~~  241 (282)
                      |+|.||+|++ +|.+++++|++.|++...+
T Consensus       490 G~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p  519 (534)
T 2y53_A          490 GPGRAGGGEELGGLRALAFYHRRSAIQAAS  519 (534)
T ss_dssp             CSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred             CcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence            9999999999 6999999999999988764

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=1.6e-54  Score=438.59  Aligned_cols=235  Identities=19%  Similarity=0.313  Sum_probs=223.7

Q ss_pred             hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CC
Q 023415            6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ES   84 (282)
Q Consensus         6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~   84 (282)
                      +++||+++|||||||+||++|||++.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|. ++
T Consensus       773 ~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~  851 (1026)
T 4f9i_A          773 ANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPA  851 (1026)
T ss_dssp             CSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred             cCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCccccc
Confidence            578999999999999999999999999999999999 9999999999999999999999999999999999999996 68


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCC-CceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHH
Q 023415           85 KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI  163 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~-g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~  163 (282)
                      +++||++++.+++++.++|+++++.+++++||..++. |+|++|||+.++++++++++||+||||++|++|+|+||||++
T Consensus       852 t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~  931 (1026)
T 4f9i_A          852 NYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEW  931 (1026)
T ss_dssp             CSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred             CccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHH
Confidence            9999999999999999999999865699999976555 999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEeEeC
Q 023415          164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +|+++|||+++|||+|.++++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|.+..
T Consensus       932 aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A          932 ANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp             HTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred             HHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence            9999999999999999999999999999999999998776667889999999999995 68999999999999998875

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.2e-54  Score=407.02  Aligned_cols=231  Identities=19%  Similarity=0.243  Sum_probs=214.7

Q ss_pred             hhhhhcCCcE-EEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCc-HHHHHHHHHHHHhhccCC
Q 023415            2 AAAAKHLTPV-LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGK   79 (282)
Q Consensus         2 ~~aa~~~~~~-~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g   79 (282)
                      ++|++++||+ ++|||||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++ +|+|+++|++++++++.|
T Consensus       235 ~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G  313 (490)
T 3ju8_A          235 SQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVG  313 (490)
T ss_dssp             HHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBC
T ss_pred             HHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCC
Confidence            4677899998 799999999999999999999999999999 9999999999999999997 999999999999999999


Q ss_pred             C-CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeC
Q 023415           80 N-PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD  155 (282)
Q Consensus        80 ~-~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~  155 (282)
                      + |. +.+++||++++.++++++++++++. +|+++++||.. +..|+|++|||+. ++++|++++||+||||++|++|+
T Consensus       314 ~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~  392 (490)
T 3ju8_A          314 RFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS  392 (490)
T ss_dssp             CTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred             CCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence            8 75 6899999999999999999999986 57899999865 3478999999999 99999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 023415          156 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  235 (282)
Q Consensus       156 ~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  235 (282)
                      |+||||+++|+++|||+++|||+|.+++++++.++++|.|+||++.. ...+.+||||+|.||.+      ++++|++.|
T Consensus       393 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~~~~~k  465 (490)
T 3ju8_A          393 DFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSAYYAAD  465 (490)
T ss_dssp             SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEETTHHH
T ss_pred             CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHhhheeE
Confidence            99999999999999999999999999999999999999999999764 34578999999999975      478999999


Q ss_pred             EEeEeC
Q 023415          236 AVLSRG  241 (282)
Q Consensus       236 ~v~~~~  241 (282)
                      +|++..
T Consensus       466 ~v~~~~  471 (490)
T 3ju8_A          466 YCAYPV  471 (490)
T ss_dssp             HHEEEE
T ss_pred             EEEEec
Confidence            987664

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=4.7e-53  Score=426.91  Aligned_cols=231  Identities=18%  Similarity=0.313  Sum_probs=217.9

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-CCC
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESK   85 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~   85 (282)
                      ++||+++|||||||+||++|||++.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++
T Consensus       753 ~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t  831 (1001)
T 3haz_A          753 PIVPLIAETGGINAMIADATALPEQVADDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVAT  831 (1001)
T ss_dssp             CCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred             CCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccC
Confidence            48999999999999999999999999999999999 9999999999999999999999999999999999999995 689


Q ss_pred             cccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCC--HHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDI  163 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~  163 (282)
                      ++||++++.+++++.++|+++++.+++ +||..++.|+|++|||+.+  +++.+++||+||||++|++|++  ++|||++
T Consensus       832 ~~Gpli~~~~~~rv~~~i~~a~~~g~v-~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~  908 (1001)
T 3haz_A          832 HVGPVIDVEAKQRLDAHIARMKTEARL-HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRA  908 (1001)
T ss_dssp             SBCCCSCHHHHHHHHHHHHHHHHHSEE-EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHhcCeE-eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHH
Confidence            999999999999999999999876688 8888776799999999974  6788999999999999999986  7999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEeEeC
Q 023415          164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +|+++|||+++|||+|.+++++++.++++|.|+||+...+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus       909 aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~  987 (1001)
T 3haz_A          909 IERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT  987 (1001)
T ss_dssp             HHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred             HHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence            999999999999999999999999999999999999877666678999999999999 568899999999999999875

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-51  Score=392.57  Aligned_cols=226  Identities=17%  Similarity=0.200  Sum_probs=207.6

Q ss_pred             hhhhhcC--CcEEEeCCCCCceEEcCCC---CHHHHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhh
Q 023415            2 AAAAKHL--TPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELEN   75 (282)
Q Consensus         2 ~~aa~~~--~~~~lElgG~np~iV~~dA---Dl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~   75 (282)
                      ++|++++  ||+++|||||||+||++||   |++.|++.+++++| .|+||.|++++|||||++ +||+|+++|++++++
T Consensus       272 ~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~  350 (528)
T 3v4c_A          272 DLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAK  350 (528)
T ss_dssp             HHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             HHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHh
Confidence            4678889  9999999999999999999   88999999999999 999999999999999998 999999999999998


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCC---CcccccccccceeeEE
Q 023415           76 FYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPIL  152 (282)
Q Consensus        76 ~~~g~~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~i~~~E~fgPvl~v~  152 (282)
                      ++.+     +.+||++++.+.++++++++  .+|+++++||..  .|+|++|||+.+++++   |++++||+||||++|+
T Consensus       351 ~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~  421 (528)
T 3v4c_A          351 VAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVV  421 (528)
T ss_dssp             CCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEE
T ss_pred             cccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEE
Confidence            7643     68999999888888888774  467899999975  6899999999988887   8999999999999999


Q ss_pred             eeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhhcc--cceEEECCCCccc-CCCCCCccc-CCCCCCCCcc--h
Q 023415          153 TVDKIEDSFDIINSGTKPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-AVHSLPFGG-VQESGMGAYH--G  224 (282)
Q Consensus       153 ~~~~~~eai~~~n~~~~gL~a~i~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~~--g  224 (282)
                      +|+|+||||+++|+++|||+++|||+  |.+++++++++++  +|+|+||+++++. ..+.+|||| +|.||+|+++  |
T Consensus       422 ~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G  501 (528)
T 3v4c_A          422 RVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVG  501 (528)
T ss_dssp             EESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSS
T ss_pred             ecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCc
Confidence            99999999999999999999999999  8999999999998  9999999976533 458899999 9999999986  9


Q ss_pred             HHHHHHhhhccEE
Q 023415          225 KFSFDVFSHKKAV  237 (282)
Q Consensus       225 ~~~l~~~~~~k~v  237 (282)
                      ++++++|++.|++
T Consensus       502 ~~gl~~~~~~k~~  514 (528)
T 3v4c_A          502 TMSIRRFLRPVAY  514 (528)
T ss_dssp             GGGGGGGEEEEEE
T ss_pred             HHHHHHhchhHHh
Confidence            9999999999863

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=1.1e-49  Score=380.68  Aligned_cols=224  Identities=16%  Similarity=0.190  Sum_probs=202.9

Q ss_pred             hhhhhcC--CcEEEeCCCCCceEEcCCCCHH--HHHHHHHHHhcccCCCCccccCCeEEEeCC-cHHHHHHHHHHHHhhc
Q 023415            2 AAAAKHL--TPVLLELGGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENF   76 (282)
Q Consensus         2 ~~aa~~~--~~~~lElgG~np~iV~~dADl~--~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~   76 (282)
                      ++|++++  ||+++|||||||+||++|||++  .|++.+++++| .|+||.|++++|||||++ ++|+|+++|+++++++
T Consensus       239 ~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~  317 (510)
T 1ez0_A          239 NLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ  317 (510)
T ss_dssp             HHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred             HHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhc
Confidence            4677776  9999999999999999999999  99999999999 999999999999999999 9999999999999987


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHH--hcCeEeeCCccCCCCceecceEEeeCCCC---CcccccccccceeeE
Q 023415           77 YGKNPLESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPI  151 (282)
Q Consensus        77 ~~g~~~~~~~~gpli~~~~~~~i~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~i~~~E~fgPvl~v  151 (282)
                      +.         ||++++.+.+++.++++++.  +|+++++||.   .|+|++|||+.+++++   |++++||+||||++|
T Consensus       318 ~~---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v  385 (510)
T 1ez0_A          318 SP---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLI  385 (510)
T ss_dssp             CC---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEE
T ss_pred             CC---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEE
Confidence            53         67888889999999999886  3679999987   3899999999988777   999999999999999


Q ss_pred             EeeCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhhc--ccceEEECCCCccc-CCCCCCccc-CCCCCCCCc--c
Q 023415          152 LTVDKIEDSFDIINSGTKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVHL-AVHSLPFGG-VQESGMGAY--H  223 (282)
Q Consensus       152 ~~~~~~~eai~~~n~~~~gL~a~i~t~d~--~~~~~~~~~l--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~--~  223 (282)
                      ++|+|+||||+++|+++|||+++|||+|.  ++++++++++  ++|.|+||++..+. ..+.+|||| ++.||.|+.  +
T Consensus       386 ~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~  465 (510)
T 1ez0_A          386 VVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV  465 (510)
T ss_dssp             EEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSS
T ss_pred             EEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCc
Confidence            99999999999999999999999999987  7999999999  79999999875432 346899999 789998754  8


Q ss_pred             hHHHHHHhhhccEEe
Q 023415          224 GKFSFDVFSHKKAVL  238 (282)
Q Consensus       224 g~~~l~~~~~~k~v~  238 (282)
                      |.+++++|++.|++.
T Consensus       466 G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          466 GAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             SGGGGGGGEEEEEEE
T ss_pred             cHHHHHHhheEEEEc
Confidence            999999999887654

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=3.6e-47  Score=359.54  Aligned_cols=222  Identities=14%  Similarity=0.244  Sum_probs=200.1

Q ss_pred             hhhhhcCCcEEEeCC-CCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHh------
Q 023415            2 AAAAKHLTPVLLELG-GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE------   74 (282)
Q Consensus         2 ~~aa~~~~~~~lElg-G~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~------   74 (282)
                      ++|++++||+ +|+| ||||+||++|||++.|++.+++++| +|+||.|+++++||||+++||+|+++|+++..      
T Consensus       205 ~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~  282 (464)
T 3k9d_A          205 KAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDA  282 (464)
T ss_dssp             HHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHH
T ss_pred             HHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChh
Confidence            5678899999 8888 9999999999999999999999999 99999999999999999999999999999863      


Q ss_pred             -hccCCCCC--CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceee
Q 023415           75 -NFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLP  150 (282)
Q Consensus        75 -~~~~g~~~--~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~  150 (282)
                       .++.|+|.  +++++||+++..+++++.++++.+. +++++++||..             ++++++++. +|+||||++
T Consensus       283 ~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~  348 (464)
T 3k9d_A          283 EAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILA  348 (464)
T ss_dssp             HHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEE
T ss_pred             hhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEE
Confidence             34556653  5789999999999999999998765 57899998863             467788865 899999999


Q ss_pred             EEeeCCHHHHH----HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcc-------cCCCCCCcccCCCCCC
Q 023415          151 ILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH-------LAVHSLPFGGVQESGM  219 (282)
Q Consensus       151 v~~~~~~~eai----~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~  219 (282)
                      |++|+|+||||    +++|+++|||+++|||+|.+++++|+.++++|+|+||++..+       ...+.+|||| +.+|.
T Consensus       349 v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~  427 (464)
T 3k9d_A          349 FYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGG  427 (464)
T ss_dssp             EEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGT
T ss_pred             EEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCC
Confidence            99999999997    799999999999999999999999999999999999998753       2568999999 78999


Q ss_pred             CCcchHHHHHHhhhccEEeEe
Q 023415          220 GAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       220 G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |.++|..++++|++.|+|...
T Consensus       428 g~~~~~~~~~~~~~~k~v~~~  448 (464)
T 3k9d_A          428 SSSSDNIGPENLFNIRRIATG  448 (464)
T ss_dssp             CSCCSBCCGGGSEEEEEEEEC
T ss_pred             CcCCCCCCHHHheEEEEEEec
Confidence            999999999999999998754

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=6.4e-47  Score=357.64  Aligned_cols=210  Identities=18%  Similarity=0.181  Sum_probs=154.8

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC---CCCCCC
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLES   84 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~   84 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .|+| .|++++|||||+++ |+|+++|+++++++++   |+|.+ 
T Consensus       231 ~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-  306 (468)
T 1vlu_A          231 KIPVLGHADGICSIYLDEDADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-  306 (468)
T ss_dssp             CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-
T ss_pred             CCCEEeecCCccceEECCCCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-
Confidence            8999999999999999999999999999999999 9999 99999999999999 9999999999999876   65421 


Q ss_pred             CcccccCCHHHHHHHHHH-HHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHH
Q 023415           85 KDLSRIVNSNHFARLSKL-LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI  163 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~-i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~  163 (282)
                                     +++ ++++.   ++++||.    |  +.||++  ++++|++++||+||||++|++|+|+||||++
T Consensus       307 ---------------~~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  360 (468)
T 1vlu_A          307 ---------------KTAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQH  360 (468)
T ss_dssp             ---------------HHHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHH
T ss_pred             ---------------hcccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHH
Confidence                           344 55554   4667775    4  689987  7889999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEe
Q 023415          164 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVL  238 (282)
Q Consensus       164 ~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~~~~k~v~  238 (282)
                      +|+++|||+++|||+|.++++++++++++|.|+||++..  ..+.+|||     |++.||+|++ |++++++|++.|+|+
T Consensus       361 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~  437 (468)
T 1vlu_A          361 INTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQI  437 (468)
T ss_dssp             HTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEE
T ss_pred             HHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEE
Confidence            999999999999999999999999999999999999764  35778999     9999999999 999999999999998


Q ss_pred             EeCCCCCCCCcCCCCch
Q 023415          239 SRGFIGDVPVRYPPYTK  255 (282)
Q Consensus       239 ~~~~~~~~~~~~~~~~~  255 (282)
                      .+..    ..+ |||+.
T Consensus       438 ~~~~----~~r-~py~~  449 (468)
T 1vlu_A          438 RGDG----QVA-SDYLG  449 (468)
T ss_dssp             ECSS----CCS-CCC--
T ss_pred             ECCC----CcC-ccccc
Confidence            7642    344 88873

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.1e-45  Score=346.84  Aligned_cols=200  Identities=18%  Similarity=0.193  Sum_probs=167.1

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL   87 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~   87 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .| ||.|++++|||||+++||                        
T Consensus       241 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------  294 (463)
T 2h5g_A          241 GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------  294 (463)
T ss_dssp             SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred             CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------
Confidence            9999999999999999999999999999999999 99 999999999999999998                        


Q ss_pred             cccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhc
Q 023415           88 SRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS  166 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~  166 (282)
                      ||+     ++   ++++++. +|++++.|+.....++|+        +++|++++||+||||++|++|+|+||||+++|+
T Consensus       295 ~p~-----~~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~  358 (463)
T 2h5g_A          295 TPL-----FD---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHK  358 (463)
T ss_dssp             SHH-----HH---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHH
T ss_pred             hHH-----HH---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHc
Confidence            232     23   3455554 567887554322234442        578999999999999999999999999999999


Q ss_pred             CCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEeEeCC
Q 023415          167 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AY--HGKFSFDVFSHKKAVLSRGF  242 (282)
Q Consensus       167 ~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~~~~k~v~~~~~  242 (282)
                      .+|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|  ++  +|++++++|++.|+|+.+..
T Consensus       359 ~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~  436 (463)
T 2h5g_A          359 YGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD  436 (463)
T ss_dssp             HCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence            999999999999999999999999999999999764  3578999999999999  65  89999999999999988752


Q ss_pred             CCCCCCcCCCCchh
Q 023415          243 IGDVPVRYPPYTKG  256 (282)
Q Consensus       243 ~~~~~~~~~~~~~~  256 (282)
                          ..+ |||+..
T Consensus       437 ----~~r-~~y~~~  445 (463)
T 2h5g_A          437 ----HVV-SDFSEH  445 (463)
T ss_dssp             ----CCG-GGGSTT
T ss_pred             ----ccc-CCcccc
Confidence                234 666644

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=3.5e-44  Score=337.28  Aligned_cols=193  Identities=19%  Similarity=0.231  Sum_probs=161.9

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccC---CCCCCC
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLES   84 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~   84 (282)
                      +||+++|||||||+||++|||++.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++++   |+|.  
T Consensus       240 ~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~--  315 (444)
T 4ghk_A          240 RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD--  315 (444)
T ss_dssp             CSCBCCCCCCCCEEEECTTCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH--
T ss_pred             CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH--
Confidence            8999999999999999999999999999999999 9999 9999999999999999999999999999876   5431  


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           85 KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        85 ~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                                    ..++++++.             .|      ++  +++++++++||+||||++|++|+|+||||+++
T Consensus       316 --------------~~~~i~~a~-------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~a  360 (444)
T 4ghk_A          316 --------------ARAVLEAAG-------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHI  360 (444)
T ss_dssp             --------------HHHHHHHTT-------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHH
T ss_pred             --------------HHHHHHhcc-------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHH
Confidence                          245665442             12      12  35678999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEeEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+++|||++||||+|.++++++++++++|.|+||+++.  ..+.+||||.+.||+|    +++|++++++||+.|+|++.
T Consensus       361 N~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~  438 (444)
T 4ghk_A          361 NEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG  438 (444)
T ss_dssp             HHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred             HhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence            99999999999999999999999999999999999765  3578999999999988    67899999999999999876


Q ss_pred             C
Q 023415          241 G  241 (282)
Q Consensus       241 ~  241 (282)
                      .
T Consensus       439 ~  439 (444)
T 4ghk_A          439 H  439 (444)
T ss_dssp             E
T ss_pred             C
Confidence            4

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=3.8e-44  Score=335.53  Aligned_cols=191  Identities=20%  Similarity=0.295  Sum_probs=169.9

Q ss_pred             CCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCcc
Q 023415            8 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDL   87 (282)
Q Consensus         8 ~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~   87 (282)
                      +||+++|||||||+||++|||+|.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++..+        
T Consensus       228 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------  297 (427)
T 1o20_A          228 TVPVLETGVGNCHIFVDESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------  297 (427)
T ss_dssp             SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------
T ss_pred             CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------
Confidence            7999999999999999999999999999999999 9999 99999999999999999999999999886431        


Q ss_pred             cccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHhcC
Q 023415           88 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG  167 (282)
Q Consensus        88 gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~  167 (282)
                                               +.||... .+ |+ ||| .  ++++++++||+||||++|++|+|+||||+++|++
T Consensus       298 -------------------------~~gg~~~-~~-~~-Ptl-~--~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~  346 (427)
T 1o20_A          298 -------------------------VRGCEKT-RE-IV-PDV-V--PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKY  346 (427)
T ss_dssp             -------------------------EEECHHH-HH-HS-TTS-E--ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred             -------------------------eecChhh-hh-hC-Ccc-c--CCCcchhhcccccceEEEEEECCHHHHHHHHHhC
Confidence                                     1222211 12 33 885 2  4578999999999999999999999999999999


Q ss_pred             CCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEeEeC
Q 023415          168 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       168 ~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +|||+++|||+|.++++++++++++|.|+||++..  ..+.+||||.+.||+|    +++|++++++|++.|+|+...
T Consensus       347 ~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~  422 (427)
T 1o20_A          347 STGHSESILTENYSNAKKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE  422 (427)
T ss_dssp             CCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred             CCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence            99999999999999999999999999999998764  3577999999999997    467999999999999998764

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.1e-43  Score=332.74  Aligned_cols=215  Identities=21%  Similarity=0.308  Sum_probs=168.4

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|+|||||+||++|||++.|++.+++|+| +|+||.|+|+++||||+++||+|+++|+++         
T Consensus       200 ~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------  269 (452)
T 3my7_A          200 KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH---------  269 (452)
T ss_dssp             HHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------
T ss_pred             HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------
Confidence            4677899999999999999999999999999999999999 999999999999999999999999999764         


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC----CCCceecceE-------EeeCCCCCccccccccccee
Q 023415           82 LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLL  149 (282)
Q Consensus        82 ~~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~----~~g~~~~Ptv-------~~~~~~~~~i~~~E~fgPvl  149 (282)
                           .||++++.++++++++++++. .++++ +||...    ..|+|++||+       +.++++++++++ |+||||+
T Consensus       270 -----~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl  342 (452)
T 3my7_A          270 -----KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTL  342 (452)
T ss_dssp             -----TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEE
T ss_pred             -----CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEE
Confidence                 489999999999999997654 34455 576542    3589999997       668889999876 8999999


Q ss_pred             eEEeeCCHHHHHHHHhcCC----CCceEEEecCCHHHHHH---HHhhcccceEEECCCCcccCCCCCCcccCCC------
Q 023415          150 PILTVDKIEDSFDIINSGT----KPLAAYLFTNNKKLKQQ---FVETVSAGGLVINDTAVHLAVHSLPFGGVQE------  216 (282)
Q Consensus       150 ~v~~~~~~~eai~~~n~~~----~gL~a~i~t~d~~~~~~---~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~------  216 (282)
                      +|++|+|+||||+++|++.    |||+++|||+|.+++++   ++.++++|+|+||++..        |||.|.      
T Consensus       343 ~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~--------~Gg~G~~~~f~~  414 (452)
T 3my7_A          343 GMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTT--------HGGIGDLYNFNV  414 (452)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC--------------------
T ss_pred             EEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCC--------CcccccccccCc
Confidence            9999999999999999974    99999999999777766   99999999999999653        444332      


Q ss_pred             -----CCCCCcchHHHHHHhhhccEEeEeC
Q 023415          217 -----SGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       217 -----SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                           -|+|.++|...-++.+...-+++++
T Consensus       415 ~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~  444 (452)
T 3my7_A          415 APSLTLGCGSWGGNSISENVGPKHLINKKT  444 (452)
T ss_dssp             ----------------CCCCCGGGGEEEEE
T ss_pred             CceEeeeccccCCCccCCCCChhHeeeeeE
Confidence                 1667776665544444444444443

>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A

Probab=89.32  E-value=7.3  Score=35.56  Aligned_cols=78  Identities=19%  Similarity=0.327  Sum_probs=52.7

Q ss_pred             eEEeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc-cceEEECCCCcc-------cCCCCCCcccCCCCCCCC
Q 023415          150 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTAVH-------LAVHSLPFGGVQESGMGA  221 (282)
Q Consensus       150 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~-~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~  221 (282)
                      .++.++|++||++++|.-- +--.-|.++|+.   .+..+++ +|.|++..++.-       ..++-+|.+|     +.+
T Consensus       306 ~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR  376 (434)
T 1kae_A          306 RLIVTKDLAQCVEISNQYG-PEHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTA  376 (434)
T ss_dssp             EEEECSSHHHHHHHHHHHC-CSEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGG
T ss_pred             eEEEECCHHHHHHHHHHhh-hHhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCC-----cee
Confidence            5677899999999999831 235688899885   5566665 899999975321       2456677666     344


Q ss_pred             cchHHHHHHhhhccE
Q 023415          222 YHGKFSFDVFSHKKA  236 (282)
Q Consensus       222 ~~g~~~l~~~~~~k~  236 (282)
                      +.+..+.+.|...-+
T Consensus       377 ~~sgLsV~~F~K~~s  391 (434)
T 1kae_A          377 TCSSLGLADFQKRMT  391 (434)
T ss_dssp             TCCCSCGGGGEEEEE
T ss_pred             ccCCCcHHhccceee
Confidence            444556677765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-66
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-60
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-60
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	6e-58
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	3e-54
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	1e-48
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	6e-48
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	8e-45
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-16
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-14
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-06

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  211 bits (537), Expect = 3e-66
 Identities = 121/256 (47%), Positives = 171/256 (66%), Gaps = 7/256 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           MAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+    
Sbjct: 195 MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPS 253

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
              +++E LK  L++FYG++  +S+D  RI+N  HF R+  L+D+ KV     HGG  D+
Sbjct: 254 IQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKV----AHGGTWDQ 309

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
           +   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPLA Y+F+NN+
Sbjct: 310 SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNE 369

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
           K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ FSH+++ L +
Sbjct: 370 KVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429

Query: 241 GFIGDVP--VRYPPYT 254
             + +     RYPP  
Sbjct: 430 SLLNEEAHKARYPPSP 445

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  196 bits (499), Expect = 4e-60
 Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 4/242 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +AA + +L  V LELGGKSP +  S  ++  A  +     +      +C      +    
Sbjct: 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDI 308

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
           Y   +  S+        G       +    V+   F ++   ++  K  G K++ GG   
Sbjct: 309 YDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA 368

Query: 120 KNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
            ++   I PT+  DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT 
Sbjct: 369 ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTK 428

Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           +        + + AG + +N   V  A    PFGG + SG G   G++    ++  K V 
Sbjct: 429 DLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486

Query: 239 SR 240
            +
Sbjct: 487 VK 488

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  196 bits (499), Expect = 4e-60
 Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 14/256 (5%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           M  +AK +  V LELGGKSP++      L+ A R  +M  +    GQ C +   +   ++
Sbjct: 250 MEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQ-GQVCTNGTRVFVQRE 308

Query: 61  YAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 118
             P+ LE +    +    G   L    +  +++     ++   +   K  G +++ GGE 
Sbjct: 309 IMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEP 368

Query: 119 -------DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 171
                   KN   ++P +L +   D   + EEIFGP++ +L  D  E+     N+ T  L
Sbjct: 369 LTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428

Query: 172 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           A+ +FT +     +    + AG   IN     ++   +PFGG + SG G  +G+ + D +
Sbjct: 429 ASGVFTRDISRAHRVAANLEAGTCYINT--YSISPVEVPFGGYKMSGFGRENGQATVDYY 486

Query: 232 SHKKAVLSRGFIGDVP 247
           S  K V+    +GDV 
Sbjct: 487 SQLKTVIVE--MGDVD 500

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  190 bits (484), Expect = 6e-58
 Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 6/242 (2%)

Query: 2   AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 61
           AA   +L  V LELGGKSP +  +  +L  A      G +  + GQ CI+   +   +  
Sbjct: 250 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFY-HQGQCCIAASRLFVEESI 308

Query: 62  APKLLE-SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 119
             + +  S++   +   G            ++   + ++  L++  K  G K+  GG   
Sbjct: 309 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 368

Query: 120 KNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 178
            NK   I PT+  DV  D  I  EEIFGP+  I+    ++D     N+    L+A +FTN
Sbjct: 369 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTN 428

Query: 179 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
           +          + +G + +N     +     PFGG + SG G   G++ F  ++  K V 
Sbjct: 429 DIDKAITVSSALQSGTVWVNCY--SVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486

Query: 239 SR 240
            +
Sbjct: 487 IK 488

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  181 bits (460), Expect = 3e-54
 Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 3/242 (1%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +A          +E GGK+ ++ D   +  +A   +++  +G   GQ C +   +I T+ 
Sbjct: 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQG 333

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
               +LE +    E        E+ DL  +V++    ++   ++  K  G++V GG+R +
Sbjct: 334 AYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE 393

Query: 121 NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 179
            +   IAPT+  +VP  + I  EEIFGP+L ++ V    ++ ++ N     L   +++  
Sbjct: 394 GEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRK 453

Query: 180 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVL 238
           ++  +        G L  N       V   PFGG + SG  A  G   +  +F   KAV 
Sbjct: 454 REHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513

Query: 239 SR 240
            R
Sbjct: 514 ER 515

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  166 bits (420), Expect = 1e-48
 Identities = 47/238 (19%), Positives = 102/238 (42%), Gaps = 6/238 (2%)

Query: 7   HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLL 66
            +   ++ELGG  P +     +L +A  ++  G +    GQ C +   ++  +    KL+
Sbjct: 254 GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLV 312

Query: 67  ESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRI 125
           E +   L +    +P   + D+  +++ +    +   ++D    G  V  G R      +
Sbjct: 313 EEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYV 372

Query: 126 APTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 182
            PTL+       +D ++   E+F P+   + V  ++ + ++ N     L A +F  +   
Sbjct: 373 QPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 432

Query: 183 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 240
            ++ V  +  G + IND   H  +   PFGG ++SG+      ++ +  +  K ++  
Sbjct: 433 IRRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 489

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  163 bits (414), Expect = 6e-48
 Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 6/238 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
             A  +    ++LELGGK   +     +L++  + +I G +G  +GQ C +   ++  + 
Sbjct: 239 KMAGMRP---IMLELGGKDSAIVLEDADLELTAKNIIAGAFG-YSGQRCTAVKRVLVMES 294

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
            A +L+E ++ ++      NP +  D++ ++++     +  L  +D          E  +
Sbjct: 295 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL-INDANDKGATALTEIKR 353

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
               I P L   V  D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN+ 
Sbjct: 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 413

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 238
                  E +  G + IN+        + PF G ++SG G    K+S +  +  K+V+
Sbjct: 414 PRAFGIAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  155 bits (393), Expect = 8e-45
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 7/244 (2%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           ++  A  +    +ELGGK+PV+     +++     +    +  N GQ C +   I   K 
Sbjct: 233 ISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKG 291

Query: 61  YAPKLLESLKNELENFY-GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGE 117
               L+E L   +     G    ES +L  + +  H  R+ K +++ K +G  K++ GGE
Sbjct: 292 IYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 351

Query: 118 RDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 176
           + K N    APTLL    +D  I+ +E+FGP++ +   D  E   +  N     LA+ ++
Sbjct: 352 KRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVW 411

Query: 177 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 236
           T +     +    +  G   +N   +   V  +P GG + SG G     +  + ++  + 
Sbjct: 412 TKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 469

Query: 237 VLSR 240
           V+ +
Sbjct: 470 VMVK 473

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.2 bits (186), Expect = 2e-16
 Identities = 33/253 (13%), Positives = 74/253 (29%), Gaps = 50/253 (19%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           ++    + T  +LE G  +  +F            +I+       G    +   ++  K 
Sbjct: 207 ISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKI 266

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
                 +     +     K+ +E +   +                 ++   +V   E D 
Sbjct: 267 A-----KEFLPVIVEELRKHGVEVRGCEKT---------------REIVPDVVPATEDD- 305

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
                                 E    ++ I  V  ++++ + I   +   +  + T N 
Sbjct: 306 -------------------WPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 346

Query: 181 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA----YHGKFSFDVFSHKKA 236
              ++FV  + A  + +N +          FG   E G+        G       +  K 
Sbjct: 347 SNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGA--EIGISTQRFHARGPVGLRELTTYKF 404

Query: 237 VLSRGFIGDVPVR 249
           V+    +G+  VR
Sbjct: 405 VV----LGEYHVR 413

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 70.9 bits (172), Expect = 1e-14
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 132 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ--QFVET 189
           +  R      EEIFGP   I+  + + D   +       L A +    +   Q  Q +  
Sbjct: 362 ENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPR 421

Query: 190 V--SAGGLVIND--TAV---HLAVHSLPFGGVQESGMGAYHGKFSFDVF 231
           +   AG LV N   T V   +  VH  P+     S   +  G  +   +
Sbjct: 422 LEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV-GAEAIHRW 469

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (109), Expect = 2e-06
 Identities = 22/198 (11%), Positives = 47/198 (23%), Gaps = 25/198 (12%)

Query: 1   MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 60
           +          +L        ++       +  +R+ +                +I    
Sbjct: 212 VRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLIN-PK 270

Query: 61  YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 120
           ++          LE                            +   K           + 
Sbjct: 271 FSKWWEVLENLTLEG------------------------GVTIHATKDLKTAYFDKLNEL 306

Query: 121 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 180
            KL  A         +     +E     L    V   E +   IN+ +      + T NK
Sbjct: 307 GKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK 366

Query: 181 KLKQQFVETVSAGGLVIN 198
              ++F++ V + G+  N
Sbjct: 367 ANAEKFMKGVDSSGVYWN 384

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.96

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=9.6e-59  Score=440.02  Aligned_cols=237  Identities=27%  Similarity=0.430  Sum_probs=224.3

Q ss_pred             hhhhh-cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~-~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      ++|++ ++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+
T Consensus       249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~  327 (494)
T d1bxsa_         249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN  327 (494)
T ss_dssp             HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred             HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHh-cCCCcccccceEEecccchhHHHHHHHHhhhhheeeec
Confidence            34564 79999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             CC-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           81 PL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        81 ~~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      |. +++++||++++.+++++++++++++ +|+++++||.. ...|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus       328 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~  407 (494)
T d1bxsa_         328 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL  407 (494)
T ss_dssp             TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred             cCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCH
Confidence            85 7899999999999999999999986 57899998875 457899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      +|||+++|+++|||+++|||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus       408 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i  485 (494)
T d1bxsa_         408 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV  485 (494)
T ss_dssp             HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred             HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCC--cCCCCCcCccccccCChhhHHHHHHHhcceEEE
Confidence            999999999999999999999999999999999999999998764  457899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      +++.
T Consensus       486 ~~~~  489 (494)
T d1bxsa_         486 TIKI  489 (494)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9885

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-58  Score=433.11  Aligned_cols=247  Identities=48%  Similarity=0.869  Sum_probs=227.5

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      +.|++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++.++.+. |++
T Consensus       196 ~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~-~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~-g~~  273 (446)
T d1ad3a_         196 AAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFY-GED  273 (446)
T ss_dssp             HHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH-TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSC
T ss_pred             HHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh-cCCCCccccCCccccccchhHHHHHhhhhhhheee-ccc
Confidence            4678999999999999999999999999999999999999 99999999999999999999999999999998885 555


Q ss_pred             -CCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           82 -LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        82 -~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                       ++.+++||++++.+++++.+++++    ++...|+..+..++|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       274 ~~~~~~~gp~i~~~~~~~~~~~~~~----a~~~~g~~~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~ea  349 (446)
T d1ad3a_         274 AKQSRDYGRIINDRHFQRVKGLIDN----QKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEA  349 (446)
T ss_dssp             GGGCTTSCCCSCHHHHHHHHHTTTT----SCEEECCCEETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHH
T ss_pred             ccccccccchhhhhhhhhhhccccc----hhcccceeecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHH
Confidence             578999999999999998887653    455555555667889999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      |+++|+++|||+++|||+|.+++++++.++++|.|+||+++.+...+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus       350 i~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  429 (446)
T d1ad3a_         350 IQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK  429 (446)
T ss_dssp             HHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEEC
T ss_pred             HHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEc
Confidence            99999999999999999999999999999999999999987776778999999999999999999999999999999998


Q ss_pred             CCCC--CCCCcCCCCc
Q 023415          241 GFIG--DVPVRYPPYT  254 (282)
Q Consensus       241 ~~~~--~~~~~~~~~~  254 (282)
                      ++..  +.+++||||.
T Consensus       430 ~~~~~~~~~~~~pp~~  445 (446)
T d1ad3a_         430 SLLNEEAHKARYPPSP  445 (446)
T ss_dssp             CCCCCCTTGGGSSSCC
T ss_pred             cCCCCccccccCCCCC
Confidence            7654  4568899985

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-57  Score=427.46  Aligned_cols=237  Identities=24%  Similarity=0.411  Sum_probs=222.7

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++||+|+++|++.+++++.|+|
T Consensus       234 ~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~  312 (474)
T d1wnda_         234 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP  312 (474)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred             HhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcc-cCCCcccccccccccccccchhhhhhhHHHHHhhccCCc
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999988


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHHh-cC-eEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCH
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDKV-SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI  157 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~~-~~-~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~  157 (282)
                      . +++++||++++.+.+++.+++++++. ++ .++.|+..+ ..|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus       313 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~  392 (474)
T d1wnda_         313 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE  392 (474)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred             CCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCH
Confidence            5 68999999999999999999999974 55 466666553 46899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 023415          158 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  237 (282)
Q Consensus       158 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  237 (282)
                      ||||+++|+++|||+++|||+|.+++++++.++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus       393 deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v  470 (474)
T d1wnda_         393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV  470 (474)
T ss_dssp             HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEE
T ss_pred             HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCC--ccCCCCcccccccccCccCHHHHHHHcCCEEEE
Confidence            999999999999999999999999999999999999999999765  457899999999999999999999999999999


Q ss_pred             eEeC
Q 023415          238 LSRG  241 (282)
Q Consensus       238 ~~~~  241 (282)
                      ++++
T Consensus       471 ~i~~  474 (474)
T d1wnda_         471 MVKH  474 (474)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9874

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=8.7e-58  Score=433.35  Aligned_cols=234  Identities=26%  Similarity=0.398  Sum_probs=222.5

Q ss_pred             hhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-C
Q 023415            5 AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-E   83 (282)
Q Consensus         5 a~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~   83 (282)
                      ++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++++|||++++|+|++++++++.+++.|+|. .
T Consensus       253 ~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~  331 (494)
T d1o04a_         253 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDS  331 (494)
T ss_dssp             HTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTST
T ss_pred             ccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhcc-ccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccc
Confidence            4789999999999999999999999999999999999 9999999999999999999999999999999999999986 6


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-CCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHH
Q 023415           84 SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  161 (282)
Q Consensus        84 ~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai  161 (282)
                      .+++||++++.+++|+++++++++ +|+++++||... +.|+|++|||+.++++++++++||+||||++|++|+|++|||
T Consensus       332 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai  411 (494)
T d1o04a_         332 KTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV  411 (494)
T ss_dssp             TCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred             cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHH
Confidence            789999999999999999999986 578999998763 568999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEeC
Q 023415          162 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  241 (282)
Q Consensus       162 ~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  241 (282)
                      +++|+++|||+++|||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus       412 ~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~  489 (494)
T d1o04a_         412 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV  489 (494)
T ss_dssp             HHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred             HHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeC
Confidence            99999999999999999999999999999999999998765  3478999999999999999999999999999999874

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=3e-57  Score=430.32  Aligned_cols=238  Identities=26%  Similarity=0.456  Sum_probs=225.8

Q ss_pred             hhhhhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCC
Q 023415            2 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP   81 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~   81 (282)
                      ++|++++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|+|||++++++|++++.+.+++++.|+|
T Consensus       251 ~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~  329 (503)
T d1a4sa_         251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP  329 (503)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchh-ccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccc
Confidence            5688999999999999999999999999999999999999 999999999999999999999999999999999999998


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccC-------CCCceecceEEeeCCCCCcccccccccceeeEE
Q 023415           82 L-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        82 ~-~~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~  152 (282)
                      . +.+++||++++.++++++++++++. +|+++++||...       ..|+|++|||+.+++++|++++||+||||++|+
T Consensus       330 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~  409 (503)
T d1a4sa_         330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL  409 (503)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred             cccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEE
Confidence            5 6899999999999999999999996 688999998642       368999999999999999999999999999999


Q ss_pred             eeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 023415          153 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFS  232 (282)
Q Consensus       153 ~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~  232 (282)
                      +|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||
T Consensus       410 ~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t  487 (503)
T d1a4sa_         410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYS  487 (503)
T ss_dssp             EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSE
T ss_pred             EcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCC--CCCCCCccCcccCcCCcchHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999765  3478999999999999999999999999


Q ss_pred             hccEEeEeCC
Q 023415          233 HKKAVLSRGF  242 (282)
Q Consensus       233 ~~k~v~~~~~  242 (282)
                      +.|+|+++..
T Consensus       488 ~~k~v~~~~~  497 (503)
T d1a4sa_         488 QLKTVIVEMG  497 (503)
T ss_dssp             EEEEEEECCS
T ss_pred             CeEEEEEcCC
Confidence            9999999864

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.9e-57  Score=431.78  Aligned_cols=234  Identities=25%  Similarity=0.419  Sum_probs=220.6

Q ss_pred             hcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 023415            6 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK   85 (282)
Q Consensus         6 ~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~   85 (282)
                      .++||+++|||||||+||++|||+|.|++.+++++| .|+||.|++++|+|||++++|+|++++++++++++.|+.++.+
T Consensus       280 ~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~-~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~  358 (516)
T d1uzba_         280 TWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENP  358 (516)
T ss_dssp             CSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCC
T ss_pred             hhhhhheeeccCccceeeecchhHHHHHHHHhhhhc-ccCCCcccccCccccccccccchhhHHHHHHHhcccCCCcccC
Confidence            689999999999999999999999999999999999 9999999999999999999999999999999999998656788


Q ss_pred             cccccCCHHHHHHHHHHHHHHHhcCeEeeCCcc-CCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHH
Q 023415           86 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII  164 (282)
Q Consensus        86 ~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~  164 (282)
                      ++||++++.++++++++++++++.+.+++||.. +..|+|++|||+.++++++++++||+||||++|++|+|++|||+++
T Consensus       359 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~a  438 (516)
T d1uzba_         359 DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVA  438 (516)
T ss_dssp             SBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred             ccccccCHHHHHHHHHHHHHHHHCCCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHH
Confidence            999999999999999999999877767777664 4579999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcch-HHHHHHhhhccEEeEe
Q 023415          165 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG-KFSFDVFSHKKAVLSR  240 (282)
Q Consensus       165 n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g-~~~l~~~~~~k~v~~~  240 (282)
                      |+++|||+++|||+|.++++++++++++|+|+||+++++...+.+||||+|.||+|+++| .+++++||+.|+|+.+
T Consensus       439 n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r  515 (516)
T d1uzba_         439 NDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             HCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             HCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEc
Confidence            999999999999999999999999999999999998777667899999999999999875 7899999999999864

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=1e-53  Score=405.85  Aligned_cols=234  Identities=21%  Similarity=0.394  Sum_probs=215.2

Q ss_pred             hhcCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC-C
Q 023415            5 AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-E   83 (282)
Q Consensus         5 a~~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~   83 (282)
                      +.+.+|+++|||||||+||++|||+|.|++.+++++| +|+||.|++++++|||++++|+|+++|++++++++.|+|. +
T Consensus       252 ~~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~  330 (499)
T d1ky8a_         252 VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDP  330 (499)
T ss_dssp             HHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred             cccccceEEecCCCCeEEEcCCcChhhhhhhhhhhhh-ccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCc
Confidence            4467999999999999999999999999999999999 9999999999999999999999999999999999999996 6


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEE---eeCCCCCcccccccccceeeEEeeCCHHH
Q 023415           84 SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLL---LDVPRDSLIMSEEIFGPLLPILTVDKIED  159 (282)
Q Consensus        84 ~~~~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~---~~~~~~~~i~~~E~fgPvl~v~~~~~~~e  159 (282)
                      ++++||+++..+++++++++++++ +|++++.||...... +..++++   .++.++|++++||+||||++|++|+|.+|
T Consensus       331 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~e  409 (499)
T d1ky8a_         331 TVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT-YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQ  409 (499)
T ss_dssp             TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETT-EECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred             cccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccccc-ccccccccccccCCCCChhhhccccCceEEEEEcCCHHH
Confidence            889999999999999999999996 578999988765433 3344333   34567999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeE
Q 023415          160 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  239 (282)
Q Consensus       160 ai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  239 (282)
                      |++++|+++|||+++|||+|.++++++++++++|+|+||+++++ ..+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus       410 ai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~  488 (499)
T d1ky8a_         410 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF  488 (499)
T ss_dssp             HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCC-TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEE
T ss_pred             HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCC-CCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEE
Confidence            99999999999999999999999999999999999999998765 46789999999999999999999999999999999


Q ss_pred             eC
Q 023415          240 RG  241 (282)
Q Consensus       240 ~~  241 (282)
                      ++
T Consensus       489 ~~  490 (499)
T d1ky8a_         489 NY  490 (499)
T ss_dssp             EC
T ss_pred             cC
Confidence            75

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=1e-49  Score=376.00  Aligned_cols=230  Identities=25%  Similarity=0.453  Sum_probs=214.4

Q ss_pred             cCCcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCCCCCc
Q 023415            7 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD   86 (282)
Q Consensus         7 ~~~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~   86 (282)
                      ..||+++|+||+||+||++|||++.|++.+++++| +++||.|+++++||||++++++|++.++++...++.+++.+...
T Consensus       242 ~~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  320 (474)
T d1euha_         242 GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDAD  320 (474)
T ss_dssp             TTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCS
T ss_pred             ccceEEEecCCcceEEEECCCchhhHHHHHHHHHh-hCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccccc
Confidence            48999999999999999999999999999999999 99999999999999999999999999999999999888877778


Q ss_pred             ccccCCHHHHHHHHHHHHHHH-hcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHHHHh
Q 023415           87 LSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN  165 (282)
Q Consensus        87 ~gpli~~~~~~~i~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n  165 (282)
                      ++|+++....+++.+.+..+. .++..+.++.  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n  398 (474)
T d1euha_         321 ITPLIDTKSADYVEGLINDANDKGATALTEIK--REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISN  398 (474)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC--EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHhhhcccccccccCC--CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHH
Confidence            999999999999999988775 4455554433  3689999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEeEe
Q 023415          166 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       166 ~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      +++|||+++|||+|.+++++++.++++|+|+||+++.+ ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus       399 ~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  472 (474)
T d1euha_         399 KSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD  472 (474)
T ss_dssp             HSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             CCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCC-CCCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence            99999999999999999999999999999999997654 567899999999999999999999999999999875

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=9e-40  Score=309.66  Aligned_cols=222  Identities=18%  Similarity=0.221  Sum_probs=175.0

Q ss_pred             hhhhhcCCcEE--EeCCCCCceEEcCCCCHHHHH--HHHHHHhcccCCCCccccCCeEEEeCCcHH-HHHHHHHHHHhhc
Q 023415            2 AAAAKHLTPVL--LELGGKSPVVFDSGINLKVAC--RRMIMGKWGCNNGQACISPDHIITTKDYAP-KLLESLKNELENF   76 (282)
Q Consensus         2 ~~aa~~~~~~~--lElgG~np~iV~~dADl~~aa--~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d-~f~~~l~~~~~~~   76 (282)
                      ++|+++++|+.  +|||||||+||++|||++.|+  ..+++++| .|+||.|++++++||+++.++ .|++.+++.++. 
T Consensus       235 ~~aa~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~-~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~-  312 (504)
T d1ez0a_         235 NLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ-  312 (504)
T ss_dssp             HHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH-
T ss_pred             hhhhcccccccccccccccccccccccccHHHHhhhhccccchh-hccCccccccccccchhhhhHHHHhhhhhhhhhh-
Confidence            46788888754  599999999999999999874  47899999 999999999999999888654 566666665543 


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-cCeEeeCCccCCCCceecceEEee---CCCCCcccccccccceeeEE
Q 023415           77 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLD---VPRDSLIMSEEIFGPLLPIL  152 (282)
Q Consensus        77 ~~g~~~~~~~~gpli~~~~~~~i~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~---~~~~~~i~~~E~fgPvl~v~  152 (282)
                        ++  +.+.+||++++.+++++   ++.+.. +..+..||.   .+.+..|+++..   +..++++++||+||||++|+
T Consensus       313 --~~--~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~  382 (504)
T d1ez0a_         313 --QS--PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIV  382 (504)
T ss_dssp             --CC--CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEE
T ss_pred             --cc--cccccccchhhhhhhhh---hhhhhhhhhhcccccc---cccccCCccccccccccccchhhcccccCCeeeee
Confidence              22  35789999998887766   444443 456666665   344555655543   33478899999999999999


Q ss_pred             eeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhhcc--cceEEECCCCccc-----CCCCCCcccCCCCCCCCcc
Q 023415          153 TVDKIEDSFDIINSGTKPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-----AVHSLPFGGVQESGMGAYH  223 (282)
Q Consensus       153 ~~~~~~eai~~~n~~~~gL~a~i~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~~-----~~~~~pfGG~~~SG~G~~~  223 (282)
                      +|+|++|||+++|+++|||+++|||+  |..++.+++++++  +|+|+||+++++.     ..++.||||.+.||.+ ..
T Consensus       383 ~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~  461 (504)
T d1ez0a_         383 VCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SV  461 (504)
T ss_dssp             EESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SS
T ss_pred             ecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cc
Confidence            99999999999999999999999996  5568999999986  8999999976543     2234578888888855 46


Q ss_pred             hHHHHHHhhhccE
Q 023415          224 GKFSFDVFSHKKA  236 (282)
Q Consensus       224 g~~~l~~~~~~k~  236 (282)
                      |.+++++|+++.+
T Consensus       462 G~~~i~~f~r~v~  474 (504)
T d1ez0a_         462 GAEAIHRWLRPVA  474 (504)
T ss_dssp             SGGGGGGGEEEEE
T ss_pred             hHHHHHHHhchhh
Confidence            8999999976533

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-38  Score=294.21  Aligned_cols=198  Identities=17%  Similarity=0.235  Sum_probs=156.7

Q ss_pred             hhhhhcCCcEEEeCCCCC-ceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCC
Q 023415            2 AAAAKHLTPVLLELGGKS-PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN   80 (282)
Q Consensus         2 ~~aa~~~~~~~lElgG~n-p~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~   80 (282)
                      +.++++++++++|+||+| |+||++|||++.|++.+++++| .| ||.|++++|++||+++||+|+++|.+...+...++
T Consensus       208 ~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~-~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~  285 (414)
T d1o20a_         208 SFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKT-QR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEV  285 (414)
T ss_dssp             HHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH-SC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HHhhhccccceecccCCCCCeecccccchhhhhhHHHhhhh-cC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcc
Confidence            456788999999999866 5778899999999999999988 77 99999999999999999999999998887754332


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHH
Q 023415           81 PLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS  160 (282)
Q Consensus        81 ~~~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea  160 (282)
                      +.         .+.    ..                       .+.+.+...   ....+++|+||||++|++|+|+|||
T Consensus       286 ~~---------~~~----~~-----------------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEA  326 (414)
T d1o20a_         286 RG---------CEK----TR-----------------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEA  326 (414)
T ss_dssp             EE---------CHH----HH-----------------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHH
T ss_pred             cc---------chh----hh-----------------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHH
Confidence            11         000    00                       111112211   2235679999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCcccCCCCCC--CCc--chHHHHHHhhhccE
Q 023415          161 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAY--HGKFSFDVFSHKKA  236 (282)
Q Consensus       161 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~--~g~~~l~~~~~~k~  236 (282)
                      |+++|+++|||+++|||+|.++++++++++++|.|+||+++.+.  +..|||+.+.||.  |+.  +|++++++||+.|+
T Consensus       327 I~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~--~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~  404 (414)
T d1o20a_         327 IEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFT--DGGQFGFGAEIGISTQRFHARGPVGLRELTTYKF  404 (414)
T ss_dssp             HHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGC--STTTTTCSCCSCEECSSSSCCEECCTGGGEEEEE
T ss_pred             HHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCC--CCCCCCCCCceeccCCCCCCCchhHHHHhCeEEE
Confidence            99999999999999999999999999999999999999976432  3334444444443  444  38999999999999


Q ss_pred             EeEeCC
Q 023415          237 VLSRGF  242 (282)
Q Consensus       237 v~~~~~  242 (282)
                      |+++..
T Consensus       405 vv~~~~  410 (414)
T d1o20a_         405 VVLGEY  410 (414)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            987753

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.6e-29  Score=233.02  Aligned_cols=212  Identities=17%  Similarity=0.142  Sum_probs=132.3

Q ss_pred             hhhcC-CcEEEeCCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEeCCcHHHHHHHHHHHHhhccCCCCC
Q 023415            4 AAKHL-TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL   82 (282)
Q Consensus         4 aa~~~-~~~~lElgG~np~iV~~dADl~~aa~~i~~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~   82 (282)
                      ++++. +|++.++|||+|+||++|||++.|++.++.++| .+.|| |++.++++||+++++.|...+....+.-.     
T Consensus       215 v~~~~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~-~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv-----  287 (436)
T d1vlua_         215 IKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKT-NYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGV-----  287 (436)
T ss_dssp             HHHTCCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTSTTHHHHHHHHHHHHCC-----
T ss_pred             eeccccceEEEecCCccceeecccccHHHHHHHHHHHhc-cCCCc-cccccceeecHhhhhhhhhhHHHHHhCCc-----
Confidence            34444 499999999999999999999999999999999 88886 88999999999999888655544433311     


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHhcCeEeeCCccCCCCceecceEEeeCCCCCcccccccccceeeEEeeCCHHHHHH
Q 023415           83 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD  162 (282)
Q Consensus        83 ~~~~~gpli~~~~~~~i~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~  162 (282)
                         .+.  .++.........+.   ..++.        ......|++....+   ..+.+|.|+|+++|++|+|+||||+
T Consensus       288 ---~l~--~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~  348 (436)
T d1vlua_         288 ---TIH--ATKDLKTAYFDKLN---ELGKL--------TEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQ  348 (436)
T ss_dssp             ---CBE--ECHHHHHHHHHHHH---HHTCC--------CHHHHTTBC----------------CCCCEEEECCSHHHHHH
T ss_pred             ---EEE--eCHHHHHHhhhhhh---hcccc--------cccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHH
Confidence               000  11111111111111   11110        11222334332222   2367999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcccceEEECCCCcccCCCCCCccc-CCCC-CCCCcchHHHHHHhhhccEEeEe
Q 023415          163 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG-VQES-GMGAYHGKFSFDVFSHKKAVLSR  240 (282)
Q Consensus       163 ~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG-~~~S-G~G~~~g~~~l~~~~~~k~v~~~  240 (282)
                      ++|+.++|||++|||+|.+.+++|++++++|.|+||.++.......+.||+ +|-| +....+|+.|++.+|..|++...
T Consensus       349 ~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g  428 (436)
T d1vlua_         349 HINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRG  428 (436)
T ss_dssp             HHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEEC
T ss_pred             HHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEEC
Confidence            999999999999999999999999999999999999987532222344544 2433 33344799999999999998765


Q ss_pred             C
Q 023415          241 G  241 (282)
Q Consensus       241 ~  241 (282)
                      .
T Consensus       429 ~  429 (436)
T d1vlua_         429 D  429 (436)
T ss_dssp             S
T ss_pred             C
Confidence            3