Citrus Sinensis ID: 023541

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
Protein Sequence
MAKTTLKLPFSLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHccccccEEEEEccccccccccccccccccEEEEEEEEEcccccEEEEEEEEccccccEEccccccccccccccccccccccccccccEEEEEccccccccHHHHHcccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHcccEEEEEcccccccccccEEEEEEcccccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHcccHHHEEcccccccccccccccccccccHHHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEEEccccccEEEEEEEEccccccccccccEEEccccccccccccccHHHccccEEEEEccccccccHHHHHHccccccccEEEEEEcccHcccccHHHcccccccccHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHccccEEEEEEEccccccccEEEEEEccEEcccccccEEEEEEc
Coil and Loop (DISEMBL)
makttlklpfslLFFTSLTLTLAILTLTAAetaayptipgtmptgcslseeevptpvrrevyengqiydithritsdmpsfgskeglgqylwlpksikngslannsemklpshtgthvdapghvfdhyfdagydvdtldlgvlngpallvdvprdkniTAEVMeslniprgVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYlsaaahddllpshyefleGREVILVEGlkldgvpaglynIHCLHLRllgaegspircilik
Flexible Loop (DISEMBL)
makttlklpfsLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAevmeslniprgvrrVIFRtlntdrklmfkreFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLrllgaegspircilik
Low Complexity Region (SEG)
MAKttlklpfsllfftsltltlailtltaaetaayptIPGTMPTGCSLSeeevptpvrrevyeNGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK
Disordered region (IsUnstruct)
*****LKLPFSLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTGCS*********VRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSI*******************HVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILI*
Disordered Region (DISOPRED)
******KLPFSLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTG****************YENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK
Disordered Region (DISEMBL)
MAKTTLKLPFSLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK
Disordered Region (DISPRO)
****TLKLPFSLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKTTLKLPFSLLFFTSLTLTLAILTLTAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	281	2.2.26 [Sep-21-2011]
Q2S2F5	212	Kynurenine formamidase OS	yes	no	0.633	0.839	0.311	2e-13
Q736W4	209	Kynurenine formamidase OS	yes	no	0.704	0.947	0.301	9e-13
A9VHP8	209	Kynurenine formamidase OS	yes	no	0.722	0.971	0.296	2e-12
Q81CK1	209	Kynurenine formamidase OS	yes	no	0.604	0.813	0.327	3e-12
A4IT60	209	Kynurenine formamidase OS	no	no	0.701	0.942	0.299	5e-12
Q63AJ1	209	Kynurenine formamidase OS	yes	no	0.604	0.813	0.322	1e-11
Q81PP9	209	Kynurenine formamidase OS	yes	no	0.701	0.942	0.295	1e-11
A7GPY2	209	Kynurenine formamidase OS	yes	no	0.604	0.813	0.306	1e-11
A0REX1	209	Kynurenine formamidase OS	yes	no	0.604	0.813	0.322	2e-11
Q2N5X0	216	Kynurenine formamidase OS	yes	no	0.704	0.916	0.258	2e-11

>sp|Q2S2F5|KYNB_SALRD Kynurenine formamidase OS=Salinibacter ruber (strain DSM 13855 / M31) GN=kynB PE=3 SV=1

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 18/196 (9%)

Query: 89  QYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPAL 148
           Q+ W  +  ++ S  N   ++L +HTGTHVDAP HV       G   D L L    GPA 
Sbjct: 24  QWTWTARRNEDESSVNLGSLRLSTHTGTHVDAPLHVKRQ----GQATDDLPLDSFVGPAR 79

Query: 149 LVDVPRDKNITAEVMESLNIPR----GVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGA 204
           +VDV    N  A  +   +I +       RV+F+T +    +    E+  + V    D  
Sbjct: 80  VVDV----NANAPSVRPEHIGQLDGASAERVLFKTSS---GVSPDDEWPDAVVPIQPDTI 132

Query: 205 RWLVQNTDIKLVGIDYLSAAAHDDL-LPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCL 263
             L  +  + LVG D  S    D   LP+H+  L+   ++ +EGL L  VP G Y +  L
Sbjct: 133 HALA-DAGVSLVGTDAPSVDPLDSTDLPAHHALLD-TGIVNLEGLVLTNVPPGRYELIAL 190

Query: 264 HLRLLGAEGSPIRCIL 279
            L+++G + +P+R +L
Sbjct: 191 PLKIVGGDAAPVRAVL 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.
Salinibacter ruber (strain DSM 13855 / M31) (taxid: 309807)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9

>sp|Q736W4|KYNB_BACC1 Kynurenine formamidase OS=Bacillus cereus (strain ATCC 10987) GN=kynB PE=3 SV=1

 Score = 74.3 bits (181), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 14/212 (6%)

Query: 69  DITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHY 128
           DI+  + +D+ ++         +  PK  ++GS+ N  ++ +  HTGTH+DAP H FD  
Sbjct: 8   DISQPLNNDIATWPGDTPFSYEVSWPKE-ESGSV-NVGKLTMSIHTGTHIDAPFH-FD-- 62

Query: 129 FDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMF 188
            + G  V  LD+ V  GP  ++DV   ++I  + +E+ N+  GV R++ RT +  +    
Sbjct: 63  -NEGKKVIDLDIQVYVGPVRIIDVSNLESIGKKELENFNL-EGVERLLLRTSSHGKV--- 117

Query: 189 KREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDL-LPSHYEFLEGREVILVEG 247
             EF         D A +L +   I+L+G+D  S    DD  L +H++  +   + ++E 
Sbjct: 118 -NEFPDVIPHLHADIAPFLSEKG-IRLIGVDVPSVDPLDDKELEAHHQLFK-HGIHILEN 174

Query: 248 LKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
           + LD V  G Y +  L L L  A+GSP+R ++
Sbjct: 175 VVLDHVADGDYELIALPLALTDADGSPVRAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus (strain ATCC 10987) (taxid: 222523)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A9VHP8|KYNB_BACWK Kynurenine formamidase OS=Bacillus weihenstephanensis (strain KBAB4) GN=kynB PE=3 SV=1

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 16/219 (7%)

Query: 63  ENGQIYDITHRITSDMPSF-GSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAP 121
           +  Q  DI+  + +D+ ++ G      +  W   S +N    N  ++ +  HTGTH+DAP
Sbjct: 2   KTSQWIDISQPLNNDIATWPGDTPFSYEVSW---SKENSGSVNVGKLTMSIHTGTHIDAP 58

Query: 122 GHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLN 181
            H FD   + G  V  LD+ V  GPA ++DV   ++I  + +E+ ++  GV R++ RT +
Sbjct: 59  FH-FD---NDGKKVLDLDIQVYVGPARIIDVSNLESIGKKELENFHL-EGVERLLLRTSS 113

Query: 182 TDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDL-LPSHYEFLEGR 240
             +      EF         D A +L +   I+L+G+D  S    DD  L +H++  +  
Sbjct: 114 HGKA----NEFPDVIPHLRADIAAFLSEKG-IRLIGVDVPSVDPLDDKELAAHHQLFK-H 167

Query: 241 EVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
            + ++E + LD V  G Y +  L L L  A+GSP+R ++
Sbjct: 168 GIHILENVVLDHVVDGDYELIALPLALTDADGSPVRAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q81CK1|KYNB_BACCR Kynurenine formamidase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=kynB PE=1 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 13/183 (7%)

Query: 98  KNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKN 157
           ++GS+ N  ++ +  HTGTH+DAP H FD   + G  V  LD+ V  GPA ++DV   ++
Sbjct: 36  ESGSV-NVGKLTMSIHTGTHIDAPFH-FD---NDGKKVLDLDVQVYVGPARIIDVSNLES 90

Query: 158 ITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVG 217
           I  + +ES ++  GV R++ RT +  +      EF         D A +L +   I+L+G
Sbjct: 91  IGKKELESFHL-EGVERLLLRTSSHGKA----EEFPEVIPHLRADIASFLSEKG-IRLIG 144

Query: 218 IDYLSAAAHDDL-LPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIR 276
           +D  S    DD  L +H++  +   + ++E + LD V  G Y +  L L L  A+GSP+R
Sbjct: 145 VDVPSVDPLDDKELAAHHQLFK-HGIHILENVVLDHVADGDYELIALPLALTDADGSPVR 203

Query: 277 CIL 279
            ++
Sbjct: 204 AVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus (strain ATCC 14579 / DSM 31) (taxid: 226900)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A4IT60|KYNB_GEOTN Kynurenine formamidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=kynB PE=3 SV=1

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 20/217 (9%)

Query: 69  DITHRITSDMPSF-GSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDH 127
           DI+ R+   +P + G      +  W     ++GS+ N  ++ + +HTGTH+DAP H FD 
Sbjct: 7   DISQRLDEHIPVWPGDTPFSYRTRW--NKAESGSV-NVGQITMSTHTGTHIDAPFH-FD- 61

Query: 128 YFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLM 187
             + G  V  LDL +  GPA ++ +   K I  + ++++++  GV R++  T     +  
Sbjct: 62  --NEGKRVIDLDLNIYIGPARVIHLSNPKKIGIDELQTIDL-HGVTRLLIYTGAWTNRTT 118

Query: 188 FKREF---DSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVIL 244
           F       D     ++K   ++ V+   I L  +D L++      LP+H+E L    + +
Sbjct: 119 FPETIPYIDPPLAPYLK---KYGVRLIGIDLPSVDPLTSKQ----LPAHHE-LHRCGIHI 170

Query: 245 VEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
           +EGL LD V  G Y +  L L L+ A+GSP+R  L K
Sbjct: 171 LEGLVLDHVSPGDYELAALPLPLVNADGSPVRAALRK 207

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Geobacillus thermodenitrificans (strain NG80-2) (taxid: 420246)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q63AJ1|KYNB_BACCZ Kynurenine formamidase OS=Bacillus cereus (strain ZK / E33L) GN=kynB PE=3 SV=1

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 13/183 (7%)

Query: 98  KNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKN 157
           ++GS+ N  ++ +  HTGTH+DAP H FD   + G  V  LD+ V  GPA ++DV   ++
Sbjct: 36  ESGSV-NVGKLTMSIHTGTHIDAPFH-FD---NEGKKVIDLDVQVYVGPARIIDVSNLES 90

Query: 158 ITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVG 217
           I  + +E+ ++  GV R++ RT +  +      EF         D A +L +   I+L+G
Sbjct: 91  IGKKELENFHL-EGVERLLLRTSSHGKA----NEFPDVIPHLRADIAPFLSEKG-IRLIG 144

Query: 218 IDYLSAAAHDDL-LPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIR 276
           +D  S    DD  L +H++  +   + ++E + LD V  G Y +  L L L  A+GSP+R
Sbjct: 145 VDVPSVDPLDDKELAAHHQLFK-HGIHILENVVLDHVADGDYELIALPLALSDADGSPVR 203

Query: 277 CIL 279
            ++
Sbjct: 204 AVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus (strain ZK / E33L) (taxid: 288681)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q81PP9|KYNB_BACAN Kynurenine formamidase OS=Bacillus anthracis GN=kynB PE=3 SV=1

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 16/213 (7%)

Query: 69  DITHRITSDMPSF-GSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDH 127
           DI+  + +D+ ++ G      + LW   S +     N  ++ +  HTGTH+DAP H FD 
Sbjct: 8   DISQPLNNDIATWPGDTPFSYEVLW---SKEESGSVNVGKLTMSIHTGTHIDAPFH-FD- 62

Query: 128 YFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLM 187
             + G  V  LD+ V  GP  ++DV   ++I  + +E  ++  GV R++ RT +  +   
Sbjct: 63  --NDGKKVLDLDIQVYVGPTRIIDVSNLESIGKKELEKFHL-EGVERLLLRTSSHGKA-- 117

Query: 188 FKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDL-LPSHYEFLEGREVILVE 246
              EF         D A +L +   I+L+G+D  S    DD  L +H++  +   + ++E
Sbjct: 118 --NEFPDIIPHLRADIAPFLSEKG-IRLIGVDVPSVDPLDDKELAAHHQLFK-HSIHILE 173

Query: 247 GLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
            + LD V  G Y +  L L L  A+GSP+R ++
Sbjct: 174 NVVLDHVADGDYELIALPLALSDADGSPVRAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus anthracis (taxid: 1392)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A7GPY2|KYNB_BACCN Kynurenine formamidase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=kynB PE=3 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 13/183 (7%)

Query: 98  KNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKN 157
           ++GS+ N  ++ +  HTGTH+DAP H FD   + G  V  LD+ V  GPA ++DV    +
Sbjct: 36  QSGSV-NIGKVTMSIHTGTHIDAPFH-FD---NDGKKVIDLDIHVYVGPARIIDVSSMDS 90

Query: 158 ITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVG 217
           I  + ++  N+  GV R++ RT +      F        + F+       +    ++L+G
Sbjct: 91  IGVKELQQFNL-EGVERLLLRTSSHGNAQKF-----PDIIPFLCAEIAPFLSKKGVRLIG 144

Query: 218 IDYLSAAAHDDL-LPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIR 276
           +D  S    DD  L +H++  +   + ++E + LD V  G Y +  L L L  A+GSP+R
Sbjct: 145 VDVPSVDPLDDKELAAHHQLFQ-HGIHILENVVLDHVQDGDYELIALPLALTEADGSPVR 203

Query: 277 CIL 279
            I+
Sbjct: 204 AII 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus subsp. cytotoxis (strain NVH 391-98) (taxid: 315749)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A0REX1|KYNB_BACAH Kynurenine formamidase OS=Bacillus thuringiensis (strain Al Hakam) GN=kynB PE=3 SV=1

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 13/183 (7%)

Query: 98  KNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKN 157
           ++GS+ N  ++ +  HTGTH+DAP H FD   + G  V  LD+ V  GPA ++DV   ++
Sbjct: 36  ESGSV-NVGKLTMSIHTGTHIDAPFH-FD---NEGKKVIDLDVQVYVGPARIIDVSNLES 90

Query: 158 ITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVG 217
           I  + +E  ++  GV R++ RT +  +      EF         D A +L +   I+L+G
Sbjct: 91  IGKKELEKFHL-EGVERLLLRTSSHGKA----NEFPDIIPHLRADIAPFLSEKG-IRLIG 144

Query: 218 IDYLSAAAHDDL-LPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIR 276
           +D  S    DD  L +H++  +   + ++E + LD V  G Y +  L L L  A+GSP+R
Sbjct: 145 VDVPSVDPLDDKELAAHHQLFK-HGIHILENVVLDHVADGDYELIALPLALSDADGSPVR 203

Query: 277 CIL 279
            ++
Sbjct: 204 AVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus thuringiensis (strain Al Hakam) (taxid: 412694)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q2N5X0|KYNB_ERYLH Kynurenine formamidase OS=Erythrobacter litoralis (strain HTCC2594) GN=kynB PE=3 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 19/217 (8%)

Query: 66  QIYDITHRITSDMPSFGSKEGLG-QYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHV 124
           +I+DI+  +   +P +      G +  W    +  GS  N   M + +H+GTH DAP H 
Sbjct: 9   RIWDISQTLRPGLPIWPGDTEFGFERTW---RMDEGSPVNVGRMTMSTHSGTHGDAPLH- 64

Query: 125 FDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIP--RGVRRVIFRTLNT 182
              Y + G D  +++L    G  L+VD    + ++ E+ +  ++P      RV+FR  ++
Sbjct: 65  ---YAEDGLDAASMELDSYIGECLVVDA---RGVSGEI-DVADLPHIESADRVLFRQWDS 117

Query: 183 DRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREV 242
                   E+ S ++    +   WL     +KL+G D  S    +    S ++ +   ++
Sbjct: 118 ----FPHDEWRSDWLPIAAETVEWLALQG-VKLIGTDAPSVDPQESKTMSAHKAVLKHDM 172

Query: 243 ILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
            ++EGL LD VP G Y +  L L+++  +    R IL
Sbjct: 173 RILEGLVLDDVPEGRYELLALPLKIVDGDAGLCRAIL 209

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Erythrobacter litoralis (strain HTCC2594) (taxid: 314225)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
449438375	272	PREDICTED: kynurenine formamidase-like [	0.886	0.915	0.792	1e-113
255555311	274	conserved hypothetical protein [Ricinus	0.879	0.901	0.765	1e-111
224060540	268	predicted protein [Populus trichocarpa]	0.903	0.947	0.740	1e-108
18418598	272	Cyclase family protein [Arabidopsis thal	0.896	0.926	0.728	1e-107
297802428	272	cyclase family protein [Arabidopsis lyra	0.889	0.919	0.738	1e-107
147838051	246	hypothetical protein VITISV_019335 [Viti	0.850	0.971	0.75	1e-104
388504058	254	unknown [Medicago truncatula]	0.804	0.889	0.783	1e-104
147838052	271	hypothetical protein VITISV_019336 [Viti	0.911	0.944	0.680	1e-102
255555313	260	conserved hypothetical protein [Ricinus	0.818	0.884	0.743	1e-102
356575656	255	PREDICTED: kynurenine formamidase-like [	0.807	0.890	0.766	1e-101

>gi|449438375|ref|XP_004136964.1| PREDICTED: kynurenine formamidase-like [Cucumis sativus]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/251 (79%), Positives = 226/251 (90%), Gaps = 2/251 (0%)

Query: 32  TAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYL 91
           T AYP++  T PT CSLS+ ++ TP+RREVY+NG+I DI+HR T+DMP++ S +GLGQ+L
Sbjct: 23  TTAYPSVVDTGPTDCSLSDGDL-TPIRREVYDNGRIIDISHRFTTDMPAWESDQGLGQFL 81

Query: 92  WLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVD 151
           WLPKS+KNGSLANNSEMKLP+HTGTHVDAPGHVFDHYFDAG+DVDTLDL VLNGP LLVD
Sbjct: 82  WLPKSMKNGSLANNSEMKLPAHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGPGLLVD 141

Query: 152 VPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNT 211
           VPRDKNITAEVM+SLNIP+GVRRV+FRTLNTDR LM+K+EFD+SYVGFMKDGA+WLV+NT
Sbjct: 142 VPRDKNITAEVMKSLNIPKGVRRVLFRTLNTDRGLMWKKEFDTSYVGFMKDGAKWLVENT 201

Query: 212 DIKLVG-IDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGA 270
           DIKLV  IDYLS AA  DL+PSH EFL GRE ILVEGLKLDGV  GLY+IHCL LRLLGA
Sbjct: 202 DIKLVVLIDYLSVAAFKDLIPSHLEFLRGRETILVEGLKLDGVQPGLYSIHCLPLRLLGA 261

Query: 271 EGSPIRCILIK 281
           EGSPIRCILIK
Sbjct: 262 EGSPIRCILIK 272

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555311|ref|XP_002518692.1| conserved hypothetical protein [Ricinus communis] gi|223542073|gb|EEF43617.1| conserved hypothetical protein [Ricinus communis]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/247 (76%), Positives = 223/247 (90%)

Query: 35  YPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLP 94
           YPTIPG + T  + ++ +  TP+RREVY +G+I DI+H+ T++MPS+GS EGLGQ+LWLP
Sbjct: 28  YPTIPGAVDTTFTATQHDNLTPIRREVYGDGKILDISHKYTTNMPSWGSDEGLGQFLWLP 87

Query: 95  KSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPR 154
            S+KNGSLANNSEMKLP+HTGTHVDAPGHVFDHYFDAG+DVDTLDL VLNG ALLVDVPR
Sbjct: 88  ASMKNGSLANNSEMKLPTHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGHALLVDVPR 147

Query: 155 DKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIK 214
           D NITAEVM+SL+IP+GVRRV+FRTLNTDR+LMFKR+FD+SYVGF KDGA+WLV+NTDIK
Sbjct: 148 DSNITAEVMKSLHIPKGVRRVLFRTLNTDRQLMFKRQFDTSYVGFTKDGAKWLVENTDIK 207

Query: 215 LVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSP 274
           +VGIDYLS AA+ DL+PSH  FLEGRE+ILVEGLKLD + AG+Y++HCL LRLLGAEGSP
Sbjct: 208 MVGIDYLSVAAYSDLIPSHLVFLEGREIILVEGLKLDNIQAGIYSVHCLPLRLLGAEGSP 267

Query: 275 IRCILIK 281
           IRCILIK
Sbjct: 268 IRCILIK 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060540|ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|222847490|gb|EEE85037.1| predicted protein [Populus trichocarpa]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/254 (74%), Positives = 219/254 (86%)

Query: 28  TAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGL 87
           T A TAAYPTIPGT+ T  S S+ +   P+R E+Y NG+I+DI+HR  +DMP + SK+GL
Sbjct: 15  TTASTAAYPTIPGTIDTSVSSSQPDNLIPIRNEIYGNGKIFDISHRYINDMPVWDSKDGL 74

Query: 88  GQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPA 147
           G++L LP S+KNGSLANNSEMKLP+HTGTHVD+PGHVFDHYFD+G+DVDTLDL VLNGPA
Sbjct: 75  GKFLSLPASMKNGSLANNSEMKLPTHTGTHVDSPGHVFDHYFDSGFDVDTLDLEVLNGPA 134

Query: 148 LLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWL 207
           LLVDVPR  NITAEVM+SL+IP+GVRRV+FRTLNTDR+LMFKREFD SYVGF KDGA+WL
Sbjct: 135 LLVDVPRHSNITAEVMKSLHIPKGVRRVLFRTLNTDRRLMFKREFDRSYVGFTKDGAKWL 194

Query: 208 VQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRL 267
           V NTDIKLVGIDYLS AA  DL+PSH  FLEGRE+ILVE LKLD +  G+Y++HCL LRL
Sbjct: 195 VDNTDIKLVGIDYLSVAAWSDLIPSHLVFLEGREIILVEALKLDDIQPGVYSVHCLPLRL 254

Query: 268 LGAEGSPIRCILIK 281
            GAEGSPIRC+LIK
Sbjct: 255 FGAEGSPIRCVLIK 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18418598|ref|NP_567979.1| Cyclase family protein [Arabidopsis thaliana] gi|13937204|gb|AAK50095.1|AF372956_1 AT4g35220/F23E12_220 [Arabidopsis thaliana] gi|18491127|gb|AAL69532.1| AT4g35220/F23E12_220 [Arabidopsis thaliana] gi|21537400|gb|AAM61741.1| unknown [Arabidopsis thaliana] gi|332661081|gb|AEE86481.1| Cyclase family protein [Arabidopsis thaliana]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/254 (72%), Positives = 222/254 (87%), Gaps = 2/254 (0%)

Query: 27  LTAAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEG 86
           ++A  + AYP+IPGT P     ++E    P+RREVY NG+IYDI+HR T +MPS+ S EG
Sbjct: 20  ISAGASNAYPSIPGTAPIDGGFTDEL--KPIRREVYGNGKIYDISHRYTPEMPSWDSSEG 77

Query: 87  LGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGP 146
           +G++LWL  S+KNGSLANNSEMK+P+HTGTHVD+PGHV+D Y+DAG+DVD+LDL VLNG 
Sbjct: 78  IGRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDKYYDAGFDVDSLDLQVLNGL 137

Query: 147 ALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARW 206
           ALLVDVP+DKNITAEVM+SL+IP+GV RV+FRTLNTDR+LMFK+EFD+SYVGFMKDGA+W
Sbjct: 138 ALLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMFKKEFDTSYVGFMKDGAQW 197

Query: 207 LVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLR 266
           LV NTDIKLVGIDYLS AA+DDL+PSH  FL+ RE ILVEGLKLDGV AGLY++HCL LR
Sbjct: 198 LVDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGLKLDGVKAGLYSVHCLPLR 257

Query: 267 LLGAEGSPIRCILI 280
           L+GAEGSPIRCILI
Sbjct: 258 LVGAEGSPIRCILI 271

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802428|ref|XP_002869098.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314934|gb|EFH45357.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/252 (73%), Positives = 222/252 (88%), Gaps = 2/252 (0%)

Query: 29  AAETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLG 88
           A+ + AYP+IPGT P     ++E    P+RREVY +G+IYDI+HR T DMPS+ S EGLG
Sbjct: 22  ASASDAYPSIPGTAPIDGGFTDEL--KPIRREVYGHGKIYDISHRYTPDMPSWDSSEGLG 79

Query: 89  QYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPAL 148
           ++LWL  S+KNGSLANNSEMK+P+HTGTHVD+PGHV+D+Y+DAG+DVD+LDL VLNG AL
Sbjct: 80  RFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDNYYDAGFDVDSLDLQVLNGLAL 139

Query: 149 LVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLV 208
           LVDVP+DKNITAEVM+SL+IP+GV RV+FRTLNTDR+LMFK+EFD+SYVGFMKDGA+WLV
Sbjct: 140 LVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMFKKEFDTSYVGFMKDGAQWLV 199

Query: 209 QNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLL 268
            NTDIKLVGIDYLS AA+DDL+PSH  FL+ RE ILVEGLKLDGV AGLY++HCL LRL+
Sbjct: 200 DNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGLKLDGVKAGLYSVHCLPLRLV 259

Query: 269 GAEGSPIRCILI 280
           GAEGSPIRCILI
Sbjct: 260 GAEGSPIRCILI 271

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838051|emb|CAN60920.1| hypothetical protein VITISV_019335 [Vitis vinifera]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/240 (75%), Positives = 213/240 (88%), Gaps = 1/240 (0%)

Query: 43  PTGCSLSEEEVPT-PVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGS 101
           P+G   +  +V   PVR+EVY+ G+I+DI+HR T DMPSF S EG+GQ+LWLPKS+KNGS
Sbjct: 6   PSGYDTASCDVDLLPVRQEVYDGGRIFDISHRYTPDMPSFDSDEGIGQFLWLPKSMKNGS 65

Query: 102 LANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAE 161
           +ANNSEMK+ +HTGTHVDAPGHVFDHYFDAG+DVDTLDL VLNGPALLVDVPR+KNITAE
Sbjct: 66  IANNSEMKMQTHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGPALLVDVPRNKNITAE 125

Query: 162 VMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYL 221
           VMESLNIP+GVRRV+FRTLNTDR+LMF ++FD+SYVGF +DGA+WLV+NT+IKLVGIDYL
Sbjct: 126 VMESLNIPKGVRRVLFRTLNTDRRLMFTKKFDTSYVGFTQDGAKWLVENTNIKLVGIDYL 185

Query: 222 SAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
           S AA+ DLL +HY FL+GRE ILVEGLKLD +  G+Y++HCL LRL GAEGSPIRCILIK
Sbjct: 186 SVAAYSDLLSAHYAFLKGRETILVEGLKLDDIKPGIYSVHCLPLRLFGAEGSPIRCILIK 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504058|gb|AFK40095.1| unknown [Medicago truncatula]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 177/226 (78%), Positives = 205/226 (90%)

Query: 56  PVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTG 115
           P RREVY+NG+I+DITHR   DMP+F + +G+GQ+LWLPKS+KNGS+ANNSEMKLP+HTG
Sbjct: 28  PPRREVYDNGKIFDITHRYQPDMPAFETNDGIGQFLWLPKSMKNGSIANNSEMKLPTHTG 87

Query: 116 THVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRV 175
           THVDAPGHVFDHYFDAG+DVD+LDL VLNGPALLVDVPRD NITAEVM+SLNIPRGV+RV
Sbjct: 88  THVDAPGHVFDHYFDAGFDVDSLDLHVLNGPALLVDVPRDSNITAEVMKSLNIPRGVKRV 147

Query: 176 IFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYE 235
           +FRTLNTDR+LMF++EFDSSYVGF  DGA+WLV+NTDIKLVGIDYLS A++D L+PSH  
Sbjct: 148 LFRTLNTDRRLMFQKEFDSSYVGFTVDGAKWLVENTDIKLVGIDYLSVASYDYLIPSHLV 207

Query: 236 FLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
           FL+ RE ILVE LKLD +P GLY++HCL LRL GAEGSPIRCILIK
Sbjct: 208 FLKDRESILVESLKLDDIPPGLYSVHCLPLRLAGAEGSPIRCILIK 253

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838052|emb|CAN60921.1| hypothetical protein VITISV_019336 [Vitis vinifera]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/263 (68%), Positives = 217/263 (82%), Gaps = 7/263 (2%)

Query: 20  LTLAILTLTAA-ETAAYPTIPGTMPTGCSLSEEEVPTPVRREVYENGQIYDITHRITSDM 78
           +T+A L L ++  + AYP+  G+      L       PV+REVY +G+I+DITH  T +M
Sbjct: 15  VTVATLFLPSSFASEAYPSAYGSGSCNVEL------IPVKREVYADGRIFDITHPYTPNM 68

Query: 79  PSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTL 138
           P+FG+ EG+G+ +WL KS+KNGS+ NNS MK+P+HTGTHVD+PGHVFDHYFDAG+DV+TL
Sbjct: 69  PTFGTDEGIGEVIWLEKSMKNGSITNNSHMKMPTHTGTHVDSPGHVFDHYFDAGFDVETL 128

Query: 139 DLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVG 198
           DL VLNGPALLVD PRDKNITAE MESL IP+GVRRV+FRTLNTDRKLMFK+EF+S Y G
Sbjct: 129 DLEVLNGPALLVDAPRDKNITAEAMESLQIPKGVRRVLFRTLNTDRKLMFKKEFESDYAG 188

Query: 199 FMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLY 258
           F +DGARWLV+NTDIKLVGIDY+S A +D ++ +H  FLEGREVILVE LKLD VPAG+Y
Sbjct: 189 FTEDGARWLVENTDIKLVGIDYVSVATYDHIVSAHLPFLEGREVILVESLKLDDVPAGMY 248

Query: 259 NIHCLHLRLLGAEGSPIRCILIK 281
           N+HCLHLRL GAEG+PIRCILIK
Sbjct: 249 NVHCLHLRLPGAEGAPIRCILIK 271

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555313|ref|XP_002518693.1| conserved hypothetical protein [Ricinus communis] gi|223542074|gb|EEF43618.1| conserved hypothetical protein [Ricinus communis]

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/230 (74%), Positives = 204/230 (88%)

Query: 52  EVPTPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLP 111
           EVP PVRREVY+NG+I+D+THR+   MPS+ SKEGLG+++WL  S+KNGSL N+SEMKL 
Sbjct: 31  EVPVPVRREVYDNGKIFDVTHRVNPKMPSWDSKEGLGEFIWLVSSMKNGSLVNSSEMKLS 90

Query: 112 SHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRG 171
           +HTGTH+DAP HV+D Y+DAG+D+DTLDL VLNGPAL+VDVPRD NITAEVM+SL IP+G
Sbjct: 91  THTGTHIDAPSHVYDEYYDAGFDIDTLDLEVLNGPALVVDVPRDSNITAEVMKSLKIPKG 150

Query: 172 VRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLP 231
           +RRV+FRTLNTDRKLMFK+EFDSSYVGFM DGA+WLV+NTDIKLVG+DYLS A++ DLLP
Sbjct: 151 IRRVLFRTLNTDRKLMFKKEFDSSYVGFMSDGAKWLVENTDIKLVGLDYLSVASYVDLLP 210

Query: 232 SHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
           +H  FL+ REVILVEGLKLD +  GLYN+HCL LRLL A+GSP RCILIK
Sbjct: 211 THLAFLKNREVILVEGLKLDDIQPGLYNVHCLPLRLLRADGSPARCILIK 260

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575656|ref|XP_003555954.1| PREDICTED: kynurenine formamidase-like [Glycine max]

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/227 (76%), Positives = 203/227 (89%)

Query: 55  TPVRREVYENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHT 114
            P RREVY NG+I+DI+HR   +MP + S +G+GQ+LWLPKS+KNGSLANNSEMK P+HT
Sbjct: 28  VPPRREVYGNGRIFDISHRYQPEMPEWESNDGIGQFLWLPKSMKNGSLANNSEMKFPTHT 87

Query: 115 GTHVDAPGHVFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRR 174
           GTHVDAPGHVFDHYF AG+DVDTLDL +LNGPA+LVDVPRD NITA+VM+SLNIPRGV R
Sbjct: 88  GTHVDAPGHVFDHYFHAGFDVDTLDLDILNGPAMLVDVPRDSNITAQVMKSLNIPRGVIR 147

Query: 175 VIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHY 234
           V+FRTLNTDR+LMF++E+DSSYVGF  DGA+WLV+NTDIKLVGIDYLS A++D L+PSH 
Sbjct: 148 VLFRTLNTDRRLMFQKEWDSSYVGFTADGAKWLVENTDIKLVGIDYLSVASYDYLIPSHL 207

Query: 235 EFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
            FL+ RE+ILVEGLKLD VPAGLY++HCL LRL GAEGSPIRCILIK
Sbjct: 208 VFLKDREIILVEGLKLDDVPAGLYSVHCLPLRLAGAEGSPIRCILIK 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
TAIR|locus:2122053	272	AT4G35220 "AT4G35220" [Arabido	0.772	0.797	0.778	3.9e-92
TAIR|locus:2124231	255	AT4G34180 "AT4G34180" [Arabido	0.772	0.850	0.683	2.3e-78
TAIR|locus:2823650	271	AT1G44542 "AT1G44542" [Arabido	0.768	0.797	0.666	5.5e-77
UNIPROTKB|Q3Z8N2	208	DET0641 "Cyclase, putative" [D	0.729	0.985	0.342	3.4e-22
TIGR_CMR|DET_0641	208	DET_0641 "cyclase, putative" [	0.729	0.985	0.342	3.4e-22
TIGR_CMR|DET_0675	208	DET_0675 "cyclase, putative" [	0.729	0.985	0.342	3.4e-22
UNIPROTKB|Q747B8	227	GSU3349 "Cyclase/hydrolase, pu	0.715	0.885	0.328	2.4e-21
TIGR_CMR|GSU_3349	227	GSU_3349 "cyclase, putative" [	0.715	0.885	0.328	2.4e-21
UNIPROTKB|Q736W4	209	kynB "Kynurenine formamidase"	0.701	0.942	0.314	1.2e-17
UNIPROTKB|A9VHP8	209	kynB "Kynurenine formamidase"	0.711	0.956	0.305	5.3e-17

TAIR|locus:2122053 AT4G35220 "AT4G35220" [Arabidopsis thaliana (taxid:3702)]

 Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
 Identities = 169/217 (77%), Positives = 199/217 (91%)

Query:    64 NGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGH 123
             NG+IYDI+HR T +MPS+ S EG+G++LWL  S+KNGSLANNSEMK+P+HTGTHVD+PGH
Sbjct:    55 NGKIYDISHRYTPEMPSWDSSEGIGRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGH 114

Query:   124 VFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTD 183
             V+D Y+DAG+DVD+LDL VLNG ALLVDVP+DKNITAEVM+SL+IP+GV RV+FRTLNTD
Sbjct:   115 VYDKYYDAGFDVDSLDLQVLNGLALLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTD 174

Query:   184 RKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVI 243
             R+LMFK+EFD+SYVGFMKDGA+WLV NTDIKLVGIDYLS AA+DDL+PSH  FL+ RE I
Sbjct:   175 RRLMFKKEFDTSYVGFMKDGAQWLVDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETI 234

Query:   244 LVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILI 280
             LVEGLKLDGV AGLY++HCL LRL+GAEGSPIRCILI
Sbjct:   235 LVEGLKLDGVKAGLYSVHCLPLRLVGAEGSPIRCILI 271

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2124231 AT4G34180 "AT4G34180" [Arabidopsis thaliana (taxid:3702)]

 Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
 Identities = 149/218 (68%), Positives = 184/218 (84%)

Query:    65 GQIYDITHRITSDMPSFGSKEGLGQ-YLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGH 123
             G+IYDI+HR T ++P++ S EGLG+ +L L  S+KNGS AN SEMKL  H+GTHVDAPGH
Sbjct:    38 GKIYDISHRYTPEIPAWESSEGLGKTFLRLAASMKNGSFANVSEMKLSVHSGTHVDAPGH 97

Query:   124 VFDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTD 183
              +D+Y+DAG+D D+LDL VLNGPALLVDVPRDKNITAEVMESL+I RGVRRV+FRT NTD
Sbjct:    98 FWDNYYDAGFDTDSLDLQVLNGPALLVDVPRDKNITAEVMESLHIQRGVRRVLFRTSNTD 157

Query:   184 RKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVI 243
             ++LMFK+EFDSS+ GFM DGA+WLV+NTDIKL+G+DYLS AA ++   +H   L+GR++I
Sbjct:   158 KRLMFKKEFDSSFAGFMTDGAKWLVENTDIKLIGLDYLSFAAFEESPATHRVILKGRDII 217

Query:   244 LVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
              VE LKLDGV  G Y++HCL LRL+GAEG+P RCILIK
Sbjct:   218 PVEALKLDGVEVGTYSLHCLPLRLVGAEGAPTRCILIK 255

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005618 "cell wall" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006096 "glycolysis" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2823650 AT1G44542 "AT1G44542" [Arabidopsis thaliana (taxid:3702)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 144/216 (66%), Positives = 182/216 (84%)

Query:    66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
             +IYDI+H+ T ++P + S EGLG +L L  S+KNGS AN S+M+L  H+GTHVDAPGH  
Sbjct:    56 KIYDISHQYTPELPVWESSEGLGNFLRLAVSMKNGSDANISKMELSVHSGTHVDAPGHFH 115

Query:   126 DHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
             DHY+++G+D D+LDL +LNGPALLVDVPRDKNI+AEVM+SL+IPRG+RRV+F+TLNTDR+
Sbjct:   116 DHYYESGFDTDSLDLQILNGPALLVDVPRDKNISAEVMKSLHIPRGIRRVLFKTLNTDRR 175

Query:   186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILV 245
             LMFK+EFDSS+VGFM DGA+WLV+NTDIKLVG+DYLS AA+D+   +H   LE R++I V
Sbjct:   176 LMFKKEFDSSFVGFMVDGAKWLVENTDIKLVGLDYLSFAAYDEAPATHRFILERRDIIPV 235

Query:   246 EGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
             E LKLD V  G+Y +HCL LRL+GAEG+P RCILIK
Sbjct:   236 EALKLDDVEVGMYTLHCLPLRLVGAEGAPTRCILIK 271

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q3Z8N2 DET0641 "Cyclase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 74/216 (34%), Positives = 115/216 (53%)

Query:    66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
             +IYD++  I  +M S+   +G  Q + L  SI+ G   N  ++ +  H G+H+DAP H  
Sbjct:     3 KIYDLSPEIRPEMISWPG-DGPPQ-IKLLHSIRGGFPTNLGQLTMTLHNGSHIDAPLH-- 58

Query:   126 DHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
               +F+ G  V  + L +L G   ++     K IT +++E   + RGV R+I  T N    
Sbjct:    59 --FFEDGDGVGEIPLEILIGNVRVLCFSGVKTITRDMLEQAEL-RGVTRLILATDN--ET 113

Query:   186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILV 245
             L  K +FD +Y       AR+L +   I+L+GIDYLS    ++    H   L  R V+++
Sbjct:   114 LWDKPDFDRNYTYIDIGAARYLTE-IGIRLLGIDYLSVEDFEETQGVHKHLLS-RGVVIL 171

Query:   246 EGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
             E L+L GV  G Y + CL L+L   +G+P R ILI+
Sbjct:   172 ESLQLAGVAEGDYELFCLPLKLGKVDGAPARVILIE 207

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_0641 DET_0641 "cyclase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 74/216 (34%), Positives = 115/216 (53%)

Query:    66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
             +IYD++  I  +M S+   +G  Q + L  SI+ G   N  ++ +  H G+H+DAP H  
Sbjct:     3 KIYDLSPEIRPEMISWPG-DGPPQ-IKLLHSIRGGFPTNLGQLTMTLHNGSHIDAPLH-- 58

Query:   126 DHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
               +F+ G  V  + L +L G   ++     K IT +++E   + RGV R+I  T N    
Sbjct:    59 --FFEDGDGVGEIPLEILIGNVRVLCFSGVKTITRDMLEQAEL-RGVTRLILATDN--ET 113

Query:   186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILV 245
             L  K +FD +Y       AR+L +   I+L+GIDYLS    ++    H   L  R V+++
Sbjct:   114 LWDKPDFDRNYTYIDIGAARYLTE-IGIRLLGIDYLSVEDFEETQGVHKHLLS-RGVVIL 171

Query:   246 EGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
             E L+L GV  G Y + CL L+L   +G+P R ILI+
Sbjct:   172 ESLQLAGVAEGDYELFCLPLKLGKVDGAPARVILIE 207

GO:0008150 "biological_process" evidence=ND

GO:0009975 "cyclase activity" evidence=ISS

TIGR_CMR|DET_0675 DET_0675 "cyclase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 74/216 (34%), Positives = 115/216 (53%)

Query:    66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
             +IYD++  I  +M S+   +G  Q + L  SI+ G   N  ++ +  H G+H+DAP H  
Sbjct:     3 KIYDLSPEIRPEMISWPG-DGPPQ-IKLLHSIRGGFPTNLGQLTMTLHNGSHIDAPLH-- 58

Query:   126 DHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
               +F+ G  V  + L +L G   ++     K IT +++E   + RGV R+I  T N    
Sbjct:    59 --FFEDGDGVGEIPLEILIGNVRVLCFSGVKTITRDMLEQAEL-RGVTRLILATDN--ET 113

Query:   186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILV 245
             L  K +FD +Y       AR+L +   I+L+GIDYLS    ++    H   L  R V+++
Sbjct:   114 LWDKPDFDRNYTYIDIGAARYLTE-IGIRLLGIDYLSVEDFEETQGVHKHLLS-RGVVIL 171

Query:   246 EGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK 281
             E L+L GV  G Y + CL L+L   +G+P R ILI+
Sbjct:   172 ESLQLAGVAEGDYELFCLPLKLGKVDGAPARVILIE 207

GO:0008150 "biological_process" evidence=ND

GO:0009975 "cyclase activity" evidence=ISS

UNIPROTKB|Q747B8 GSU3349 "Cyclase/hydrolase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 71/216 (32%), Positives = 111/216 (51%)

Query:    66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKS-IKNGSLANNSEMKLPSHTGTHVDAPGHV 124
             +I DIT  ++ D+P +    G   +   P + +  G  AN S + L +H GTH+D P H+
Sbjct:     2 KIIDITVSLSPDLPVY---PGDPPFSLEPVARVARGDGANVSRITLGTHAGTHIDVPRHL 58

Query:   125 FDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIP-RGVRRVIFRTLNTD 183
              D     G  VD + L +L G A ++++  D  I     E  ++P +G  R+I +T N+ 
Sbjct:    59 RDD----GASVDQVPLDLLTGKARVIEL-HDV-IAIGRRELAHLPVKGEERIILKTANS- 111

Query:   184 RKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVI 243
              +L     F  SY     DGAR+L +    +LVGIDYLS     +    H   L+   ++
Sbjct:   112 -RLWSHAGFLDSYASLTPDGARYLAE-VGTRLVGIDYLSIGPFGNEAEVHQILLDAG-IL 168

Query:   244 LVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
             ++EGL L  V  G Y + CL L++ G +G+P R +L
Sbjct:   169 ILEGLNLADVEPGHYELLCLPLKIAGGDGAPARALL 204

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_3349 GSU_3349 "cyclase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 71/216 (32%), Positives = 111/216 (51%)

Query:    66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKS-IKNGSLANNSEMKLPSHTGTHVDAPGHV 124
             +I DIT  ++ D+P +    G   +   P + +  G  AN S + L +H GTH+D P H+
Sbjct:     2 KIIDITVSLSPDLPVY---PGDPPFSLEPVARVARGDGANVSRITLGTHAGTHIDVPRHL 58

Query:   125 FDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIP-RGVRRVIFRTLNTD 183
              D     G  VD + L +L G A ++++  D  I     E  ++P +G  R+I +T N+ 
Sbjct:    59 RDD----GASVDQVPLDLLTGKARVIEL-HDV-IAIGRRELAHLPVKGEERIILKTANS- 111

Query:   184 RKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVI 243
              +L     F  SY     DGAR+L +    +LVGIDYLS     +    H   L+   ++
Sbjct:   112 -RLWSHAGFLDSYASLTPDGARYLAE-VGTRLVGIDYLSIGPFGNEAEVHQILLDAG-IL 168

Query:   244 LVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
             ++EGL L  V  G Y + CL L++ G +G+P R +L
Sbjct:   169 ILEGLNLADVEPGHYELLCLPLKIAGGDGAPARALL 204

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q736W4 kynB "Kynurenine formamidase" [Bacillus cereus ATCC 10987 (taxid:222523)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 67/213 (31%), Positives = 114/213 (53%)

Query:    69 DITHRITSDMPSF-GSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDH 127
             DI+  + +D+ ++ G      +  W PK  ++GS+ N  ++ +  HTGTH+DAP H FD+
Sbjct:     8 DISQPLNNDIATWPGDTPFSYEVSW-PKE-ESGSV-NVGKLTMSIHTGTHIDAPFH-FDN 63

Query:   128 YFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLM 187
                 G  V  LD+ V  GP  ++DV   ++I  + +E+ N+  GV R++ RT ++  K+ 
Sbjct:    64 ---EGKKVIDLDIQVYVGPVRIIDVSNLESIGKKELENFNL-EGVERLLLRT-SSHGKV- 117

Query:   188 FKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDL-LPSHYEFLEGREVILVE 246
                EF         D A +L +   I+L+G+D  S    DD  L +H++  +   + ++E
Sbjct:   118 --NEFPDVIPHLHADIAPFLSEK-GIRLIGVDVPSVDPLDDKELEAHHQLFK-HGIHILE 173

Query:   247 GLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
              + LD V  G Y +  L L L  A+GSP+R ++
Sbjct:   174 NVVLDHVADGDYELIALPLALTDADGSPVRAVI 206

GO:0004061 "arylformamidase activity" evidence=ISS

GO:0019441 "tryptophan catabolic process to kynurenine" evidence=ISS

GO:0043420 "anthranilate metabolic process" evidence=ISS

UNIPROTKB|A9VHP8 kynB "Kynurenine formamidase" [Bacillus weihenstephanensis KBAB4 (taxid:315730)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 66/216 (30%), Positives = 111/216 (51%)

Query:    66 QIYDITHRITSDMPSF-GSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHV 124
             Q  DI+  + +D+ ++ G      +  W   S +N    N  ++ +  HTGTH+DAP H 
Sbjct:     5 QWIDISQPLNNDIATWPGDTPFSYEVSW---SKENSGSVNVGKLTMSIHTGTHIDAPFH- 60

Query:   125 FDHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDR 184
             FD+  D G  V  LD+ V  GPA ++DV   ++I  + +E+ ++  GV R++ RT +  +
Sbjct:    61 FDN--D-GKKVLDLDIQVYVGPARIIDVSNLESIGKKELENFHL-EGVERLLLRTSSHGK 116

Query:   185 KLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDL-LPSHYEFLEGREVI 243
                   EF         D A +L +   I+L+G+D  S    DD  L +H++  +   + 
Sbjct:   117 A----NEFPDVIPHLRADIAAFLSEK-GIRLIGVDVPSVDPLDDKELAAHHQLFK-HGIH 170

Query:   244 LVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
             ++E + LD V  G Y +  L L L  A+GSP+R ++
Sbjct:   171 ILENVVLDHVVDGDYELIALPLALTDADGSPVRAVI 206

GO:0004061 "arylformamidase activity" evidence=ISS

GO:0019441 "tryptophan catabolic process to kynurenine" evidence=ISS

GO:0043420 "anthranilate metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.1.9	0.737
3rd Layer	3.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT4G35220 cyclase family protein; cyclase family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Putative cyclase (InterPro-IPR007325); BEST Arabidopsis thaliana protein match is- cyclase family protein (TAIR-AT4G34180.1); Has 778 Blast hits to 778 proteins in 304 species- Archae - 55; Bacteria - 578; Metazoa - 30; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 66 (source- NCBI BLink). (272 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	281
COG1878	218	COG1878, COG1878, Kynurenine formamidase [Amino ac	2e-29
pfam04199	162	pfam04199, Cyclase, Putative cyclase	5e-27
TIGR03035	206	TIGR03035, trp_arylform, arylformamidase	2e-14

>gnl|CDD|224790 COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]

 Score =  110 bits (277), Expect = 2e-29
 Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 64  NGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGH 123
             ++ D++H +   MP++     +        +       N S + L  HTGTH+DAP H
Sbjct: 3   MMKVIDLSHPLEPGMPTWPGDPPVEI---ERIATLAKDGFNVSIITLGEHTGTHIDAPLH 59

Query: 124 VFDHYFDA-GYDVDTLDLGVLNGPALLVDVPR---DKNITAEVMESLNIPRGVRRVIFRT 179
                F   G  +D + L    GP +++D+     D+ IT + +E+ +       V+ RT
Sbjct: 60  -----FIEGGLSIDEIPLESFIGPGVVIDISGKDPDEVITEDDIEAWDAEHPGDIVLIRT 114

Query: 180 LNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS-AAAHDDLLPSHYEFLE 238
               ++   +  F   + G   + A +L++   +K VGID  S      +  P+H   L 
Sbjct: 115 -GWSKRWGDEPAFQYHFPGISIEAAEYLIER-GVKAVGIDTPSTDPGLSEDFPAHRLLL- 171

Query: 239 GREVILVEGL-KLDGVPAGLYN-IHCLHLRLLGAEGSPIRCILIK 281
              +++VE L  LD +PAG       L L++ G +GSP+R + + 
Sbjct: 172 SAGILIVENLTNLDKLPAGGAYLFLALPLKIKGGDGSPVRVLALV 216

Length = 218

>gnl|CDD|217960 pfam04199, Cyclase, Putative cyclase

 Score =  102 bits (257), Expect = 5e-27
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 17/165 (10%)

Query: 67  IYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFD 126
           I D++H +   MP +      G+      + ++G   N  ++   +HTGTHVDAPGH   
Sbjct: 1   IIDLSHPLDPGMPVYPGHPTSGE--AGDGTGEDGDGYNTDKITTSTHTGTHVDAPGHFIF 58

Query: 127 HYFDAGYDVDTLDLGVLNGPALLVDVPRDKN----ITAEVME-----SLNIPRGVRRVIF 177
                G  +D L L    GP +L+DV         ITA  +E        I  G   V+ 
Sbjct: 59  G--PDGRTIDELPLEWFVGPGVLLDVAHKLPPGYEITAADLEAALKQGGTIKPGD-IVLI 115

Query: 178 RTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS 222
           RT   D++      + +++ G   + A+WLV    +K VGID  S
Sbjct: 116 RTGW-DKRWGTPEYY-NNHPGLSLEAAQWLV-ERGVKAVGIDTPS 157

Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form part of the active site. Length = 162

>gnl|CDD|132080 TIGR03035, trp_arylform, arylformamidase

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 15/215 (6%)

Query: 67  IYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFD 126
            +DI+  + +  P++       Q      S +     N   + L  HTG H DAP H   
Sbjct: 2   WWDISPPLNNATPTWPGDTPFSQEW--VWSKEETCPVNVGRITLSPHTGAHADAPLH--- 56

Query: 127 HYFDAGYDVDTLDLGVLNGPALLVD-VPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
            Y + G  +  + L V  GP  ++  +   + I  E + S  +     RV+ RT      
Sbjct: 57  -YDNDGAPIGDVPLDVYLGPCRVIHCLGAGELIDPEHLRSA-LLELPPRVLLRTYLP--- 111

Query: 186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSA-AAHDDLLPSHYEFLEGREVIL 244
                 +   +     D    L +   ++L+GID  S        L +H+        IL
Sbjct: 112 -APANAWPDDFPAVAPDTIELLAEK-GVRLIGIDTPSVDPLDSKTLDAHHALFRHGMAIL 169

Query: 245 VEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCIL 279
            E + LD V  G Y +  L L+   A+ SP+R +L
Sbjct: 170 -ENVVLDDVAEGDYELIALPLKFTDADASPVRAVL 203

One of several pathways of tryptophan degradation is as follows: tryptophan 2,3-dioxygenase (1.13.11.11) uses 02 to convert Trp to L-formylkynurenine. Arylformamidase (3.5.1.9) hydrolyzes the product to L-kynurenine and formate. Kynureninase (3.7.1.3) hydrolyzes L-kynurenine to anthranilate plus alanine. Members of the seed alignment for this model are bacterial predicted metal-dependent hydrolases. All are supported as arylformamidase (3.5.1.9) by an operon structure in which kynureninase and/or tryptophan 2,3-dioxygenase genes are adjacent. The members from Bacillus cereus, Pseudomonas aeruginosa and Ralstonia metallidurans were characterized. An example from Pseudomonas fluorescens is given the gene symbol qbsH instead of kynB because of its role in quinolobactin biosynthesis, which begins with tryptophan. All members of this family should be arylformamidase (3.5.1.9) [Energy metabolism, Amino acids and amines]. Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	281
TIGR03035	206	trp_arylform arylformamidase. One of several pathw	100.0
COG1878	218	Kynurenine formamidase [Amino acid transport and m	100.0
PF04199	171	Cyclase: Putative cyclase; InterPro: IPR007325 Pro	100.0

>TIGR03035 trp_arylform arylformamidase

Probab=100.00  E-value=6.8e-57  Score=398.15  Aligned_cols=203  Identities=25%  Similarity=0.393  Sum_probs=180.1

Q ss_pred             EEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCcccccccccceec
Q 023541           66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNG  145 (281)
Q Consensus        66 ~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~l~l~~~~g  145 (281)
                      |+|||||+++++||.||++|+++.  ....+..+++.+|.+.++|++|+|||+|||+||.    ++|++++++|++.|+|
T Consensus         1 ~iiDLS~~i~~~~p~~p~~p~~~~--~~~~~~~~~~~~~~~~i~~~~H~GTHiDAP~Hf~----~~g~~id~~pl~~~~g   74 (206)
T TIGR03035         1 RWWDISPPLNNATPTWPGDTPFSQ--EWVWSKEETCPVNVGRITLSPHTGAHADAPLHYD----NDGAPIGDVPLDVYLG   74 (206)
T ss_pred             CEEEeccCcCCCCCccCCCCCeeE--EEEEEecCCCcEEEEEEEECCccccccccchhhC----CCCCCccccchHHhee
Confidence            689999999999999999987753  2223333444599999999999999999999999    8999999999999999


Q ss_pred             cEEEEE-cCCCccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCCcC
Q 023541          146 PALLVD-VPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAA  224 (281)
Q Consensus       146 ~avvlD-v~~~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~Svd  224 (281)
                      +++||| ++.+..||+|||+++.++.+ |+|||||||..    ..++|..++||+++|+|+||+++ +|++||+|++|+|
T Consensus        75 ~~~vid~~~~~~~it~edl~~~~~~~~-d~vl~~Tg~~~----~~~~y~~~~Pgls~eaa~~L~e~-~i~~iG~D~~s~d  148 (206)
T TIGR03035        75 PCRVIHCLGAGELIDPEHLRSALLELP-PRVLLRTYLPA----PANAWPDDFPAVAPDTIELLAEK-GVRLIGIDTPSVD  148 (206)
T ss_pred             cEEEEEEeCCCCccCHHHHHhhhhcCC-CEEEEECCCCC----CccccCCCCCeeCHHHHHHHHHC-CCeEEEECCCccC
Confidence            999999 44567899999998877666 89999999942    24678889999999999999995 9999999999999


Q ss_pred             CCC-CCcHhHHhhhhCCCeeEEEcccCCCCCCCcEEEEEeccccCCCCccceeeEEEC
Q 023541          225 AHD-DLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       225 ~~~-~~~p~H~~lL~~~gI~iiE~LnLd~L~~~~~~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      ... ..+++|+.||+ +||+++||+||++|++++|.|+|+||||+|+||||||+||++
T Consensus       149 ~~~~~~~~~H~~ll~-~gi~iiE~~~L~~l~~~~~~~~~~PLki~g~~GsPvR~va~~  205 (206)
T TIGR03035       149 PLDSKTLDAHHALFR-HGMAILENVVLDDVAEGDYELIALPLKFTDADASPVRAVLRP  205 (206)
T ss_pred             CCCCCchHHHHHHHh-CCeeEEeccccccCCCCCeEEEEeCcccCCCCccCeEEEEec
Confidence            874 46899999997 799999999999999999999999999999999999999984

One of several pathways of tryptophan degradation is as follows: tryptophan 2,3-dioxygenase (1.13.11.11) uses 02 to convert Trp to L-formylkynurenine. Arylformamidase (3.5.1.9) hydrolyzes the product to L-kynurenine and formate. Kynureninase (3.7.1.3) hydrolyzes L-kynurenine to anthranilate plus alanine. Members of the seed alignment for this model are bacterial predicted metal-dependent hydrolases. All are supported as arylformamidase (3.5.1.9) by an operon structure in which kynureninase and/or tryptophan 2,3-dioxygenase genes are adjacent. The members from Bacillus cereus, Pseudomonas aeruginosa and Ralstonia metallidurans were characterized. An example from Pseudomonas fluorescens is given the gene symbol qbsH instead of kynB because of its role in quinolobactin biosynthesis, which begins with tryptophan. All members of this family should be arylformamidase (3.5.1.9).

>COG1878 Kynurenine formamidase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-55  Score=386.29  Aligned_cols=209  Identities=28%  Similarity=0.450  Sum_probs=184.3

Q ss_pred             CCCEEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCcccccccccc
Q 023541           63 ENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGV  142 (281)
Q Consensus        63 ~~~~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~l~l~~  142 (281)
                      +.+++|||||+++++||+||++|++++  +...++++++ |+.+++++++|+|||+|||.||.    .+|.++|++|++.
T Consensus         2 ~~~~~iDLS~~l~~~~p~~pg~p~~~i--e~~~~~~~~g-~~~~~i~~~~HtGTHiDAP~Hf~----~~G~~id~ipl~~   74 (218)
T COG1878           2 GMMKVIDLSHPLEPGMPTWPGDPPVEI--ERIATLAKDG-FNVSIITLGEHTGTHIDAPLHFI----EGGLSIDEIPLES   74 (218)
T ss_pred             CcceEEEcccccCCCCCCCCCCCCcEE--EEeEEecCCc-EEEEEEEecCccccccccHHhhc----CCCCccccCCHHH
Confidence            578999999999999999999998753  4445555554 99999999999999999999999    8999999999999


Q ss_pred             eeccEEEEEcCC---CccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeec
Q 023541          143 LNGPALLVDVPR---DKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGID  219 (281)
Q Consensus       143 ~~g~avvlDv~~---~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD  219 (281)
                      |+|+++|||++.   +..++.++++++.....+++|+|||||.+++. +..+|..++||++.|+|+||++ ++||+||+|
T Consensus        75 ~ig~~~Vid~~~~~~~~~~~~~~~~a~~~~~~g~~v~i~Tgw~~~~~-~~~~f~~~~Pg~~~eaa~~L~e-~~VkaVGiD  152 (218)
T COG1878          75 FIGPGVVIDISGKDPDEVITEDDIEAWDAEHPGDIVLIRTGWSKRWG-DEPAFQYHFPGISIEAAEYLIE-RGVKAVGID  152 (218)
T ss_pred             hEeeeEEEEecCCCcccccCHHHhhhhcccCCccEEEEEccchhhcC-CcchhhccCcccCHHHHHHHHH-cCCeEEEec
Confidence            999999999994   55799999999865442389999999987643 2345578999999999999999 599999999


Q ss_pred             CCCcCCCC-CCcHhHHhhhhCCCeeEEEcc-cCCCCCCCcE-EEEEeccccCCCCccceeeEEEC
Q 023541          220 YLSAAAHD-DLLPSHYEFLEGREVILVEGL-KLDGVPAGLY-NIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       220 ~~Svd~~~-~~~p~H~~lL~~~gI~iiE~L-nLd~L~~~~~-~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      ++|+|+.. ..+++|+.||+ +|++++||| ||++|+.+.+ .+.++|||++|++|||||++|+.
T Consensus       153 t~s~d~~~~~~~~~H~~lL~-~~~~i~E~l~nl~~l~~~~~~~~~~lPlk~~g~~g~PvRv~a~~  216 (218)
T COG1878         153 TPSTDPGLSEDFPAHRLLLS-AGILIVENLTNLDKLPAGGAYLFLALPLKIKGGDGSPVRVLALV  216 (218)
T ss_pred             CCccCcccccchHHHHHHHh-CCCEEEEeeccccccCCCceEEEEecCceecCCCCCceEEEEEc
Confidence            99999874 36899999997 799999999 7999998766 89999999999999999999974

>PF04199 Cyclase: Putative cyclase; InterPro: IPR007325 Proteins in this family are thought to be cyclase enzymes

Probab=100.00  E-value=1.1e-39  Score=279.34  Aligned_cols=153  Identities=32%  Similarity=0.487  Sum_probs=105.6

Q ss_pred             EEEcceecCCCCCCCCCCCCCeeeeec----ceeccCCCeeeeeeEEecCCcccccccccc-cccCcccCCccccccccc
Q 023541           67 IYDITHRITSDMPSFGSKEGLGQYLWL----PKSIKNGSLANNSEMKLPSHTGTHVDAPGH-VFDHYFDAGYDVDTLDLG  141 (281)
Q Consensus        67 iiDLS~~i~~~mP~~p~~~~~~~~~~~----~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H-~~~~~~~~G~~id~l~l~  141 (281)
                      ||||||+|+++||+|| ++++......    ....++|..++.+.++|++|+|||+|||+| |.    ++|.+++++|++
T Consensus         1 iiDLS~~i~~~~p~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~H~GTHiDap~H~~~----~~g~~i~~~pl~   75 (171)
T PF04199_consen    1 IIDLSHPISNGMPVWP-DPPFEFETISSIEKDGSYPEGDGFNVDSITMSTHTGTHIDAPAHYFI----PDGATIDEIPLE   75 (171)
T ss_dssp             EEE----B-TT---GG--GGGS-EEE-------EEEEECTCEEEEEEEETTSSSEEE-GGGC-S----TTT-TGGGSSCC
T ss_pred             cEEcceEcCCCCCCCC-CCCcEEEEEeeecccccccccceEEEEEEEeCCCccCCCcccccccC----CCCCCHHHhhhh
Confidence            7999999999999999 7766432221    112345566999999999999999999999 77    899999999999


Q ss_pred             ceeccEEEEEcCC-----CccCCHHHHhcC------CCCCCCeEEEEEeccC-cccccccccccCCCcccCHHHHHHHHh
Q 023541          142 VLNGPALLVDVPR-----DKNITAEVMESL------NIPRGVRRVIFRTLNT-DRKLMFKREFDSSYVGFMKDGARWLVQ  209 (281)
Q Consensus       142 ~~~g~avvlDv~~-----~~~It~edle~~------~i~~g~d~VL~rTG~~-~~~~~~~~~y~~~~Pgls~eaA~~L~e  209 (281)
                      .|+|+|+|||+++     +..||.+||+++      .+++| |+|||||||. +++...+++|...+|||++|+|+||++
T Consensus        76 ~~~g~~vviD~~~~~~~~~~~It~~dl~~~~~~~~~~i~~g-divlirTG~~~~~~~~~~~~y~~~~p~ls~eaa~~L~~  154 (171)
T PF04199_consen   76 RFIGPAVVIDVSHDKQPPGEAITAEDLEAAWEAQGVEIRPG-DIVLIRTGWNDKRWEMGTEEYFNDFPGLSPEAAEWLAE  154 (171)
T ss_dssp             CCEEEEEEEETTT------SEE-HHHHTT------S---TT-SEEEEE-CG-GGGT--TSGCGGCT--EE-HCCHHHHHH
T ss_pred             hccCcEEEEeccccccCCCceEcHHHHHhhhcccccccCCC-cEEEEECCchhhhcccCCHhHccCCCcCCHHHHHHHHH
Confidence            9999999999998     457999999865      67777 9999999994 443334578888999999999999999


Q ss_pred             CCCceEEeecCCCcCCC
Q 023541          210 NTDIKLVGIDYLSAAAH  226 (281)
Q Consensus       210 ~~~V~~VGiD~~Svd~~  226 (281)
                      + +|++||+|++|+|++
T Consensus       155 ~-~v~~vG~D~~s~d~~  170 (171)
T PF04199_consen  155 R-GVKAVGIDTPSVDPP  170 (171)
T ss_dssp             C-T-SEEEESSSSS--S
T ss_pred             C-CCCEEEECCCCCCCC
Confidence            4 999999999999974

They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form a part of the active site.; PDB: 2B0A_A 3KRV_A 1R61_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	281
1r61_A	207	The Structure Of Predicted Metal-Dependent Hydrolas		1e-17

>pdb|1R61|A Chain A, The Structure Of Predicted Metal-Dependent Hydrolase From Bacillus Stearothermophilus Length = 207

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 66  QIYDITHRITSDMPSFGSKEGLGQYLWLPK--SIKNGSLANNSEMKLPSHTGTHVDAPGH 123
           ++YD+T  I   MP + +K         PK  +I NG +   S + +  HTGTH+DAP H
Sbjct: 4   KVYDVTAPIYEGMPVYKNKPE-----KQPKRTTITNGYV-TESRIDMDVHTGTHIDAPLH 57
Query: 124 VFDHYFDAGYDVDTLDLGVLNGPALLVDVPR-DKNITAEVMESLNIPRGVRRVIFRTLNT 182
           + +     G   +T+ L  L GP  L D+   +  IT + +  L+I  G   V+F+T N+
Sbjct: 58  MVE----GGATFETIPLNDLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNS 112
Query: 183 DRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREV 242
                F+  F   ++   +D AR+L  +  I+ VGID L      +  P+H        V
Sbjct: 113 -----FEDAFHFEFIFVAEDAARYLA-DKQIRGVGIDALGIERAQEGHPTHKTLFSAG-V 165
Query: 243 ILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILI 280
           I++EGL+L  VP G Y +    L+L+G + +P R +L 
Sbjct: 166 IIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLF 203

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	281
1r61_A	207	Metal-dependent hydrolase; zinc-dependent hydrolas	2e-53
2b0a_A	186	Hypothetical protein MJ0783; structural genomics,	2e-33
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A Length = 207

 Score =  171 bits (436), Expect = 2e-53
 Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 17/216 (7%)

Query: 66  QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
           ++YD+T  I   MP + +K          ++         S + +  HTGTH+DAP H+ 
Sbjct: 4   KVYDVTAPIYEGMPVYKNKPEK----QPKRTTITNGYVTESRIDMDVHTGTHIDAPLHMV 59

Query: 126 DHYFDAGYDVDTLDLGVLNGPALLVDVPR-DKNITAEVMESLNIPRGVRRVIFRTLNTDR 184
           +     G   +T+ L  L GP  L D+   +  IT + +  L+I  G   V+F+T N+  
Sbjct: 60  EG----GATFETIPLNDLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNSFE 114

Query: 185 KLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVIL 244
                  F   ++   +D AR+L     I+ VGID L      +  P+H        VI+
Sbjct: 115 D-----AFHFEFIFVAEDAARYLADK-QIRGVGIDALGIERAQEGHPTHKTLF-SAGVII 167

Query: 245 VEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILI 280
           +EGL+L  VP G Y +    L+L+G + +P R +L 
Sbjct: 168 IEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLF 203

>2b0a_A Hypothetical protein MJ0783; structural genomics, PSI, protein STRU initiative; 1.45A {Methanocaldococcus jannaschii} SCOP: c.8.8.1 Length = 186

 Score =  119 bits (300), Expect = 2e-33
 Identities = 43/217 (19%), Positives = 79/217 (36%), Gaps = 35/217 (16%)

Query: 66  QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
           +I D+T  +  + P  G  E     L + +   +G     SE+ + SH  TH+D P HV 
Sbjct: 1   EILDLTQTL-INFPRPGDPE-----LRIIEKKIDG--FIVSEIIMGSHLCTHIDYPKHVG 52

Query: 126 DHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
                   +      G++ G    + +        +      +P     ++  T  +   
Sbjct: 53  LE------NRIPFKDGIIKGKGYCISL--------DDFPGNKLPAC-DILLIYTGFSKY- 96

Query: 186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILV 245
              + E+              ++  ++IK VGID  +          H   L    ++++
Sbjct: 97  -WGRDEYFEKIPEI--PFLDDII-KSNIKCVGIDACTI----GGFEEHKRLL-SNNILII 147

Query: 246 EGLK--LDGVPAGLYNIHCLHLRLLGAEGSPIRCILI 280
           E L   L  +    +    L L++   + SPIRCI I
Sbjct: 148 ENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAI 184

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 28/211 (13%), Positives = 64/211 (30%), Gaps = 49/211 (23%)

Query: 78  MPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAG-YDVD 136
           +   G            K+     +A +      S+          +F  + +    +  
Sbjct: 158 VLGSG------------KT----WVALDV---CLSY-KVQCKMDFKIF--WLNLKNCNSP 195

Query: 137 TLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREF---- 192
              L +L    LL  +  D N T+    S NI   +  +        R+L+  + +    
Sbjct: 196 ETVLEMLQ--KLLYQI--DPNWTSRSDHSSNIKLRIHSIQAE----LRRLLKSKPYENCL 247

Query: 193 -------DSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFL----EGRE 241
                  ++          + L+     ++   D+LSAA    +   H+       E + 
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQV--TDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 242 VIL-VEGLKLDGVPAGLYNIHCLHLRLLGAE 271
           ++L     +   +P  +   +   L ++   
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	281
1r61_A	207	Metal-dependent hydrolase; zinc-dependent hydrolas	100.0
2b0a_A	186	Hypothetical protein MJ0783; structural genomics,	100.0

>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A

Probab=100.00  E-value=1.6e-56  Score=394.84  Aligned_cols=202  Identities=31%  Similarity=0.530  Sum_probs=181.7

Q ss_pred             CCEEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCcccccccccce
Q 023541           64 NGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVL  143 (281)
Q Consensus        64 ~~~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~l~l~~~  143 (281)
                      ++|+|||||+++++||+||++++++.  ....+.++ + +|.+.++|++|+|||+|||+||.    ++|.+++++|++.|
T Consensus         2 ~m~~iDLs~~i~~~~p~~pg~~~~~~--~~~~~~~~-~-~~~~~i~~~~H~GTH~Dap~H~~----~~g~~i~~~pl~~~   73 (207)
T 1r61_A            2 AMKVYDVTAPIYEGMPVYKNKPEKQP--KRTTITNG-Y-VTESRIDMDVHTGTHIDAPLHMV----EGGATFETIPLNDL   73 (207)
T ss_dssp             CCCEEECCCCBCTTCCCGGGCGGGSC--EEEEEEET-T-EEEEEEEEETTSSSEEECCGGGS----CSSCTTCCCCCTTT
T ss_pred             CCEEEECcCcccCCCCCCCCCCCeEE--EEeeecCC-c-eEEeEEEECCCCchhhchHhhcC----CCCcChhhCChhHc
Confidence            46899999999999999999987643  22233344 3 99999999999999999999999    79999999999999


Q ss_pred             eccEEEEEcCCC-ccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          144 NGPALLVDVPRD-KNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       144 ~g~avvlDv~~~-~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      +|||||||+++. ..||.+||++++|++| |+|||||||++     +++|..++||+++|+|+||+++ +|++||+|++|
T Consensus        74 ~g~~vviD~~~~~~~It~~dl~~~~i~~g-d~vlirTg~~~-----~~~y~~~~pgls~eaa~~L~~~-~v~~vG~D~~s  146 (207)
T 1r61_A           74 VGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNSF-----EDAFHFEFIFVAEDAARYLADK-QIRGVGIDALG  146 (207)
T ss_dssp             EEEEEEEECTTCCSEECHHHHTTSCCCTT-CEEEEECGGGG-----CCSCCTTCCEECHHHHHHHHHH-TCSEEECSSSC
T ss_pred             cceEEEEEEeCCCCccCHHHHHhccCCCC-cEEEEECCCCC-----chhhcCCCcccCHHHHHHHHHC-CCCEEEEcCCc
Confidence            999999999864 4799999999999888 89999999975     4567788999999999999995 99999999999


Q ss_pred             cCCCCCCcHhHHhhhhCCCeeEEEcccCCCCCCCcEEEEEeccccCCCCccceeeEEEC
Q 023541          223 AAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       223 vd~~~~~~p~H~~lL~~~gI~iiE~LnLd~L~~~~~~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      +|+.+...++|+.||+ +||+|+|||+|++|++++|+|+|+||||+|++|||||+||++
T Consensus       147 ~d~~~~~~~~H~~ll~-~gi~iiE~l~L~~L~~~~f~l~~~Plki~g~~gsPvR~vAi~  204 (207)
T 1r61_A          147 IERAQEGHPTHKTLFS-AGVIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLFD  204 (207)
T ss_dssp             SCCSCTTCHHHHHHHH-TTCEEEESCCCTTCCSEEEEEEEEECCBTTCSEEEEEEEEEC
T ss_pred             cCCCCCCCHHHHHHHH-cCCeEEEEeEhhcCCCCcEEEEEECccCCCCcccCeeEEEEe
Confidence            9987533399999996 899999999999999999999999999999999999999985

>2b0a_A Hypothetical protein MJ0783; structural genomics, PSI, protein STRU initiative; 1.45A {Methanocaldococcus jannaschii} SCOP: c.8.8.1

Probab=100.00  E-value=2.1e-49  Score=344.14  Aligned_cols=180  Identities=22%  Similarity=0.301  Sum_probs=159.0

Q ss_pred             EEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCccccc-ccccc--
Q 023541           66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDT-LDLGV--  142 (281)
Q Consensus        66 ~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~-l~l~~--  142 (281)
                      |+||||||+++  |+||++++++...     .+++ .+|.+.++|++|+|||+|||+||.         +++ +|++.  
T Consensus         1 ~~iDLs~~i~~--p~~pg~~~~~~~~-----~~~~-g~~~~~i~~~~H~GTHiDap~H~~---------id~~ipl~~g~   63 (186)
T 2b0a_A            1 EILDLTQTLIN--FPRPGDPELRIIE-----KKID-GFIVSEIIMGSHLCTHIDYPKHVG---------LENRIPFKDGI   63 (186)
T ss_dssp             CEEECBCCCCS--CCCTTSCCCEEEE-----EEET-TEEEEEEECCTTSSSEEECGGGGT---------CCCCCSSGGGC
T ss_pred             CEEEeeeEecC--CcCCCCCCcEEEE-----ecCC-cEEEEEEEecCCcccCccchhhee---------ecccccCCCCe
Confidence            58999999998  9999998875322     2222 389999999999999999999984         899 99999  


Q ss_pred             eeccEEEEEcCCCccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          143 LNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       143 ~~g~avvlDv~~~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      |+|||||||++   .||++     +|++| |+|||||||++++  .+++|. ++||+ +|+|+||++ ++|++||+|++|
T Consensus        64 ~~g~~vviD~~---~It~~-----~i~~g-d~vlirTg~~~~~--~~~~~~-~~pgl-~eaa~~L~~-~~v~~vG~D~~s  129 (186)
T 2b0a_A           64 IKGKGYCISLD---DFPGN-----KLPAC-DILLIYTGFSKYW--GRDEYF-EKIPE-IPFLDDIIK-SNIKCVGIDACT  129 (186)
T ss_dssp             EEEEEEEEETT---TCSSC-----CCCSC-SEEEEECSGGGGT--TSGGGG-GCCCC-CTTHHHHHH-SCCCEEEESSSC
T ss_pred             EEeEEEEEEEe---ccCHH-----HCCCC-cEEEEECCchhhc--CCchhh-cCCCH-HHHHHHHHH-CCCCEEEEcCCC
Confidence            99999999994   57766     47777 8999999998763  235666 89999 999999999 499999999999


Q ss_pred             cCCCCCCcHhHHhhhhCCCeeEEEccc--CCCCCCCcEEEEEeccccCCCCccceeeEEEC
Q 023541          223 AAAHDDLLPSHYEFLEGREVILVEGLK--LDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       223 vd~~~~~~p~H~~lL~~~gI~iiE~Ln--Ld~L~~~~~~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      +|.    +|+|+.||+ +|++++|||+  |++|++++|+++|+||||+|++|||||+||+.
T Consensus       130 ~d~----~p~H~~ll~-~gi~iiE~l~~nL~~l~~~~f~l~~~Plki~g~~gsP~R~vAi~  185 (186)
T 2b0a_A          130 IGG----FEEHKRLLS-NNILIIENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAIL  185 (186)
T ss_dssp             SSS----HHHHHHHHH-TTCEEEECBCGGGGGGBTCEEEEEEEECSCCSCSEEEEEEEEEE
T ss_pred             CCC----cHHHHHHHH-CCcEEEEehhhhHhhCCCCcEEEEEECcccCCCcccCeEEEEEc
Confidence            997    999999997 8999999995  99999999999999999999999999999983

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	281
d1r61a_	205	c.8.8.1 (A:) Unnamed protein {Bacillus stearotherm	1e-39
d2b0aa1	186	c.8.8.1 (A:1-186) Hypothetical protein MJ0783 {Met	3e-24

>d1r61a_ c.8.8.1 (A:) Unnamed protein {Bacillus stearothermophilus [TaxId: 1422]} Length = 205

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Unnamed protein
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =  135 bits (341), Expect = 1e-39
 Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 17/216 (7%)

Query: 66  QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
           ++YD+T  I   MP +   +   +      +I NG     S + +  HTGTH+DAP H  
Sbjct: 4   KVYDVTAPIYEGMPVY---KNKPEKQPKRTTITNGY-VTESRIDMDVHTGTHIDAPLH-- 57

Query: 126 DHYFDAGYDVDTLDLGVLNGPALLVDVPR-DKNITAEVMESLNIPRGVRRVIFRTLNTDR 184
               + G   +T+ L  L GP  L D+   +  IT + +  L+I  G   V+F+T N   
Sbjct: 58  --MVEGGATFETIPLNDLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKN--- 111

Query: 185 KLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVIL 244
              F+  F   ++   +D AR+L     I+ VGID L      +  P+H        VI+
Sbjct: 112 --SFEDAFHFEFIFVAEDAARYLADK-QIRGVGIDALGIERAQEGHPTHKTLFS-AGVII 167

Query: 245 VEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILI 280
           +EGL+L  VP G Y +    L+L+G + +P R +L 
Sbjct: 168 IEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLF 203

>d2b0aa1 c.8.8.1 (A:1-186) Hypothetical protein MJ0783 {Methanococcus jannaschii [TaxId: 2190]} Length = 186

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Hypothetical protein MJ0783
species: Methanococcus jannaschii [TaxId: 2190]

 Score = 94.4 bits (234), Expect = 3e-24
 Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 35/217 (16%)

Query: 66  QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVF 125
           +I D+T  +  + P  G  E     L + +   +G     SE+ + SH  TH+D P HV 
Sbjct: 1   EILDLTQTL-INFPRPGDPE-----LRIIEKKIDG--FIVSEIIMGSHLCTHIDYPKHVG 52

Query: 126 DHYFDAGYDVDTLDLGVLNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRK 185
                          G++ G    + +                      ++  T  +   
Sbjct: 53  LENR------IPFKDGIIKGKGYCISLDDFPGNK---------LPACDILLIYTGFSKY- 96

Query: 186 LMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLLPSHYEFLEGREVILV 245
              + E+              ++++ +IK VGID  +           ++ L    ++++
Sbjct: 97  -WGRDEYFEKIPEIP--FLDDIIKS-NIKCVGIDACT-----IGGFEEHKRLLSNNILII 147

Query: 246 EGLK--LDGVPAGLYNIHCLHLRLLGAEGSPIRCILI 280
           E L   L  +    +    L L++   + SPIRCI I
Sbjct: 148 ENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAI 184

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	281
d1r61a_	205	Unnamed protein {Bacillus stearothermophilus [TaxI	100.0
d2b0aa1	186	Hypothetical protein MJ0783 {Methanococcus jannasc	100.0

>d1r61a_ c.8.8.1 (A:) Unnamed protein {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Unnamed protein
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=4.8e-59  Score=408.08  Aligned_cols=203  Identities=33%  Similarity=0.591  Sum_probs=184.8

Q ss_pred             CCCEEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCcccccccccc
Q 023541           63 ENGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGV  142 (281)
Q Consensus        63 ~~~~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~l~l~~  142 (281)
                      +.+|+||||||++++||+||++|+++..   ....+++ .+|.+.++|++|+|||+|||+||.    ++|++++++|++.
T Consensus         1 ~~mkiiDLS~~i~~~mP~~pg~p~~~~~---~~~~~~~-~~~~~~i~~~~H~GTHiDaP~H~~----~~g~~i~~~~l~~   72 (205)
T d1r61a_           1 AAMKVYDVTAPIYEGMPVYKNKPEKQPK---RTTITNG-YVTESRIDMDVHTGTHIDAPLHMV----EGGATFETIPLND   72 (205)
T ss_dssp             CCCCEEECCCCBCTTCCCGGGCGGGSCE---EEEEEET-TEEEEEEEEETTSSSEEECCGGGS----CSSCTTCCCCCTT
T ss_pred             CCcEEEEeccCccCCCccCCCCCcceEE---EEEccCC-cEEEEEEEECCcCccccccHHHhc----CCCCceeeEChhH
Confidence            3689999999999999999999876432   1223333 489999999999999999999999    8999999999999


Q ss_pred             eeccEEEEEcCC-CccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCC
Q 023541          143 LNGPALLVDVPR-DKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYL  221 (281)
Q Consensus       143 ~~g~avvlDv~~-~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~  221 (281)
                      |+|+|+|||+++ ...|++++++..+|++| |+|||||||+     +.++|..++||+++|+|+||+++ +|++||+|++
T Consensus        73 ~~g~~vviD~~~~~~~I~~~~l~~~~i~~g-d~vl~~T~~~-----~~~~~~~~~p~l~~eaa~~L~~~-~i~~iG~D~~  145 (205)
T d1r61a_          73 LVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNS-----FEDAFHFEFIFVAEDAARYLADK-QIRGVGIDAL  145 (205)
T ss_dssp             TEEEEEEEECTTCCSEECHHHHTTSCCCTT-CEEEEECGGG-----GCCSCCTTCCEECHHHHHHHHHH-TCSEEECSSS
T ss_pred             hCceEEEEEeecccccccHhHHhhccCCCC-cEEEEecccc-----CCccccCCCCccCHHHHHHHHhC-ceEEEEEccc
Confidence            999999999987 56799999999999988 8999999995     34678899999999999999995 9999999999


Q ss_pred             CcCCCCCCcHhHHhhhhCCCeeEEEcccCCCCCCCcEEEEEeccccCCCCccceeeEEEC
Q 023541          222 SAAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       222 Svd~~~~~~p~H~~lL~~~gI~iiE~LnLd~L~~~~~~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      |+|..++.+++|++||+ +||+|+|||||++|++++|.|+|+||||+|+||||||+|||+
T Consensus       146 svd~~~~~~~~H~~ll~-~gi~iiE~lnL~~l~~~~~~~~~~Plki~g~~gsP~R~vA~e  204 (205)
T d1r61a_         146 GIERAQEGHPTHKTLFS-AGVIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLFD  204 (205)
T ss_dssp             CSCCSCTTCHHHHHHHH-TTCEEEESCCCTTCCSEEEEEEEEECCBTTCSEEEEEEEEEC
T ss_pred             cccccccccHHHHHHHH-CCcEEEEeCchhcCCCCcEEEEEECccCCCCCccceEEEEEc
Confidence            99998889999999997 799999999999999999999999999999999999999986

>d2b0aa1 c.8.8.1 (A:1-186) Hypothetical protein MJ0783 {Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Hypothetical protein MJ0783
species: Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=1e-47  Score=331.23  Aligned_cols=182  Identities=23%  Similarity=0.320  Sum_probs=155.8

Q ss_pred             EEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCcccccccccceec
Q 023541           66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVLNG  145 (281)
Q Consensus        66 ~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~l~l~~~~g  145 (281)
                      |+|||||++. ++| |||+|.++.  .  +...+|  |+.+.++|++|+|||+|||.||.    ++|.++.++  ..+.|
T Consensus         1 ~iiDLt~~~~-~~p-~pgdp~~~~--~--~~~~dg--~~~~~i~~~~H~GTHiDaP~H~~----~~g~~~~~~--~~~~~   66 (186)
T d2b0aa1           1 EILDLTQTLI-NFP-RPGDPELRI--I--EKKIDG--FIVSEIIMGSHLCTHIDYPKHVG----LENRIPFKD--GIIKG   66 (186)
T ss_dssp             CEEECBCCCC-SCC-CTTSCCCEE--E--EEEETT--EEEEEEECCTTSSSEEECGGGGT----CCCCCSSGG--GCEEE
T ss_pred             CEEeCCCccC-CCC-CCCCCccEE--E--EecCCC--eEEEEEEecCcccceeccccccC----CCCCCcccc--hhhcC
Confidence            6899999996 578 999997752  1  222344  89999999999999999999998    788877665  45889


Q ss_pred             cEEEEEcCCCccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCCcCC
Q 023541          146 PALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLSAAA  225 (281)
Q Consensus       146 ~avvlDv~~~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~Svd~  225 (281)
                      ++++||++.        ++..+|++| |+|||||||++++  .+++|..++|++  ++|+||+++ +|++||+|++|+|.
T Consensus        67 ~~~~id~~~--------~~~~~i~~g-d~vli~TG~~~~~--~~~~y~~~~p~~--~aa~~L~~~-~i~~vG~D~~s~~~  132 (186)
T d2b0aa1          67 KGYCISLDD--------FPGNKLPAC-DILLIYTGFSKYW--GRDEYFEKIPEI--PFLDDIIKS-NIKCVGIDACTIGG  132 (186)
T ss_dssp             EEEEEETTT--------CSSCCCCSC-SEEEEECSGGGGT--TSGGGGGCCCCC--TTHHHHHHS-CCCEEEESSSCSSS
T ss_pred             ceEEechhc--------cccCcCCCC-cEEEEEcCchhhc--CcchhhcccchH--HHHHHHHHC-CCcEEEEcCCCccc
Confidence            999999974        334567787 9999999997653  346777788865  699999995 99999999999875


Q ss_pred             CCCCcHhHHhhhhCCCeeEEEcc--cCCCCCCCcEEEEEeccccCCCCccceeeEEE
Q 023541          226 HDDLLPSHYEFLEGREVILVEGL--KLDGVPAGLYNIHCLHLRLLGAEGSPIRCILI  280 (281)
Q Consensus       226 ~~~~~p~H~~lL~~~gI~iiE~L--nLd~L~~~~~~~~a~PLki~Ga~GsPvR~vAi  280 (281)
                          +++|+.||+ +||+++|||  ||++|++++|+|+|+||||+|+||||||+|||
T Consensus       133 ----~~~H~~ll~-~gi~iiE~L~~nL~~l~~~~~~~~~~PLki~g~~GsPvR~iAi  184 (186)
T d2b0aa1         133 ----FEEHKRLLS-NNILIIENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAI  184 (186)
T ss_dssp             ----HHHHHHHHH-TTCEEEECBCGGGGGGBTCEEEEEEEECSCCSCSEEEEEEEEE
T ss_pred             ----chhheeecc-CCEEEhhhhhhhHhhCCCCeEEEEEECCcCCCccccccEEEEE
Confidence                799999997 799999998  79999999999999999999999999999998