Citrus Sinensis ID: 023548

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
Protein Sequence
MFTVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccHHHHHHHHHHHHccHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEcccccHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccccccccccccccccHHcccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccc
Coil and Loop (DISEMBL)
mftvtnhfcFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLsrciyngrleiwpskdwelesiHEFEVLEMIREHISTVIGLrancsvtdswaTTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHlthrnslqfpeawsyglkqnqvvgcvnntqsislgrgtnghelkqenlkcyvmgfdpeTLQRCAKLRSREAVNLVEkhscalfgdgqtglldtdeVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Flexible Loop (DISEMBL)
MFTVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGrleiwpskdweLESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Low Complexity Region (SEG)
MFTVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Disordered region (IsUnstruct)
**TVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYK****
Disordered Region (DISOPRED)
*****NHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSR******************SIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEE**********************************************************KCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLK**
Disordered Region (DISEMBL)
MFTVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Disordered Region (DISPRO)
MFTVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH**********************************************LKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLK*N
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFTVTNHFCFLNARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
224069880	275	predicted protein [Populus trichocarpa]	0.950	0.970	0.754	1e-113
255580495	408	conserved hypothetical protein [Ricinus	0.950	0.654	0.727	1e-111
225467702	380	PREDICTED: uncharacterized protein LOC10	0.932	0.689	0.665	1e-99
356558985	388	PREDICTED: uncharacterized protein LOC10	0.928	0.672	0.656	8e-95
449464112	388	PREDICTED: uncharacterized protein LOC10	0.932	0.675	0.643	2e-93
356504408	393	PREDICTED: uncharacterized protein LOC10	0.928	0.664	0.641	2e-91
357513325	372	hypothetical protein MTR_8g012420 [Medic	0.943	0.712	0.619	9e-91
356566244	353	PREDICTED: uncharacterized protein LOC10	0.875	0.696	0.585	2e-84
297833518	371	hypothetical protein ARALYDRAFT_896892 [	0.846	0.641	0.600	4e-83
449527687	251	PREDICTED: uncharacterized protein LOC10	0.868	0.972	0.626	7e-83

>gi|224069880|ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1| predicted protein [Populus trichocarpa]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/269 (75%), Positives = 231/269 (85%), Gaps = 2/269 (0%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           +RIA+LKEHECQ AVEDVMYML+LYKFSEIRV LVPKLSRCIYNGRLEI PSKDWELESI
Sbjct: 8   QRIAELKEHECQVAVEDVMYMLVLYKFSEIRVPLVPKLSRCIYNGRLEIRPSKDWELESI 67

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H FEVLEM+REH+STVIGL+AN SV DSWATTE+QR RLGRVY ASILYGYFLKSASLR+
Sbjct: 68  HSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRLGRVYAASILYGYFLKSASLRH 127

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAW-SYGLKQNQVVGCVNNTQSISLGRGTNGHELKQ 192
           +LE CL   HQD+HL HR++LQFPE+  SYGL  N V G ++N QS S G   N  + + 
Sbjct: 128 HLEWCLVLPHQDIHLGHRSTLQFPESLPSYGL-TNLVFGHISNKQSTSQGTRLNRPKSEH 186

Query: 193 ENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLK 252
           E LKCY+MGFD ETLQRCAKL+S+EAVNL+EKHSCALFGD +TG+L+ DEVILTSFSSLK
Sbjct: 187 EKLKCYMMGFDSETLQRCAKLKSKEAVNLIEKHSCALFGDEKTGVLENDEVILTSFSSLK 246

Query: 253 RLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           RLVLEA+AFG FLWD EE  ++VYKLK+N
Sbjct: 247 RLVLEAVAFGCFLWDTEEDVNSVYKLKDN 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580495|ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis] gi|223529318|gb|EEF31286.1| conserved hypothetical protein [Ricinus communis]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/268 (72%), Positives = 228/268 (85%), Gaps = 1/268 (0%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIAQLKEHECQ AVEDVMYMLI  KFSEIRV LVPKLSRCIYNGRLEI PSKDWELESI
Sbjct: 142 RRIAQLKEHECQIAVEDVMYMLIFSKFSEIRVPLVPKLSRCIYNGRLEIGPSKDWELESI 201

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H FEVLEMI+EH+ TVIGLRAN SVTDSWATTEIQRL+LGRVY AS+LYGYFLKSASLR+
Sbjct: 202 HSFEVLEMIKEHVCTVIGLRANSSVTDSWATTEIQRLQLGRVYAASVLYGYFLKSASLRH 261

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
           YLE+C+A +H ++HL+ R   Q+PE+ S+GL  N V   ++N QS S G+G+   + ++ 
Sbjct: 262 YLEQCIAVSHHNVHLSCRTVRQYPESISHGLT-NIVFRRISNMQSGSAGQGSIKQDWQRG 320

Query: 194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKR 253
            L+CYVMGFD ETLQRCAKL+S+EA+NL+EKHS ALFG+  TG L+ DEVILTSFSSLKR
Sbjct: 321 KLRCYVMGFDAETLQRCAKLKSKEAMNLIEKHSSALFGNDNTGSLENDEVILTSFSSLKR 380

Query: 254 LVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           LVLEA+AFGSFLWD EEY ++++KL EN
Sbjct: 381 LVLEAVAFGSFLWDTEEYVNSIFKLSEN 408

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225467702|ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis vinifera]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 179/269 (66%), Positives = 220/269 (81%), Gaps = 7/269 (2%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIA+LKE ECQ AVEDVMY+LI YKFSEIRV LVP+LSRCIYNGRLEIWP++DW LE I
Sbjct: 118 RRIAELKERECQIAVEDVMYLLIFYKFSEIRVHLVPRLSRCIYNGRLEIWPARDWALECI 177

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H FEVLEMI+EH++TV+G +   +VT++WATT+I+R +LG++Y ASILYGYFLKSASLR+
Sbjct: 178 HNFEVLEMIKEHLTTVLGWKPKSNVTENWATTQIRRFQLGQIYAASILYGYFLKSASLRH 237

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
           +LE  L  +H DL  ++ +       WSYGLK +  +G   ++Q  SLG  ++  E K+E
Sbjct: 238 HLEMSLVHSHHDLPSSNVSGF-----WSYGLK-DLFLGPNCSSQPTSLGEASSRQEEKEE 291

Query: 194 -NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLK 252
             L+CYVMGFDP+TLQRCAKL+S+EAVNLVEKHSCALFGD +TGLL+TD+VI TSFSS+K
Sbjct: 292 KKLRCYVMGFDPDTLQRCAKLKSKEAVNLVEKHSCALFGDEKTGLLETDDVISTSFSSMK 351

Query: 253 RLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           RLVLEA+AFGSFLWD EEY  +VY LKEN
Sbjct: 352 RLVLEAVAFGSFLWDTEEYVGSVYNLKEN 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558985|ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max]

 Score =  352 bits (904), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 176/268 (65%), Positives = 215/268 (80%), Gaps = 7/268 (2%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIAQ+KE++CQ AVEDVMY+LI YKFSEIRV +VPKLS C+YNGRLEI PSKDWELESI
Sbjct: 128 RRIAQVKENQCQIAVEDVMYLLIFYKFSEIRVPMVPKLSSCLYNGRLEILPSKDWELESI 187

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H  EVL+MIREHI+TV GLRA  SVT+ WATT++++  L RVYVASILYGYFLKS SLRY
Sbjct: 188 HSSEVLDMIREHITTVTGLRAKSSVTECWATTQVRQFLLARVYVASILYGYFLKSVSLRY 247

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
           +LE  L+ A+ DLHL HR S+ F    SYG K + + G ++N    SLG+G    E + E
Sbjct: 248 HLERNLSLANHDLHLGHRTSVMF----SYGFK-DAIFGHLSNMP--SLGQGLIRPEEEIE 300

Query: 194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKR 253
           +LKCYVM F P +LQRCA+LRS+EAVNLV  +SCALF + ++G ++ D+VILTSFSSLKR
Sbjct: 301 DLKCYVMSFHPGSLQRCARLRSKEAVNLVGSYSCALFNNKESGSVENDDVILTSFSSLKR 360

Query: 254 LVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           LVLEA+AFGSFLW+ E+Y D VYKLK++
Sbjct: 361 LVLEAVAFGSFLWETEDYIDNVYKLKDD 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464112|ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus]

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/275 (64%), Positives = 213/275 (77%), Gaps = 13/275 (4%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIAQLKEHECQ AV+DVMYMLI Y+FSEIRV LVPKLSRC+YNGRLEI P KDWELESI
Sbjct: 120 RRIAQLKEHECQIAVQDVMYMLIFYRFSEIRVNLVPKLSRCVYNGRLEILPCKDWELESI 179

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           +E EVL MI+EHI+TVIGLRA+ SVTD+WA T I++  LGRVYVASILYGYFLKSA LR+
Sbjct: 180 YELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLGRVYVASILYGYFLKSAILRH 239

Query: 134 YLEECLASAHQDLHLTHRNS------LQFPEAWSYGLKQNQVVGCVNNTQSISLGRG-TN 186
           +LE+ LA  +     THRN       LQFPE   YG + N + G ++N  S+   +  ++
Sbjct: 240 HLEQKLAIPN-----THRNGGHPKTFLQFPEMCLYGFR-NLLSGRLSNMLSVPHNQVLSS 293

Query: 187 GHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILT 246
             E + E LK ++ GFD E LQRCAKL+S+EA+NL+E HS AL G+ + G  + +EVI+T
Sbjct: 294 SQETEPEKLKRFLTGFDSEALQRCAKLKSKEALNLIENHSYALLGNEEVGFFENNEVIVT 353

Query: 247 SFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           SFSSLKRLVLEA+AFGSFLWDAEEY D +YKLKEN
Sbjct: 354 SFSSLKRLVLEAVAFGSFLWDAEEYVDTIYKLKEN 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504408|ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max]

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 172/268 (64%), Positives = 211/268 (78%), Gaps = 7/268 (2%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIA +KE++CQ AVEDV+Y+LI YKFSEIRV +VPKLS C+YNGRLEI PSKDWELESI
Sbjct: 133 RRIALVKENQCQIAVEDVIYLLIFYKFSEIRVPMVPKLSSCLYNGRLEILPSKDWELESI 192

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H  EVL+MIREHI+TV GLRA  SVT+ WATT +++  L RVYVASILYGYFLKS SLRY
Sbjct: 193 HSLEVLDMIREHITTVTGLRAKSSVTECWATTHVRQFLLARVYVASILYGYFLKSVSLRY 252

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
           +LE  L+ A+ DLHL H+ SL      SYG K + + G ++N    SLG+G    E + E
Sbjct: 253 HLERNLSLANHDLHLGHKTSLM----CSYGFK-DAIFGHLSNMS--SLGQGLIRPEEELE 305

Query: 194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKR 253
           +LKCYVM F P +LQRCA+LRS+EAVNLV  +SCALF + ++G ++ D+VILTSFSSLKR
Sbjct: 306 DLKCYVMSFHPGSLQRCARLRSKEAVNLVGSYSCALFNNEESGSVENDDVILTSFSSLKR 365

Query: 254 LVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           LVLEA+AFGSFLW+ E+Y D VY LK++
Sbjct: 366 LVLEAVAFGSFLWEIEDYIDNVYNLKDD 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513325|ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula] gi|355520973|gb|AET01427.1| hypothetical protein MTR_8g012420 [Medicago truncatula]

 Score =  339 bits (869), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 166/268 (61%), Positives = 210/268 (78%), Gaps = 3/268 (1%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIA++KE++C+ AVED+M +LI +KFSEIR  LVPKLSRC+YNGRLEI PSKDWELESI
Sbjct: 108 RRIAEMKENQCEVAVEDIMSLLIFHKFSEIRAPLVPKLSRCLYNGRLEILPSKDWELESI 167

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H  EVL+MIREH++TV GL+A  SVT+SWATT++++  LGR+YVASILYGYFLKS SLRY
Sbjct: 168 HTLEVLDMIREHVTTVTGLKAKPSVTESWATTKVRQFLLGRIYVASILYGYFLKSVSLRY 227

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
           +LE  L  A+ D+H  HR +L F +   YG  ++ + G ++N + I  G+G    E + E
Sbjct: 228 HLERNLNLANHDVHPGHRTNLSFKDMCPYGF-EDDIFGHLSNMKPI--GQGLIRQEEEIE 284

Query: 194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKR 253
           +LKCYVM F P +LQRCAKLRS+EAVNLV  +S ALF       +D+D+VILTSFSSLKR
Sbjct: 285 DLKCYVMRFHPGSLQRCAKLRSKEAVNLVRSYSSALFNSEGFDSVDSDDVILTSFSSLKR 344

Query: 254 LVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           LVLEA+AFGSFLW+ E+Y D VYKLK++
Sbjct: 345 LVLEAVAFGSFLWETEDYIDNVYKLKDH 372

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566244|ref|XP_003551344.1| PREDICTED: uncharacterized protein LOC100794032 [Glycine max]

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/268 (58%), Positives = 196/268 (73%), Gaps = 22/268 (8%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIAQ+KE+E   A+ DVMY+LILYKFSEIRV LVPKLS C+Y+GRLEI PSKDW+LESI
Sbjct: 105 RRIAQVKENESMIAIADVMYLLILYKFSEIRVNLVPKLSSCLYDGRLEILPSKDWDLESI 164

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H  EVL++IR+H+STV GLR+N SV +SW TT I+++ L RVYVASILYGYFLKS SLRY
Sbjct: 165 HSLEVLDIIRKHVSTVTGLRSNPSVRESWETTPIRQVWLARVYVASILYGYFLKSVSLRY 224

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
            LE  L+ +  D H  H+    F + +  G K  + +                      E
Sbjct: 225 NLERSLSLSDHDFHHGHKIGPSFHDMYHSGAKDEEEI----------------------E 262

Query: 194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKR 253
           +LKCYV GF P + +RCAKLRS+EAV+LVE HS ALFGDG++GL   D++I+TSFSSL+R
Sbjct: 263 DLKCYVTGFHPGSFERCAKLRSKEAVHLVESHSNALFGDGKSGLSQHDDIIVTSFSSLRR 322

Query: 254 LVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           LVLEA+AFGSFLW+ E+Y D+VYKLK+ 
Sbjct: 323 LVLEAVAFGSFLWETEDYIDSVYKLKDQ 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833518|ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 161/268 (60%), Positives = 193/268 (72%), Gaps = 30/268 (11%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           RRIAQLKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRLEIWPSKDWELESI
Sbjct: 121 RRIAQLKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESI 180

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L +VY ASILYGYFLKSASLR+
Sbjct: 181 HSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRH 240

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQE 193
            LE  L+    DLH +             G  ++ ++GC   T +  +          ++
Sbjct: 241 QLECSLS----DLHGS-------------GYLKSPILGCSFTTSTAQIS--------SKQ 275

Query: 194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKR 253
            L+ Y+ GFDPETLQRCAK R+ EA NL+EK S ALFG       ++DE I+TSFSSLKR
Sbjct: 276 QLRHYISGFDPETLQRCAKPRTEEARNLIEKQSLALFGTE-----ESDETIVTSFSSLKR 330

Query: 254 LVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           LVLEA+AFG+FLWD E Y D  YKLKEN
Sbjct: 331 LVLEAVAFGTFLWDTELYVDGAYKLKEN 358

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527687|ref|XP_004170841.1| PREDICTED: uncharacterized protein LOC101230760 [Cucumis sativus]

 Score =  313 bits (801), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 161/257 (62%), Positives = 196/257 (76%), Gaps = 13/257 (5%)

Query: 32  MYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG 91
           MYMLI Y+FSEIRV LVPKLSRC+YNGRLEI P KDWELESI+E EVL MI+EHI+TVIG
Sbjct: 1   MYMLIFYRFSEIRVNLVPKLSRCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIG 60

Query: 92  LRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHR 151
           LRA+ SVTD+WA T I++  LGRVYVASILYGYFLKSA LR++LE+ LA  +     THR
Sbjct: 61  LRADSSVTDNWAMTNIRQAHLGRVYVASILYGYFLKSAILRHHLEQKLAIPN-----THR 115

Query: 152 NS------LQFPEAWSYGLKQNQVVGCVNNTQSISLGRG-TNGHELKQENLKCYVMGFDP 204
           N       LQFPE   YG + N + G ++N  S+   +  ++  E + E LK ++ GFD 
Sbjct: 116 NGGHPKTFLQFPEMCLYGFR-NLLSGRLSNMLSVPHNQVLSSSQETEPEKLKRFLTGFDS 174

Query: 205 ETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSF 264
           E LQRCAKL+S+EA+NL+E HS AL G+ + G  + +EVI+TSFSSLKRLVLEA+AFGSF
Sbjct: 175 EALQRCAKLKSKEALNLIENHSYALLGNEEVGFFENNEVIVTSFSSLKRLVLEAVAFGSF 234

Query: 265 LWDAEEYADAVYKLKEN 281
           LWDAEEY D +YKLKEN
Sbjct: 235 LWDAEEYVDTIYKLKEN 251

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
TAIR|locus:2079626	368	AT3G07310 "AT3G07310" [Arabido	0.462	0.353	0.730	1.4e-76
TAIR|locus:2152516	344	AT5G48590 "AT5G48590" [Arabido	0.459	0.375	0.730	2.6e-71
TAIR|locus:2088490	427	AT3G17800 "AT3G17800" [Arabido	0.907	0.597	0.406	3.4e-45
TAIR|locus:2198055	423	AT1G48450 "AT1G48450" [Arabido	0.911	0.605	0.409	5.6e-45
TAIR|locus:2031760	406	AT1G32160 "AT1G32160" [Arabido	0.914	0.633	0.338	1.9e-35

TAIR|locus:2079626 AT3G07310 "AT3G07310" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
 Identities = 95/130 (73%), Positives = 111/130 (85%)

Query:    14 RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
             RRIA+LKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRLEIWPSKDWELESI
Sbjct:   119 RRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESI 178

Query:    74 HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
             +  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L +VY ASILYGYFLKSASLR+
Sbjct:   179 YSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRH 238

Query:   134 YLEECLASAH 143
              LE  L+  H
Sbjct:   239 QLECSLSDIH 248

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2152516 AT5G48590 "AT5G48590" [Arabidopsis thaliana (taxid:3702)]

 Score = 482 (174.7 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 95/130 (73%), Positives = 107/130 (82%)

Query:    14 RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
             RRIAQLKE +CQ A+ED+MYMLILYKFSEIRV LVPKL  CIYNGRLEI PSKDWELESI
Sbjct:   115 RRIAQLKESDCQIAIEDIMYMLILYKFSEIRVPLVPKLPSCIYNGRLEISPSKDWELESI 174

Query:    74 HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
             H F+VLE+I+EH + VI LR N S+TD  ATTEI + RL +VY AS+LYGYFLKSASLR+
Sbjct:   175 HSFDVLELIKEHSNAVISLRVNSSLTDDCATTEIDKNRLSKVYTASVLYGYFLKSASLRH 234

Query:   134 YLEECLASAH 143
              LE C  S H
Sbjct:   235 QLE-CSLSQH 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2088490 AT3G17800 "AT3G17800" [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 111/273 (40%), Positives = 159/273 (58%)

Query:    14 RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIY-NGRLEIWPSKDWELES 72
             RRIA+LKE+E +  +E+++Y L++ KF E  V LVP +S     +GR++ WP+K  +LE 
Sbjct:   158 RRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLER 217

Query:    73 IHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLR 132
             +H  E+ EMI  H++ ++G R      D  +  +I +LR+G+VY AS++YGYFLK    R
Sbjct:   218 LHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAASVMYGYFLKRVDQR 273

Query:   133 YYLEECLA--SAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHEL 190
             + LE+ +       D   T     +    +   +  +  VG      S    +G  G E+
Sbjct:   274 FQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHPEVGAFAGGVS---AKGF-GSEI 329

Query:   191 KQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT-----GLLDT--DEV 243
             K   L+ YVM FD ETLQR A +RSREAV ++EKH+ ALFG  +      G +D+  DE 
Sbjct:   330 KPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSSKDEQ 389

Query:   244 ILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 276
             I  SF  +KRLVLEA+ FGSFLWD E + DA Y
Sbjct:   390 IKISFGGMKRLVLEAVTFGSFLWDVESHVDARY 422

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0010224 "response to UV-B" evidence=IGI;IEP

TAIR|locus:2198055 AT1G48450 "AT1G48450" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 116/283 (40%), Positives = 163/283 (57%)

Query:    14 RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKL--SRCIYNGRLEIWPSKDWELE 71
             RRIA++KE E + A+E+++Y L++ KF +  V LVP +  S    +GR++ WP+ D ELE
Sbjct:   143 RRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELE 202

Query:    72 SIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASL 131
              +H  EV EMI+ H+S ++  R +    D  A  +I +L +G+VY AS++YGYFLK    
Sbjct:   203 RLHSPEVYEMIQNHLSIILKNRTD----DLTAVAQISKLGVGQVYAASVMYGYFLKRIDQ 258

Query:   132 RYYLEECL-----------ASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
             R+ LE+ +            S  Q      RN  +  E     +  NQ VG       I+
Sbjct:   259 RFQLEKTMRILPGGSDEGETSIEQAGRDVERNFYEEAEETYQAVSSNQDVGSF--VGGIN 316

Query:   181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT----- 235
                G +  ++KQ  LK YVM FD ETLQR A +RSRE+V ++EKH+ ALFG  +      
Sbjct:   317 ASGGFSS-DMKQSRLKTYVMSFDGETLQRYATIRSRESVGIIEKHTEALFGRPEIVITPQ 375

Query:   236 GLLDT--DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 276
             G +D+  DE I  SF  LKRLVLEA+ FGSFLWD E + D+ Y
Sbjct:   376 GTIDSSKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRY 418

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031760 AT1G32160 "AT1G32160" [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 93/275 (33%), Positives = 157/275 (57%)

Query:    14 RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYN-GRLEIWPSKDWELES 72
             +RI+++++ E +  + +++Y L++++F E  + ++P++       GR+++WP+++ +LE 
Sbjct:   133 KRISEVRDKERRKTLAEIIYCLVVHRFVEKGISMIPRIKPTSDPAGRIDLWPNQEEKLEV 192

Query:    73 IHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLR 132
             IH  +  EMI+ H+S+V+G     +V    +  +I +++LG++Y AS +YGYFL+    R
Sbjct:   193 IHSADAFEMIQSHLSSVLG--DGPAVGPLSSIVQIGKIKLGKLYAASAMYGYFLRRVDQR 250

Query:   133 YYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVN----NTQSISLGRGTNGH 188
             Y LE  + +  +    T R   + P    Y L     +  +     +    ++ R  N  
Sbjct:   251 YQLERTMNTLPKRPEKT-RERFEEPSP-PYPLWDPDSLIRIQPEEYDPDEYAIQR--NED 306

Query:   189 ELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDG-----QTGLLDT--D 241
             E     L+ YV   D +TLQR A +RS+EA+ L+EK + ALFG       + G LDT  D
Sbjct:   307 ESSSYGLRSYVTYLDSDTLQRYATIRSKEAMTLIEKQTQALFGRPDIRILEDGKLDTSND 366

Query:   242 EVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 276
             EV+  S S L  LVLEA+AFGSFLWD+E Y ++ Y
Sbjct:   367 EVLSLSVSGLAMLVLEAVAFGSFLWDSESYVESKY 401


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      281       281   0.00083  115 3  11 22  0.46    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  228 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.29u 0.16s 23.45t   Elapsed:  00:00:01
  Total cpu time:  23.29u 0.16s 23.45t   Elapsed:  00:00:01
  Start:  Fri May 10 07:28:33 2013   End:  Fri May 10 07:28:34 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002530 hypothetical protein (275 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	281
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	7e-15

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score = 68.0 bits (167), Expect = 7e-15
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 69  ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 128
            L      EVLE +R ++S ++G            T +  R  L ++  +S++ GYFL++
Sbjct: 17  RLADSASPEVLEAMRRNVSGLLGSL---PSDHFEVTIQTSRENLAQLLASSMMTGYFLRN 73

Query: 129 ASLRYYLEECL 139
           A  R  LE  L
Sbjct: 74  AEQRLELERSL 84

This family contains several uncharacterized plant proteins. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	281
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.94
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	97.75

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.94  E-value=4.3e-27  Score=184.59  Aligned_cols=83  Identities=29%  Similarity=0.395  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCcccccCCccccCCccchhhhccCchHHHHHHHHHHHHhhc
Q 023548           12 NARRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG   91 (281)
Q Consensus        12 LyrRIAevKe~Err~alEdImY~lIv~KF~~~~V~mvP~ls~~~~~Grl~~wp~~~~~Le~ihS~Ev~emI~~hl~~vLG   91 (281)
                      ||++|++++. |+..+++|                                          +|||||+|+|++||.++||
T Consensus         3 L~~yi~~l~p-e~~~~l~~------------------------------------------~~s~ev~e~m~~~v~~llG   39 (86)
T PF05542_consen    3 LLQYIQSLKP-ERIQQLSE------------------------------------------PASPEVLEAMKQHVSGLLG   39 (86)
T ss_pred             HHHHHHHCCH-HHHHHhhc------------------------------------------cCCHHHHHHHHHHHHHHHc
Confidence            8999999999 99999998                                          8999999999999999999


Q ss_pred             cc-cCCCCCCCcceEeechhhhhhHHHHHhhhhHhhhhhhhHhHHHHHHh
Q 023548           92 LR-ANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA  140 (281)
Q Consensus        92 ~~-~~~~~~~~~~~~~isr~~Lg~vyAAsmM~GYFLr~~eqR~~LE~sl~  140 (281)
                      ++ |++.++   ++++++|++||+||+++||+|||||++|+|++||++|+
T Consensus        40 ~l~p~~~~~---~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~   86 (86)
T PF05542_consen   40 NLSPSDQFN---VTIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK   86 (86)
T ss_pred             CCCCcccCc---ceeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence            99 877655   79999999999999999999999999999999999985

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=97.75  E-value=0.00012  Score=57.80  Aligned_cols=76  Identities=26%  Similarity=0.369  Sum_probs=69.0

Q ss_pred             hhhhhhhcCCHHHHHHHhhhhhHHHHHHHHHhhhhhccCCCCCCCCCCceEEechhhhHHHHHHHHhhhhhhhhhhh
Q 023548          194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEE  270 (281)
Q Consensus       194 ~Lr~YVm~fD~eTLqr~A~irSkEav~liEkht~ALFG~~~~g~~~~dE~i~isfs~LkrLVLEAVAFGSFLwDvEs  270 (281)
                      .|=.||.+.+|+++++-++..|.|+++.|++|+..+-|.-. -....+-.|.++-..|-+|..=++.+|=|||.+|-
T Consensus         2 ~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~-p~~~~~~~i~~s~~~La~L~~~~mm~GYfLr~~E~   77 (86)
T PF05542_consen    2 DLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLS-PSDQFNVTIQTSRENLAQLLAWSMMTGYFLRNAEQ   77 (86)
T ss_pred             hHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCC-CcccCcceeEECHHHHHHHHHHHHHHhHHHHHHHH
Confidence            57789999999999999999999999999999999999875 23456678999999999999999999999999884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00