Citrus Sinensis ID: 023456

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLIG
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccEEEccccEEEEEccEEEEccccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHccEEEEEEEcccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHccccccEEEEccccccccccccccccccEEcccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHcccEcccccEEEEEEccEEEcccccccEEHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccEEEEEEcccEcHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHcHHHHHHHHccccccEEEcccccHHHHHHcHHHHHHHHccccccccEEEcc
MAPYGILIWAVITAVLASILILASHVhnarrnrttsvaffhpntndggggeRVLWCAVKAIqeespdldcivytgdhdafpdSLLARAVDRFgvellhppkvVHLYRRKwieestyprftmigqsfGSVYLSWEALckftplyyfdtsgyaftyplarIFGCRVIcythyptislDMISRVregssmynnnasiaqsnwlsQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLwgipdrikrvyppcdtsglqacnpfFSQIISMDLCNTCTLLIG
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFfhpntndgggGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFgvellhppkvvhLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLIG
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLIG
***YGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLI*
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQA***************TCTLLIG
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLIG
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLIG
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPFFSQIISMDLCNTCTLLIG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
Q9XEE9 463 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.918 0.559 0.75 1e-116
Q6P312 487 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.804 0.466 0.5 3e-63
Q08B22 486 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.776 0.450 0.522 6e-63
Q3TZM9 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.893 0.512 0.454 3e-62
Q5R7Z6 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.879 0.504 0.468 3e-62
Q2TAA5 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.879 0.504 0.468 4e-62
Q7ZW24 500 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.914 0.516 0.450 6e-61
Q54DM9 505 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.783 0.437 0.486 1e-56
P53993 470 Uncharacterized glycosylt yes no 0.840 0.504 0.410 3e-50
Q8X092 556 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.723 0.366 0.438 5e-47
>sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2 Back     alignment and function desciption
 Score =  417 bits (1071), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 195/260 (75%), Positives = 221/260 (85%), Gaps = 1/260 (0%)

Query: 1   MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
           MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1   MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query: 61  IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
           IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct: 60  IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
           MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
           VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query: 241 GIPDRIKRVYPPCDTSGLQA 260
            IP+RI RVYPPCDTSGLQA
Sbjct: 240 RIPERITRVYPPCDTSGLQA 259
Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1
>sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2 Back     alignment and function description
>sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2 Back     alignment and function description
>sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1 Back     alignment and function description
>sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3 Back     alignment and function description
>sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
224119626 466 predicted protein [Populus trichocarpa] 0.900 0.545 0.792 1e-122
255574810 465 glycosyl transferase, putative [Ricinus 0.904 0.548 0.784 1e-120
449460937 463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.904 0.550 0.772 1e-118
225448485 463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.904 0.550 0.757 1e-115
356520284 456 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.890 0.550 0.771 1e-115
297823943 449 glycosyl transferase family 1 protein [A 0.900 0.565 0.748 1e-114
42569790 463 alpha-1,2-mannosyltransferase [Arabidops 0.918 0.559 0.75 1e-114
297789912 463 glycosyl transferase family 1 protein [A 0.900 0.548 0.744 1e-114
68160672 463 glycosyl transferase family 1 protein [N 0.833 0.507 0.791 1e-112
147866333 717 hypothetical protein VITISV_005430 [Viti 0.960 0.377 0.654 1e-111
>gi|224119626|ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/255 (79%), Positives = 231/255 (90%), Gaps = 1/255 (0%)

Query: 6   ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
           ++I++++T++L  IL + S  + N RR R  +V FFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 7   LVIFSLLTSLLTFILTITSREIINGRRTRQRAVGFFHPYTNDGGGGERVLWCAVKAIQEE 66

Query: 65  SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
           SPDLDC++YTGDHD+  +SL++RA+DRFGV+LL PPKVVHLY+RKWIEE++YPRFTMIGQ
Sbjct: 67  SPDLDCVIYTGDHDSSSESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQ 126

Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
           SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRVR+ 
Sbjct: 127 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVRDR 186

Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
           SSMYNN+ASIA+S WLS CKI+YYT FSWMYG VGSCA LAMVNSSWTQSHIEKLW IP 
Sbjct: 187 SSMYNNDASIARSGWLSWCKIIYYTLFSWMYGFVGSCAHLAMVNSSWTQSHIEKLWRIPS 246

Query: 245 RIKRVYPPCDTSGLQ 259
           RIKRVYPPCDTSGLQ
Sbjct: 247 RIKRVYPPCDTSGLQ 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255574810|ref|XP_002528312.1| glycosyl transferase, putative [Ricinus communis] gi|223532267|gb|EEF34070.1| glycosyl transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449460937|ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] gi|449507809|ref|XP_004163134.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225448485|ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520284|ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|297823943|ref|XP_002879854.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297325693|gb|EFH56113.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42569790|ref|NP_181548.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|347662497|sp|Q9XEE9.2|ALG11_ARATH RecName: Full=GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG11; AltName: Full=Asparagine-linked glycosylation protein 11; AltName: Full=Protein LEAF WILTING 3 gi|330254700|gb|AEC09794.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297789912|ref|XP_002862877.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297308639|gb|EFH39136.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|68160672|gb|AAY86782.1| glycosyl transferase family 1 protein [Noccaea caerulescens] Back     alignment and taxonomy information
>gi|147866333|emb|CAN79918.1| hypothetical protein VITISV_005430 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2065080 463 LEW3 "LEAF WILTING 3" [Arabido 0.918 0.559 0.75 2.1e-107
UNIPROTKB|E1BUY5 491 ALG11 "Uncharacterized protein 0.787 0.452 0.533 3e-62
UNIPROTKB|E2RR35 667 ALG11 "Uncharacterized protein 0.872 0.368 0.476 3.1e-60
RGD|1564725 492 Alg11 "ALG11, alpha-1,2-mannos 0.886 0.508 0.461 3.1e-60
UNIPROTKB|F1RMC7 492 ALG11 "Uncharacterized protein 0.872 0.5 0.488 3.9e-60
UNIPROTKB|E1B756 500 ALG11 "Uncharacterized protein 0.790 0.446 0.511 6.4e-60
FB|FBgn0037108 475 CG11306 [Drosophila melanogast 0.900 0.534 0.456 2.7e-59
UNIPROTKB|Q2TAA5 492 ALG11 "GDP-Man:Man(3)GlcNAc(2) 0.872 0.5 0.472 2.7e-59
MGI|MGI:2142632 492 Alg11 "asparagine-linked glyco 0.886 0.508 0.457 2.7e-59
ZFIN|ZDB-GENE-030131-7282 500 alg11 "asparagine-linked glyco 0.900 0.508 0.457 6.6e-58
TAIR|locus:2065080 LEW3 "LEAF WILTING 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 195/260 (75%), Positives = 221/260 (85%)

Query:     1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
             MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct:     1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query:    61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
             IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct:    60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query:   121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
             MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct:   120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query:   181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
             VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct:   180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query:   241 GIPDRIKRVYPPCDTSGLQA 260
              IP+RI RVYPPCDTSGLQA
Sbjct:   240 RIPERITRVYPPCDTSGLQA 259
GO:0005576 "extracellular region" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0005789 "endoplasmic reticulum membrane" evidence=IDA
GO:0006487 "protein N-linked glycosylation" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=IMP
UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7282 alg11 "asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XEE9ALG11_ARATH2, ., 4, ., 1, ., 1, 3, 10.750.91840.5593yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00120888
transferase, transferring glycosyl groups (466 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_XIV2606
SubName- Full=Putative uncharacterized protein; (424 aa)
    ••• 0.956
eugene3.00110811
hypothetical protein (413 aa)
    ••••0.942
eugene3.01460030
transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)
   •• • 0.494
gw1.XIV.1495.1
hypothetical protein (284 aa)
      • 0.403

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
PLN02949 463 PLN02949, PLN02949, transferase, transferring glyc 1e-179
cd03806 419 cd03806, GT1_ALG11_like, This family is most close 1e-122
>gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups Back     alignment and domain information 
 Score =  500 bits (1290), Expect = e-179
 Identities = 195/255 (76%), Positives = 226/255 (88%)

Query: 6   ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
           ++++ ++T+++  ++ +A  V  ARR+R  +V FFHP TNDGGGGERVLWCAV+AIQEE+
Sbjct: 5   LILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEEN 64

Query: 66  PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
           PDLDC++YTGDHDA PDSL ARA DRFGVELL PPKVVHL +RKWIEE TYPRFTMIGQS
Sbjct: 65  PDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQS 124

Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
            GSVYL+WEALCKFTPLY+FDTSGYAFTYPLAR+FGC+V+CYTHYPTIS DMISRVR+ S
Sbjct: 125 LGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRS 184

Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
           SMYNN+ASIA+S WLS CKI+YY  F+WMYGLVG CA LAMVNSSWT+SHIE LW IP+R
Sbjct: 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPER 244

Query: 246 IKRVYPPCDTSGLQA 260
           IKRVYPPCDTSGLQA
Sbjct: 245 IKRVYPPCDTSGLQA 259

Length = 463
>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
KOG1387 465 consensus Glycosyltransferase [Cell wall/membrane/ 100.0
PLN02949 463 transferase, transferring glycosyl groups 100.0
cd03806 419 GT1_ALG11_like This family is most closely related 100.0
cd03804 351 GT1_wbaZ_like This family is most closely related 99.7
cd03805 392 GT1_ALG2_like This family is most closely related 99.63
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.39
KOG0853 495 consensus Glycosyltransferase [Cell wall/membrane/ 99.36
cd03818 396 GT1_ExpC_like This family is most closely related 98.7
cd03809 365 GT1_mtfB_like This family is most closely related 98.59
cd04955 363 GT1_like_6 This family is most closely related to 98.56
cd03820 348 GT1_amsD_like This family is most closely related 98.41
cd03811 353 GT1_WabH_like This family is most closely related 98.36
cd03801 374 GT1_YqgM_like This family is most closely related 98.33
cd04962 371 GT1_like_5 This family is most closely related to 98.32
PLN02871 465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 98.25
cd03802 335 GT1_AviGT4_like This family is most closely relate 98.13
cd03819 355 GT1_WavL_like This family is most closely related 98.11
PRK10307 412 putative glycosyl transferase; Provisional 98.11
cd03823 359 GT1_ExpE7_like This family is most closely related 98.07
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 98.05
PRK09922 359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 98.05
cd03822 366 GT1_ecORF704_like This family is most closely rela 98.04
cd03795 357 GT1_like_4 This family is most closely related to 98.04
cd03807 365 GT1_WbnK_like This family is most closely related 98.01
cd03812 358 GT1_CapH_like This family is most closely related 97.98
cd03798 377 GT1_wlbH_like This family is most closely related 97.98
cd03817 374 GT1_UGDG_like This family is most closely related 97.97
cd03796 398 GT1_PIG-A_like This family is most closely related 97.92
cd03821 375 GT1_Bme6_like This family is most closely related 97.9
cd03814 364 GT1_like_2 This family is most closely related to 97.87
PRK15179 694 Vi polysaccharide biosynthesis protein TviE; Provi 97.84
cd03794 394 GT1_wbuB_like This family is most closely related 97.81
cd03825 365 GT1_wcfI_like This family is most closely related 97.76
cd03808 359 GT1_cap1E_like This family is most closely related 97.73
cd03799 355 GT1_amsK_like This is a family of GT1 glycosyltran 97.69
TIGR03088 374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 97.68
PRK10125 405 putative glycosyl transferase; Provisional 97.65
cd03800 398 GT1_Sucrose_synthase This family is most closely r 97.62
TIGR03449 405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 97.59
cd04951 360 GT1_WbdM_like This family is most closely related 97.58
TIGR02149 388 glgA_Coryne glycogen synthase, Corynebacterium fam 97.41
PRK00726 357 murG undecaprenyldiphospho-muramoylpentapeptide be 97.18
cd03785 350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 97.15
cd05844 367 GT1_like_7 Glycosyltransferases catalyze the trans 97.05
cd03816 415 GT1_ALG1_like This family is most closely related 96.97
cd03792 372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 96.51
TIGR02472 439 sucr_P_syn_N sucrose-phosphate synthase, putative, 96.27
PLN02275 371 transferase, transferring glycosyl groups 96.17
TIGR01133 348 murG undecaprenyldiphospho-muramoylpentapeptide be 95.85
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 95.81
cd03791 476 GT1_Glycogen_synthase_DULL1_like This family is mo 95.19
TIGR03087 397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 95.17
cd04949 372 GT1_gtfA_like This family is most closely related 94.76
PRK15490 578 Vi polysaccharide biosynthesis protein TviE; Provi 94.57
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 93.57
PRK00654 466 glgA glycogen synthase; Provisional 92.05
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 91.97
PRK15484 380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 91.26
PRK15427 406 colanic acid biosynthesis glycosyltransferase WcaL 90.95
TIGR02095 473 glgA glycogen/starch synthases, ADP-glucose type. 89.34
PRK13609 380 diacylglycerol glucosyltransferase; Provisional 88.83
PRK05749 425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 88.44
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 85.02
PHA01630 331 putative group 1 glycosyl transferase 84.94
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 84.71
PF08660170 Alg14: Oligosaccharide biosynthesis protein Alg14 83.15
PRK10017 426 colanic acid biosynthesis protein; Provisional 82.57
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 81.16
cd03813 475 GT1_like_3 This family is most closely related to 80.23
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-63  Score=461.07  Aligned_cols=231  Identities=38%  Similarity=0.724  Sum_probs=212.9

Q ss_pred             CCCCcEEEEEccCCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhccccceeecCCC-eEEEccccc
Q 023456           31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPP-KVVHLYRRK  109 (282)
Q Consensus        31 ~~~~~~VafvHp~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~l~~~~-~fv~l~~~~  109 (282)
                      ++...+|||||||||+|||||||||+|++++|+.||++..+|||++.+.++++|+++++..|++++++.. +||+|+.|.
T Consensus        40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~  119 (465)
T KOG1387|consen   40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRY  119 (465)
T ss_pred             hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeee
Confidence            3445689999999999999999999999999999999999999999999999999999999999998764 999999999


Q ss_pred             eeecccCCchhhhhHHHHHHHHHHHHHhcCCCcEEEECCCCccccceecc-cCCeeEEEeecCCchhhhhhhhhhccccc
Q 023456          110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMY  188 (282)
Q Consensus       110 ~l~~~~~p~~tl~~q~l~~~~la~eal~~~~pDv~Ids~g~af~~pv~~~-~~~~~i~Y~HyP~is~dml~~v~~~~~~~  188 (282)
                      |+++++|++||+++|++|+|.+|+||+.+++||+||||+|+||++|+++. .+.|+++|+|||+||+|||.++.+|+-  
T Consensus       120 lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~--  197 (465)
T KOG1387|consen  120 LVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQK--  197 (465)
T ss_pred             eeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhh--
Confidence            99999999999999999999999999999999999999999999999984 999999999999999999999987532  


Q ss_pred             ccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccCCCCC----
Q 023456          189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQACNPF----  264 (282)
Q Consensus       189 ~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~~r~~~VvYPPVd~~~f~~~~~~----  264 (282)
                              ++++++.|..|||+|+.+|.++|+.+|.+|+||+||++||+++|++ ++..+|||||||+..++....    
T Consensus       198 --------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~te~~r  268 (465)
T KOG1387|consen  198 --------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGTEGER  268 (465)
T ss_pred             --------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhcccCCc
Confidence                    3478899999999999999999999999999999999999999995 678999999999977665433    


Q ss_pred             CcceEEEe
Q 023456          265 FSQIISMD  272 (282)
Q Consensus       265 ~~~~~s~~  272 (282)
                      +.+++|++
T Consensus       269 ~~~ll~l~  276 (465)
T KOG1387|consen  269 ENQLLSLA  276 (465)
T ss_pred             ceEEEEEe
Confidence            46688875

>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] Back     alignment and domain information
>PRK10017 colanic acid biosynthesis protein; Provisional Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
3fro_A 439 GLGA glycogen synthase; glycosyltransferase family 98.69
2gek_A 406 Phosphatidylinositol mannosyltransferase (PIMA); G 98.5
2iw1_A 374 Lipopolysaccharide core biosynthesis protein RFAG; 98.5
3okp_A 394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 98.5
2r60_A 499 Glycosyl transferase, group 1; rossmann-fold; 1.80 98.48
3c48_A 438 Predicted glycosyltransferases; retaining glycosyl 98.46
2iuy_A 342 Avigt4, glycosyltransferase; antibiotics, family G 98.34
2jjm_A 394 Glycosyl transferase, group 1 family protein; anth 98.24
2x6q_A 416 Trehalose-synthase TRET; biosynthetic protein; 2.2 98.23
3oy2_A 413 Glycosyltransferase B736L; rossmann fold, GDP-mann 97.96
2qzs_A 485 Glycogen synthase; glycosyl-transferase, GT-B fold 97.72
1rzu_A 485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 97.64
2x0d_A 413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 97.27
1f0k_A 364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 96.96
3s28_A 816 Sucrose synthase 1; glycosyltransferase, sucrose m 96.27
3beo_A 375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 94.18
2hy7_A 406 Glucuronosyltransferase GUMK; glycosyltransferases 92.65
2vsy_A 568 XCC0866; transferase, glycosyl transferase, GT-B, 92.13
3otg_A 412 CALG1; calicheamicin, TDP, structural genomics, PS 91.67
4fzr_A 398 SSFS6; structural genomics, PSI-biology, protein s 81.55
1vgv_A 384 UDP-N-acetylglucosamine 2-epimerase; structural ge 80.4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
Probab=98.69  E-value=4.8e-07  Score=83.63  Aligned_cols=208  Identities=14%  Similarity=0.028  Sum_probs=107.0

Q ss_pred             CCcEEEEEccCCC--CCCchhHHHHHHHHHHHHhCCCCcEEEEcCcCCCChhhHHHhhcccccee--------ecCCCeE
Q 023456           33 RTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE--------LLHPPKV  102 (282)
Q Consensus        33 ~~~~VafvHp~l~--~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~~~~~~~i~~~v~~~f~~~--------l~~~~~f  102 (282)
                      |+|||.++.+...  ..||+|+++.+.+++|.+.  |++|.++|...+...+...+..+. |+..        ....+..
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gv~v   77 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL--GHEVLVFTPSHGRFQGEEIGKIRV-FGEEVQVKVSYEERGNLRI   77 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT--TCEEEEEEECTTCSCCEEEEEEEE-TTEEEEEEEEEEEETTEEE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhccccc-cCcccceeeeeccCCCceE
Confidence            5799999997743  3799999999999999999  999999986643211110000000 1100        1111222


Q ss_pred             EEccccceeec-ccCCch-hh-hhHH--H-HHHHHHHHHH--hcCCCcEEEECCCCccccce-e-cccCCeeEEEeecCC
Q 023456          103 VHLYRRKWIEE-STYPRF-TM-IGQS--F-GSVYLSWEAL--CKFTPLYYFDTSGYAFTYPL-A-RIFGCRVICYTHYPT  172 (282)
Q Consensus       103 v~l~~~~~l~~-~~~p~~-tl-~~q~--l-~~~~la~eal--~~~~pDv~Ids~g~af~~pv-~-~~~~~~~i~Y~HyP~  172 (282)
                      ..++. ....+ ..++.. .- ..+.  + ..+...++.+  ...+||++......+...+. + +..+.|++..+|.+.
T Consensus        78 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~  156 (439)
T 3fro_A           78 YRIGG-GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN  156 (439)
T ss_dssp             EEEES-GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred             EEecc-hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence            23222 11111 112100 00 1111  1 1111122222  24579977765322211121 2 237899999999875


Q ss_pred             chhhhhhhhhhcccccccchhhhccchhhHHHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcC
Q 023456          173 ISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYP  251 (282)
Q Consensus       173 is~dml~~v~~~~~~~~~~~~i~~~~~~s~~k~~Y~~~~~~l~~~~~~~~D~vlvNSs~T~~~Ik~~~~~-~r~~~VvYP  251 (282)
                      .. .+-..            ........    ...+.....++....+.+|.++++|..+++.....++. ..+..|++.
T Consensus       157 ~~-~~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n  219 (439)
T 3fro_A          157 KS-KLPAF------------YFHEAGLS----ELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN  219 (439)
T ss_dssp             CC-CEEHH------------HHHHTTCG----GGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC
T ss_pred             cc-cCchH------------HhCccccc----cccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCC
Confidence            21 00000            00000000    00000000122333446999999999999997776643 367899999


Q ss_pred             CCCCCcccCC
Q 023456          252 PCDTSGLQAC  261 (282)
Q Consensus       252 PVd~~~f~~~  261 (282)
                      ++|.+.|.+.
T Consensus       220 gvd~~~~~~~  229 (439)
T 3fro_A          220 GIDCSFWNES  229 (439)
T ss_dssp             CCCTTTSCGG
T ss_pred             CCCchhcCcc
Confidence            9999988765
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d2iw1a1 370 Lipopolysaccharide core biosynthesis protein RfaG 97.98
d2bisa1 437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 97.47
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=0.00013  Score=62.49  Aligned_cols=39  Identities=23%  Similarity=0.160  Sum_probs=33.6

Q ss_pred             EEEEEcc-CCCCCCchhHHHHHHHHHHHHhCCCCcEEEEcCcC
Q 023456           36 SVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH   77 (282)
Q Consensus        36 ~VafvHp-~l~~~GGgErVl~~a~~aL~~~~p~~~v~IYT~~~   77 (282)
                      .|||+.. |+. .||+||.+...+++|.+.  |++|.|+|...
T Consensus         1 ~i~f~~~~y~p-~GG~e~~~~~la~~L~~~--G~~V~v~~~~~   40 (370)
T d2iw1a1           1 IVAFCLYKYFP-FGGLQRDFMRIASTVAAR--GHHVRVYTQSW   40 (370)
T ss_dssp             CEEEECSEECT-TCHHHHHHHHHHHHHHHT--TCCEEEEESEE
T ss_pred             CEEEEecCCCC-CCCHHHHHHHHHHHHHHC--CCEEEEEecCC
Confidence            3788885 555 699999999999999999  99999998654
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure