Citrus Sinensis ID: 023578
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 280 | 2.2.26 [Sep-21-2011] | |||||||
| Q12486 | 218 | Putative uncharacterized | yes | no | 0.689 | 0.885 | 0.344 | 4e-24 | |
| Q8XIY6 | 214 | Putative pyrophosphatase | yes | no | 0.389 | 0.509 | 0.351 | 5e-07 | |
| Q3J8A0 | 225 | Phosphoglycolate phosphat | yes | no | 0.707 | 0.88 | 0.266 | 9e-07 | |
| Q4FPT7 | 230 | Phosphoglycolate phosphat | yes | no | 0.635 | 0.773 | 0.272 | 2e-06 | |
| Q7NW10 | 222 | Phosphoglycolate phosphat | yes | no | 0.564 | 0.711 | 0.264 | 2e-05 | |
| Q9CKJ5 | 224 | Phosphoglycolate phosphat | yes | no | 0.717 | 0.897 | 0.243 | 3e-05 | |
| P44755 | 224 | Phosphoglycolate phosphat | yes | no | 0.710 | 0.888 | 0.237 | 4e-05 | |
| Q2Y6G2 | 227 | Phosphoglycolate phosphat | yes | no | 0.157 | 0.193 | 0.454 | 9e-05 | |
| Q4QMY0 | 224 | Phosphoglycolate phosphat | yes | no | 0.710 | 0.888 | 0.241 | 0.0001 | |
| P94512 | 260 | Putative uncharacterized | yes | no | 0.289 | 0.311 | 0.302 | 0.0001 |
| >sp|Q12486|YOR31_YEAST Putative uncharacterized hydrolase YOR131C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR131C PE=1 SV=1 | Back alignment and function desciption |
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Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 68 LRGVVFDMDGTLTVPV-IDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR- 125
++ VVFDMDGTL +P FPAM A+ ED+ IDILH I++ + ++
Sbjct: 13 IKAVVFDMDGTLCLPQPWMFPAMRNAIGLEDK----------SIDILHFIDTLPTEKEKK 62
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-- 183
A+ I E + + +Q PG + +L I + + TRN+ V+ F RF +
Sbjct: 63 EAHDRIELVEAKAMKEMQPQPGLVDIMRYLTKNGISKNICTRNVGAPVETFVKRFIPSEL 122
Query: 184 --FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
F ++REFRP KP P PLLHI S ++P E++MVGDS DD+ G+ AG FT LL
Sbjct: 123 SRFDYIVTREFRPTKPQPDPLLHIASKLNIRPLEMIMVGDSF-DDMKSGRSAGCFTVLL- 180
Query: 242 ETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ + D V L+E++ +++
Sbjct: 181 -KNHVNGHLLLEHKELVDVSVEDLSEIIELIQ 211
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|Q8XIY6|PPAX_CLOPE Putative pyrophosphatase PpaX OS=Clostridium perfringens (strain 13 / Type A) GN=ppaX PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 155 LDSKKIRRGLITRNIKEAVDLFHNRFGI-----TF-SPALSREFRPYKPDPGPLLHICST 208
L SK I+ G++T + + GI TF +P ++ + +KPD P+L C
Sbjct: 93 LKSKGIKIGVVTSKKSDMAERGAKLMGIFKYFDTFITPEITTK---HKPDGEPVLKACEN 149
Query: 209 WEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSA---DDFTKSNLQPDFRVSSL 265
V P+E +MVGDS D +A GK AGA TC + +Y+A + +SN PDF V
Sbjct: 150 LGVSPSEALMVGDSPYDILA-GKNAGAKTCGV----KYTALPLEKLGESN--PDFYVDKP 202
Query: 266 TEVLSILE 273
E+L ++E
Sbjct: 203 LEILDLVE 210
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Clostridium perfringens (strain 13 / Type A) (taxid: 195102) EC: 3 EC: . EC: 6 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q3J8A0|GPH_NITOC Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_2493 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 71 VVFDMDGTL--TVPVIDF---PAMYRAVLGEDEYKRVKAENPTGIDILHH---IESWSPD 122
++ D+DGTL +VP + F M R L +V+ G++ L +++ +
Sbjct: 8 ILIDVDGTLVDSVPDLTFCTDTMMERLGLPLRGETKVRQWVGNGVERLIKRALVDNMEGE 67
Query: 123 LQRHAYQT-----IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH 177
+ YQ +A + R + PG + +L S+ R G +T +
Sbjct: 68 PEEDLYQKAETIFLALYADNTSKRSHLYPGVNEGLAWLKSQGYRVGCVTNKAAQFTYPLL 127
Query: 178 NRFGIT--FSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG 234
GI F +S + P KP P PLLH S + + P + +M+GDS+ D A RA
Sbjct: 128 TELGIIDYFEIVISGDTLPEKKPHPAPLLHAASHFGIAPEKALMIGDSISDVKAA--RAA 185
Query: 235 AFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
F + G D S QPD + SL E+ ++L
Sbjct: 186 NFQIVCLSYGYNHGVDIRDS--QPDSVIDSLIEIKNLL 221
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Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) (taxid: 323261) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q4FPT7|GPH_PSYA2 Phosphoglycolate phosphatase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=Psyc_2124 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 78/198 (39%), Gaps = 20/198 (10%)
Query: 71 VVFDMDGTLTVPVIDFPAMYRAVL---GEDEYKRVKAENPTGID--------ILHHIESW 119
++FD DGTL V D A+L G+ Y N G ++ IE
Sbjct: 6 LIFDFDGTLIDSVPDLADAVNAMLTTLGKAPYPIDTIRNWVGNGSRMLVERALVGKIEVS 65
Query: 120 SPDLQR----HAYQTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD 174
+L + HA Q D + + G + P L + + L+T V
Sbjct: 66 EGELAKETIDHAEQVFFDAYSKMGGSKTVAYPNVDSGLKKLKAAGFKLALVTNKPIRFVP 125
Query: 175 LFHNRFGI--TFSPALSREFRPYK-PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK 231
FG FS L + P K PDP PLLH+C + P + +M+GDS+ +D+ G+
Sbjct: 126 KILQFFGWHDIFSEVLGGDSLPTKKPDPAPLLHVCEVLNINPAQAVMIGDSI-NDILAGQ 184
Query: 232 RAGAFTCLLDETGRYSAD 249
A T L Y D
Sbjct: 185 NANMDTLGLSYGYNYGQD 202
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Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Psychrobacter arcticus (strain DSM 17307 / 273-4) (taxid: 259536) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q7NW10|GPH_CHRVO Phosphoglycolate phosphatase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=CV_2180 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 68 LRGVVFDMDGTLTVPVIDFPAMYRAV-----LGEDEYKRVKAENPTGIDIL--------H 114
++ V FD+DGTL + D A+ L + +R+K+ GI L
Sbjct: 6 IKAVAFDLDGTLVDSIPDLANAANAMREHLGLPPLDPERIKSHVGDGIASLVHRAITDER 65
Query: 115 HIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD 174
H E+ P +R + + D + PG G L + ++ +IT +
Sbjct: 66 HAEADGPLWERGYRFFVQRYREHLADHTTVYPGVRDGLGLLRALQLPLVMITNKSERLAV 125
Query: 175 LFHNRFGIT--FSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVGDSLKD 225
+ G+ FS + + P KP PLLH C +QP E+ MVGDS D
Sbjct: 126 PLAEQLGLRDHFSLIVGGDTLPEKKPSALPLLHCCQVLGIQPQELAMVGDSAND 179
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Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) (taxid: 243365) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q9CKJ5|GPH_PASMU Phosphoglycolate phosphatase OS=Pasteurella multocida (strain Pm70) GN=gph PE=3 SV=1 | Back alignment and function description |
|---|
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 29/230 (12%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKR-----VKAENPTGIDIL-HHIESW 119
T+ + + FD+DGTL + D + E + + V G DIL +W
Sbjct: 2 TQFKLIGFDLDGTLVNSLPDLALSVNSAFAEFDLPQAPEDLVLTWIGNGADILIARALAW 61
Query: 120 SPDLQRHAYQTIADFERQGLDR------------LQIM-PGTAQLCGFLDSKKIRRGLIT 166
+ + +T+ D + + L R L ++ P L K ++T
Sbjct: 62 A---KAQTGKTLNDEQIKALKRRFGFYYGENLCNLSVLYPNVKSTLETLKQKGYLLAVVT 118
Query: 167 RNIKEAVDLFHNRFGI--TFSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVGDSL 223
+ V FGI FS L + P KP P PL ++C + + P +V+ VGDS
Sbjct: 119 NKPTKHVQPVLQAFGIDHLFSELLGGQSLPAIKPHPAPLYYLCGKFGLYPKQVLFVGDS- 177
Query: 224 KDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
K+D+ AG L Y + + +PD+ ++L+ILE
Sbjct: 178 KNDILAAHTAGCAVVGLTYGYNY---NIPIAESKPDWVFDDFAQILTILE 224
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Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Pasteurella multocida (strain Pm70) (taxid: 272843) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|P44755|GPH_HAEIN Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gph PE=3 SV=1 | Back alignment and function description |
|---|
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 90/232 (38%), Gaps = 33/232 (14%)
Query: 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQ 124
T+ + + FD+DGTL + D + L E + E +L I + +P L
Sbjct: 2 NTQFKLIGFDLDGTLVNSLPDLALSVNSALAEFNLPQAPEE-----LVLTWIGNGAPVLI 56
Query: 125 RHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR----- 179
A + L ++ T + + + N+KE +++ +
Sbjct: 57 ARALDWAKKQTGKVLTETEVKQVTERFNFYYGENLCNVSRLYPNVKETLEILKEKGYVLA 116
Query: 180 ----------------FGI--TFSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVG 220
FGI FS L + P KP P PL ++C + +P +V+ VG
Sbjct: 117 VVTNKPTRHVQPVLAAFGIDHLFSEMLGGQSLPAIKPHPAPLYYLCGKFGFEPRQVLFVG 176
Query: 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
DS K+D+ G AG L Y+ +SN PD+ ++LSIL
Sbjct: 177 DS-KNDIIAGHAAGCAVVGLTYGYNYNI-PIRESN--PDWVFDDFAQLLSIL 224
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Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q2Y6G2|GPH_NITMU Phosphoglycolate phosphatase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=Nmul_A2370 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239
KPDP PLLH C +E+QP+++++VGDSL D A C+
Sbjct: 151 KPDPMPLLHACERFEIQPHDMLLVGDSLNDAQAARAAGSHVFCV 194
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Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) (taxid: 323848) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q4QMY0|GPH_HAEI8 Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 33/232 (14%)
Query: 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDL- 123
T+ + + FD+DGTL + D + L E + E +L I + +P L
Sbjct: 2 NTQFKLIGFDLDGTLVNSLPDLALSVNSALAEFNLPKAPEE-----LVLTWIGNGAPVLI 56
Query: 124 -------QRHAYQTIADFE-RQGLDRL------------QIMPGTAQLCGFLDSKKIRRG 163
++ + + + E +Q +R ++ P + L K
Sbjct: 57 ARALDWAKKQTGKVLTETEVKQVTERFNFYYGENLCNVSRLYPNVKETLETLKEKGYVLA 116
Query: 164 LITRNIKEAVDLFHNRFGI--TFSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVG 220
++T V FGI FS L + P KP P PL ++C + +P +V+ VG
Sbjct: 117 VVTNKPTRHVQPVLAAFGIDHLFSEMLGGQSLPAIKPHPAPLYYLCGKFGFEPRQVLFVG 176
Query: 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
DS K+D+ AG L Y+ T+SN PD+ ++L+IL
Sbjct: 177 DS-KNDIIAAHAAGCAVVGLTYGYNYNI-PITESN--PDWVFDDFAQLLTIL 224
|
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Haemophilus influenzae (strain 86-028NP) (taxid: 281310) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|P94512|YSAA_BACSU Putative uncharacterized hydrolase YsaA OS=Bacillus subtilis (strain 168) GN=ysaA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 188 LSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYS 247
+S F KPD H ++ ++ +MVGD+L D+ RAG T ++ T
Sbjct: 179 ISGAFGKGKPDVSIFEHCLKLMNIEKDDAIMVGDNLNTDILGASRAGIKTVWINRT---- 234
Query: 248 ADDFTKSNLQPDFRVSSLTEVLSILE 273
D +++++PD+ +SSL ++ ILE
Sbjct: 235 -DKKNETDVKPDYIISSLHDLFPILE 259
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Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 280 | ||||||
| 145361638 | 245 | Haloacid dehalogenase-like hydrolase [Ar | 0.867 | 0.991 | 0.716 | 1e-106 | |
| 297823119 | 245 | hydrolase [Arabidopsis lyrata subsp. lyr | 0.867 | 0.991 | 0.712 | 1e-104 | |
| 16648738 | 224 | F25I18.1/F25I18.1 [Arabidopsis thaliana] | 0.771 | 0.964 | 0.787 | 1e-103 | |
| 359477787 | 253 | PREDICTED: putative uncharacterized hydr | 0.9 | 0.996 | 0.727 | 1e-103 | |
| 296083754 | 233 | unnamed protein product [Vitis vinifera] | 0.771 | 0.927 | 0.805 | 1e-102 | |
| 224110674 | 221 | predicted protein [Populus trichocarpa] | 0.778 | 0.986 | 0.793 | 1e-101 | |
| 255554330 | 252 | Phosphoglycolate phosphatase, putative [ | 0.853 | 0.948 | 0.703 | 1e-100 | |
| 356535460 | 247 | PREDICTED: putative uncharacterized hydr | 0.871 | 0.987 | 0.698 | 1e-96 | |
| 356576436 | 246 | PREDICTED: putative uncharacterized hydr | 0.867 | 0.987 | 0.686 | 4e-96 | |
| 357440899 | 223 | Phosphoglycolate phosphatase [Medicago t | 0.775 | 0.973 | 0.769 | 9e-96 |
| >gi|145361638|ref|NP_850204.2| Haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] gi|20196855|gb|AAM14806.1| unknown protein [Arabidopsis thaliana] gi|330253712|gb|AEC08806.1| Haloacid dehalogenase-like hydrolase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/254 (71%), Positives = 214/254 (84%), Gaps = 11/254 (4%)
Query: 29 MPLFLSKSFLFLPTRPFSSIS--NFTSYMMSSFSPPKPKTRLRGVVFDMDGTLTVPVIDF 86
M LS++F+ L RP SIS N T+ KTRLRGVVFDMDGTLTVPVIDF
Sbjct: 1 MTFLLSRTFISLTLRPSCSISMANLTT---------NAKTRLRGVVFDMDGTLTVPVIDF 51
Query: 87 PAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146
AMYRAVLGED YKR+KAE+P+GIDILHHIESWSPD Q+ AY+ IAD+E+QG+D+LQIMP
Sbjct: 52 AAMYRAVLGEDAYKRIKAESPSGIDILHHIESWSPDKQQKAYEIIADYEKQGIDKLQIMP 111
Query: 147 GTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHIC 206
GTA+LCGFLDSKKI+RGLITRN+++A+D+FH RF + FSPAL REFRPYKP+P PLLHIC
Sbjct: 112 GTAELCGFLDSKKIKRGLITRNVQKAIDIFHQRFEVIFSPALGREFRPYKPNPDPLLHIC 171
Query: 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLT 266
STW++QPNEVMMVGDSLKDD+ACGKRAGAFTCLLDETGRY DDF+ S LQPDF+V SL+
Sbjct: 172 STWDIQPNEVMMVGDSLKDDIACGKRAGAFTCLLDETGRYGPDDFSVSGLQPDFKVDSLS 231
Query: 267 EVLSILEANFDLIP 280
++ ++LE NFDL P
Sbjct: 232 KIQNLLETNFDLNP 245
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297823119|ref|XP_002879442.1| hydrolase [Arabidopsis lyrata subsp. lyrata] gi|297325281|gb|EFH55701.1| hydrolase [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/254 (71%), Positives = 210/254 (82%), Gaps = 11/254 (4%)
Query: 29 MPLFLSKSFLFLPTRPFSSIS--NFTSYMMSSFSPPKPKTRLRGVVFDMDGTLTVPVIDF 86
M LS++F+ L RP SIS N T+ K RLRGVVFDMDGTLTVPVIDF
Sbjct: 1 MTFLLSRTFISLTLRPSCSISMANLTT---------SAKARLRGVVFDMDGTLTVPVIDF 51
Query: 87 PAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146
AMYRAVLGED YKR+KAE+P+GIDILHHIESWSPD Q+ AY IAD+E+QG+D+LQIMP
Sbjct: 52 AAMYRAVLGEDAYKRIKAESPSGIDILHHIESWSPDKQQRAYDIIADYEKQGIDKLQIMP 111
Query: 147 GTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHIC 206
G AQLCGFLDSKKI+RGLITRN+++A+D+FH RF + FSPAL REFRPYKP+P PLLHIC
Sbjct: 112 GAAQLCGFLDSKKIKRGLITRNVQKAIDIFHQRFEVIFSPALGREFRPYKPNPDPLLHIC 171
Query: 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLT 266
STW++QPNEVMMVGDSLKDD+ACGKRAGAFTCLLDETGRY DDF+ S LQPDF+V SL+
Sbjct: 172 STWDIQPNEVMMVGDSLKDDIACGKRAGAFTCLLDETGRYGPDDFSVSGLQPDFKVDSLS 231
Query: 267 EVLSILEANFDLIP 280
++ +LE NFDL P
Sbjct: 232 KIQILLETNFDLNP 245
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16648738|gb|AAL25561.1| F25I18.1/F25I18.1 [Arabidopsis thaliana] gi|20147253|gb|AAM10340.1| F25I18.1/F25I18.1 [Arabidopsis thaliana] gi|20196845|gb|AAM14804.1| expressed protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 198/216 (91%)
Query: 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQ 124
KTRLRGVVFDMDGTLTVPVIDF AMYRAVLGED YKR+KAE+P+GIDILHHIESWSPD Q
Sbjct: 9 KTRLRGVVFDMDGTLTVPVIDFAAMYRAVLGEDAYKRIKAESPSGIDILHHIESWSPDKQ 68
Query: 125 RHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF 184
+ AY+ IAD+E+QG+D+LQIMPGTA+LCGFLDSKKI+RGLITRN+++A+D+FH RF + F
Sbjct: 69 QKAYEIIADYEKQGIDKLQIMPGTAELCGFLDSKKIKRGLITRNVQKAIDIFHQRFEVIF 128
Query: 185 SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
SPAL REFRPYKP+P PLLHICSTW++QPNEVMMVGDSLKDD+ACGKRAGAFTCLLDETG
Sbjct: 129 SPALGREFRPYKPNPDPLLHICSTWDIQPNEVMMVGDSLKDDIACGKRAGAFTCLLDETG 188
Query: 245 RYSADDFTKSNLQPDFRVSSLTEVLSILEANFDLIP 280
RY DDF+ S LQPDF+V SL+++ ++LE NFDL P
Sbjct: 189 RYGPDDFSVSGLQPDFKVDSLSKIQNLLETNFDLNP 224
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477787|ref|XP_002282489.2| PREDICTED: putative uncharacterized hydrolase YOR131C [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/253 (72%), Positives = 211/253 (83%), Gaps = 1/253 (0%)
Query: 29 MPLFLSKSFLFL-PTRPFSSISNFTSYMMSSFSPPKPKTRLRGVVFDMDGTLTVPVIDFP 87
M LS++ F+ P PF ++ TS S K RLRGVVFDMDGTLTVPVIDFP
Sbjct: 1 MQFVLSRAICFVHPKSPFLLMATSTSVSSVSSIAIPRKARLRGVVFDMDGTLTVPVIDFP 60
Query: 88 AMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPG 147
AMYR+VLGEDEY VKA+NPTGIDILH IE+WSP+ QR AY+TIADFERQGLDRLQIMPG
Sbjct: 61 AMYRSVLGEDEYLSVKAKNPTGIDILHQIENWSPEKQRKAYETIADFERQGLDRLQIMPG 120
Query: 148 TAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICS 207
A+L FL+SKK+RRGLITRN+K AVDLFH RFG+ FSPALSREFRPYKPDP PLLHICS
Sbjct: 121 AAELYNFLESKKMRRGLITRNVKAAVDLFHQRFGMAFSPALSREFRPYKPDPAPLLHICS 180
Query: 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267
TWEVQP EV+MVGDSLKDDV CGK+AG+FTCLLDETG+YS+DD + L+P+F+VSSLT+
Sbjct: 181 TWEVQPYEVIMVGDSLKDDVGCGKQAGSFTCLLDETGKYSSDDMASAELKPNFKVSSLTQ 240
Query: 268 VLSILEANFDLIP 280
+ S+LEANFDLIP
Sbjct: 241 LQSLLEANFDLIP 253
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296083754|emb|CBI23743.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/216 (80%), Positives = 196/216 (90%)
Query: 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQ 124
K RLRGVVFDMDGTLTVPVIDFPAMYR+VLGEDEY VKA+NPTGIDILH IE+WSP+ Q
Sbjct: 18 KARLRGVVFDMDGTLTVPVIDFPAMYRSVLGEDEYLSVKAKNPTGIDILHQIENWSPEKQ 77
Query: 125 RHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF 184
R AY+TIADFERQGLDRLQIMPG A+L FL+SKK+RRGLITRN+K AVDLFH RFG+ F
Sbjct: 78 RKAYETIADFERQGLDRLQIMPGAAELYNFLESKKMRRGLITRNVKAAVDLFHQRFGMAF 137
Query: 185 SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
SPALSREFRPYKPDP PLLHICSTWEVQP EV+MVGDSLKDDV CGK+AG+FTCLLDETG
Sbjct: 138 SPALSREFRPYKPDPAPLLHICSTWEVQPYEVIMVGDSLKDDVGCGKQAGSFTCLLDETG 197
Query: 245 RYSADDFTKSNLQPDFRVSSLTEVLSILEANFDLIP 280
+YS+DD + L+P+F+VSSLT++ S+LEANFDLIP
Sbjct: 198 KYSSDDMASAELKPNFKVSSLTQLQSLLEANFDLIP 233
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224110674|ref|XP_002315597.1| predicted protein [Populus trichocarpa] gi|222864637|gb|EEF01768.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 194/218 (88%)
Query: 63 KPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPD 122
K KTRLRGVVFDMDGTLTVPVIDF +MY+AVLGE EY+R++ ENP+GIDILH IESWSPD
Sbjct: 4 KTKTRLRGVVFDMDGTLTVPVIDFSSMYKAVLGETEYRRIRQENPSGIDILHLIESWSPD 63
Query: 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI 182
QR A + I DFER G +RLQIMPG A+LCGFLDSKKIRRGLITRN+KEAVDL+H RF I
Sbjct: 64 EQRKANEIILDFERLGRERLQIMPGAAELCGFLDSKKIRRGLITRNVKEAVDLYHQRFEI 123
Query: 183 TFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242
FSPALSREFRPYKPDP PLLHICSTW+VQPNEV+MVGDSLKDDVACGKRAGAFTCLLDE
Sbjct: 124 VFSPALSREFRPYKPDPAPLLHICSTWDVQPNEVLMVGDSLKDDVACGKRAGAFTCLLDE 183
Query: 243 TGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDLIP 280
GRY + DFT+ +L+PDF+V+SL EV S+LE NFDL+P
Sbjct: 184 KGRYGSADFTELDLEPDFKVASLAEVHSLLETNFDLMP 221
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554330|ref|XP_002518205.1| Phosphoglycolate phosphatase, putative [Ricinus communis] gi|223542801|gb|EEF44338.1| Phosphoglycolate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/263 (70%), Positives = 207/263 (78%), Gaps = 24/263 (9%)
Query: 29 MPLFLSKSFLFLPTRPFSSISNFTSYMMSSFSPP------------KPKTRLRGVVFDMD 76
MP LSKS LF +SI Y S F P K+ LRGVVFDMD
Sbjct: 1 MPSLLSKSLLF------TSI-----YSKSQFPIPHLTMSTFITTATTTKSPLRGVVFDMD 49
Query: 77 GTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFER 136
GTLTVPVIDF AMY+AVLG+DEY+R+KAEN +GIDILHHIE W+PD QR AY+TI DFER
Sbjct: 50 GTLTVPVIDFAAMYKAVLGDDEYRRIKAENSSGIDILHHIEKWTPDKQRKAYETILDFER 109
Query: 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYK 196
QGLDRLQIMPG +LCGFLDSKKIRRGLITRN+KEAVDLFH R G+ FSPALSREFRPYK
Sbjct: 110 QGLDRLQIMPGAVELCGFLDSKKIRRGLITRNVKEAVDLFHLRSGVMFSPALSREFRPYK 169
Query: 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNL 256
PDP PLLHICSTWEVQP+EV+MVGDSLKDD+ CGKRAGAFTCLLDE GRY + DF K +
Sbjct: 170 PDPAPLLHICSTWEVQPDEVIMVGDSLKDDMVCGKRAGAFTCLLDEKGRYGSSDFAKL-V 228
Query: 257 QPDFRVSSLTEVLSILEANFDLI 279
+PDF+V+SL EV S+LE NFDL+
Sbjct: 229 EPDFKVASLAEVQSLLETNFDLM 251
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535460|ref|XP_003536263.1| PREDICTED: putative uncharacterized hydrolase YOR131C-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/255 (69%), Positives = 203/255 (79%), Gaps = 11/255 (4%)
Query: 29 MPLFLS---KSFLFLPTRPFSSISNFTSYMMSSFSPPKPKTRLRGVVFDMDGTLTVPVID 85
MPL +S KSF+ L T P S MS +P KTRLRGVVFDMDGTLTVPVID
Sbjct: 1 MPLLVSNCAKSFI-LSTLP-------KSKQMSRQAPGVVKTRLRGVVFDMDGTLTVPVID 52
Query: 86 FPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIM 145
FPAMYRAVLG++EY R+KAENP+GIDIL HI+ W P QR A+ IA+ ERQGL+RLQIM
Sbjct: 53 FPAMYRAVLGDEEYLRLKAENPSGIDILGHIDGWPPHKQRKAFDAIAEVERQGLERLQIM 112
Query: 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHI 205
PG A+LC LDSKKIRRGLITRN K AVDLFH RFGITFSPALSREFRPYKPDPGPLLHI
Sbjct: 113 PGCAELCAMLDSKKIRRGLITRNTKSAVDLFHERFGITFSPALSREFRPYKPDPGPLLHI 172
Query: 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL 265
CS WEVQPNEV+M+GDSLKDDV CG++AGAFTCLLD+TG Y + ++ +PDF+V+SL
Sbjct: 173 CSLWEVQPNEVIMIGDSLKDDVPCGRQAGAFTCLLDQTGVYDSPEYADVEFKPDFKVTSL 232
Query: 266 TEVLSILEANFDLIP 280
EV S+L+ NFDL P
Sbjct: 233 DEVHSVLKENFDLSP 247
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356576436|ref|XP_003556337.1| PREDICTED: putative uncharacterized hydrolase YOR131C-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 175/255 (68%), Positives = 198/255 (77%), Gaps = 12/255 (4%)
Query: 29 MPLFLS---KSFLFLPTRPFSSISNFTSYMMSSFSPPKPKTRLRGVVFDMDGTLTVPVID 85
MPL +S K+F+ +S S P KTRLRGVVFDMDGTLTVPVID
Sbjct: 1 MPLLVSNCAKAFI---------LSTLPQSKRMSHHAPGVKTRLRGVVFDMDGTLTVPVID 51
Query: 86 FPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIM 145
FPAMYRAVLG++EY R+KAENP+GIDIL HIE W P QR AY IA+ ERQGL+RLQIM
Sbjct: 52 FPAMYRAVLGDEEYLRLKAENPSGIDILGHIEGWPPHKQRKAYDAIAEVERQGLERLQIM 111
Query: 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHI 205
PG A+LC LDSKKIRRGLITRN K AVDLFH RFGITFSPALSREFRPYKPDPGPLLHI
Sbjct: 112 PGCAELCAMLDSKKIRRGLITRNTKSAVDLFHERFGITFSPALSREFRPYKPDPGPLLHI 171
Query: 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL 265
CS WEVQPNEV+M+GDSLKDDV CG++AGAFTCLLD+TG Y + + +PDF+V+SL
Sbjct: 172 CSLWEVQPNEVIMIGDSLKDDVRCGRQAGAFTCLLDQTGVYDSPKYADVEFKPDFKVTSL 231
Query: 266 TEVLSILEANFDLIP 280
EV S+L+ NFDL P
Sbjct: 232 DEVHSVLKENFDLSP 246
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357440899|ref|XP_003590727.1| Phosphoglycolate phosphatase [Medicago truncatula] gi|355479775|gb|AES60978.1| Phosphoglycolate phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 184/217 (84%)
Query: 64 PKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDL 123
PKTRLRGVVFDMDGTLTVPVIDFP+MY+AVLG+DEY RVKA NP GIDIL I+ WSP
Sbjct: 7 PKTRLRGVVFDMDGTLTVPVIDFPSMYKAVLGDDEYLRVKASNPVGIDILKLIDHWSPLQ 66
Query: 124 QRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183
QR AY TIA FE+Q LD LQIMPG A LC LDSKKIRRGLITRN+K AVDLFH RFGIT
Sbjct: 67 QRQAYDTIAHFEKQALDHLQIMPGAADLCNVLDSKKIRRGLITRNMKSAVDLFHQRFGIT 126
Query: 184 FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDET 243
FSPALSREFRPYKPDP PLLHICS WEVQPNEV+MVGDSLKDD+ACG RAGA TCLLD+T
Sbjct: 127 FSPALSREFRPYKPDPAPLLHICSLWEVQPNEVIMVGDSLKDDIACGGRAGAHTCLLDQT 186
Query: 244 GRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDLIP 280
GRY + ++ + +PDF+V+SL EV SILE NF+L P
Sbjct: 187 GRYDSPEYANVDFKPDFKVTSLAEVYSILETNFELSP 223
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 280 | ||||||
| TAIR|locus:505006285 | 245 | AT2G33255 [Arabidopsis thalian | 0.853 | 0.975 | 0.729 | 1.2e-95 | |
| SGD|S000005657 | 218 | YOR131C "Putative haloacid deh | 0.689 | 0.885 | 0.344 | 1.4e-23 | |
| TIGR_CMR|GSU_0694 | 214 | GSU_0694 "HAD-superfamily hydr | 0.657 | 0.859 | 0.325 | 7.2e-20 | |
| DICTYBASE|DDB_G0269888 | 269 | DDB_G0269888 "Putative unchara | 0.692 | 0.721 | 0.287 | 1.1e-16 | |
| TIGR_CMR|SO_4039 | 202 | SO_4039 "hydrolase, haloacid d | 0.575 | 0.797 | 0.308 | 6e-16 | |
| TIGR_CMR|CPS_0523 | 203 | CPS_0523 "hydrolase, HAD-famil | 0.692 | 0.955 | 0.294 | 9.8e-16 | |
| TIGR_CMR|CHY_1358 | 212 | CHY_1358 "HAD-superfamily hydr | 0.703 | 0.929 | 0.257 | 9.7e-09 | |
| TIGR_CMR|CBU_0349 | 227 | CBU_0349 "phosphoglycolate pho | 0.742 | 0.916 | 0.257 | 2.9e-06 | |
| UNIPROTKB|Q9KLY3 | 224 | VC_A0608 "Putative uncharacter | 0.575 | 0.718 | 0.279 | 2.6e-05 | |
| TIGR_CMR|VC_A0608 | 224 | VC_A0608 "conserved hypothetic | 0.575 | 0.718 | 0.279 | 2.6e-05 |
| TAIR|locus:505006285 AT2G33255 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 175/240 (72%), Positives = 208/240 (86%)
Query: 42 TRPFSSISNFTSYMMSSFS-PPKPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYK 100
+R F S++ S +S + KTRLRGVVFDMDGTLTVPVIDF AMYRAVLGED YK
Sbjct: 6 SRTFISLTLRPSCSISMANLTTNAKTRLRGVVFDMDGTLTVPVIDFAAMYRAVLGEDAYK 65
Query: 101 RVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKI 160
R+KAE+P+GIDILHHIESWSPD Q+ AY+ IAD+E+QG+D+LQIMPGTA+LCGFLDSKKI
Sbjct: 66 RIKAESPSGIDILHHIESWSPDKQQKAYEIIADYEKQGIDKLQIMPGTAELCGFLDSKKI 125
Query: 161 RRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220
+RGLITRN+++A+D+FH RF + FSPAL REFRPYKP+P PLLHICSTW++QPNEVMMVG
Sbjct: 126 KRGLITRNVQKAIDIFHQRFEVIFSPALGREFRPYKPNPDPLLHICSTWDIQPNEVMMVG 185
Query: 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDLIP 280
DSLKDD+ACGKRAGAFTCLLDETGRY DDF+ S LQPDF+V SL+++ ++LE NFDL P
Sbjct: 186 DSLKDDIACGKRAGAFTCLLDETGRYGPDDFSVSGLQPDFKVDSLSKIQNLLETNFDLNP 245
|
|
| SGD|S000005657 YOR131C "Putative haloacid dehalogenase-like hydrolase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 73/212 (34%), Positives = 110/212 (51%)
Query: 68 LRGVVFDMDGTLTVPVI-DFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR- 125
++ VVFDMDGTL +P FPAM A+ ED+ IDILH I++ + ++
Sbjct: 13 IKAVVFDMDGTLCLPQPWMFPAMRNAIGLEDK----------SIDILHFIDTLPTEKEKK 62
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-- 183
A+ I E + + +Q PG + +L I + + TRN+ V+ F RF +
Sbjct: 63 EAHDRIELVEAKAMKEMQPQPGLVDIMRYLTKNGISKNICTRNVGAPVETFVKRFIPSEL 122
Query: 184 --FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
F ++REFRP KP P PLLHI S ++P E++MVGDS DD+ G+ AG FT LL
Sbjct: 123 SRFDYIVTREFRPTKPQPDPLLHIASKLNIRPLEMIMVGDSF-DDMKSGRSAGCFTVLLK 181
Query: 242 ETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ + D V L+E++ +++
Sbjct: 182 N--HVNGHLLLEHKELVDVSVEDLSEIIELIQ 211
|
|
| TIGR_CMR|GSU_0694 GSU_0694 "HAD-superfamily hydrolase, subfamily IA, variant 1" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 67/206 (32%), Positives = 101/206 (49%)
Query: 72 VFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTI 131
+FDMDGTLT PV DF A+ RA LG P G DIL H+++ R + +
Sbjct: 21 IFDMDGTLTEPVHDFAAI-RAALGV----------PAGCDILGHLDTLPEGESRRLHGLL 69
Query: 132 ADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI-TFSPA--- 187
+ E + R + G +L LD + +R G++TRN ++ G+ ++ PA
Sbjct: 70 DEIEIELAGRAEASAGARRLVQALDRRGVRMGIVTRNTRQVALRVLEHIGVGSYFPAGSI 129
Query: 188 LSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYS 247
L R KP+P +L + ++W +MVGD L D + CG+ AGA T +D T +
Sbjct: 130 LGRHDALPKPEPDGILRLAASWGTTGRSAVMVGDYLFD-LQCGRSAGALTVHVDRTRAFR 188
Query: 248 ADDFTKSNLQPDFRVSSLTEVLSILE 273
FT D V+SL E+ ++E
Sbjct: 189 WPQFT------DLAVASLEELAELVE 208
|
|
| DICTYBASE|DDB_G0269888 DDB_G0269888 "Putative uncharacterized hydrolase YOR131C" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 65/226 (28%), Positives = 108/226 (47%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRH 126
++R ++FD+DGTL DF + K + EN IDIL I +S + +
Sbjct: 9 KVRAIIFDLDGTLLTGT-DFKLLR---------KELNLENFAKIDILEIINGYSIEEKEK 58
Query: 127 AYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLF-HNRFG--IT 183
A + I DFE + +++Q+ +L FL+ I + + +RN E + F + R
Sbjct: 59 ANKIIYDFELRARNQIQLQDNVEELLEFLEINNIPKAIHSRNSLENIQHFVYQRLSKPYR 118
Query: 184 FSPALSREFRPYKPDPGPLLHICSTWE----------VQPNEVMMVGDSLKDDVACGKRA 233
F + RE P KP+P L I + ++P+E++ VGDS+ DD+ K
Sbjct: 119 FHHLVGREIEPPKPNPSGSLDILRVFNESFIKQNQSIIKPDEILFVGDSI-DDITTSKNF 177
Query: 234 GAFTCLLDETGRYSADDFTKSNLQP-DFRVSSLTEVLSILEANFDL 278
G+ + LL +D K + Q D+ +S+ TE++ IL N +L
Sbjct: 178 GSISMLL-------LNDHNKHHSQSADYSISNFTELIQILNLNLNL 216
|
|
| TIGR_CMR|SO_4039 SO_4039 "hydrolase, haloacid dehalogenase-like family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR- 125
++RGV+FD+DGTL DF + RA LG +G DIL HI S + +
Sbjct: 12 QIRGVIFDLDGTLAHSNPDFKGL-RAALGIG----------SGTDILEHIHSLETTVAKM 60
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS 185
A + + D+E + + + G L FL ++++ ++TRN+ EA + + GI
Sbjct: 61 QALEIVHDYELESSRQASWIEGAQALIAFLKTRQLPLAILTRNMPEAAKITIEKLGIDIP 120
Query: 186 PALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL 240
L+R KP P + IC W++ P +++ VGD L D + + AG+ C L
Sbjct: 121 LVLTRYDAEPKPHPQGIYLICEQWQLNPADILYVGDYLFD-LQTAQNAGS-RCAL 173
|
|
| TIGR_CMR|CPS_0523 CPS_0523 "hydrolase, HAD-family protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR- 125
+L GV+FD+D TL ++F + +A LG ++N ID+L+ ++S P QR
Sbjct: 5 KLLGVIFDLDNTLVSSSLNFDNIRKA-LG-------CSKN---IDLLNFVDSL-PKQQRI 52
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS 185
A+Q + D+E + + GT +L L I ++TRN K+A + N I
Sbjct: 53 DAHQVLVDYEINDANSASKLAGTDELLALLSKLSIPCAIVTRNCKQAALIKLNNNNIDVP 112
Query: 186 PALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGR 245
L+RE KP P LLH+ W P ++ VGD L D + + A +CL+
Sbjct: 113 ILLTREDHKAKPAPDALLHLAQYWNTPPENLLYVGDYLYD-LQAAQNANTMSCLVT---- 167
Query: 246 YSADDFTKSNLQPDFRVSSLTEVLSILEANFDLI 279
Y A + + L D V L+E+ +++ N ++
Sbjct: 168 Y-AKALSYAGLA-DIVVDDLSELCDVIKQNMRVL 199
|
|
| TIGR_CMR|CHY_1358 CHY_1358 "HAD-superfamily hydrolase, subfamily IA" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 145 (56.1 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 68 LRGVVFDMDGTL--TVPVI--DFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDL 123
++ V FD+DGTL T +I F +Y+ L +D R + G +++ E+ P+
Sbjct: 2 IKAVFFDLDGTLLDTFDLIYESFKHVYKNFLNKD-ITREEIYPYFGKPLIYSFENLDPET 60
Query: 124 QRHAYQTIADFERQGLDRL-QIMPGTAQLCGFLDSKKIRRGLITRNIKEA----VDLFH- 177
+F Q D++ + PG + L + +IT +K + LF+
Sbjct: 61 IDQVIAAYREFNLQHHDQMVKPFPGAKETLKKLKQRGKILAVITSKVKSTAIRGLKLFNL 120
Query: 178 NRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237
+R+ AL + +KPDP P+L+ ++++P + +MVGDS D V+ +RAG T
Sbjct: 121 DRY-FDLVVALE-DTEKHKPDPAPVLYALKFFQLKPEQCLMVGDSPHDMVSA-QRAGVKT 177
Query: 238 CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271
+ + +D K+ +P++ ++S ++L I
Sbjct: 178 AAV-KWSVLPWEDLVKT--KPNYILNSFDDLLKI 208
|
|
| TIGR_CMR|CBU_0349 CBU_0349 "phosphoglycolate phosphatase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 58/225 (25%), Positives = 94/225 (41%)
Query: 64 PKTRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEYKRVKAENPT---GI-DILHH- 115
P R+ V FD+DGTL D +L G D +K PT G IL +
Sbjct: 4 PTHRVTAVFFDLDGTLLDTAPDLADALNQLLNKHGRDPLP-LKVIRPTVAQGTRGILANG 62
Query: 116 --IESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV 173
I P + ++ ++ ++ G A++ +LD I G++T
Sbjct: 63 FSINQTDPRFNPLRDEFLSIYQSCLTNKTTYFDGMAEVLEYLDVHAIPWGVVTNKPGWLA 122
Query: 174 DLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230
N F +T + +S + KP P PLL C T +VQP+ + VGD+ + D+
Sbjct: 123 RPLLNHFKLTRRYRCLISGDQLANRKPHPEPLLFACKTVDVQPHTALYVGDT-EGDIQAA 181
Query: 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275
K AG + T Y + + T + + D + S E++ L+ N
Sbjct: 182 KAAGMLA--VAATYGYLSANSTPQDWKADALIKSPLELIDWLKGN 224
|
|
| UNIPROTKB|Q9KLY3 VC_A0608 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 48/172 (27%), Positives = 69/172 (40%)
Query: 108 TGIDILH-HIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT 166
T + H W+ L + + F + D ++PG +L L K R G+IT
Sbjct: 59 TAAQLKHTRFAGWAEKLNTTTDELNSAFLQAMADICTLLPGAMELMQALQGKA-RLGIIT 117
Query: 167 RNIKEAVDLFHNRFGIT--FSP-ALSREFRPYKPDPGPLLHICSTW-EVQPNEVMMVGDS 222
E D+ + G+T F +S E KPD G H + V+MVGD+
Sbjct: 118 NGFTELQDVRLAKTGMTDFFDQIVISEEVGIAKPDAGIFAHALERMGNPTKSRVLMVGDN 177
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
D+ G G TC L+ D T P + V+SL E+ IL A
Sbjct: 178 PHSDILGGLNFGIETCWLNVHQHPKPDGIT-----PHYEVTSLHELREILLA 224
|
|
| TIGR_CMR|VC_A0608 VC_A0608 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 48/172 (27%), Positives = 69/172 (40%)
Query: 108 TGIDILH-HIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT 166
T + H W+ L + + F + D ++PG +L L K R G+IT
Sbjct: 59 TAAQLKHTRFAGWAEKLNTTTDELNSAFLQAMADICTLLPGAMELMQALQGKA-RLGIIT 117
Query: 167 RNIKEAVDLFHNRFGIT--FSP-ALSREFRPYKPDPGPLLHICSTW-EVQPNEVMMVGDS 222
E D+ + G+T F +S E KPD G H + V+MVGD+
Sbjct: 118 NGFTELQDVRLAKTGMTDFFDQIVISEEVGIAKPDAGIFAHALERMGNPTKSRVLMVGDN 177
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
D+ G G TC L+ D T P + V+SL E+ IL A
Sbjct: 178 PHSDILGGLNFGIETCWLNVHQHPKPDGIT-----PHYEVTSLHELREILLA 224
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 280 | |||
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 2e-20 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-18 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 6e-18 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 5e-16 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 1e-12 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 2e-12 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 2e-11 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 5e-10 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 7e-09 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 7e-09 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 4e-08 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-07 | |
| PRK09449 | 224 | PRK09449, PRK09449, dUMP phosphatase; Provisional | 4e-07 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 8e-07 | |
| TIGR01458 | 257 | TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam | 4e-06 | |
| PLN02645 | 311 | PLN02645, PLN02645, phosphoglycolate phosphatase | 9e-06 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 1e-05 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-05 | |
| PRK13225 | 273 | PRK13225, PRK13225, phosphoglycolate phosphatase; | 3e-05 | |
| TIGR01656 | 147 | TIGR01656, Histidinol-ppas, histidinol-phosphate p | 9e-05 | |
| TIGR01452 | 279 | TIGR01452, PGP_euk, phosphoglycolate/pyridoxal pho | 9e-05 | |
| TIGR02254 | 224 | TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I | 4e-04 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 4e-04 | |
| TIGR01548 | 197 | TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase s | 6e-04 | |
| COG2179 | 175 | COG2179, COG2179, Predicted hydrolase of the HAD s | 8e-04 | |
| TIGR01662 | 132 | TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, | 0.003 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.003 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 0.004 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 0.004 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 2e-20
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 17/221 (7%)
Query: 66 TRLRGVVFDMDGTLTVPVIDF---PAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPD 122
++ ++FD+DGTL D A LG + G+ + IE +
Sbjct: 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGE 61
Query: 123 LQRHAYQTIAD-----FERQGLDRLQI--MPGTAQLCGFLDSKKIRRGLITRNIKEAVDL 175
A + + F + L+ PG +L L S + G++T + +D+
Sbjct: 62 ADEEAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDI 121
Query: 176 FHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKR 232
G+ F + + P KPDP PLL + + P E +MVGDSL +D+ K
Sbjct: 122 LLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSL-NDILAAKA 180
Query: 233 AGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
AG + G S ++ + D + SL E+L++L
Sbjct: 181 AGVPAVGVT-WGYNSREEL--AQAGADVVIDSLAELLALLA 218
|
Length = 220 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 80.0 bits (197), Expect = 3e-18
Identities = 41/190 (21%), Positives = 58/190 (30%), Gaps = 26/190 (13%)
Query: 68 LRGVVFDMDGTLT--VPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR 125
++ VVFD+DGTLT PV+ V A E L
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAA--GENLTKEGREELVRRLLL 58
Query: 126 HAYQTIADFER------------------QGLDRLQIMPGTAQLCGFLDSKKIRRGLITR 167
A E + PG + L I+ ++T
Sbjct: 59 RALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTG 118
Query: 168 NIKEAVDLFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224
+ + + G+ S L KPDP V+P EV+MVGD +
Sbjct: 119 DNRLTANAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVN 178
Query: 225 DDVACGKRAG 234
D+ K AG
Sbjct: 179 -DIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 6e-18
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 27/177 (15%)
Query: 70 GVVFDMDGTLTVPVIDFPAMYRAVLGED---------EYKRVKAENPTGIDILHHIESWS 120
++FD+DGTL +D R + +KR+KA ++L I + +
Sbjct: 1 AILFDIDGTL----VDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEA 56
Query: 121 PD-LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLF--H 177
+ LQ H + PG A L L I+ G+I+ A L
Sbjct: 57 LEELQGHIGYDAEEAYI---------PGAADLLPRLKEAGIKLGIISNGSLRAQKLLLRK 107
Query: 178 NRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG 234
+ G F L + KP+P L + V P EV+ VGD+L D+ + AG
Sbjct: 108 HGLGDYFELILGSDEIGSKPEPEIFLAALESLGVPP-EVLHVGDNL-SDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 5e-16
Identities = 49/230 (21%), Positives = 87/230 (37%), Gaps = 33/230 (14%)
Query: 66 TRLRGVVFDMDGTL--TVP----VID--FPAMYRAVLGEDEYKRVKAENPTGIDIL---- 113
+R V FD+DGTL + P ++ A+ GE+ RV+ G D+L
Sbjct: 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEE---RVRTWVGNGADVLVERA 60
Query: 114 --HHIESWSPDLQRHAYQTIADFERQGLDRL-QIMPGTAQLCGFLDSKKIRRGLIT---- 166
+L + + + ++ PG + L + ++T
Sbjct: 61 LTWAGREPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPT 120
Query: 167 ---RNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSL 223
+ EA+ + F + S + KPDP PLL C + P E++ VGDS
Sbjct: 121 PFVAPLLEALGIAD-YFSVVIGGD-SLPNK--KPDPAPLLLACEKLGLDPEEMLFVGDS- 175
Query: 224 KDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
++D+ + AG + + Y + +PD + E+L +L
Sbjct: 176 RNDIQAARAAGCPSVGVTYGYNYGEP---IALSEPDVVIDHFAELLPLLG 222
|
Length = 226 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 1e-12
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+PG L V P E +M+GDS D+ + AG T L+ TG +A+D ++
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSD-TDILAARAAGIRTILVL-TGVTTAEDLERAP 61
Query: 256 LQPDFRVSSLTE 267
+PD+ V SL +
Sbjct: 62 GRPDYVVDSLAD 73
|
Length = 74 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 2e-12
Identities = 57/242 (23%), Positives = 92/242 (38%), Gaps = 48/242 (19%)
Query: 67 RLRGVVFDMDGTLTVPVIDF-PAMYRAVLGEDEYKRVK----------------AENPTG 109
++ ++FD+DGTL +DF A +RAVL E V A G
Sbjct: 3 MIKAILFDLDGTL----LDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRG 58
Query: 110 IDILHHIESWSPDLQRHAYQTIADFE---RQGLDRL-QIMPGTAQLCGFLDS--KKIRRG 163
+ + L+ + + L L +++P + L KK + G
Sbjct: 59 EYTGEYGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLG 118
Query: 164 LIT---RNIKEAV-------DLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQP 213
++T R +E D F + S + KPDP + V P
Sbjct: 119 ILTNGARPHQERKLRQLGLLDYFD---AVFISE----DVGVAKPDPEIFEYALEKLGVPP 171
Query: 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
E + VGDSL++D+ + G T ++ G+ D PD+ +SSL E+L +LE
Sbjct: 172 EEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALE----APDYEISSLAELLDLLE 227
Query: 274 AN 275
Sbjct: 228 RL 229
|
Length = 229 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 2e-11
Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 28/228 (12%)
Query: 67 RLRGVVFDMDGTLTVPVIDF-PAMYRA----------VLGEDEYKRVKAENPTGID---- 111
++ V+FDMDGTL +D P RA + ++E + + I
Sbjct: 1 MIKAVIFDMDGTL----VDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLR 56
Query: 112 ILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKE 171
L E + + + + E L+ L+ +PG +L L ++ I + + + +
Sbjct: 57 KLAAGEDPADLAELERL--LYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRR 114
Query: 172 AVDLFHNRFGIT--FSPALSREFRPY-KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228
A + R G+ F ++ + KP P L V P E ++V DS +
Sbjct: 115 AAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPA-GIQ 173
Query: 229 CGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275
K AG + R D D + L E+ ++LEA
Sbjct: 174 AAKAAGMRVVGVPAGHDRPHLDPLD--AHGADTVLLDLAELPALLEAR 219
|
Length = 221 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 5e-10
Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 26/186 (13%)
Query: 71 VVFDMDGTLTVPVIDF----PAMYRAVLGEDEYKRVKAE------NPTGIDILHHIESWS 120
++FD+DGTL IDF R + E + AE + L +
Sbjct: 1 IIFDLDGTL----IDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREH 56
Query: 121 PDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDL----- 175
P + + ++ RL+ P +L L +K ++ +++ +EAV+
Sbjct: 57 PIDPDEILEALLEYN--LESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114
Query: 176 -FHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG 234
+ F F+ S + KPDP + + P E++ + DS + D+ + AG
Sbjct: 115 GLLDLFDAVFT---SDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPE-DLEAARAAG 170
Query: 235 AFTCLL 240
T +
Sbjct: 171 IKTVHV 176
|
Length = 176 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 7e-09
Identities = 61/218 (27%), Positives = 87/218 (39%), Gaps = 21/218 (9%)
Query: 71 VVFDMDGTLTVPVIDFPAMYRAVLGEDE-----YKRVKAENPTGIDIL-HHIESWS---P 121
V+FD+DGTL D A L RV G+ +L + +W+ P
Sbjct: 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEP 60
Query: 122 DLQRHAYQTIADFER---QGLDRL-QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH 177
D QR A + F+R + L + PG G L +K +R GL+T
Sbjct: 61 DAQRVA-ELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLL 119
Query: 178 NRFGIT--FSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG 234
G+ FS + + KP P PLL V P +++ VGDS + D+ + AG
Sbjct: 120 ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDS-RVDIQAARAAG 178
Query: 235 AFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
+ LL RY L PD SL E+ +L
Sbjct: 179 CPSVLLTYGYRYGE---AIDLLPPDVLYDSLNELPPLL 213
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 7e-09
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK-S 254
KPDP P+L +P E +MVGD+ D+ GK AG T + ++
Sbjct: 138 KPDPEPVLKALELLGAKPEEALMVGDN-HHDILAGKNAGTKTAGV----AWTIKGREYLE 192
Query: 255 NLQPDFRVSSLTEVLSILEANF 276
+PDF + ++++L+I+
Sbjct: 193 QYKPDFMLDKMSDLLAIVGDMN 214
|
Length = 214 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 4e-08
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 130 TIADFER--QGLDRLQIMPGTAQLCGFLDSKKIRRGLIT-RNIKEAVDLFHN-----RFG 181
T+ D E ++ L++ PG + L K I+ L T ++ +E ++L F
Sbjct: 9 TLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD 68
Query: 182 ITFSPALSREFRPY-------------KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228
+ + + P KP+P LL V P EV+MVGDSL +D+
Sbjct: 69 PVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIE 127
Query: 229 CGKRAGAFTCL 239
K AG
Sbjct: 128 MAKAAGGLGVA 138
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 5/131 (3%)
Query: 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPY-KPD 198
L++ PG L R G+IT + R G+ F ++ E KP
Sbjct: 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPH 152
Query: 199 PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQP 258
P V+P E +MVGD L D+ K G T +++ S+ P
Sbjct: 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK--SSKMEDDVYPYP 210
Query: 259 DFRVSSLTEVL 269
D+ +SSL E+L
Sbjct: 211 DYEISSLRELL 221
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|181865 PRK09449, PRK09449, dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 4e-07
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 196 KPDPGPLLHICSTWEVQPNE-VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKS 254
KPD + V+MVGD+L D+ G AG TC L+ GR +
Sbjct: 150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEG---- 205
Query: 255 NLQPDFRVSSLTEVLSILEA 274
+ P ++VSSL+E+ +L
Sbjct: 206 -IAPTYQVSSLSELEQLLCK 224
|
Length = 224 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 8e-07
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP P + +EV+MVGD L D+ K AG LL TG SA+D ++
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAG-LDTLLVLTGVSSAEDLDRAE 248
Query: 256 LQPDFRVSSLTEVLSILEANF 276
++P + V SL E+++ L+
Sbjct: 249 VKPTYVVDSLAELITALKELV 269
|
Length = 269 |
| >gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 4e-06
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDV----ACGKRAGAFTCLLDETGRYSADDF 251
KP L +P E +M+GD +DDV CG R + TG+Y D
Sbjct: 179 KPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRG-----IQVRTGKYRPSDE 233
Query: 252 TKSNLQPDFRVSSLTEVLSIL 272
K N+ PD SL + ++
Sbjct: 234 EKINVPPDLTCDSLPHAVDLI 254
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257 |
| >gnl|CDD|178251 PLN02645, PLN02645, phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 9e-06
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL-----DETGRYSADD 250
KP + ++ + + ++ +++ MVGD L D+ G+ G T L+ E+ S ++
Sbjct: 230 KPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPEN 289
Query: 251 FTKSNLQPDFRVSSLTEVLSILEA 274
+QPDF S +++ L++ A
Sbjct: 290 ----KIQPDFYTSKISDFLTLKAA 309
|
Length = 311 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 55/201 (27%), Positives = 79/201 (39%), Gaps = 29/201 (14%)
Query: 56 MSSFSPPKPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHH 115
MS F P R V+FD+DGTL V D A +L E P G++ + H
Sbjct: 1 MSGFEQLFPGRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLE------LGRPPAGLEAVRH 54
Query: 116 -IESWSPDLQRHA------YQTIADFE-RQGLDRLQ-----------IMPGTAQLCGFLD 156
+ + +P L R A + + D Q L + PG +L
Sbjct: 55 WVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLK 114
Query: 157 SKKIRRGLITRNIKEAVD--LFHNRFGITFSPALSREFRPY-KPDPGPLLHICSTWEVQP 213
+ + LIT + V L + G F + + P KPDP LL + V P
Sbjct: 115 KQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPP 174
Query: 214 NEVMMVGDSLKDDVACGKRAG 234
++ + VGDS + DV K AG
Sbjct: 175 SQSLFVGDS-RSDVLAAKAAG 194
|
Length = 272 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 20/170 (11%)
Query: 71 VVFDMDGTLTVP-VIDFPAMYRAVLGEDEYKRVKAENPTG-IDILHHIESWSPDLQRHAY 128
VFD+DGTL +ID A R +E + G +D + L+
Sbjct: 8 AVFDLDGTLINAELIDELA--RGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPV 65
Query: 129 QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSP 186
+ + + + L++ PG +L L + + +I+ V+ R GI +
Sbjct: 66 EVLEEVREE---FLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN 122
Query: 187 ALSREFRPYKPDP-GP----------LLHICSTWEVQPNEVMMVGDSLKD 225
L + GP L + + + E + GDS D
Sbjct: 123 ELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSAND 172
|
Length = 212 |
| >gnl|CDD|106187 PRK13225, PRK13225, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 3e-05
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 12/186 (6%)
Query: 48 ISNFTSYMMSSFSPPKPKTRLRGVVFDMDGTL--TVPVI------DFPAMYRAVLGEDEY 99
+ F++ F P+T L+ ++FD DGTL ++P + P + E +Y
Sbjct: 43 LKGFSTRNPQVFPQSYPQT-LQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDY 101
Query: 100 KRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKK 159
+++ + I + W Q Q + L LQ+ PG A L L S+
Sbjct: 102 AQLRQWSSRTIVRRAGLSPWQ---QARLLQRVQRQLGDCLPALQLFPGVADLLAQLRSRS 158
Query: 160 IRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219
+ G+++ N ++ ++ F R G+ ++ + P L + + QP VM V
Sbjct: 159 LCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYV 218
Query: 220 GDSLKD 225
GD +D
Sbjct: 219 GDETRD 224
|
Length = 273 |
| >gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 9e-05
Identities = 33/142 (23%), Positives = 49/142 (34%), Gaps = 35/142 (24%)
Query: 129 QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIR-----------RGLITRNIKEAVDLFH 177
T++D+ R LD Q+ PG L + RG + EA +
Sbjct: 14 DTVSDYPRS-LDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFS---AEAFRAPN 69
Query: 178 NRF-------GITFSPALSREFRPY---------KPDPGPLLHICSTWEVQPNEVMMVGD 221
R G+ L F P+ KP PG +L V + ++VGD
Sbjct: 70 GRVLELLRQLGVAVDGVL---FCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGD 126
Query: 222 SLKDDVACGKRAGAFTCLLDET 243
L D+ + AG LL +
Sbjct: 127 RL-RDLQAARNAGLAAVLLVDG 147
|
This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147 |
| >gnl|CDD|233420 TIGR01452, PGP_euk, phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 9e-05
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL-------LDETGRYSA 248
KP P I + + P +MVGD L+ D+ G R G T L L+E Y A
Sbjct: 202 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLA 261
Query: 249 DDFTKSNLQPDFRVSSL 265
+ +L PD+ V SL
Sbjct: 262 AG--QHDLVPDYVVESL 276
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In mammals, PGP is found in many tissues, notably in red blood cells where P-glycolate is and important activator of the hydrolysis of 2,3-bisphosphoglycerate, a major modifier of the oxygen affinity of hemoglobin. Pyridoxal phosphate (PLP, Vitamin B6) phosphatase is involved in the degradation of PLP in mammals and is widely distributed in human tissues including erythrocyes. The enzymes described here are members of the Haloacid dehalogenase superfamily of hydrolase enzymes (pfam00702). Unlike the bacterial PGP equivalog (TIGR01449), which is a member of class (subfamily) I, these enzymes are members of class (subfamily) II. These two families have almost certainly arisen from convergent evolution (although these two ancestors may themselves have diverged from a more distant HAD superfamily progenitor). The primary seed sequence for this model comes from Chlamydomonas reinhardtii, a photosynthetic alga. The enzyme has been purified and characterized and these data are fully consistent with the assignment of function as a PGPase involved in photorespiration. The second seed, from Homo sapiens chromosome 22 has been characterized as a pyridoxal phosphatase. Biochemical characterization of partially purified PGP's from various tissues including red blood cells have been performed while one gene for PGP has been localized to chromosome 16p13.3. The sequence used here maps to chromosome 22. There is indeed a related gene on chromosome 16 (and it is expressed, since EST's are found) which shows 46% identity and 59% positives by BLAST2 (E=1e-66). The chromosome 16 gene is not in evidence in nraa but translated from the genomic sequence would score 372.4 (E=7.9e-113) versus This model, well above trusted. The third seed, from C. elegans, is only supported by sequence similarity. This model is limited to eukaryotic species including S. pombe and S. cerevisiae, although several archaea score between the trusted and noise cutoffs. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase d. Length = 279 |
| >gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 4e-04
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 128 YQTIADFERQGLDRLQIMPGTAQLC-GFLD-----SKKIRRGLITRNIKEAVDLFHNRFG 181
Y T AD L+ + QL G + +K R ++T ++E + G
Sbjct: 75 YNTEADEALLNQKYLRFLEEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSG 134
Query: 182 IT--FSPAL-SREFRPYKPDPGPLLHICS-TWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237
+ F S + KPD + + EV+M+GDSL D+ G+ AG T
Sbjct: 135 LFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDT 194
Query: 238 CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
C ++ + DD P + + SL E+ IL
Sbjct: 195 CWMNPDMHPNPDDII-----PTYEIRSLEELYEIL 224
|
This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 4e-04
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 46/189 (24%)
Query: 71 VVFDMDGTL----TVPVIDFPAMYRAVLGE-----DEYKRVKAENPTGIDILHHIESWSP 121
VVFD+DG L V F YR V+G+ +EY+R H+ + P
Sbjct: 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRR-------------HLGRYFP 47
Query: 122 DLQR---HAYQTIADFERQG---LDRLQIMPGTAQLCGFLDSKKIRRGLIT-------RN 168
D+ R + F R+ +++ PG +L L + + + T R+
Sbjct: 48 DIMRIMGLPLEMEEPFVRESYRLAGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARS 107
Query: 169 IKEAV---DLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKD 225
+ EA+ LF + G S E KP P + +V P + +MVGD++
Sbjct: 108 LLEALGLLPLFDHVIG-------SDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVT- 159
Query: 226 DVACGKRAG 234
D+A + AG
Sbjct: 160 DLASARAAG 168
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|233462 TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 6e-04
Identities = 46/201 (22%), Positives = 67/201 (33%), Gaps = 44/201 (21%)
Query: 71 VVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILH---------------- 114
+V DMDG + D YR + D + + T DI H
Sbjct: 3 LVLDMDGVM----ADVSQSYRRAII-DTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHR 57
Query: 115 ----HIESWSPDLQRHA--YQTIADFERQ-----GLDRLQIMPGTAQLCGFLDSKKIRRG 163
+ S S + R A + + + G R G + L K + R
Sbjct: 58 LVVDGLNSASSERVRDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRE 117
Query: 164 LITRNIKEAV---------DLFHNRFG--ITFSPALSREFRPYKPDPGPLLHICSTWEVQ 212
L AV F G I F + E P KP+P PL+ V+
Sbjct: 118 LHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVE 177
Query: 213 PNEVMMVGDSLKDDVACGKRA 233
MVGD++ DD+ G++A
Sbjct: 178 ACHAAMVGDTV-DDIITGRKA 197
|
This model represents a small and phylogenetically curious clade of sequences. Sequences are found from Halobacterium (an archaeon), Nostoc and Synechococcus (cyanobacteria) and Phytophthora (a stramenophile eukaryote). These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs. The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. Length = 197 |
| >gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 8e-04
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 164 LITRNIKEA-VDLFHNRFGITF-SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGD 221
++ N KE+ V + G+ F A KP + P EV+MVGD
Sbjct: 66 VVVSNNKESRVARAAEKLGVPFIYRAK-------KPFGRAFRRALKEMNLPPEEVVMVGD 118
Query: 222 SLKDDVACGKRAGAFTCL 239
L DV G RAG T L
Sbjct: 119 QLFTDVLGGNRAGMRTIL 136
|
Length = 175 |
| >gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Score = 36.6 bits (85), Expect = 0.003
Identities = 40/175 (22%), Positives = 59/175 (33%), Gaps = 46/175 (26%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAY 128
+GVV D+DGTLT V Y + E + + +L+ Y
Sbjct: 1 KGVVLDLDGTLTDDVP--------------YVDDEDE----RILYPEVPDALAELKEAGY 42
Query: 129 QTIADFERQ-GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPA 187
+ + Q G+ R G S ++ R L E + + +
Sbjct: 43 K-VVIVTNQSGIGR-----------GKFSSGRVARRL------EELGVPIDILYAC---- 80
Query: 188 LSREFRPYKPDPGPLLHICS-TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
R KP PG L E+ P E + VGD D+ KRAG L+
Sbjct: 81 --PHCR--KPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.003
Identities = 45/212 (21%), Positives = 67/212 (31%), Gaps = 56/212 (26%)
Query: 56 MSSFSPPKPKTRLRGVVFDMDGTLT-VPVIDFPAMY------------RAVLGEDEYK-- 100
S SP +L VVFDMD TL ID A RA+ GE ++K
Sbjct: 4 HSELSPLLRSKKL--VVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKAS 61
Query: 101 ---RVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDS 157
RV +++L + + L + G +L L
Sbjct: 62 LRERVALLKGLPVELLKEVR----------------------ENLPLTEGAEELVKTLKE 99
Query: 158 KKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYK---PDPGP----------LLH 204
K + +I+ + ++ G+ + A E K GP LL
Sbjct: 100 KGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLI 159
Query: 205 ICSTWEVQPNEVMMVGDSLKDDVACGKRAGAF 236
+ + P + VGD D K AG
Sbjct: 160 LLRKEGISPENTVAVGDGANDLSMI-KAAGLG 190
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.004
Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 24/185 (12%)
Query: 71 VVFDMDGTLTVPVIDFPAM----YRAVLGEDEYKRVKAENPTGIDILHHIE----SWSPD 122
V+FD+DG L + ++ ++ + S D
Sbjct: 2 VLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSA-ED 60
Query: 123 LQRHAYQ-TIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT------RNIKEAVDL 175
Q Q E++G L+ +PG L L ++ + L+T + + L
Sbjct: 61 AQLLYKQLFYEALEKEG---LKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLELGL 117
Query: 176 FHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGA 235
+ S + KPDP L ++P+E + V DS + K AG
Sbjct: 118 RALFDVVIDSSDVGLG----KPDPDIYLQALKKLGLKPSECLFVDDSPA-GIDAAKAAGM 172
Query: 236 FTCLL 240
T L+
Sbjct: 173 HTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.004
Identities = 42/187 (22%), Positives = 62/187 (33%), Gaps = 49/187 (26%)
Query: 68 LRGVVFDMDGTL--TVPV-------------IDFPAMYRAVLGEDEYKRVKAENPTGIDI 112
+ V+FDMDG + T P+ I F Y L + DI
Sbjct: 1 YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLK----------GLSREDI 50
Query: 113 L-----HHIESWSPDLQRHAYQTIADFERQGLDRLQ---IMPGTAQLCGFLDSKKIRRGL 164
L + S + + H + + L RL ++PG L L +K I GL
Sbjct: 51 LRAILKLRGDGLSLE-EIHQLAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVGL 109
Query: 165 IT--RNIK------EAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216
+ +N D F + E + KP P L V PNE
Sbjct: 110 GSSSKNAPRILAKLGLRDYFDAIVD-------ASEVKNGKPHPETFLLAAELLGVPPNEC 162
Query: 217 MMVGDSL 223
++ D+L
Sbjct: 163 IVFEDAL 169
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 280 | |||
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.97 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.97 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.97 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.97 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.97 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.97 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.96 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.96 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.96 | |
| PLN02940 | 382 | riboflavin kinase | 99.95 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.95 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.95 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.95 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.95 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.94 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.94 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.94 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.94 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.93 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.93 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.92 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.92 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.91 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.91 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.9 | |
| PLN02811 | 220 | hydrolase | 99.9 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.9 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.9 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.9 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.9 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.89 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.89 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.88 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.88 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.88 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.87 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.87 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.86 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.86 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.86 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.85 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.83 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.83 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.83 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.82 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.8 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.79 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.79 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.78 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.77 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.77 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.77 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.76 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.76 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.75 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.74 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.73 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.73 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.72 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.71 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.71 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.7 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.69 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.69 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.68 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.68 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.67 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.66 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.66 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.65 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.64 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.61 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.6 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.57 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.56 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.56 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.56 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.53 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.52 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.51 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.5 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.47 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.47 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.47 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.46 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.45 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.45 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.42 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.42 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.42 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.41 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.4 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.39 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.38 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.37 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.37 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.37 | |
| PLN02887 | 580 | hydrolase family protein | 99.35 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.31 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.3 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.27 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.26 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 99.25 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.24 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.2 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.2 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.17 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 99.17 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.14 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.14 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.08 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.08 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 99.06 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.04 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.01 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.0 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.99 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.99 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.96 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.9 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.89 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.87 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.87 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.83 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.8 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.78 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.77 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.72 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.7 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.68 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.66 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.66 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.65 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.64 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.54 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.48 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.47 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.46 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.45 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.44 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.44 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 98.43 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.4 | |
| PLN02580 | 384 | trehalose-phosphatase | 98.39 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.39 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.37 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.32 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.32 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.31 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.26 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 98.22 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.21 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.2 | |
| PLN02423 | 245 | phosphomannomutase | 98.18 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.17 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 98.14 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.13 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.1 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.06 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.02 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.02 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.01 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.0 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.0 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.96 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.95 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.92 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.92 | |
| PLN02151 | 354 | trehalose-phosphatase | 97.9 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.88 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 97.83 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 97.81 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.73 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.72 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.71 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.48 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.46 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.43 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.31 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.27 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 97.27 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.25 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.15 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.09 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.93 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.92 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 96.79 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.71 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.26 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 95.98 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 95.97 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 95.82 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 95.68 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 95.4 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 95.33 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 95.21 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.2 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.02 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 94.56 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 94.25 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 94.11 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.01 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 93.9 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 93.67 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 93.18 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 92.92 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 92.56 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 92.18 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 92.16 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 92.13 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 91.6 | |
| KOG1605 | 262 | consensus TFIIF-interacting CTD phosphatase, inclu | 90.78 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 90.68 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 90.61 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 90.14 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 89.78 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 89.69 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 88.88 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 88.44 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 88.37 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 87.89 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 86.89 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 84.13 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 83.86 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 83.79 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 82.55 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 82.31 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 80.68 |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=212.62 Aligned_cols=203 Identities=21% Similarity=0.231 Sum_probs=152.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHh-cCCChhhHHHHhh-ccChhHHHHHHHHHHH-HHHhc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKA-ENPTGIDILHHIE-SWSPDLQRHAYQTIAD-FERQG 138 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 138 (280)
++|+|+|||||||+|+...+..+++.++ |.+. ....+. .+.+......... .......++..+.+.. |....
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEALI 90 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhh
Confidence 4699999999999999998888887776 5432 222222 2333333333221 2233333333333333 33333
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....++||+.++|+.|+++|++++++||+.....+..++.+|+. |+.+++++ .+..||+|++|..+++++|++|++
T Consensus 91 ~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~ 170 (229)
T PRK13226 91 GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD 170 (229)
T ss_pred hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence 345789999999999999999999999999999888899999987 88888876 678899999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|++|||+. +|+++|+++|+.+|++..+......... ..+++++++++.||.+++
T Consensus 171 ~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~~~~--~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 171 CVYVGDDE-RDILAARAAGMPSVAALWGYRLHDDDPL--AWQADVLVEQPQLLWNPA 224 (229)
T ss_pred EEEeCCCH-HHHHHHHHCCCcEEEEeecCCCCCcChh--hcCCCeeeCCHHHHHHHh
Confidence 99999999 9999999999999999753322221221 357999999999998875
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=211.85 Aligned_cols=202 Identities=21% Similarity=0.326 Sum_probs=154.6
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch---HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHh-cC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE---YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQ-GL 139 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (280)
++|+|+||+||||+|+...+..++.+.+ +... .......|.+..+.... +.+...+.....+..+... ..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 78 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSK---IDESKVEEMITTYREFNHEHHD 78 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHh---cCHHHHHHHHHHHHHHHHHhhh
Confidence 4799999999999999987777777665 3221 22333345444444433 2333334443434333222 23
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++|+.|+++|++++|+||+....++..++.+|+. |+.+++++ ....||+|+.++.+++++|++|+++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 45679999999999999999999999999999999999999998 89998876 6788999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
++|||+. +|+++|+++|+.++++.++... ..++. ...++++++++.++.+++...
T Consensus 159 ~~iGDs~-~Di~aa~~aG~~~i~v~~g~~~-~~~l~--~~~~~~~i~~~~~l~~~i~~~ 213 (214)
T PRK13288 159 LMVGDNH-HDILAGKNAGTKTAGVAWTIKG-REYLE--QYKPDFMLDKMSDLLAIVGDM 213 (214)
T ss_pred EEECCCH-HHHHHHHHCCCeEEEEcCCCCC-HHHHh--hcCcCEEECCHHHHHHHHhhc
Confidence 9999999 9999999999999999853211 11222 357999999999999987653
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=210.36 Aligned_cols=196 Identities=19% Similarity=0.268 Sum_probs=147.0
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCchHHHHHh-cCCChhhHHHHhh-ccChhHHHHHHHHHHHHHHhcCCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEYKRVKA-ENPTGIDILHHIE-SWSPDLQRHAYQTIADFERQGLDR 141 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 141 (280)
++|+|+|||||||+|+...+..++.+++ |.+....... .+.......+.+. ....+...........+.......
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMAGASEAEIQAEFTRLEQIEATDTEG 81 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhhcC
Confidence 4799999999999999998877777766 6554322222 3444444444432 122222222222222222333456
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
..++||+.++|+.|+++|++++|+||+........++..|+. |+.+++++ ....||+|+.|..+++++|++|++|++|
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~i 161 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVV 161 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence 789999999999999999999999999888888888888887 77788765 6688999999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
||+. .|+++|+++|+.+|+++++ +. ... ...++++++++.||.
T Consensus 162 gDs~-~di~aA~~aG~~~i~v~~~--~~--~~~--~~~~~~~~~~~~el~ 204 (218)
T PRK11587 162 EDAP-AGVLSGLAAGCHVIAVNAP--AD--TPR--LDEVDLVLHSLEQLT 204 (218)
T ss_pred ecch-hhhHHHHHCCCEEEEECCC--Cc--hhh--hccCCEEecchhhee
Confidence 9999 9999999999999999752 11 111 247999999999874
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=212.88 Aligned_cols=197 Identities=19% Similarity=0.283 Sum_probs=148.1
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCc----h-HHH-HHh-cCCChhhHHHHhhccChhHHHHHHHHHHH-H
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GED----E-YKR-VKA-ENPTGIDILHHIESWSPDLQRHAYQTIAD-F 134 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~----~-~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 134 (280)
.++|+|+|||||||+|+...+..++++++ |.+ . ... .+. .+....+....+.....+...+....... |
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 99 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALF 99 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHH
Confidence 45899999999999999997777777665 322 1 221 222 34444444443322111111122222222 2
Q ss_pred HHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCC
Q 023578 135 ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 135 ~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi 211 (280)
.........++||+.++|+.|+++|++++|+||+....++..++++|+. |+.+++++ ...+||+|++|..+++++|+
T Consensus 100 ~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~ 179 (248)
T PLN02770 100 RKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKV 179 (248)
T ss_pred HHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCC
Confidence 2222345789999999999999999999999999999999999999998 89998876 67889999999999999999
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH
Q 023578 212 QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267 (280)
Q Consensus 212 ~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d 267 (280)
+|++|++|||+. .|+++|+++|+.+|++.++ +...++. ..++++++.++.|
T Consensus 180 ~~~~~l~vgDs~-~Di~aA~~aGi~~i~v~~g--~~~~~l~--~~~a~~vi~~~~e 230 (248)
T PLN02770 180 SKDHTFVFEDSV-SGIKAGVAAGMPVVGLTTR--NPESLLM--EAKPTFLIKDYED 230 (248)
T ss_pred ChhHEEEEcCCH-HHHHHHHHCCCEEEEEeCC--CCHHHHh--hcCCCEEeccchh
Confidence 999999999999 9999999999999999853 2222222 3689999999999
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=206.26 Aligned_cols=205 Identities=23% Similarity=0.412 Sum_probs=156.1
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHh-cCCChhhHHHHhhccChhHHH-HHHHHHHH-HHHh
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKA-ENPTGIDILHHIESWSPDLQR-HAYQTIAD-FERQ 137 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~ 137 (280)
+++++|+||+||||+|+...+..+++..+ |.+. ...++. .+................... ...+.+.+ +...
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 35899999999999999998888766554 6653 333333 444444455444332221111 22222222 2222
Q ss_pred cCC--CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC
Q 023578 138 GLD--RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 138 ~~~--~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
... ...++||+.++|..|+++|++++|+||.....++..++.+|+. |+.+++++ ....||+|..+..+++++|++
T Consensus 82 ~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~ 161 (220)
T COG0546 82 YAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD 161 (220)
T ss_pred HHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC
Confidence 222 3579999999999999999999999999999999999999999 99999954 778999999999999999999
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
|++++||||+. +|+++|+++|+.+++|.++.. ...... ...+|++++++.||..++.+
T Consensus 162 ~~~~l~VGDs~-~Di~aA~~Ag~~~v~v~~g~~-~~~~l~--~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 162 PEEALMVGDSL-NDILAAKAAGVPAVGVTWGYN-SREELA--QAGADVVIDSLAELLALLAE 219 (220)
T ss_pred hhheEEECCCH-HHHHHHHHcCCCEEEEECCCC-CCcchh--hcCCCEEECCHHHHHHHHhc
Confidence 88999999999 999999999999999986432 222222 47899999999999988764
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=206.61 Aligned_cols=201 Identities=17% Similarity=0.188 Sum_probs=153.6
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHH-hcCCChhhHHHHhh---ccChhHHHHHHHHHHHHH-Hh
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVK-AENPTGIDILHHIE---SWSPDLQRHAYQTIADFE-RQ 137 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~ 137 (280)
+|+|+|||||||+|+...+..++++++ |.+. ....+ ..+....+.++.+. .......+.....+.+.+ ..
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEA 80 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 589999999999999998888888776 5543 22233 34555555555443 233333333433333322 22
Q ss_pred cC-CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----ccceeeCC-CCCCCCChHHHHHHHHhcCC
Q 023578 138 GL-DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSPALSRE-FRPYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 138 ~~-~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi 211 (280)
+. ....++||+.++|++|+++|++++|+||+....++..++.+|+. |+.+++++ ....||+|++|..+++++|+
T Consensus 81 ~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~ 160 (220)
T TIGR03351 81 YDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGV 160 (220)
T ss_pred hcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCC
Confidence 22 24589999999999999999999999999999999999999985 88888865 66789999999999999999
Q ss_pred C-CCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 212 Q-PNEVMMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 212 ~-~~~~v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
. |++|++|||+. +|+++|+++|+.+ +++.++.. ...... ..++++++.++.|+..++
T Consensus 161 ~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~~-~~~~~~--~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 161 QDVQSVAVAGDTP-NDLEAGINAGAGAVVGVLTGAH-DAEELS--RHPHTHVLDSVADLPALL 219 (220)
T ss_pred CChhHeEEeCCCH-HHHHHHHHCCCCeEEEEecCCC-cHHHHh--hcCCceeecCHHHHHHhh
Confidence 7 79999999999 9999999999999 88875322 222222 368999999999998875
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=209.80 Aligned_cols=202 Identities=16% Similarity=0.207 Sum_probs=146.7
Q ss_pred ccEEEEeCCCcccCCCC-CHHHHHHHHh---CCch-HH-HHHhcCCChhhHHHHhh-------------c--cChhHHHH
Q 023578 68 LRGVVFDMDGTLTVPVI-DFPAMYRAVL---GEDE-YK-RVKAENPTGIDILHHIE-------------S--WSPDLQRH 126 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~-~~~~~~~~~~---g~~~-~~-~~~~~~~~~~~~~~~~~-------------~--~~~~~~~~ 126 (280)
+|+|+|||||||+|+.. .+..++++.+ |.+. .. .....+.+.......+. . ...+....
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIEA 81 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHHH
Confidence 68999999999999864 3455555554 5433 22 22233333322222111 1 12222333
Q ss_pred HHHHHHHH-HHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c-cceeeCC-CCCCCCChHH
Q 023578 127 AYQTIADF-ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F-SPALSRE-FRPYKPDPGP 201 (280)
Q Consensus 127 ~~~~~~~~-~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f-d~v~~~~-~~~~Kp~~~~ 201 (280)
+...+..+ .+.......++||+.++|+.|+++|++++|+||+....++.+++++|+. | +.+++++ ....||+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~ 161 (253)
T TIGR01422 82 IYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWM 161 (253)
T ss_pred HHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHH
Confidence 33333332 2333356789999999999999999999999999999999999999987 4 7888876 6688999999
Q ss_pred HHHHHHhcCCC-CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC---C-------------------ccccccCCCCC
Q 023578 202 LLHICSTWEVQ-PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY---S-------------------ADDFTKSNLQP 258 (280)
Q Consensus 202 ~~~~~~~lgi~-~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~---~-------------------~~~~~~~~~~~ 258 (280)
|..+++++|+. |++|++|||+. +|+++|+++|+.+|+|.++... . ..++. ..++
T Consensus 162 ~~~a~~~l~~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~ 238 (253)
T TIGR01422 162 ALKNAIELGVYDVAACVKVGDTV-PDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLK--AAGA 238 (253)
T ss_pred HHHHHHHcCCCCchheEEECCcH-HHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHH--hcCC
Confidence 99999999995 99999999999 9999999999999999853221 0 11222 4789
Q ss_pred CEEEcCHHHHHHHH
Q 023578 259 DFRVSSLTEVLSIL 272 (280)
Q Consensus 259 d~v~~~~~dl~~~l 272 (280)
+++++++.|+.++|
T Consensus 239 ~~v~~~~~el~~~~ 252 (253)
T TIGR01422 239 HYVIDTLAELPAVI 252 (253)
T ss_pred CEehhcHHHHHHhh
Confidence 99999999998765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=211.06 Aligned_cols=207 Identities=14% Similarity=0.142 Sum_probs=148.3
Q ss_pred CCccEEEEeCCCcccCCCCC-HHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhh-------------cc--ChhHH
Q 023578 66 TRLRGVVFDMDGTLTVPVID-FPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIE-------------SW--SPDLQ 124 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~-~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~ 124 (280)
+++|+|+||+||||+|+... +..++++.+ |.+. .......+.......+.+. .. ..+..
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 81 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADV 81 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHH
Confidence 35899999999999998643 355666554 5543 2222234433333222211 11 11222
Q ss_pred HHHHHHHHH-HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC-CCCCCCCh
Q 023578 125 RHAYQTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE-FRPYKPDP 199 (280)
Q Consensus 125 ~~~~~~~~~-~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~-~~~~Kp~~ 199 (280)
......+.. +.+.......++||+.++|+.|+++|++++|+||+....+...++.+++. |+.+++++ .+..||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p 161 (267)
T PRK13478 82 DALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYP 161 (267)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCCh
Confidence 333333322 22333345689999999999999999999999999999999999887765 47788765 66889999
Q ss_pred HHHHHHHHhcCCC-CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC---C-------------------ccccccCCC
Q 023578 200 GPLLHICSTWEVQ-PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY---S-------------------ADDFTKSNL 256 (280)
Q Consensus 200 ~~~~~~~~~lgi~-~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~---~-------------------~~~~~~~~~ 256 (280)
++|..+++++|+. +++|+||||+. +|+++|+++|+.+|+|.+++.. + ...+. ..
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~ 238 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTV-PGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLR--AA 238 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcH-HHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHH--Hc
Confidence 9999999999996 69999999999 9999999999999999863321 0 01222 46
Q ss_pred CCCEEEcCHHHHHHHHHhc
Q 023578 257 QPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 257 ~~d~v~~~~~dl~~~l~~~ 275 (280)
+++++++++.|+.++++.+
T Consensus 239 ~a~~vi~~~~~l~~~l~~~ 257 (267)
T PRK13478 239 GAHYVIDTIADLPAVIADI 257 (267)
T ss_pred CCCeehhhHHHHHHHHHHH
Confidence 8999999999999988654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=206.86 Aligned_cols=200 Identities=16% Similarity=0.193 Sum_probs=151.6
Q ss_pred CCccEEEEeCCCcccCCCC-CHHHHHHHHh---CCch--HHHH-HhcCCChhhHHHHhhcc--ChhHHHHHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVI-DFPAMYRAVL---GEDE--YKRV-KAENPTGIDILHHIESW--SPDLQRHAYQTIADFER 136 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~-~~~~~~~~~~---g~~~--~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 136 (280)
..+|+|+|||||||+||.. .+..+|.+++ |.+. .... ...|.+.......+..+ .......+......++.
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 101 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYE 101 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 3489999999999999964 4445666554 6553 2233 34566666666555432 22223333333333322
Q ss_pred hc-CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC
Q 023578 137 QG-LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 137 ~~-~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
.. .....++||+.++|+.|+++|++++|+||+....++..++++|+. |+.+++++ ...+||+|++|..+++++|++
T Consensus 102 ~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~ 181 (260)
T PLN03243 102 YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFI 181 (260)
T ss_pred HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCC
Confidence 21 234678999999999999999999999999999999999999998 99998876 668999999999999999999
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|++|++|||+. .|+++|+++|+.+|++.. .+..... ..+++++.++.|+....
T Consensus 182 p~~~l~IgDs~-~Di~aA~~aG~~~i~v~g--~~~~~~l----~~ad~vi~~~~el~~~~ 234 (260)
T PLN03243 182 PERCIVFGNSN-SSVEAAHDGCMKCVAVAG--KHPVYEL----SAGDLVVRRLDDLSVVD 234 (260)
T ss_pred hHHeEEEcCCH-HHHHHHHHcCCEEEEEec--CCchhhh----ccCCEEeCCHHHHHHHH
Confidence 99999999999 999999999999999963 2222221 36899999999987764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-29 Score=208.35 Aligned_cols=208 Identities=23% Similarity=0.292 Sum_probs=156.7
Q ss_pred CCCCCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHH-HhcCCChhhHHHHhh-------ccChhHHHHHHH
Q 023578 63 KPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRV-KAENPTGIDILHHIE-------SWSPDLQRHAYQ 129 (280)
Q Consensus 63 ~~~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 129 (280)
.+.+.+|+|+|||||||+|+...+..++..++ |.+. .... ...+.........+. ..++...+....
T Consensus 8 ~~~~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 87 (272)
T PRK13223 8 FPGRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALA 87 (272)
T ss_pred CCCccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHH
Confidence 34456899999999999999998887777765 5443 2222 223433333333321 123333444444
Q ss_pred HHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHH
Q 023578 130 TIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHIC 206 (280)
Q Consensus 130 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~ 206 (280)
.+.+.+........++||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||+|++++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~ 167 (272)
T PRK13223 88 LFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVM 167 (272)
T ss_pred HHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHH
Confidence 444444433345678999999999999999999999999999999999999987 88888876 667899999999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+++|++|++|++|||+. +|+++|+++|+.+++|..+.. ...+.. ...++++++++.+|.+++..
T Consensus 168 ~~~g~~~~~~l~IGD~~-~Di~aA~~aGi~~i~v~~G~~-~~~~l~--~~~~~~vi~~l~el~~~~~~ 231 (272)
T PRK13223 168 KMAGVPPSQSLFVGDSR-SDVLAAKAAGVQCVALSYGYN-HGRPIA--EESPALVIDDLRALLPGCAD 231 (272)
T ss_pred HHhCCChhHEEEECCCH-HHHHHHHHCCCeEEEEecCCC-Cchhhh--hcCCCEEECCHHHHHHHHhc
Confidence 99999999999999999 999999999999999975222 121222 25899999999999987654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=209.06 Aligned_cols=204 Identities=23% Similarity=0.312 Sum_probs=155.3
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHH-hcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcC
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVK-AENPTGIDILHHIESWSPDLQRHAYQTIADFERQGL 139 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (280)
+.+|+++|||||||+||...+..++++++ |.+. ...+. ..+.......+.+ .......++....+.++.....
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~ 138 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRA-GLSPWQQARLLQRVQRQLGDCL 138 (273)
T ss_pred hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHc-CCCHHHHHHHHHHHHHHHHhhc
Confidence 35899999999999999987777777765 5432 22222 2333444443332 2333334444444444445555
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
....++||+.++|+.|+++|++++|+||+....++..++.+|+. |+.+++++... ++++.+..+++++|++|++|+
T Consensus 139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~--~k~~~~~~~l~~~~~~p~~~l 216 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL--SKRRALSQLVAREGWQPAAVM 216 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC--CCHHHHHHHHHHhCcChhHEE
Confidence 67789999999999999999999999999999999999999998 88887766443 456899999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+|||+. +|+++|+++|+.+|++.++.. ...++. ...++++++++.||++++.+++
T Consensus 217 ~IGDs~-~Di~aA~~AG~~~I~v~~g~~-~~~~l~--~~~ad~~i~~~~eL~~~~~~~~ 271 (273)
T PRK13225 217 YVGDET-RDVEAARQVGLIAVAVTWGFN-DRQSLV--AACPDWLLETPSDLLQAVTQLM 271 (273)
T ss_pred EECCCH-HHHHHHHHCCCeEEEEecCCC-CHHHHH--HCCCCEEECCHHHHHHHHHHHh
Confidence 999999 999999999999999985221 111222 3589999999999999987764
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=202.68 Aligned_cols=198 Identities=26% Similarity=0.358 Sum_probs=148.6
Q ss_pred EEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHH-HhcCCChhhHHHHhhc-----cChhHHHHHHHHHHHHH-Hhc
Q 023578 71 VVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRV-KAENPTGIDILHHIES-----WSPDLQRHAYQTIADFE-RQG 138 (280)
Q Consensus 71 iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~ 138 (280)
|+||+||||+|+...+..++++.+ |.+. ...+ ...+.........+.. ...+..+.....+..++ ...
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVA 80 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhc
Confidence 689999999999887777777665 5542 2222 2244444444443321 12222333333333333 333
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....++||+.++|+.|+++|++++|+||+....++..++++|+. |+.+++++ .+..||+|+.|..+++++|++|++
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 160 (213)
T TIGR01449 81 GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQ 160 (213)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhH
Confidence 345789999999999999999999999999999999999999997 88888866 668899999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|++|||+. +|+++|+++|+.++++.++... ..... ...++++++++.|+..+|
T Consensus 161 ~~~igDs~-~d~~aa~~aG~~~i~v~~g~~~-~~~l~--~~~a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 161 MVYVGDSR-VDIQAARAAGCPSVLLTYGYRY-GEAID--LLPPDVLYDSLNELPPLL 213 (213)
T ss_pred eEEeCCCH-HHHHHHHHCCCeEEEEccCCCC-Ccchh--hcCCCeEeCCHHHHHhhC
Confidence 99999999 9999999999999999753221 12222 358999999999988753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=203.36 Aligned_cols=199 Identities=18% Similarity=0.244 Sum_probs=148.9
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCchH--HHH-HhcCCChhhHHHHhh---ccChhHHHHHH-HHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEY--KRV-KAENPTGIDILHHIE---SWSPDLQRHAY-QTIADFER 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~--~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~ 136 (280)
++|+|+||+||||+|+...+..++.+++ |.+.. ... ...+.........+. .+......... ...+.+.+
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVIS 85 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 4899999999999999988887777655 54431 222 223433333333221 12111122222 22222333
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.......++||+.++|+.|+++|++++|+||+....++..++.+|+. |+.+++++ .+.+||+|++++.+++++|++|
T Consensus 86 ~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 165 (222)
T PRK10826 86 LIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDP 165 (222)
T ss_pred HHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCH
Confidence 33456789999999999999999999999999999999999999998 89888865 6789999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~ 270 (280)
++|++|||+. +|+++|+++|+.+|++.++.... +.. ...+++++.++.|+..
T Consensus 166 ~~~~~igDs~-~Di~aA~~aG~~~i~v~~~~~~~--~~~--~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 166 LTCVALEDSF-NGMIAAKAARMRSIVVPAPEQQN--DPR--WALADVKLESLTELTA 217 (222)
T ss_pred HHeEEEcCCh-hhHHHHHHcCCEEEEecCCccCc--hhh--hhhhheeccCHHHHhh
Confidence 9999999999 99999999999999998643221 111 2468999999999865
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=198.75 Aligned_cols=205 Identities=23% Similarity=0.354 Sum_probs=155.9
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHH-hcCCChhhHHHHhhc-----cChhHHHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVK-AENPTGIDILHHIES-----WSPDLQRHAYQTIADF 134 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 134 (280)
+++++|+||+||||+|+...+..++...+ |.+. ...+. ..+............ ...+..+.....+..+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRH 83 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHH
Confidence 45899999999999999876666666554 5442 22232 234444444444322 2334444444444443
Q ss_pred HHh-cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcC
Q 023578 135 ERQ-GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 135 ~~~-~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lg 210 (280)
+.. ......++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ ....||+|++++.++++++
T Consensus 84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 163 (226)
T PRK13222 84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLG 163 (226)
T ss_pred HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcC
Confidence 333 3335789999999999999999999999999999999999999987 88888865 6688999999999999999
Q ss_pred CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+++++|++|||+. +|+++|+++|+.+|++.++..... +.. ...+++++.++.||..++.+
T Consensus 164 ~~~~~~i~igD~~-~Di~~a~~~g~~~i~v~~g~~~~~-~~~--~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 164 LDPEEMLFVGDSR-NDIQAARAAGCPSVGVTYGYNYGE-PIA--LSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred CChhheEEECCCH-HHHHHHHHCCCcEEEECcCCCCcc-chh--hcCCCEEECCHHHHHHHHHH
Confidence 9999999999999 999999999999999985332222 222 35899999999999998864
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=209.11 Aligned_cols=204 Identities=16% Similarity=0.211 Sum_probs=155.7
Q ss_pred CccEEEEeCCCcccCCCC-CHHHHHHHHh---CCch--HHHH-HhcCCChhhHHHHhhcc--ChhHHHHHHHHHHHHHH-
Q 023578 67 RLRGVVFDMDGTLTVPVI-DFPAMYRAVL---GEDE--YKRV-KAENPTGIDILHHIESW--SPDLQRHAYQTIADFER- 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~-~~~~~~~~~~---g~~~--~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 136 (280)
..++|||||||||+|+.. .+..+|.+++ |.+. .... ...|.+..+....+..+ .....+.+...+.+++.
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 589999999999999887 3444666554 6554 2222 34566666666655432 23334444444444333
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.......++||+.++|+.|+++|++++|+||+....++..++++|+. |+.+++++ ....||+|++|..+++++|++|
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~P 289 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIP 289 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCc
Confidence 23345678999999999999999999999999999999999999998 99999876 6678999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH-HHHHHhccC
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV-LSILEANFD 277 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl-~~~l~~~~~ 277 (280)
++|++|||+. .|+++|+++|+.+|++.+. +...+ ...++++++++.|| ...++.+++
T Consensus 290 eecl~IGDS~-~DIeAAk~AGm~~IgV~~~--~~~~~----l~~Ad~iI~s~~EL~~~~l~~l~~ 347 (381)
T PLN02575 290 ERCIVFGNSN-QTVEAAHDARMKCVAVASK--HPIYE----LGAADLVVRRLDELSIVDLKNLAD 347 (381)
T ss_pred ccEEEEcCCH-HHHHHHHHcCCEEEEECCC--CChhH----hcCCCEEECCHHHHHHHHHhhhhh
Confidence 9999999999 9999999999999999742 21111 13699999999998 334454443
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=199.48 Aligned_cols=205 Identities=20% Similarity=0.241 Sum_probs=152.2
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-H-HHHHhcCCChhhHHHHhhccCh----hHHHHHHHHHHHHHHhc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-Y-KRVKAENPTGIDILHHIESWSP----DLQRHAYQTIADFERQG 138 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 138 (280)
+|++||||||||+||...+.++|.+++ |... . ......+.........+..... .................
T Consensus 2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEALE 81 (221)
T ss_pred CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHhh
Confidence 699999999999999998888888877 5443 2 2223334333333333322111 11112222222333444
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....+.||+.++|+.|+++|++++++|++.+..++..++.+|+. |+.+++++ +..+||+|+.|..+++++|++|++
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~ 161 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEE 161 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHH
Confidence 567889999999999999999999999999999999999999988 99887754 778899999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
|++|+|+. +++++|+++||.+|++....... .........++.+..++.++...+.+
T Consensus 162 CvviEDs~-~Gi~Aa~aAGm~vv~v~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (221)
T COG0637 162 CVVVEDSP-AGIQAAKAAGMRVVGVPAGHDRP-HLDPLDAHGADTVLLDLAELPALLEA 218 (221)
T ss_pred eEEEecch-hHHHHHHHCCCEEEEecCCCCcc-ccchhhhhhcchhhccHHHHHHHHHh
Confidence 99999999 99999999999999998622221 01111135777788888888877654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=196.08 Aligned_cols=194 Identities=18% Similarity=0.313 Sum_probs=145.2
Q ss_pred EEEeCCCcccCCCCCHHHHHHHHh----CCch--HHHHH-hcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcc
Q 023578 71 VVFDMDGTLTVPVIDFPAMYRAVL----GEDE--YKRVK-AENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQ 143 (280)
Q Consensus 71 iiFD~DGTL~d~~~~~~~~~~~~~----g~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (280)
|+|||||||+|+...+.+++++++ |.+. ...++ ..+.......+.+ ......... ....++ .......
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~---~~~~~~-~~~~~~~ 75 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRIM-GLPLEMEEP---FVRESY-RLAGEVE 75 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHHc-CCCHHHHHH---HHHHHH-Hhhcccc
Confidence 689999999999998888877664 3322 22222 2343333333332 111111111 111222 2235678
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
++||+.++|++|+++|++++|+||+....++..++.+|+. |+.+++++ .+.+||+|+.|+.+++++|++|++|++||
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ig 155 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVG 155 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEc
Confidence 9999999999999999999999999999999999999997 88888865 66889999999999999999999999999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
|+. +|+++|+++|+.++++.++.... .++. +.++++++.++.+|..++.
T Consensus 156 D~~-~Di~aA~~~Gi~~i~~~~g~~~~-~~l~--~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 156 DAV-TDLASARAAGTATVAALWGEGDA-GELL--AARPDFLLRKPQSLLALCR 204 (205)
T ss_pred CCH-HHHHHHHHcCCeEEEEEecCCCh-hhhh--hcCCCeeeCCHHHHHHHhh
Confidence 999 99999999999999998532211 1222 3689999999999988764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-28 Score=196.36 Aligned_cols=196 Identities=21% Similarity=0.299 Sum_probs=138.0
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh------CCch-HHHHH--------hcCCC----hhhHHHHhh-ccChhHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL------GEDE-YKRVK--------AENPT----GIDILHHIE-SWSPDLQRHA 127 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~------g~~~-~~~~~--------~~~~~----~~~~~~~~~-~~~~~~~~~~ 127 (280)
+++|+||+||||+|+...+..+++.+. |.+. ..... ..+.. .......+. .... +..
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 78 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNP---KLV 78 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCH---HHH
Confidence 689999999999999987766655431 3322 11110 01110 000111110 0011 111
Q ss_pred HHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHH
Q 023578 128 YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLH 204 (280)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~ 204 (280)
.+....+.........++||+.++|+.|+++|++++++||+....++..++++|+. |+.+++++ .+..||+|++|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~ 158 (221)
T TIGR02253 79 AAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYA 158 (221)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHH
Confidence 12222222222345689999999999999999999999999988899999999998 89888765 7789999999999
Q ss_pred HHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 205 ICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 205 ~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
+++++|++|+++++|||+..+|+.+|+++|+.+|++.++.... .+.. ....+++++.++.|+
T Consensus 159 ~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~-~~~~-~~~~~~~~i~~~~el 220 (221)
T TIGR02253 159 ALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSK-MEDD-VYPYPDYEISSLREL 220 (221)
T ss_pred HHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcc-cccc-cccCCCeeeCcHHhh
Confidence 9999999999999999997479999999999999998633221 1111 135789999999886
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=195.27 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=109.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||+|++|..+++++|++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 55789999999999999999999999999999999999999987 89988865 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 217 MMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+||||+. .|+++|+++||.+ ++|.++.. ... ..+..+..++.++.+++..+.
T Consensus 170 l~igDs~-~di~aA~~aG~~~~~~v~~~~~----~~~---~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 170 LFIDDSE-PILDAAAQFGIRYCLGVTNPDS----GIA---EKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred EEEcCCH-HHHHHHHHcCCeEEEEEeCCCC----Ccc---chhccCCCcHHHHHHHhhhhc
Confidence 9999999 9999999999974 66764211 111 245555678888888877664
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=192.27 Aligned_cols=130 Identities=28% Similarity=0.397 Sum_probs=110.5
Q ss_pred cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC-C
Q 023578 138 GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ-P 213 (280)
Q Consensus 138 ~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~-~ 213 (280)
+.....++||+.++|+.|+ +|++++++||+....++..++.+|+. |+.+++++ .+..||+|++|..+++++|+. +
T Consensus 90 ~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 168 (224)
T PRK09449 90 MAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDR 168 (224)
T ss_pred HhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCc
Confidence 3344679999999999999 57999999999999999999999998 99988865 778999999999999999985 5
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
++|++|||+..+|+++|+++|+.+|++++. +..... ...+++++.++.||.++++
T Consensus 169 ~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~---~~~~~~--~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 169 SRVLMVGDNLHSDILGGINAGIDTCWLNAH---GREQPE--GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred ccEEEEcCCcHHHHHHHHHCCCcEEEECCC---CCCCCC--CCCCeEEECCHHHHHHHHh
Confidence 799999999724999999999999999742 221111 2468999999999998875
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=206.44 Aligned_cols=199 Identities=20% Similarity=0.267 Sum_probs=149.7
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhc-cC-hhHHHHHHHHHHHHHHhc
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIES-WS-PDLQRHAYQTIADFERQG 138 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 138 (280)
..+|+|+||+||||+|+...+..++..++ |.+. .......+....+....+.. .. ....+++...+..+....
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQ 88 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 34899999999999999998888877765 5433 22223345444444433321 11 112233333333333333
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHH-HcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCC
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN-RFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~-~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
.....++||+.++|+.|+++|++++|+||+....++..++ .+|+. |+.+++++ ....||+|++|..+++++|++|+
T Consensus 89 ~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 89 WCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 3567899999999999999999999999999998888886 68887 99999876 67899999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~ 270 (280)
+|++|||+. .|+++|+++|+.+|++.++. .... . ...+++++.++.|+..
T Consensus 169 ~~l~VGDs~-~Di~aA~~aGi~~I~v~~g~--~~~~--~-~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 169 NCLVIEDSL-PGVMAGKAAGMEVIAVPSIP--KQTH--L-YSSADEVINSLLDLQP 218 (382)
T ss_pred HEEEEeCCH-HHHHHHHHcCCEEEEECCCC--cchh--h-ccCccEEeCCHhHcCH
Confidence 999999999 99999999999999998521 1111 1 3589999999999754
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=189.81 Aligned_cols=199 Identities=22% Similarity=0.277 Sum_probs=140.2
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCchH-HHHHhcCCChhhHHHHhh--ccChhH-----HHHHH--------
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEY-KRVKAENPTGIDILHHIE--SWSPDL-----QRHAY-------- 128 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~-------- 128 (280)
+|+|+||+||||+|+...+..++.+++ |.+.. ................+. ...... .....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD 80 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence 589999999999999997776666654 54421 111000000001111110 000000 00000
Q ss_pred --HHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHH
Q 023578 129 --QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLL 203 (280)
Q Consensus 129 --~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~ 203 (280)
.....+.+.......++||+.++|++|+++ ++++++||+....++..++.+|+. |+.+++++ .+..||+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~ 159 (224)
T TIGR02254 81 EALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFN 159 (224)
T ss_pred HHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHH
Confidence 111122222223467999999999999999 999999999999999999999998 99998865 788999999999
Q ss_pred HHHHhc-CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 204 HICSTW-EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 204 ~~~~~l-gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
.+++++ |++|++++||||+..+|+++|+++|+.+|++++++. . ... ...++++++++.||.++|
T Consensus 160 ~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~-~--~~~--~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 160 YALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMH-P--NPD--DIIPTYEIRSLEELYEIL 224 (224)
T ss_pred HHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCC-C--CCC--CCCCceEECCHHHHHhhC
Confidence 999999 999999999999973599999999999999985322 1 111 357899999999998764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=191.09 Aligned_cols=126 Identities=24% Similarity=0.290 Sum_probs=103.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++|+.|+++ ++++++||+... ++.+|+. |+.+++++ .+..||+|++|..+++++|++|++|
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence 4568999999999999976 999999998764 3678887 89988765 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+||||+...|+.+|+++|+.+|++++.+..-... ......+++++.++.||.++|
T Consensus 184 ~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~-~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 184 LHVGDDLTTDVAGAIRCGMQACWINPENGDLMQT-WDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EEEcCCcHHHHHHHHHCCCeEEEEcCCCcccccc-ccccCCCCEEECCHHHHHhhC
Confidence 9999993299999999999999998643211111 111247999999999998864
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=188.47 Aligned_cols=199 Identities=17% Similarity=0.225 Sum_probs=144.0
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HH-HHHh-cCCChhhHHHHhhc-cC-hhHHHHHHHHHHH-HHHh
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YK-RVKA-ENPTGIDILHHIES-WS-PDLQRHAYQTIAD-FERQ 137 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~-~~~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~-~~~~ 137 (280)
++|+|+||+||||+|+...+.+++.+.+ |.+. .. .... .+.........+.. .. ....+.+...+.. +...
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVARL 82 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 4899999999999999887777776665 5543 22 2222 33344444444322 11 1112223222222 2222
Q ss_pred cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc-ceeeC-CCCCCCCChHHHHHHHHhcCCCC
Q 023578 138 GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS-PALSR-EFRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 138 ~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd-~v~~~-~~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
......++||+.++|+.|+ ++++|+||+....++..++++|+. |+ .++++ +.+..||+|+.|..+++++|++|
T Consensus 83 ~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p 159 (221)
T PRK10563 83 FDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNV 159 (221)
T ss_pred HHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCH
Confidence 2345789999999999993 899999999999999999999998 75 56776 47889999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
++|++|||+. .|+++|+++|+.+|++...+ .. ... ...++.++.++.||.+++..
T Consensus 160 ~~~l~igDs~-~di~aA~~aG~~~i~~~~~~-~~-~~~---~~~~~~~~~~~~~l~~~~~~ 214 (221)
T PRK10563 160 ENCILVDDSS-AGAQSGIAAGMEVFYFCADP-HN-KPI---DHPLVTTFTDLAQLPELWKA 214 (221)
T ss_pred HHeEEEeCcH-hhHHHHHHCCCEEEEECCCC-CC-cch---hhhhhHHHHHHHHHHHHHHH
Confidence 9999999999 99999999999999986321 11 111 23566778999998887764
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=192.83 Aligned_cols=197 Identities=17% Similarity=0.208 Sum_probs=138.8
Q ss_pred CccEEEEeCCCcccCCC-CCHHHHHHHHh---CCch----HH---HHHhcCCChhhHHHHhh--ccC----------hhH
Q 023578 67 RLRGVVFDMDGTLTVPV-IDFPAMYRAVL---GEDE----YK---RVKAENPTGIDILHHIE--SWS----------PDL 123 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~-~~~~~~~~~~~---g~~~----~~---~~~~~~~~~~~~~~~~~--~~~----------~~~ 123 (280)
.+++|+|||||||+|+. ..+..++++++ |.+. .. .+...+.+.......+. .+. ++.
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 118 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDEEE 118 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCccchh
Confidence 47999999999999999 77777777665 6621 11 12223433333333221 111 111
Q ss_pred HHH----HHHHHHHHHHhcC-C-CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCC-c----ccceeeCC-
Q 023578 124 QRH----AYQTIADFERQGL-D-RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI-T----FSPALSRE- 191 (280)
Q Consensus 124 ~~~----~~~~~~~~~~~~~-~-~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~-~----fd~v~~~~- 191 (280)
.+. +......++.... . .+.++||+.++|+.|+++|++++|+||+....+..+++.++. . |+.+ +++
T Consensus 119 ~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~ 197 (286)
T PLN02779 119 RKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDD 197 (286)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccc
Confidence 111 2222222222221 2 257999999999999999999999999999999888887642 2 3444 444
Q ss_pred CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH
Q 023578 192 FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270 (280)
Q Consensus 192 ~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~ 270 (280)
.+..||+|++|..+++++|++|++|++|||+. +|+++|+++|+.+|++.++ +...+.. ..++++++++.++..
T Consensus 198 ~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g--~~~~~~l---~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 198 VPKKKPDPDIYNLAAETLGVDPSRCVVVEDSV-IGLQAAKAAGMRCIVTKSS--YTADEDF---SGADAVFDCLGDVPL 270 (286)
T ss_pred cCCCCCCHHHHHHHHHHhCcChHHEEEEeCCH-HhHHHHHHcCCEEEEEccC--Ccccccc---CCCcEEECChhhcch
Confidence 67889999999999999999999999999999 9999999999999999753 2222111 479999999998754
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-26 Score=205.45 Aligned_cols=204 Identities=15% Similarity=0.185 Sum_probs=150.2
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCc----------hHHHH-HhcCCChhhHHHHhhc-cChhHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGED----------EYKRV-KAENPTGIDILHHIES-WSPDLQRHAYQTIADF 134 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~----------~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 134 (280)
++++|+|||||||+|+...+..+|++.+... ....+ +..|....+.+..+.. ......+.....+.++
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 319 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLEIREQTDAYFLER 319 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 4799999999999999998887777765111 11222 2345555555444422 1111112222222222
Q ss_pred H-Hhc-CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcC
Q 023578 135 E-RQG-LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 135 ~-~~~-~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lg 210 (280)
+ +.. .....++||+.++|+.|+++|++++|+||+....++..++.+|+. |+.+++++....||+|+.+..++++++
T Consensus 320 ~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~ 399 (459)
T PRK06698 320 LIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD 399 (459)
T ss_pred hHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC
Confidence 2 211 234688999999999999999999999999999999999999998 899999875455788899999999875
Q ss_pred CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccCC
Q 023578 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDL 278 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~~ 278 (280)
|++|++|||+. +|+.+|+++|+.+|++.++ +...+.. ..++++++++.|+.++++.+..|
T Consensus 400 --~~~~v~VGDs~-~Di~aAk~AG~~~I~v~~~--~~~~~~~---~~~d~~i~~l~el~~~l~~~~~~ 459 (459)
T PRK06698 400 --IKEAAVVGDRL-SDINAAKDNGLIAIGCNFD--FAQEDEL---AQADIVIDDLLELKGILSTVQRL 459 (459)
T ss_pred --cceEEEEeCCH-HHHHHHHHCCCeEEEEeCC--CCccccc---CCCCEEeCCHHHHHHHHHHHhcC
Confidence 68999999999 9999999999999999852 2221112 36999999999999999887654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=185.21 Aligned_cols=104 Identities=23% Similarity=0.337 Sum_probs=97.1
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++|++|+++|++++++||+....++..++++|+. |+.+++++ .+..||+|++|+.+++++|++|++|
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 35678999999999999999999999999999999999999987 99988865 7889999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETG 244 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~ 244 (280)
++|||+. +|+.+|+++|+.+|++++++
T Consensus 169 ~~vgD~~-~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 169 LFVASNP-WDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred EEEeCCH-HHHHHHHHCCCcEEEecCCC
Confidence 9999999 99999999999999998643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=181.41 Aligned_cols=170 Identities=23% Similarity=0.355 Sum_probs=130.0
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHHH-hcCCChhhHHHHhh-----ccChhHHHHHHHHHHHHHHh
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRVK-AENPTGIDILHHIE-----SWSPDLQRHAYQTIADFERQ 137 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 137 (280)
+|+|+||+||||+|+...+..++...+ |.+. ..... ..+.........+. .+.........+....+...
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRE 80 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 488999999999999987766666554 5443 11112 23444444444432 23334444444444444433
Q ss_pred c--CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC
Q 023578 138 G--LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 138 ~--~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
. .....++||+.++|+.|+++|++++++||+ ..++..++.+|+. |+.+++++ .+..||+|++|..+++++|++
T Consensus 81 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~ 158 (185)
T TIGR02009 81 LLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVS 158 (185)
T ss_pred HHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCC
Confidence 3 235789999999999999999999999998 5678899999998 89888865 678999999999999999999
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v 240 (280)
|+++++|||+. +|+++|+++|+.+|+|
T Consensus 159 ~~~~v~IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 159 PNECVVFEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred HHHeEEEeCcH-hhHHHHHHCCCeEeeC
Confidence 99999999999 9999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=178.99 Aligned_cols=168 Identities=21% Similarity=0.301 Sum_probs=124.5
Q ss_pred EEEEeCCCcccCCCCCHHHHHHHHh---CCchH-HH-HHhcCCChhhHHHHhhc-----cChhHHHHHHHHHHHHHHhc-
Q 023578 70 GVVFDMDGTLTVPVIDFPAMYRAVL---GEDEY-KR-VKAENPTGIDILHHIES-----WSPDLQRHAYQTIADFERQG- 138 (280)
Q Consensus 70 ~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~-~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~- 138 (280)
+|+||+||||+|+...+..++++.+ |.+.. .. ....+.+..+....+.. ++.+............+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELL 80 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999998887777655 55431 11 12234444444443321 23333333333222222111
Q ss_pred --CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 139 --LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 139 --~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.....++||+.++|+.|+++|++++++||+.. ....++++|+. |+.+++++ .+..||+|+.|+.+++++|++|
T Consensus 81 ~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~ 158 (185)
T TIGR01990 81 KELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSP 158 (185)
T ss_pred HhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCH
Confidence 12347899999999999999999999998753 46688999998 89988765 7789999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEE
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v 240 (280)
++|++|||+. +|+++|+++|+.+|+|
T Consensus 159 ~~~v~vgD~~-~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 159 SECIGIEDAQ-AGIEAIKAAGMFAVGV 184 (185)
T ss_pred HHeEEEecCH-HHHHHHHHcCCEEEec
Confidence 9999999999 9999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=177.67 Aligned_cols=172 Identities=17% Similarity=0.235 Sum_probs=128.7
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHH-HhcCCChhhHHHHhhcc-C-hhHHHHHHHHHHH-HHHhc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRV-KAENPTGIDILHHIESW-S-PDLQRHAYQTIAD-FERQG 138 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~ 138 (280)
++|+|+||+||||+|+...+.+++.+.+ |.+. .... ...+....+....+... . ....+.+...... +.+..
T Consensus 4 ~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKSML 83 (188)
T ss_pred cceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 4799999999999999988777777776 5433 2222 22444444444433221 1 1111222222222 22233
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....++|+ .++|..|++. ++++|+||+....++..++++|+. |+.+++++ .+..||+|++|..+++++|++|++
T Consensus 84 ~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 161 (188)
T PRK10725 84 LDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161 (188)
T ss_pred hccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHH
Confidence 345567885 6899999876 899999999999999999999998 89988876 678999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
|++|||+. +|+++|+++|+.+|++.
T Consensus 162 ~l~igDs~-~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 162 CVVFEDAD-FGIQAARAAGMDAVDVR 186 (188)
T ss_pred eEEEeccH-hhHHHHHHCCCEEEeec
Confidence 99999999 99999999999999985
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=182.43 Aligned_cols=129 Identities=26% Similarity=0.401 Sum_probs=114.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
..+++|++.+.|+.++.+ ++++++||+....+...++.+|+. ||.+++++ .+..||+|++|+.+++++|++|++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 478999999999999999 999999999999999999999987 99987754 88999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
||||+..+|+.+|+++||.+||+++++... .+....+++.+.++.++.+++..
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~----~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPL----PDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCC----CCCccCCceEEcCHHHHHHHHhh
Confidence 999999888899999999999999754333 11124799999999999998864
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-25 Score=176.80 Aligned_cols=186 Identities=12% Similarity=0.097 Sum_probs=129.3
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHH-HhcCCCcccCc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFE-RQGLDRLQIMP 146 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p 146 (280)
+|+|+|||||||+|....+..++++. |.+........+...................+. ...+. ..+.....++|
T Consensus 2 ~k~viFDlDGTLiD~~~~~~~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p 77 (197)
T PHA02597 2 KPTILTDVDGVLLSWQSGLPYFAQKY-NIPTDHILKMIQDERFRDPGELFGCDQELAKKL---IEKYNNSDFIRYLSAYD 77 (197)
T ss_pred CcEEEEecCCceEchhhccHHHHHhc-CCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHH---hhhhhHHHHHHhccCCC
Confidence 69999999999999777776677665 776432222233222222222222222222222 22222 22334567999
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc------ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT------FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~------fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
|+.++|+.|++. ++++++||.........++.+++. |+.+++++.. ||||+.|..+++++| |++++|||
T Consensus 78 G~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~--~~kp~~~~~a~~~~~--~~~~v~vg 152 (197)
T PHA02597 78 DALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD--ESKEKLFIKAKEKYG--DRVVCFVD 152 (197)
T ss_pred CHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC--cccHHHHHHHHHHhC--CCcEEEeC
Confidence 999999999997 578888998766666566777664 4566666553 677899999999999 88999999
Q ss_pred CCchhhHHHHHHc--CCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH
Q 023578 221 DSLKDDVACGKRA--GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270 (280)
Q Consensus 221 Ds~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~ 270 (280)
|+. .|+.+|+++ |+.+|++++ +.. .....+++.+.|+.|+..
T Consensus 153 Ds~-~di~aA~~a~~Gi~~i~~~~----~~~---~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 153 DLA-HNLDAAHEALSQLPVIHMLR----GER---DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred CCH-HHHHHHHHHHcCCcEEEecc----hhh---ccccchhhhhccHHHHhc
Confidence 999 999999999 999999974 332 113477799999999863
|
2 hypothetical protein; Provisional |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=174.98 Aligned_cols=170 Identities=19% Similarity=0.210 Sum_probs=120.7
Q ss_pred cEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHH--------Hh-------c----CCChhhH----HHH-hhccC
Q 023578 69 RGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRV--------KA-------E----NPTGIDI----LHH-IESWS 120 (280)
Q Consensus 69 k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~--------~~-------~----~~~~~~~----~~~-~~~~~ 120 (280)
|+|+||+||||+|+...+..++++++ |.+. .... +. . +....++ ... +....
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 58999999999999998888777765 5542 1111 00 0 2122111 111 11111
Q ss_pred hhHHHHHHHHHHHHHHhcC--CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCC
Q 023578 121 PDLQRHAYQTIADFERQGL--DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPY 195 (280)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~ 195 (280)
.............+.+.+. ....++||+.++|+.|+++|++++|+||+... ++..++.+|+. |+.+++++ .+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~ 159 (203)
T TIGR02252 81 VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAE 159 (203)
T ss_pred CCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCC
Confidence 0111122222333332221 33578999999999999999999999998765 47788999987 89888754 7889
Q ss_pred CCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 196 Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
||+|++|..+++++|++|++|++|||+..+|+++|+++|+.+|+
T Consensus 160 KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 160 KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 99999999999999999999999999964699999999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=174.00 Aligned_cols=167 Identities=22% Similarity=0.328 Sum_probs=125.8
Q ss_pred EEEeCCCcccCCCCCHHHHHHHHh----CCch-HHHHHh-cCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCccc
Q 023578 71 VVFDMDGTLTVPVIDFPAMYRAVL----GEDE-YKRVKA-ENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQI 144 (280)
Q Consensus 71 iiFD~DGTL~d~~~~~~~~~~~~~----g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (280)
|+||+||||+|+...+.+++...+ +.+. ...++. .+....+....+............+.+.++ .......+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 78 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGIDPEEIQELFREY--NLESKLQP 78 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHGGEEE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchhHHHHHHHhhhh--hhhhccch
Confidence 799999999998876666665532 4433 222222 222333333333222222222222333333 12356789
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcC
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGD 221 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGD 221 (280)
+||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||+++.|+.+++++|++|++|++|||
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD 158 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGD 158 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEES
T ss_pred hhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeC
Confidence 999999999999999999999999999999999999998 89988765 788999999999999999999999999999
Q ss_pred CchhhHHHHHHcCCcEEEE
Q 023578 222 SLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 222 s~~~Di~~a~~~G~~~i~v 240 (280)
+. .|+++|+++|+.+|+|
T Consensus 159 ~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 159 SP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SH-HHHHHHHHTTSEEEEE
T ss_pred CH-HHHHHHHHcCCeEEeC
Confidence 99 9999999999999986
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-24 Score=207.67 Aligned_cols=199 Identities=19% Similarity=0.205 Sum_probs=149.0
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhc---cChhHHHHHH-HHHHHHH
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIES---WSPDLQRHAY-QTIADFE 135 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~ 135 (280)
.+++|+|+|||||||+|+...+.+++.+++ |.+. .......+....+....+.. +.....+... ...+.+.
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 151 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYL 151 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 346899999999999999998877777665 5543 22333455555554443321 1111111211 1222222
Q ss_pred HhcC--CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 136 RQGL--DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 136 ~~~~--~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
+.+. ....++||+.++|++|+++|++++|+||.....++..++++|+. |+.+++++ ....||+|++|..+++++
T Consensus 152 ~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l 231 (1057)
T PLN02919 152 EKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231 (1057)
T ss_pred HHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence 2211 12347999999999999999999999999999999999999984 89998876 678899999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
|++|++|++|||+. .|+++|+++||.+|++.+. +...++. ..+++++++++.|+
T Consensus 232 gv~p~e~v~IgDs~-~Di~AA~~aGm~~I~v~~~--~~~~~L~--~~~a~~vi~~l~el 285 (1057)
T PLN02919 232 GVPTSECVVIEDAL-AGVQAARAAGMRCIAVTTT--LSEEILK--DAGPSLIRKDIGNI 285 (1057)
T ss_pred CcCcccEEEEcCCH-HHHHHHHHcCCEEEEECCC--CCHHHHh--hCCCCEEECChHHC
Confidence 99999999999999 9999999999999999863 2333333 36899999999995
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=175.21 Aligned_cols=172 Identities=15% Similarity=0.111 Sum_probs=118.0
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCc---hHHHHH-hcCCChhhHHHHhhccChhHHHHHHHHHHH----------
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGED---EYKRVK-AENPTGIDILHHIESWSPDLQRHAYQTIAD---------- 133 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 133 (280)
+|+|+||+||||+|+.. ....|...++.. ...... ..+.......+.+.. .....+.....+.+
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 79 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLKDFIVTVNITGPDFNPWARTFER-GELTAEAFDGLFRHEYGLRLGHDV 79 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCccHHHHHHhcCCCCChHHHHHHc-CCCCHHHHHHHHHHHhccccCCCc
Confidence 68999999999999866 666777665443 221122 223332222222211 11111111111111
Q ss_pred ----HHHh-cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHH--HHHHHHHcCCc--ccceeeCC-CCCCCCChHHHH
Q 023578 134 ----FERQ-GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA--VDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLL 203 (280)
Q Consensus 134 ----~~~~-~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~--~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~ 203 (280)
+... ......++||+.++|+.|+++|++++|+||+.... ....+..+++. |+.+++++ .+..||+|++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~ 159 (211)
T TIGR02247 80 RIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQ 159 (211)
T ss_pred CchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHH
Confidence 1111 11346789999999999999999999999986543 22233445654 89888754 778999999999
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
.+++++|++|++|+||||+. .|+.+|+++|+.+|++.+
T Consensus 160 ~~~~~~g~~~~~~l~i~D~~-~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 160 LMLERLGVAPEECVFLDDLG-SNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHcCCCHHHeEEEcCCH-HHHHHHHHcCCEEEEECC
Confidence 99999999999999999999 999999999999999873
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-24 Score=169.84 Aligned_cols=129 Identities=22% Similarity=0.245 Sum_probs=104.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCcccceeeC------CCCCCCCCh
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGITFSPALSR------EFRPYKPDP 199 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~fd~v~~~------~~~~~Kp~~ 199 (280)
.+.++||+.++|++|+++|++++|+||... ..+...++.+|+.|+.++.+ +.+..||+|
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p 106 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKP 106 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCH
Confidence 346899999999999999999999999862 33455677788777776542 246789999
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCC--CEEEcCHHHHHHHHHh
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQP--DFRVSSLTEVLSILEA 274 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--d~v~~~~~dl~~~l~~ 274 (280)
++|..+++++|++|++|++|||+. +|+.+|+++|+.++++..+ ....... ...+ +++++++.++.+++..
T Consensus 107 ~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g--~~~~~~~--~~~~~~~~ii~~l~el~~~l~~ 178 (181)
T PRK08942 107 GMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTG--KGVTTLA--EGAAPGTWVLDSLADLPQALKK 178 (181)
T ss_pred HHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCC--CCchhhh--cccCCCceeecCHHHHHHHHHh
Confidence 999999999999999999999999 9999999999999998742 2221222 2345 9999999999998764
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.9e-24 Score=167.99 Aligned_cols=124 Identities=20% Similarity=0.221 Sum_probs=101.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCcccceeeC------------CCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGITFSPALSR------------EFR 193 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~fd~v~~~------------~~~ 193 (280)
...++||+.++|++|+++|++++|+||... ..+...++.+++.|+.++.+ +..
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 103 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQVCD 103 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccCCCC
Confidence 446899999999999999999999999874 34456677777777776542 344
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
.+||+|++|..+++++|+++++|+||||+. +|+++|+++|+.+ +++.+ +..........++++++++.||.
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~----g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRT----GKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEec----CCcccccccccCCEEeccHHHhh
Confidence 689999999999999999999999999999 9999999999998 78874 22222221357999999999986
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-24 Score=168.13 Aligned_cols=160 Identities=19% Similarity=0.187 Sum_probs=115.7
Q ss_pred EEEEeCCCcccCCCCCHHHHHHHHh--------CCchHHH--HH-----hcCCChhhHHHHhhccChhHHHHHHHHHHHH
Q 023578 70 GVVFDMDGTLTVPVIDFPAMYRAVL--------GEDEYKR--VK-----AENPTGIDILHHIESWSPDLQRHAYQTIADF 134 (280)
Q Consensus 70 ~iiFD~DGTL~d~~~~~~~~~~~~~--------g~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (280)
+|+||+||||+|+...+..++.+.+ |.+.... .+ ..+......... ..... +...+ .+
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~---~~~~~---~~ 74 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDA---DEYLR---YV 74 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCH---HHHHH---HH
Confidence 6999999999999887777766532 4443211 11 112111111111 01111 11111 11
Q ss_pred HH-hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCC----CCCChHHHHHHH
Q 023578 135 ER-QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRP----YKPDPGPLLHIC 206 (280)
Q Consensus 135 ~~-~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~----~Kp~~~~~~~~~ 206 (280)
.+ .......++||+.++|+.|+ ++++++||+....+...++.+|+. |+.+++++ .+. .||+|++|+.++
T Consensus 75 ~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~ 151 (184)
T TIGR01993 75 HGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKAL 151 (184)
T ss_pred hccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHH
Confidence 11 11134568999999999998 479999999999999999999997 99998876 444 599999999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v 240 (280)
+++|++|+++++|||+. .|+++|+++|+.+|+|
T Consensus 152 ~~~~~~~~~~l~vgD~~-~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 152 REAGVDPERAIFFDDSA-RNIAAAKALGMKTVLV 184 (184)
T ss_pred HHhCCCccceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence 99999999999999999 9999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=164.46 Aligned_cols=97 Identities=25% Similarity=0.412 Sum_probs=89.4
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
..++||+.++|+.|+++|++++++||+.... .....++|+. |+.+++++ .+..||+|+.|+.+++++|++|++|++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 6899999999999999999999999999888 6666668987 89988754 788999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEE
Q 023578 219 VGDSLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v 240 (280)
|||+. .|+++|+++|+.+|+|
T Consensus 163 vgD~~-~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 163 VDDSP-AGIEAAKAAGMHTVLV 183 (183)
T ss_pred EcCCH-HHHHHHHHcCCEEEeC
Confidence 99999 9999999999999874
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.6e-23 Score=166.79 Aligned_cols=188 Identities=19% Similarity=0.274 Sum_probs=126.2
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHhCCchH-HHH-Hh--cCC-ChhhHH-HHhhccChhHHHHHHHHHHHHHHhc
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEY-KRV-KA--ENP-TGIDIL-HHIESWSPDLQRHAYQTIADFERQG 138 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~-~~~-~~--~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
.+++|+++||+||||+++.. +....+.. |.+.. ... .. .+. ...... +.+..+..... +..+..
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~-~~~l~~~~-g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 80 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET-IDEIAKIA-GVEEEVSEITERAMRGELDFKASLRERVALLKGLPV--------ELLKEV 80 (219)
T ss_pred hccCCEEEEeCcccCCCchH-HHHHHHHh-CCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCH--------HHHHHH
Confidence 34579999999999998753 34444444 66431 111 11 111 111111 11111111111 111222
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc-------ceeeC----CCCCCCCChHHHHHH
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS-------PALSR----EFRPYKPDPGPLLHI 205 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd-------~v~~~----~~~~~Kp~~~~~~~~ 205 (280)
.....+.||+.++++.|+++|++++|+||+....++.+++.+|+. |. ..+++ ....++|++..++.+
T Consensus 81 ~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 81 RENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred HhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 234578999999999999999999999999999999999999987 42 22222 223457789999999
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHH
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSIL 272 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l 272 (280)
++++|+++++|+||||+. +|+.+|+++|+.+++ + +...+++ .+++++. ++.++..+|
T Consensus 161 ~~~~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~~-~-----~~~~~~~---~a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGA-NDLSMIKAAGLGIAF-N-----AKPKLQQ---KADICINKKDLTDILPLL 219 (219)
T ss_pred HHHcCCCHHHEEEEECCH-HHHHHHHhCCCeEEe-C-----CCHHHHH---hchhccCCCCHHHHHhhC
Confidence 999999999999999999 999999999998654 2 2223333 7888876 667777653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-23 Score=168.43 Aligned_cols=190 Identities=19% Similarity=0.245 Sum_probs=134.0
Q ss_pred CCCcccCCCCCHHHHHHHHh---CCch-HHHHH-hcCCChhhHHHHhhc---cChh-HHHHHHHHHHHHHHhcCCCcccC
Q 023578 75 MDGTLTVPVIDFPAMYRAVL---GEDE-YKRVK-AENPTGIDILHHIES---WSPD-LQRHAYQTIADFERQGLDRLQIM 145 (280)
Q Consensus 75 ~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~~-~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 145 (280)
|||||+|+...+..+|.+++ |.+. ..... ..+.........+.. .... ..+........+.........++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 79999999998888887776 5443 22222 345555444444321 2211 12222233333333333456789
Q ss_pred cCHHHHHHHhhhCCCeEEEEeCCchHHHHH-HHHHcCCc--ccceeeCC---CCCCCCChHHHHHHHHhcC---CCCCcE
Q 023578 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDL-FHNRFGIT--FSPALSRE---FRPYKPDPGPLLHICSTWE---VQPNEV 216 (280)
Q Consensus 146 pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~-~l~~~g~~--fd~v~~~~---~~~~Kp~~~~~~~~~~~lg---i~~~~~ 216 (280)
||+.++|+.|+++|++++|+||........ ..+..++. |+.+++++ .+..||+|++|..+++++| ++|++|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ 160 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV 160 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence 999999999999999999999988765543 33334554 78888865 5578999999999999997 999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~ 270 (280)
+||||+. .|+++|+++|+.+|++.++ ...... ...++++++++.|+..
T Consensus 161 v~IgDs~-~di~aA~~aG~~~i~v~~~--~~~~~~---~~~~d~vi~~~~e~~~ 208 (220)
T PLN02811 161 LVFEDAP-SGVEAAKNAGMSVVMVPDP--RLDKSY---CKGADQVLSSLLDFKP 208 (220)
T ss_pred EEEeccH-hhHHHHHHCCCeEEEEeCC--CCcHhh---hhchhhHhcCHhhCCH
Confidence 9999999 9999999999999999752 211122 2378999999988543
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=162.98 Aligned_cols=164 Identities=18% Similarity=0.227 Sum_probs=116.9
Q ss_pred cEEEEeCCCcccCCCCCHHHHHHHHh---C-Cch-HHHHHh-cCCCh---------hhHHHHhhcc------ChhHHHHH
Q 023578 69 RGVVFDMDGTLTVPVIDFPAMYRAVL---G-EDE-YKRVKA-ENPTG---------IDILHHIESW------SPDLQRHA 127 (280)
Q Consensus 69 k~iiFD~DGTL~d~~~~~~~~~~~~~---g-~~~-~~~~~~-~~~~~---------~~~~~~~~~~------~~~~~~~~ 127 (280)
++|+|||||||+|+...+..++++.+ | .+. ...+.. .+.+. ......+... .....+.+
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 36999999999999998888777776 3 222 222221 22111 1122222111 12233344
Q ss_pred HHHHHHHHHhcC----------CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCC
Q 023578 128 YQTIADFERQGL----------DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPY 195 (280)
Q Consensus 128 ~~~~~~~~~~~~----------~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~ 195 (280)
...+.+++.... ....+.++..++|+.|+++|++++|+||+....++..++.+|+. |+.+++++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~ 160 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP 160 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC
Confidence 444444433211 12245566799999999999999999999999999999999998 898888774333
Q ss_pred CCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc
Q 023578 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 196 Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
||+|+.+..+++++|+++++|++|||+. +|+++|+++
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~-~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTV-DDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCH-HHHHHHHhC
Confidence 9999999999999999999999999999 999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=162.56 Aligned_cols=99 Identities=10% Similarity=0.175 Sum_probs=88.4
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-cCCc--ccceeeC-CCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-FGIT--FSPALSR-EFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~g~~--fd~v~~~-~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
.++||+.++|+.|+++|++++|+||+.....+..+.. .++. |+.++++ +.+.+||+|++|+.+++++|++|++|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 5899999999999999999999999988776655544 3554 8888775 4889999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcC
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|||+. .|+.+|+++|+.++++.+
T Consensus 164 vgD~~-~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 164 FDDNA-DNIEAANALGITSILVTD 186 (199)
T ss_pred eCCCH-HHHHHHHHcCCEEEEecC
Confidence 99999 999999999999999875
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=158.99 Aligned_cols=129 Identities=17% Similarity=0.281 Sum_probs=100.6
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchH--------HHHHHHHHcCCc--cccee-eCC-CCCCCCChHHHHHHHHh
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKE--------AVDLFHNRFGIT--FSPAL-SRE-FRPYKPDPGPLLHICST 208 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~--------~~~~~l~~~g~~--fd~v~-~~~-~~~~Kp~~~~~~~~~~~ 208 (280)
...++||+.++|++|+++|++++|+||.... .....++.+|+. |.... +++ ....||+|++|..++++
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3468999999999999999999999997641 123346677764 22221 222 46789999999999999
Q ss_pred cCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc-----cccccCCCCCCEEEcCHHHHHHHH
Q 023578 209 WEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSA-----DDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 209 lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~-----~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+|++|++|+||||+. +|+.+|+++|+.+|++.++..... .+.. ...++++++++.|+.++|
T Consensus 106 l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~--~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 106 HGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGAGYDALHTYRDKWA--HIEPNYIAENFEDAVNWI 171 (173)
T ss_pred cCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCCCchhhhhhhcccc--cCCCcchhhCHHHHHHHH
Confidence 999999999999999 999999999999999986332211 1111 357999999999998875
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=155.29 Aligned_cols=147 Identities=26% Similarity=0.419 Sum_probs=108.4
Q ss_pred EEEEeCCCcccCCCCCHHHHHHHHh---CCchHHHHH-hcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccC
Q 023578 70 GVVFDMDGTLTVPVIDFPAMYRAVL---GEDEYKRVK-AENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIM 145 (280)
Q Consensus 70 ~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (280)
+|+||+||||+|+...+..++.+.+ |... ..++ ..+. ...........++++.. +......+
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~-~~~~~~~~ 66 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDF-QALKALRGL------------AEELLYRIATSFEELLG-YDAEEAYI 66 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcccH-HHHHHHHcc------------ChHHHHHHHHHHHHHhC-cchhheec
Confidence 4899999999999887777776664 3221 1111 1111 11111111111222221 22345678
Q ss_pred cCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 146 pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
||+.++++.|+++|++++++||+....+...++.+ +. |+.+++.+ .+ +||+|++|..+++++|+++ +|++|||+
T Consensus 67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs 143 (154)
T TIGR01549 67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDN 143 (154)
T ss_pred cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCC
Confidence 99999999999999999999999999999988886 44 88888866 55 9999999999999999999 99999999
Q ss_pred chhhHHHHHHcC
Q 023578 223 LKDDVACGKRAG 234 (280)
Q Consensus 223 ~~~Di~~a~~~G 234 (280)
. .|+++|+++|
T Consensus 144 ~-~Di~aa~~aG 154 (154)
T TIGR01549 144 L-NDIEGARNAG 154 (154)
T ss_pred H-HHHHHHHHcc
Confidence 9 9999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=151.95 Aligned_cols=98 Identities=23% Similarity=0.345 Sum_probs=88.1
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCc--------hHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhc-CCC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNI--------KEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTW-EVQ 212 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~--------~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~l-gi~ 212 (280)
..++||+.++|+.|+++|++++++||+. ...++..++.+|+.++.++.+. ...||+|+.|+.+++++ +++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP-HCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC-CCCCCChHHHHHHHHHcCCCC
Confidence 3689999999999999999999999998 7788889999999855544444 67799999999999999 599
Q ss_pred CCcEEEEcC-CchhhHHHHHHcCCcEEEEc
Q 023578 213 PNEVMMVGD-SLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 213 ~~~~v~iGD-s~~~Di~~a~~~G~~~i~v~ 241 (280)
|++++|||| +. .|+.+|+++|+.+|+++
T Consensus 103 ~~~~v~IGD~~~-~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDL-TDLQAAKRAGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCc-ccHHHHHHCCCeEEEee
Confidence 999999999 68 99999999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=154.06 Aligned_cols=100 Identities=22% Similarity=0.317 Sum_probs=85.9
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCcccc-eee----CC-CCCCCCChH
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGITFSP-ALS----RE-FRPYKPDPG 200 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~fd~-v~~----~~-~~~~Kp~~~ 200 (280)
..++||+.++|+.|+++|++++|+||+.. ..+...++.+|+.++. +++ ++ .+..||+|+
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 36899999999999999999999999873 4566778899987332 222 23 456799999
Q ss_pred HHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 201 PLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 201 ~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|+.+++++|+++++|+||||+. .|+++|+++|+.+|++++
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~-~Di~~A~~~Gi~~v~i~~ 146 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRL-RDLQAARNAGLAAVLLVD 146 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCH-HHHHHHHHCCCCEEEecC
Confidence 99999999999999999999998 999999999999999974
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=159.00 Aligned_cols=190 Identities=17% Similarity=0.253 Sum_probs=125.0
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCch-H-HHHHh-cC--CChhhHHHH-hhccChhHHHHHHHHHHHHHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDE-Y-KRVKA-EN--PTGIDILHH-IESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~-~-~~~~~-~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
++|+|+|||||||+|+.. +....+.. |.+. . ..... .+ ....+.+.. +..+.. .. +....+.+..
T Consensus 11 ~~k~viFDfDGTL~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~-- 81 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEG-IDELAEFC-GAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP-SL----SQVEEFLEKR-- 81 (224)
T ss_pred cCCEEEEeCCCcccchHH-HHHHHHHc-CChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC-CH----HHHHHHHHHc--
Confidence 479999999999998733 34444444 6643 1 11211 11 222222222 222221 11 1122222221
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----ccc--------eee-CC----CCCCCCChHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSP--------ALS-RE----FRPYKPDPGPLL 203 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~--------v~~-~~----~~~~Kp~~~~~~ 203 (280)
...++||+.++++.|+++|++++|+|++....++.+++.+|+. |.. .+. .+ ....++|+..++
T Consensus 82 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 82 PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 3468999999999999999999999999999999999999985 221 111 11 123567889999
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
.+++++|. +++++|||+. +|+.+++++|+.++.... + +...+.. ...+++++.++.++.+++
T Consensus 162 ~~~~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~~~-~-~~~~~~~--~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGA-TDLEARKPGGADLFIGYG-G-VQVREAV--AAKADWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEecC-C-CccCHHH--HhcCCEEECCHHHHHHhh
Confidence 99999885 6899999999 999999998887665432 1 1111211 357999999999998875
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=154.65 Aligned_cols=197 Identities=21% Similarity=0.239 Sum_probs=153.7
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhcc--ChhHHHHHHHHHHHHHHhc
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESW--SPDLQRHAYQTIADFERQG 138 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 138 (280)
..+.+++||+||||+|+...+.+++++++ |.+. ....+..|....+..+.+-.+ .+...+++....+......
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~~ 87 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDRL 87 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHh
Confidence 34789999999999999999999888887 4433 344445777777777766422 3344555555555666666
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcC-Cc--ccceeeC---CCCCCCCChHHHHHHHHhcCCC
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFG-IT--FSPALSR---EFRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g-~~--fd~v~~~---~~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
.....+.||+..+++.|+.+|++++++|+..+...+...++++ +. |..++.+ ++..+||+|++|..+++.+|..
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~ 167 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVP 167 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCC
Confidence 7788899999999999999999999999998888888888777 33 6665553 3678999999999999999998
Q ss_pred C-CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 213 P-NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 213 ~-~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
| +.|++++|++ ..+++|+++||.+|++.+ .. ........+++++.++.+.
T Consensus 168 ~~~k~lVfeds~-~Gv~aa~aagm~vi~v~~---~~--~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 168 PPSKCLVFEDSP-VGVQAAKAAGMQVVGVAT---PD--LSNLFSAGATLILESLEDF 218 (222)
T ss_pred CccceEEECCCH-HHHHHHHhcCCeEEEecC---CC--cchhhhhccceeccccccc
Confidence 8 9999999999 999999999999999985 11 1111245777777776653
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=165.28 Aligned_cols=190 Identities=17% Similarity=0.207 Sum_probs=127.7
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHhCCchH-H-HHHhcCCChhhHHHH----hhccChhHHHHHHHHHHHHHHhc
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEY-K-RVKAENPTGIDILHH----IESWSPDLQRHAYQTIADFERQG 138 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
...+++++|||||||+.. ..+.+..+.. |.... . ..........+..+. +..+.... ....+..
T Consensus 107 ~~~~~LvvfDmDGTLI~~-e~i~eia~~~-g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~--------~~il~~v 176 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI-ECIDEIAKLA-GTGEEVAEVTERAMRGELDFEASLRQRVATLKGAD--------ANILQQV 176 (322)
T ss_pred ccCCCEEEEECCCCCcch-HHHHHHHHHh-CCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCC--------HHHHHHH
Confidence 456899999999999932 3344444433 65441 1 111111111222211 11111110 0111222
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c-------cceee----CCCCCCCCChHHHHHH
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F-------SPALS----REFRPYKPDPGPLLHI 205 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f-------d~v~~----~~~~~~Kp~~~~~~~~ 205 (280)
....++.||+.++++.|+++|++++|+|++...+.+.+.+++|++ + +..++ ++...+|||++.++.+
T Consensus 177 ~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 177 RENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred HHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 235679999999999999999999999999999999999999976 1 22232 2334678999999999
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHHh
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILEA 274 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~~ 274 (280)
++++|+++++|++|||+. ||+.|++.+|+.+++ + +.+..+ ..++++++ ++..++-++..
T Consensus 257 a~~lgi~~~qtIaVGDg~-NDl~m~~~AGlgiA~-n-----Akp~Vk---~~Ad~~i~~~~l~~~l~~~~~ 317 (322)
T PRK11133 257 AQEYEIPLAQTVAIGDGA-NDLPMIKAAGLGIAY-H-----AKPKVN---EQAQVTIRHADLMGVLCILSG 317 (322)
T ss_pred HHHcCCChhhEEEEECCH-HHHHHHHHCCCeEEe-C-----CCHHHH---hhCCEEecCcCHHHHHHHhcc
Confidence 999999999999999999 999999999998876 3 233343 48888887 45556555543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=151.86 Aligned_cols=112 Identities=16% Similarity=0.222 Sum_probs=96.0
Q ss_pred HHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc---CCc--ccceeeCCCCCCCCChHHHHHH
Q 023578 131 IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF---GIT--FSPALSREFRPYKPDPGPLLHI 205 (280)
Q Consensus 131 ~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~---g~~--fd~v~~~~~~~~Kp~~~~~~~~ 205 (280)
+.+.+........++||+.++|++|+++|++++|+||++...++..++.. ++. |+.++....+ .||+|+.|..+
T Consensus 83 w~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g-~KP~p~~y~~i 161 (220)
T TIGR01691 83 WRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVG-LKTEAQSYVKI 161 (220)
T ss_pred HHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcc-cCCCHHHHHHH
Confidence 55555555566789999999999999999999999999998888888775 343 6666654333 69999999999
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~ 244 (280)
++++|++|++|+||||+. .|+++|+++||.++++.+++
T Consensus 162 ~~~lgv~p~e~lfVgDs~-~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 162 AGQLGSPPREILFLSDII-NELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHhCcChhHEEEEeCCH-HHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999 99999999999999998755
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=157.52 Aligned_cols=169 Identities=15% Similarity=0.156 Sum_probs=110.8
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchH-HH---HHhcCC-ChhhHHHHh-hccChhHHHHHHHHHHHHHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEY-KR---VKAENP-TGIDILHHI-ESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~-~~---~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
++|+|+||+||||+|+...+... ...+|.... .. ....+. ......... ..+.... .....+.......
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 77 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYL-HRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRS----GRLRREEVEEIFK 77 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHH-HHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcc----cCCCHHHHHHHHH
Confidence 47999999999999977555433 333365531 11 111111 111111110 0000000 0001111222234
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceee-CCCCCCC----------CChHHHHHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALS-REFRPYK----------PDPGPLLHICS 207 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~-~~~~~~K----------p~~~~~~~~~~ 207 (280)
...++||+.++|+.|+++|++++|+||+....++.+++.+|+. |...+. .+.+..+ +++..+..+++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 5679999999999999999999999999999999999999987 443332 2333222 33468889999
Q ss_pred hcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 208 ~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
++|+++++++||||+. +|+++|+++|+.++...
T Consensus 158 ~~~~~~~~~i~iGDs~-~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 158 ELNPSLTETVAVGDSK-NDLPMFEVADISISLGD 190 (201)
T ss_pred HhCCCHHHEEEEcCCH-hHHHHHHhcCCeEEECC
Confidence 9999999999999999 99999999999777643
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=148.76 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=90.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCC---------------chHHHHHHHHHcCCccccee-e-----CCCCCCCCCh
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRN---------------IKEAVDLFHNRFGITFSPAL-S-----REFRPYKPDP 199 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~---------------~~~~~~~~l~~~g~~fd~v~-~-----~~~~~~Kp~~ 199 (280)
...++||+.++|++|+++|++++|+||. ....+..+++.+|+.|+.++ | .+...+||++
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~ 106 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKI 106 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCH
Confidence 4578999999999999999999999996 34567888999999987654 4 3467889999
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
.+++.+++++|+++++++||||+. +|+++|+++|+.++++.+
T Consensus 107 ~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 107 KLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEECh
Confidence 999999999999999999999999 999999999999999984
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-21 Score=155.08 Aligned_cols=194 Identities=15% Similarity=0.180 Sum_probs=128.8
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHh----cCCChhhHH-HHhhccChhHHHHHHHHHHHHHHhcCCCc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKA----ENPTGIDIL-HHIESWSPDLQRHAYQTIADFERQGLDRL 142 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
-++|+||+||||+++...+ ...++. +-+....+.. ......+.. ..+..+.....+... +.+....
T Consensus 3 ~~~vifDfDgTi~~~d~~~-~~~~~~-~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~ 73 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNII-AIMKKF-APPEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEII-------QFLLETA 73 (219)
T ss_pred CcEEEEcCCCCCCcchhhH-HHHHHh-CHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHH-------HHHHhCC
Confidence 4689999999999888765 344444 3222222211 111222222 222223222211211 1122456
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccce------eeCC-CCCCCCChHH----------HHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPA------LSRE-FRPYKPDPGP----------LLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v------~~~~-~~~~Kp~~~~----------~~~~ 205 (280)
.++||+.++++.|+++|++++|+||+...+++.+++.+ +..+.+ ++++ ....||.|.. ...+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 89999999999999999999999999999999999987 542223 3333 3456776653 3578
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccCC
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDL 278 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~~ 278 (280)
+++++.++++|+||||+. +|+.+|+++|+.++ .+ .......+ ...+.+.++++.|+.+.|+++.+.
T Consensus 153 l~~~~~~~~~~i~iGDs~-~Di~aa~~Ag~~~a--~~---~l~~~~~~-~~~~~~~~~~f~ei~~~l~~~~~~ 218 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSI-TDLEAAKQADKVFA--RD---FLITKCEE-LGIPYTPFETFHDVQTELKHLLEV 218 (219)
T ss_pred HHHhccCCCCEEEEeCCH-HHHHHHHHCCccee--HH---HHHHHHHH-cCCCccccCCHHHHHHHHHHHhcc
Confidence 899999999999999999 99999999999443 21 11111111 346788899999999999887654
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-22 Score=155.55 Aligned_cols=86 Identities=27% Similarity=0.406 Sum_probs=78.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++|+ +++|+||+....++..++++|+. |+.+++++ .+..||+|+.|+.+++++|++|++|
T Consensus 87 ~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 87 KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 35679999999998 38899999999999999999998 89888876 6889999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHc
Q 023578 217 MMVGDSLKDDVACGKRA 233 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~ 233 (280)
++|||+. +|+.+|+++
T Consensus 160 l~vgD~~-~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQ-WDLIGARKF 175 (175)
T ss_pred EeEecCh-hhHHHHhcC
Confidence 9999999 999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-21 Score=152.17 Aligned_cols=101 Identities=24% Similarity=0.338 Sum_probs=91.7
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceee-CCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALS-REFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~-~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...+.+++.++++.||+.|..++++||.... .+..+..+|+. ||.++. ++.+..||+|.+|+.+++++|+.|++|+
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~v 189 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECV 189 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeE
Confidence 5567888899999999999999999998865 45788888987 998664 7799999999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|||+..||+++|+++||.++.|.+
T Consensus 190 hIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 190 HIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred EecCccccccHhHHHcCCEEEEEcc
Confidence 9999999999999999999999985
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=146.68 Aligned_cols=191 Identities=16% Similarity=0.196 Sum_probs=120.1
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHH-HhhccChhHHHHHHHHHHHHHHhcCCCcccCc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILH-HIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (280)
+|+|+|||||||++ ..|....++. |.+................. .+..+... ....+-.........++|
T Consensus 1 ~~~v~FD~DGTL~~--~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~i~~~~~~~~~~p 71 (205)
T PRK13582 1 MEIVCLDLEGVLVP--EIWIAFAEKT-GIPELRATTRDIPDYDVLMKQRLDILDEH------GLGLADIQEVIATLDPLP 71 (205)
T ss_pred CeEEEEeCCCCChh--hHHHHHHHHc-CChHHHHHhcCCCCHHHHHHHHHHHHHHc------CCCHHHHHHHHHhCCCCC
Confidence 37899999999994 2555444444 76553221111111111111 11110000 000011122224567899
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeC--C---CCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSR--E---FRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~--~---~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
|+.++|+.|+++ ++++|+||+....++..++++|+. |+..+.. + .+..+++|.....++++++..+++|++|
T Consensus 72 g~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~~v~i 150 (205)
T PRK13582 72 GAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYRVIAA 150 (205)
T ss_pred CHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCeEEEE
Confidence 999999999999 999999999999999999999987 4433221 1 1122334455567777777778999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCE-EEcCHHHHHHHHHhccC
Q 023578 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDF-RVSSLTEVLSILEANFD 277 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~-v~~~~~dl~~~l~~~~~ 277 (280)
||+. +|+.+++++|+.+. ++ +.. ... ...+++ +++++.||.+++.+...
T Consensus 151 GDs~-~D~~~~~aa~~~v~-~~----~~~-~~~--~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 151 GDSY-NDTTMLGEADAGIL-FR----PPA-NVI--AEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred eCCH-HHHHHHHhCCCCEE-EC----CCH-HHH--HhCCcccccCCHHHHHHHHHHHHh
Confidence 9999 99999999998654 33 221 111 124454 89999999999887643
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-20 Score=144.65 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=83.5
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchH------------HHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcC
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKE------------AVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~------------~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lg 210 (280)
++||+.++|+.|+++|++++|+||+... .++.+++.+|+.++.+++++ ...+||+|+++..+++++|
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~~~~~~KP~p~~~~~~~~~~~ 122 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATHAGLYRKPMTGMWEYLQSQYN 122 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCccHHHHHHHHHcC
Confidence 6899999999999999999999997753 46778899999865566554 4468999999999999999
Q ss_pred --CCCCcEEEEcCCc-------hhhHHHHHHcCCcEEE
Q 023578 211 --VQPNEVMMVGDSL-------KDDVACGKRAGAFTCL 239 (280)
Q Consensus 211 --i~~~~~v~iGDs~-------~~Di~~a~~~G~~~i~ 239 (280)
+++++++||||+. .+|+++|+++|+.+++
T Consensus 123 ~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 123 SPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 9999999999985 2599999999999865
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=145.52 Aligned_cols=149 Identities=14% Similarity=0.094 Sum_probs=108.0
Q ss_pred EEEEeCCCcccCCCCCHHHHHHHHhCCchHH--HHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCcC
Q 023578 70 GVVFDMDGTLTVPVIDFPAMYRAVLGEDEYK--RVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPG 147 (280)
Q Consensus 70 ~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg 147 (280)
+|+||+||||+|+.+.+ . .|.+... .++... ....+..+.........+.++
T Consensus 65 aViFDlDgTLlDSs~~~-----~-~G~~~~s~~~~~~l~--------------------g~~~w~~~~~~~~~~s~p~~~ 118 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGF-----W-RGKKTFSPGSEDYLK--------------------NQVFWEKVNNGWDEFSIPKEV 118 (237)
T ss_pred EEEEeCCCccccCcHHH-----h-CCcccCCHHHhhhhc--------------------ChHHHHHHHHhcccCCcchhH
Confidence 99999999999998877 1 3554311 011000 012223333333345567788
Q ss_pred HHHHHHHhhhCCCeEEEEeCC----chHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 148 TAQLCGFLDSKKIRRGLITRN----IKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 148 ~~~~l~~L~~~g~~i~ivS~~----~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
+.++|++++++|++++++||. ....++.+++.+|+. |+.+++++ ....||++. .+++++|+ ++|||
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i----~i~vG 191 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI----RIHYG 191 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC----eEEEe
Confidence 999999999999999999998 666888899999998 78888876 445677654 45677776 79999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccc
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFT 252 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~ 252 (280)
|+. +|+.+|+++|+.++.+.++.+......+
T Consensus 192 Ds~-~DI~aAk~AGi~~I~V~~g~~s~~~~~~ 222 (237)
T TIGR01672 192 DSD-NDITAAKEAGARGIRILRASNSTYKPLP 222 (237)
T ss_pred CCH-HHHHHHHHCCCCEEEEEecCCCCCCCcc
Confidence 999 9999999999999999875554444444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-19 Score=138.36 Aligned_cols=123 Identities=17% Similarity=0.190 Sum_probs=102.9
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCC-------CCCCChHHHHHHHHhcCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFR-------PYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~-------~~Kp~~~~~~~~~~~lgi 211 (280)
.++|.+...++|-.|+.++ .++.||+.+.++.++++++|+. |+++++.+.. ..||.+.+|+.+++..|+
T Consensus 98 ~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi 175 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGI 175 (244)
T ss_pred hcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCC
Confidence 3678888999999999874 8899999999999999999999 9999987622 579999999999999999
Q ss_pred C-CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 212 Q-PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 212 ~-~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
+ |.+++||+||. ++|+.|++.||.++++..... ..++++++.+..+..+.+.++
T Consensus 176 ~~p~~t~FfDDS~-~NI~~ak~vGl~tvlv~~~~~---------~~~~d~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 176 DSPRNTYFFDDSE-RNIQTAKEVGLKTVLVGREHK---------IKGVDYALEQIHNNKEALPEL 230 (244)
T ss_pred CCcCceEEEcCch-hhHHHHHhccceeEEEEeeec---------ccchHHHHHHhhchhhhchHH
Confidence 7 99999999999 999999999999999874211 136777777666655544443
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-20 Score=143.21 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=88.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCC-chHHHHHHHHHcCCc-----------ccceeeCC-CCCCCCChHHHHHHH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRN-IKEAVDLFHNRFGIT-----------FSPALSRE-FRPYKPDPGPLLHIC 206 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~-~~~~~~~~l~~~g~~-----------fd~v~~~~-~~~~Kp~~~~~~~~~ 206 (280)
....++||+.++|+.|+++|++++++||+ ....++..++.+|+. |+.+++++ ....||.+.+++.+.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 45689999999999999999999999998 888888899998863 78888865 445666677777777
Q ss_pred Hhc--CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 207 STW--EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 207 ~~l--gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+.+ |++|++|+||||+. .|+++|+++|+.++++..
T Consensus 122 ~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPS 158 (174)
T ss_pred hcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCC
Confidence 777 89999999999999 999999999999999974
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-19 Score=139.09 Aligned_cols=112 Identities=16% Similarity=0.104 Sum_probs=91.1
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
++++|+++|++++|+||.....++..++.+|+. ..+.+ .+|+++.++.+++++|+++++|+||||+. +|+.++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~ 108 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVM 108 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHH
Confidence 799999999999999999999999999999986 22222 37889999999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH---HHHHHHhccC
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE---VLSILEANFD 277 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d---l~~~l~~~~~ 277 (280)
+++|+. +.+.+ +.... +..+++++.+..+ +.+.++.++.
T Consensus 109 ~~ag~~-~~v~~----~~~~~---~~~a~~i~~~~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 109 EKVGLS-VAVAD----AHPLL---IPRADYVTRIAGGRGAVREVCELLLL 150 (154)
T ss_pred HHCCCe-EecCC----cCHHH---HHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999997 55542 22233 3478999987754 6666666544
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-19 Score=139.19 Aligned_cols=97 Identities=22% Similarity=0.222 Sum_probs=84.1
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~ 228 (280)
.++.|+++|++++|+||.....++..++.+|+. |+. .||+|+.++.+++++|+++++|++|||+. +|+.
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~ 112 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------IKKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLS 112 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------CCCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHH
Confidence 678899999999999999999999999999987 442 28999999999999999999999999999 9999
Q ss_pred HHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC
Q 023578 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS 264 (280)
Q Consensus 229 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~ 264 (280)
+++.+|+.+++-+ +..+.+ ..+++|+.+
T Consensus 113 ~~~~ag~~~am~n-----A~~~lk---~~A~~I~~~ 140 (169)
T TIGR02726 113 MMKRVGLAVAVGD-----AVADVK---EAAAYVTTA 140 (169)
T ss_pred HHHHCCCeEECcC-----chHHHH---HhCCEEcCC
Confidence 9999999888743 344444 478888764
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=130.14 Aligned_cols=96 Identities=27% Similarity=0.383 Sum_probs=88.3
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
.....|++.+.+..++++|+++.|+||+....+....+++|++| + ....||.+..|.++++++++++++|++||
T Consensus 44 ~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f--i----~~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 44 NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF--I----YRAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--e----ecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 44577899999999999999999999999999999999999763 3 45779999999999999999999999999
Q ss_pred CCchhhHHHHHHcCCcEEEEcC
Q 023578 221 DSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~ 242 (280)
|+..+|+.+++.+|+.||+|..
T Consensus 118 DqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred chhhhhhhcccccCcEEEEEEE
Confidence 9999999999999999999973
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=132.65 Aligned_cols=181 Identities=12% Similarity=0.127 Sum_probs=114.3
Q ss_pred cEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHH-Hhh-----ccChhHHHHHHHHHHHHHHhcCCCc
Q 023578 69 RGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILH-HIE-----SWSPDLQRHAYQTIADFERQGLDRL 142 (280)
Q Consensus 69 k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
++++|||||||++. .|.....+. |................... .+. +++.+.+ +......
T Consensus 2 ~la~FDlD~TLi~~--~w~~~~~~~-g~~~~~~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i-----------~~~~~~i 67 (203)
T TIGR02137 2 EIACLDLEGVLVPE--IWIAFAEKT-GIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDI-----------QEVIATL 67 (203)
T ss_pred eEEEEeCCcccHHH--HHHHHHHHc-CCcHHHHHhcCCcCHHHHHHHHHHHHHHCCCCHHHH-----------HHHHHhC
Confidence 56999999999965 355444444 65442222111111111111 000 1111111 2222355
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc--------ceeeCCCCCCCCChHHHHHHHHhcCCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS--------PALSREFRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd--------~v~~~~~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
.++||+.++++.+++++ +++|+|++...+++.+++.+|++ |. ..+++.....++.+......+++.|.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~- 145 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY- 145 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC-
Confidence 78999999999999985 99999999999999999999987 33 23333222334444444444455553
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
++++|||+. ||+.+++.+|..+++... +...+ .+.---++.+..||+..+.+.
T Consensus 146 --~~v~vGDs~-nDl~ml~~Ag~~ia~~ak------~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 146 --RVIAAGDSY-NDTTMLSEAHAGILFHAP------ENVIR-EFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred --CEEEEeCCH-HHHHHHHhCCCCEEecCC------HHHHH-hCCCCCcccCHHHHHHHHHHH
Confidence 799999999 999999999999887442 11121 233334688999999988765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.7e-18 Score=131.42 Aligned_cols=95 Identities=20% Similarity=0.294 Sum_probs=82.9
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCc-hHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNI-KEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~-~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
..++||+.++|+.|+++|++++++||+. ...++.+++.+|+.+. ....||+|++|..+++++|+++++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------~~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------PHAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------cCCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 3688999999999999999999999998 5677777788876521 13469999999999999999999999999
Q ss_pred CCchhhHHHHHHcCCcEEEEcC
Q 023578 221 DSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~ 242 (280)
|+...|+.+|+++|+.+|++++
T Consensus 116 Ds~~~Di~aA~~aGi~~i~v~~ 137 (170)
T TIGR01668 116 DRLFTDVMGGNRNGSYTILVEP 137 (170)
T ss_pred CcchHHHHHHHHcCCeEEEEcc
Confidence 9973599999999999999985
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.9e-18 Score=127.26 Aligned_cols=100 Identities=32% Similarity=0.548 Sum_probs=89.1
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCC----------------CCChH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPY----------------KPDPG 200 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~----------------Kp~~~ 200 (280)
....++|++.++++.|+++|++++++||+....++..++.+|+. ++.+++.+ .... ||++.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 45679999999999999999999999999999999999999985 67677644 2222 99999
Q ss_pred HHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 023578 201 PLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 201 ~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v 240 (280)
.+..++++++..++++++|||+. +|+++++++|+.++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence 99999999999999999999999 9999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-18 Score=144.10 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=88.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCC---------------chHHHHHHHHHcCCcccce-eeC-----CCCCCCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRN---------------IKEAVDLFHNRFGITFSPA-LSR-----EFRPYKPD 198 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~---------------~~~~~~~~l~~~g~~fd~v-~~~-----~~~~~Kp~ 198 (280)
....++||+.++|++|+++|++++|+||. ....+..+++.+|+.|+.+ ++. +...+||+
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~ 106 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPK 106 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCC
Confidence 45689999999999999999999999995 2445666778888887665 442 35688999
Q ss_pred hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 199 PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 199 ~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|.++..+++++++++++++||||+. +|+++|+++|+.+|+++.
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYAR 149 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEEC
Confidence 9999999999999999999999999 999999999999999974
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=133.04 Aligned_cols=97 Identities=20% Similarity=0.269 Sum_probs=84.6
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---------ccceeeCC----CCCCCCChHHHHHHHHh
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---------FSPALSRE----FRPYKPDPGPLLHICST 208 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---------fd~v~~~~----~~~~Kp~~~~~~~~~~~ 208 (280)
..+.||+.++++.++++|++++|+|++....++++.+.+|++ -++++++. ...++-|...+..++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999988 12334443 12445677899999999
Q ss_pred cCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 209 WEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 209 lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
+|+++++++++|||. ||+.|.+.+|...+.
T Consensus 156 ~g~~~~~~~a~gDs~-nDlpml~~ag~~ia~ 185 (212)
T COG0560 156 LGIPLEETVAYGDSA-NDLPMLEAAGLPIAV 185 (212)
T ss_pred cCCCHHHeEEEcCch-hhHHHHHhCCCCeEe
Confidence 999999999999999 999999999997665
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=139.57 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=98.5
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-C---CCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-F---RPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~---~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
++++.+.++.|++.+.+++++||............+|.. |+.+.+.. . ..+||+|.+|+.+++++|++|++++|
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 567888899999999999999998776665555556665 55554322 1 24799999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|||+..+|+.+|+++|+.+++|.++. +...+.......|+++++++.|+.++|
T Consensus 202 vGD~~~~Di~~a~~~G~~~i~v~~G~-~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMRGIQVRTGK-YRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ECCCcHHHHHHHHHcCCeEEEECCCC-CChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99995489999999999999997531 222222222468999999999998875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=133.66 Aligned_cols=191 Identities=16% Similarity=0.199 Sum_probs=121.5
Q ss_pred EEEeCCCcccCCCCCHHHHHHHHhCCchHHHHH----hcCCChhhHHH-HhhccChhHHHHHHHHHHHHHHhcCCCcccC
Q 023578 71 VVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVK----AENPTGIDILH-HIESWSPDLQRHAYQTIADFERQGLDRLQIM 145 (280)
Q Consensus 71 iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (280)
|+||+||||++... +...++.. +.+.+..+. ....+..+.+. .+..+.....+... ++.. ....++
T Consensus 2 ~~fDFDgTit~~d~-~~~~~~~~-~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~----~~~~---~~~~l~ 72 (214)
T TIGR03333 2 IICDFDGTITNNDN-IISIMKQF-APPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEIT----SFVL---ETAEIR 72 (214)
T ss_pred EEeccCCCCCcchh-HHHHHHHh-CcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHH----HHHH---hcCccc
Confidence 79999999996554 33333333 323322221 11222233332 22333222211111 1111 246799
Q ss_pred cCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c---cceeeCC-CCCCCCChHHH----------HHHHHhc
Q 023578 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F---SPALSRE-FRPYKPDPGPL----------LHICSTW 209 (280)
Q Consensus 146 pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f---d~v~~~~-~~~~Kp~~~~~----------~~~~~~l 209 (280)
||+.++++.|+++|++++|+|++...+++.+++.++.. + +.++.++ ....||.|..+ ..+++++
T Consensus 73 pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~ 152 (214)
T TIGR03333 73 EGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKL 152 (214)
T ss_pred ccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999887543 2 2233332 34556766654 4778888
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
+..+++++||||+. +|+.+|+.+|+ +.+.+ .......+ ...+...+.++.|+.+.|+++.+
T Consensus 153 ~~~~~~~i~iGDg~-~D~~~a~~Ad~--~~ar~---~l~~~~~~-~~~~~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 153 SEPNDYHIVIGDSV-TDVEAAKQSDL--CFARD---YLLNECEE-LGLNHAPFQDFYDVRKELENVKE 213 (214)
T ss_pred hhcCCcEEEEeCCH-HHHHHHHhCCe--eEehH---HHHHHHHH-cCCCccCcCCHHHHHHHHHHHhc
Confidence 88889999999999 99999999998 33332 11111111 23467778999999999987654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=130.48 Aligned_cols=106 Identities=13% Similarity=0.051 Sum_probs=82.4
Q ss_pred cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCc----hHHHHHHHHHcCC--c--ccceeeCCCCCCCCChHHHHHHHHhc
Q 023578 138 GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNI----KEAVDLFHNRFGI--T--FSPALSREFRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 138 ~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~----~~~~~~~l~~~g~--~--fd~v~~~~~~~~Kp~~~~~~~~~~~l 209 (280)
......++||+.++|+.|+++|++++++||.. ....+.+++.+|+ . |+.+++++. ..||++.. .++++
T Consensus 109 ~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~-~~K~~K~~---~l~~~ 184 (237)
T PRK11009 109 WDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK-PGQYTKTQ---WLKKK 184 (237)
T ss_pred ccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC-CCCCCHHH---HHHhc
Confidence 34457899999999999999999999999953 4566777778999 4 677777664 35666543 55667
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccc
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT 252 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~ 252 (280)
|+ ++||||+. +|+.+|+++|+.+|.+.++.+......+
T Consensus 185 ~i----~I~IGDs~-~Di~aA~~AGi~~I~v~~G~~~~~~~~~ 222 (237)
T PRK11009 185 NI----RIFYGDSD-NDITAAREAGARGIRILRAANSTYKPLP 222 (237)
T ss_pred CC----eEEEcCCH-HHHHHHHHcCCcEEEEecCCCCCCCccc
Confidence 75 89999999 9999999999999999875444443333
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-17 Score=130.12 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=78.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCC---------------------CCCCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREF---------------------RPYKP 197 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~---------------------~~~Kp 197 (280)
...+.||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++. ..+.+
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 3689999999999999999999999999999999999999987 888886431 13345
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~ 237 (280)
|++.++.+.++. +++++||||+. +|+.+|+++++-+
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~-~D~~aa~~~d~~~ 185 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGV-TDVCPAKLSDVVF 185 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCc-chhchHhcCCccc
Confidence 677888877765 78999999999 9999999997644
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-17 Score=121.74 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=75.5
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCC-chHHHHHHHHHcC-------Cc--ccceeeCCCCCCCCChHHHHHHHHhcC--
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRN-IKEAVDLFHNRFG-------IT--FSPALSREFRPYKPDPGPLLHICSTWE-- 210 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~-~~~~~~~~l~~~g-------~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lg-- 210 (280)
.++||+.++|+.|+++|++++++||+ ....+...++.++ +. |+.+++++ .+|+|+.|..+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~---~~pkp~~~~~a~~~lg~~ 105 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY---WLPKSPRLVEIALKLNGV 105 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC---CCcHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999 8888888888888 45 77776654 3588999999999999
Q ss_pred CCCCcEEEEcCCchhhHHHHHH
Q 023578 211 VQPNEVMMVGDSLKDDVACGKR 232 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~ 232 (280)
+.|++|+||||+. .|++..++
T Consensus 106 ~~p~~~l~igDs~-~n~~~~~~ 126 (128)
T TIGR01681 106 LKPKSILFVDDRP-DNNEEVDY 126 (128)
T ss_pred CCcceEEEECCCH-hHHHHHHh
Confidence 9999999999999 99877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-17 Score=131.85 Aligned_cols=108 Identities=18% Similarity=0.170 Sum_probs=88.0
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
.++.|+++|++++|+||.....++.+++.+|+. .++. ..++++..++.+++++|+++++++||||+. +|+.++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~----g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a 128 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQ----GQSNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVM 128 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeec----CCCcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHH
Confidence 678888999999999999999999999999976 2222 135678999999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEc------CHHHHHHHHH
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS------SLTEVLSILE 273 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~------~~~dl~~~l~ 273 (280)
+++|+.++ +. .+.... +..+++++. .+.|+.++|.
T Consensus 129 ~~aG~~~~-v~----~~~~~~---~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 129 EKVGLSVA-VA----DAHPLL---LPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHCCCeEe-cC----ChhHHH---HHhCCEEecCCCCCCHHHHHHHHHH
Confidence 99999854 43 222222 357899996 6888887765
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=119.88 Aligned_cols=128 Identities=20% Similarity=0.250 Sum_probs=100.9
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCC---------------chHHHHHHHHHcCCcccceeeC----C--CCCCCCCh
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRN---------------IKEAVDLFHNRFGITFSPALSR----E--FRPYKPDP 199 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~---------------~~~~~~~~l~~~g~~fd~v~~~----~--~~~~Kp~~ 199 (280)
.+.+.||+.+.+..|++.|++++++||. ....+...++..|+.|+.++.+ + +..+||++
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~ 108 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKP 108 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCCh
Confidence 3468899999999999999999999991 2233556667788888887653 2 46899999
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.++..+++++++++++.++|||.. .|+++|.++|+..+.+.++.... ... +...+++..++.++..++.
T Consensus 109 gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~ 177 (181)
T COG0241 109 GMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGVT--TDG--AGRAKWVFDSLAEFANLIK 177 (181)
T ss_pred HHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCcccc--ccc--ccccccccccHHHHHHHHH
Confidence 999999999999999999999999 99999999999988777522211 111 1266788888888884443
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=136.32 Aligned_cols=100 Identities=13% Similarity=0.015 Sum_probs=90.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC--------CCCCCCChHHHHHHHHhc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE--------FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~--------~~~~Kp~~~~~~~~~~~l 209 (280)
...++||+.++++.|+++|++++++||......+..++.+++. |+.+++.+ ...+||+|..+..+++++
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999888776 77777765 346799999999999999
Q ss_pred CC-CCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 210 EV-QPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 210 gi-~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
+. ++++|++|||+. +|+++|+++|+.+++|.
T Consensus 265 ~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~ 296 (300)
T PHA02530 265 IAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVA 296 (300)
T ss_pred hccCceEEEEEcCcH-HHHHHHHHhCCeEEEec
Confidence 98 679999999999 99999999999999996
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.5e-16 Score=127.91 Aligned_cols=74 Identities=27% Similarity=0.299 Sum_probs=60.0
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
.+||+|.+|+.+++++|++++++++|||+..+|+.+|+++|+.+++|.++. ....+.......|+++++++.|+
T Consensus 176 ~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~-~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 176 IGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGV-TKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred cCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCC-CCHHHHhcCCCCCCEEeCChhhC
Confidence 579999999999999999999999999996479999999999999997532 22222222235799999998774
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6e-16 Score=127.98 Aligned_cols=75 Identities=25% Similarity=0.399 Sum_probs=62.6
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
..+||+|.++..+++++|+++++|+||||+..+|+.+|+++|+.+++|.+ |.+...+.......|+++++|+.|+
T Consensus 171 ~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~-G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 171 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLS-GVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECC-CCCCHHHHhcCCCCCCEEECCHHHh
Confidence 35899999999999999999999999999975799999999999999974 2333333332246899999999997
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=123.13 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=82.0
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccc--------eeeCC----CCCCCCChHHHHHHHH
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSP--------ALSRE----FRPYKPDPGPLLHICS 207 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~--------v~~~~----~~~~Kp~~~~~~~~~~ 207 (280)
..++||+.++++.++++|++++|+|++....++.+++.+|++ |.. .+++. ...+++|...++.+++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999987 322 22222 1245667788999999
Q ss_pred hcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 208 ~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
+.++++++|+++|||. +|+.+++.+|..++.
T Consensus 166 ~~~~~~~~~~~~gDs~-~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSI-SDLPLLSLVGHPYVV 196 (202)
T ss_pred HcCCCHHHcEeeeCCc-ccHHHHHhCCCcEEe
Confidence 9999999999999999 999999999987654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=120.50 Aligned_cols=93 Identities=19% Similarity=0.307 Sum_probs=76.1
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccc--------eeeCC-----CCCCCCChHHHHH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSP--------ALSRE-----FRPYKPDPGPLLH 204 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~--------v~~~~-----~~~~Kp~~~~~~~ 204 (280)
....+.||+.++++.++++|++++|+|++...+++.+++.+|+. |.. .+.+. ...+..|+..+..
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 34568999999999999999999999999999999999999986 222 22221 1234556778889
Q ss_pred HHHhcCCCCCcEEEEcCCchhhHHHHHHc
Q 023578 205 ICSTWEVQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 205 ~~~~lgi~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
+++++|++++++++|||+. +|+.+++.+
T Consensus 150 ~~~~~~~~~~~~~~iGDs~-~D~~~~~~a 177 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSV-NDLPMLKLA 177 (177)
T ss_pred HHHHhCCCHHHEEEEeCCH-HHHHHHhcC
Confidence 8999999999999999999 999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=134.08 Aligned_cols=122 Identities=22% Similarity=0.272 Sum_probs=90.0
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHH-HHHHHcCCc--cccee---eCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVD-LFHNRFGIT--FSPAL---SRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~-~~l~~~g~~--fd~v~---~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
++++.++++.|+++|. ++++||....... ..+...|.. |+.+. +.+ ...+||+|.++..+++++|++|++++
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~l 223 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTL 223 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEE
Confidence 6789999999999887 7899997754331 122333443 44443 233 44789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccc------cCCCCCCEEEcCHHHH
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT------KSNLQPDFRVSSLTEV 268 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~------~~~~~~d~v~~~~~dl 268 (280)
||||+...|+++|+++|+.+++|.++ ....++.. ....+||++++++.|+
T Consensus 224 mIGD~~~tDI~~A~~aGi~si~V~~G-~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 224 MVGDRLETDILFGHRCGMTTVLVLSG-VSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EECCChHHHHHHHHHcCCcEEEECCC-CCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999449999999999999999752 22222222 1135799999998874
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-15 Score=124.45 Aligned_cols=81 Identities=32% Similarity=0.453 Sum_probs=69.6
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.+||.+.+|+.+++.+|.+++++++|||+..+||.+|.++||.+++|.. |.+...+.......++|+.+|+.++...+.
T Consensus 188 ~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~T-Gv~~~~~~~~~~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 188 IGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLT-GVSSAEDLDRAEVKPTYVVDSLAELITALK 266 (269)
T ss_pred cCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEcc-CCCChhhhhhhccCCcchHhhHHHHHhhhh
Confidence 4799999999999999999999999999999999999999999999985 344344444335789999999999998877
Q ss_pred hc
Q 023578 274 AN 275 (280)
Q Consensus 274 ~~ 275 (280)
.+
T Consensus 267 ~~ 268 (269)
T COG0647 267 EL 268 (269)
T ss_pred cc
Confidence 64
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-16 Score=122.18 Aligned_cols=93 Identities=13% Similarity=0.016 Sum_probs=82.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
...++||+.++|++|+ ++++++|+|++...+++.+++.+++. |+.+++++ ....||+ |.++++++|.+|++|
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~ 118 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNV 118 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcE
Confidence 4578999999999999 56999999999999999999999884 58888866 6677886 899999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEE
Q 023578 217 MMVGDSLKDDVACGKRAGAFTC 238 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i 238 (280)
++|||+. .|++++.++|+.+-
T Consensus 119 i~i~Ds~-~~~~aa~~ngI~i~ 139 (148)
T smart00577 119 IIIDDSP-DSWPFHPENLIPIK 139 (148)
T ss_pred EEEECCH-HHhhcCccCEEEec
Confidence 9999999 99999999988653
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.2e-16 Score=126.07 Aligned_cols=90 Identities=27% Similarity=0.410 Sum_probs=79.5
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGD 221 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGD 221 (280)
.+++|++.++|+.|++.|++++++||.....+..+.+.+|+. +.++.++.. +||.+.++..+++++++++.+|+||||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~-~~~v~a~~~-~kP~~k~~~~~i~~l~~~~~~v~~vGD 203 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF-DSIVFARVI-GKPEPKIFLRIIKELQVKPGEVAMVGD 203 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC-SEEEEESHE-TTTHHHHHHHHHHHHTCTGGGEEEEES
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc-ccccccccc-ccccchhHHHHHHHHhcCCCEEEEEcc
Confidence 367899999999999999999999999999999999999994 433333211 799999999999999999999999999
Q ss_pred CchhhHHHHHHcC
Q 023578 222 SLKDDVACGKRAG 234 (280)
Q Consensus 222 s~~~Di~~a~~~G 234 (280)
+. ||+.|+++||
T Consensus 204 g~-nD~~al~~Ag 215 (215)
T PF00702_consen 204 GV-NDAPALKAAG 215 (215)
T ss_dssp SG-GHHHHHHHSS
T ss_pred CH-HHHHHHHhCc
Confidence 99 9999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=130.86 Aligned_cols=122 Identities=18% Similarity=0.197 Sum_probs=84.7
Q ss_pred HHHhhhCCCeEEEEeCCchHH-HHHHHHHcCCc--ccceeeCC----CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCch
Q 023578 152 CGFLDSKKIRRGLITRNIKEA-VDLFHNRFGIT--FSPALSRE----FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224 (280)
Q Consensus 152 l~~L~~~g~~i~ivS~~~~~~-~~~~l~~~g~~--fd~v~~~~----~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~ 224 (280)
...|++++-..+|+||..... ....+...|.. |+.+.+.. ...+||+|.+|..+++++|+++++++||||+..
T Consensus 179 ~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~ 258 (311)
T PLN02645 179 TLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLD 258 (311)
T ss_pred HHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcH
Confidence 344444333577777766433 12222334444 55554432 124799999999999999999999999999965
Q ss_pred hhHHHHHHcCCcEEEEcCCCCCCcccccc--CCCCCCEEEcCHHHHHHHHHh
Q 023578 225 DDVACGKRAGAFTCLLDETGRYSADDFTK--SNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 225 ~Di~~a~~~G~~~i~v~~~~~~~~~~~~~--~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+|+.+|+++|+.+++|.++. ....+... ....|+++++++.+|.++++.
T Consensus 259 ~Di~~A~~aG~~~ilV~~G~-~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~~ 309 (311)
T PLN02645 259 TDILFGQNGGCKTLLVLSGV-TSESMLLSPENKIQPDFYTSKISDFLTLKAA 309 (311)
T ss_pred HHHHHHHHcCCCEEEEcCCC-CCHHHHHhccCCCCCCEEECCHHHHHHHhhc
Confidence 89999999999999997422 22222211 135799999999999988765
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.7e-14 Score=114.41 Aligned_cols=168 Identities=13% Similarity=-0.040 Sum_probs=99.9
Q ss_pred ccEEEEeCCCcccCCCC--CHHHHH-HHHhCCch--HHHHH-hcCCChhhHHHH------------hhccChhHHHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVI--DFPAMY-RAVLGEDE--YKRVK-AENPTGIDILHH------------IESWSPDLQRHAYQ 129 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~--~~~~~~-~~~~g~~~--~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 129 (280)
.|+++||+||||++... .+...+ ++. |.+. ....+ ..+......... ....+.+..+...+
T Consensus 6 ~k~~iFD~DGTL~~~d~~~~~~~~~~~~~-g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 84 (211)
T PRK11590 6 RRVVFFDLDGTLHQQDMFGSFLRYLLRRQ-PLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQALEA 84 (211)
T ss_pred ceEEEEecCCCCcccchHHHHHHHHHHhc-chhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHHHH
Confidence 58999999999994332 333333 222 4432 12221 122222111111 11234444444444
Q ss_pred HHHHHHHhcCCCcccCcCHHHHH-HHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceeeCC---------CCCCCCC
Q 023578 130 TIADFERQGLDRLQIMPGTAQLC-GFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALSRE---------FRPYKPD 198 (280)
Q Consensus 130 ~~~~~~~~~~~~~~~~pg~~~~l-~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~~---------~~~~Kp~ 198 (280)
.+.+.+.. ...++||+.+.| +.+++.|++++|+||+....++.+++.+|+. .+.+++.+ .+..--.
T Consensus 85 ~f~~~~~~---~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g 161 (211)
T PRK11590 85 DFVRWFRD---NVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLG 161 (211)
T ss_pred HHHHHHHH---hCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCC
Confidence 44333322 256799999999 5788899999999999999999999998852 23333322 1110001
Q ss_pred hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 199 PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 199 ~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
.+-...+-+.+|.+...+.+.|||. +|+.+...+|-..+ |+
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~-~D~pmL~~a~~~~~-vn 202 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSK-QDNPLLYFCQHRWR-VT 202 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCc-ccHHHHHhCCCCEE-EC
Confidence 1222333444576778899999999 99999999997654 44
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.6e-15 Score=132.98 Aligned_cols=91 Identities=21% Similarity=0.278 Sum_probs=80.1
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCch------------HHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcC
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIK------------EAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~------------~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lg 210 (280)
++||+.+.|+.|++.|++++|+||... ..+..+++.+|+.|+.+++.+ ...+||+|.++..++++++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~~~~~RKP~pGm~~~a~~~~~ 277 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIGAGFYRKPLTGMWDHLKEEAN 277 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCCCCCCCCCCHHHHHHHHHhcC
Confidence 689999999999999999999999655 357788999999999888765 5688999999999999995
Q ss_pred ----CCCCcEEEEcCCchhhHHHHHHcCC
Q 023578 211 ----VQPNEVMMVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 211 ----i~~~~~v~iGDs~~~Di~~a~~~G~ 235 (280)
+++++++||||.. .|+++++++|-
T Consensus 278 ~~~~Id~~~S~~VGDaa-gr~~~g~~ag~ 305 (526)
T TIGR01663 278 DGTEIQEDDCFFVGDAA-GRPANGKAAGK 305 (526)
T ss_pred cccCCCHHHeEEeCCcc-cchHHHHhcCC
Confidence 8999999999999 99888776664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-14 Score=121.36 Aligned_cols=123 Identities=11% Similarity=0.101 Sum_probs=81.6
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCc-----hHHHHHHHHHcCCcc--cceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNI-----KEAVDLFHNRFGITF--SPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~-----~~~~~~~l~~~g~~f--d~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
++++.+++..++..+..+.++++.. ....+.+.+.+++.. ...-.-+ ...+..|+.+++.+++++|++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~ 218 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV 218 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence 3456666677766666666777643 223344445555431 0000012 2234456789999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhcc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEANF 276 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~ 276 (280)
++|||+. ||++|++.+|+.+++ +++.++.+ ..|++++.+..+ +...|++++
T Consensus 219 i~~GD~~-NDi~m~~~ag~~vam-----gna~~~lk---~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 219 VAFGDNF-NDISMLEAAGLGVAM-----GNADDAVK---ARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred EEeCCCh-hhHHHHHhcCceEEe-----cCchHHHH---HhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999 999999999986655 23444443 589999987766 777776653
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.6e-15 Score=111.99 Aligned_cols=121 Identities=12% Similarity=0.132 Sum_probs=86.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccce------------eeC-CC----CCCCCChHHH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPA------------LSR-EF----RPYKPDPGPL 202 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v------------~~~-~~----~~~Kp~~~~~ 202 (280)
...++.||+.++++.|+++|.+++++|++.+.++..+...+|+++..+ +.+ +. ..+--|++.+
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 356789999999999999999999999999999999999999983222 111 11 1233456777
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 203 LHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 203 ~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
..+.+ |.....++||||+. +|+++..- |..+++.. +..-....+..+.+.+.+|..|.
T Consensus 165 ~~lrk--~~~~~~~~mvGDGa-tDlea~~p-a~afi~~~-----g~~~r~~vk~nak~~~~~f~~L~ 222 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGA-TDLEAMPP-ADAFIGFG-----GNVIREGVKANAKWYVTDFYVLG 222 (227)
T ss_pred HHHHh--CCChheeEEecCCc-cccccCCc-hhhhhccC-----CceEcHhhHhccHHHHHHHHHHc
Confidence 77777 77888999999999 99998766 44444432 12222222457777776666554
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-15 Score=112.29 Aligned_cols=115 Identities=19% Similarity=0.258 Sum_probs=89.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
...+|. .++.|.+.|++++|+|+.....++...+.+|+. .++-+ .+.|...++.+++++++++++|.||||.
T Consensus 37 nv~DG~--Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG----~~dK~~a~~~L~~~~~l~~e~~ayiGDD 108 (170)
T COG1778 37 NVRDGH--GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQG----ISDKLAAFEELLKKLNLDPEEVAYVGDD 108 (170)
T ss_pred eccCcH--HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeec----hHhHHHHHHHHHHHhCCCHHHhhhhcCc
Confidence 345565 688899999999999999999999999999986 22221 1456689999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc------CHHHHHHHHHh
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS------SLTEVLSILEA 274 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~------~~~dl~~~l~~ 274 (280)
. +|+.+.+++|++++..+ +..... ..++||+. -+.|+.++|-.
T Consensus 109 ~-~Dlpvm~~vGls~a~~d-----Ah~~v~---~~a~~Vt~~~GG~GAvREv~dlil~ 157 (170)
T COG1778 109 L-VDLPVMEKVGLSVAVAD-----AHPLLK---QRADYVTSKKGGEGAVREVCDLILQ 157 (170)
T ss_pred c-ccHHHHHHcCCcccccc-----cCHHHH---HhhHhhhhccCcchHHHHHHHHHHH
Confidence 9 99999999999876532 222333 36777765 35666666543
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-14 Score=123.68 Aligned_cols=89 Identities=12% Similarity=0.141 Sum_probs=80.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH----cCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR----FGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~----~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
.++||+.++|+.|+++|++++|+|++....+..+++. +++. |+.+.++ .||+|+.+..+++++|+.++++
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~----~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN----WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe----cCchHHHHHHHHHHhCCCcCcE
Confidence 4689999999999999999999999999999999998 7776 6665443 5899999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCc
Q 023578 217 MMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~ 236 (280)
+||||+. .|+.++++++-.
T Consensus 107 vfidD~~-~d~~~~~~~lp~ 125 (320)
T TIGR01686 107 LFIDDNP-AERANVKITLPV 125 (320)
T ss_pred EEECCCH-HHHHHHHHHCCC
Confidence 9999999 999999997754
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.1e-14 Score=106.59 Aligned_cols=94 Identities=27% Similarity=0.434 Sum_probs=75.1
Q ss_pred CcccCcCHHHHHHHhhhCCC--eEEEEeCCc-------hHHHHHHHHHcCCc-ccceeeCCCCCCCCChHHHHHHHHhcC
Q 023578 141 RLQIMPGTAQLCGFLDSKKI--RRGLITRNI-------KEAVDLFHNRFGIT-FSPALSREFRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~--~i~ivS~~~-------~~~~~~~l~~~g~~-fd~v~~~~~~~~Kp~~~~~~~~~~~lg 210 (280)
...+.|.+.+.++++++.+. +++|+||+. ...++.+.+.+|+. +- ....|| ..+..+++.++
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~------h~~kKP--~~~~~i~~~~~ 128 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLR------HRAKKP--GCFREILKYFK 128 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEE------eCCCCC--ccHHHHHHHHh
Confidence 34677888999999999876 499999973 66778888899976 22 123466 56667777775
Q ss_pred C-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 211 V-----QPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 211 i-----~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
. .|+|+++|||..-+|+.+|+..|+.+|++.+
T Consensus 129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~ 165 (168)
T PF09419_consen 129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD 165 (168)
T ss_pred hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence 4 5999999999999999999999999999975
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-14 Score=94.73 Aligned_cols=73 Identities=37% Similarity=0.525 Sum_probs=62.2
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
.+||+|.++..++++++++++++++|||+ . .|+++|+++|+.+|+|.++ .....+.......|++|++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~-~Di~~a~~~G~~~ilV~tG-~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLE-TDIEAAKAAGIDTILVLTG-VYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTT-THHHHHHHTTSEEEEESSS-SSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcH-hHHHHHHHcCCcEEEECCC-CCCHHHHhccCCCCCEEECCHHhC
Confidence 57999999999999999999999999999 6 9999999999999999863 333333332347999999999986
|
... |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.8e-14 Score=109.53 Aligned_cols=99 Identities=17% Similarity=0.296 Sum_probs=82.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCc--ccceeeC------C------CC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGIT--FSPALSR------E------FR 193 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~--fd~v~~~------~------~~ 193 (280)
.+.|+...++..|++.|++++|||=+.. ++++..++.-+-+ .+.++++ + .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 3678899999999999999999996544 3567777766655 3445432 1 25
Q ss_pred CCCCChHH--H--HHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 194 PYKPDPGP--L--LHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 194 ~~Kp~~~~--~--~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
..||+|.. | +++++++|+.|+|++||+|+. .++++|+++|+.++.+..
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKNALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHHHHHCCCEEEEcCC
Confidence 78999999 8 999999999999999999999 999999999999999875
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.2e-13 Score=118.56 Aligned_cols=152 Identities=12% Similarity=0.102 Sum_probs=102.6
Q ss_pred cEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHh---cCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccC
Q 023578 69 RGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKA---ENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIM 145 (280)
Q Consensus 69 k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (280)
+-++||+||||+.++..+.-.+..+ +..+...... ... +.. ...+........-....++.
T Consensus 11 ~pl~~DlDgTLi~td~l~e~~~~~l-~~~p~~~~~l~~~~~~-g~a--------------~lK~~~a~~~~~d~~~lp~~ 74 (479)
T PRK08238 11 LPLVVDLDGTLIRTDLLHESIFALL-RRNPLALLRLPLWLLR-GKA--------------ALKRRLARRVDLDVATLPYN 74 (479)
T ss_pred CCEEEeCCCCccccchHHHHHHHHH-HhChHHHHHHHHHHHh-cHH--------------HHHHHHHhhcCCChhhCCCC
Confidence 4699999999998777555555444 4444222211 000 000 00011111111111344578
Q ss_pred cCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCch
Q 023578 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224 (280)
Q Consensus 146 pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~ 224 (280)
||+.+.+++++++|++++++|++.+..++.+.+++|+ ||.+++++ ....||++.. +.+.+.++ .++++++||+.
T Consensus 75 pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl-Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~yvGDS~- 149 (479)
T PRK08238 75 EEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL-FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDYAGNSA- 149 (479)
T ss_pred hhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC-CCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeEecCCH-
Confidence 9999999999999999999999999999999999998 89999876 4455554432 33445665 35689999999
Q ss_pred hhHHHHHHcCCcEEEEcC
Q 023578 225 DDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 225 ~Di~~a~~~G~~~i~v~~ 242 (280)
+|+.+++.+| ..+.|+.
T Consensus 150 ~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 150 ADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred HHHHHHHhCC-CeEEECC
Confidence 9999999999 5667764
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-13 Score=106.25 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=71.7
Q ss_pred ccc-CcCHHHHHHHhhhCCCeEEEEeCC----c----------hHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHH
Q 023578 142 LQI-MPGTAQLCGFLDSKKIRRGLITRN----I----------KEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHI 205 (280)
Q Consensus 142 ~~~-~pg~~~~l~~L~~~g~~i~ivS~~----~----------~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~ 205 (280)
..+ .|++.+.|+.|.+.|+.++|+||. . ...++.+++.+++.+..+++.. ...+||.+.+++.+
T Consensus 27 ~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 27 WKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp GEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHH
T ss_pred hhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHH
Confidence 344 458999999999999999999983 1 1235566778888755455544 57999999999999
Q ss_pred HHhcCC----CCCcEEEEcCC-----------chhhHHHHHHcCCcEE
Q 023578 206 CSTWEV----QPNEVMMVGDS-----------LKDDVACGKRAGAFTC 238 (280)
Q Consensus 206 ~~~lgi----~~~~~v~iGDs-----------~~~Di~~a~~~G~~~i 238 (280)
++.++. +.++++||||. . .|..-|.++|+.+.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~-~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSD-SDRKFALNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S---HHHHHHHHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccCh-hHHHHHHHcCCccc
Confidence 999974 89999999996 5 79999999999754
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.5e-13 Score=110.18 Aligned_cols=105 Identities=18% Similarity=0.162 Sum_probs=75.0
Q ss_pred EEEEeCCchHHHHHHHHHcCCcccceee---CC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 023578 162 RGLITRNIKEAVDLFHNRFGITFSPALS---RE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 162 i~ivS~~~~~~~~~~l~~~g~~fd~v~~---~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~ 237 (280)
+.+.++.....+...++.++..+..+.+ .+ ...+..|+.+++.+++++|++++++++|||+. ||++|++.+|+.+
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~-NDi~m~~~ag~~v 196 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSE-NDLEMFEVAGFGV 196 (230)
T ss_pred eeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCch-hhHHHHHhcCceE
Confidence 3444554555566677776644322222 13 33566788999999999999999999999999 9999999999987
Q ss_pred EEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhc
Q 023578 238 CLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEAN 275 (280)
Q Consensus 238 i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~ 275 (280)
++- ++.++.+ ..+++++.+..+ +.+.|+++
T Consensus 197 am~-----Na~~~vk---~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 197 AVA-----NADEELK---EAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred Eec-----CccHHHH---HhcceEecCCCcChHHHHHHHH
Confidence 763 4444554 478999987655 66666654
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=100.21 Aligned_cols=80 Identities=25% Similarity=0.451 Sum_probs=69.9
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.+||.+..|+.+++.+|++|+++|||||....|+..|.++||+.|.|.. |.|...+.......|+.++++|.|..++|-
T Consensus 179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkT-GK~rpsDe~k~~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKT-GKFRPSDEEKPPVPPDLTADNFADAVDLII 257 (262)
T ss_pred ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeec-cccCCcccccCCCCcchhhhhHHHHHHHHH
Confidence 7899999999999999999999999999997799999999999999986 456554444446899999999999888875
Q ss_pred h
Q 023578 274 A 274 (280)
Q Consensus 274 ~ 274 (280)
+
T Consensus 258 q 258 (262)
T KOG3040|consen 258 Q 258 (262)
T ss_pred h
Confidence 4
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.46 E-value=5e-12 Score=95.66 Aligned_cols=120 Identities=16% Similarity=0.182 Sum_probs=96.3
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-----ccceeeCCCCCCCCChHHHHHHHHhcCCCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-----FSPALSREFRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-----fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
-...++|++.+.|++.++.|++++|.|+++...++..+..-... |++.+....+ .|-....|.++++..|++|.
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG-~KrE~~SY~kIa~~iGl~p~ 178 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIG-KKRESQSYAKIAGDIGLPPA 178 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecccc-ccccchhHHHHHHhcCCCch
Confidence 45678999999999999999999999999988877766443222 6666555444 36667899999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHH
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLT 266 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~ 266 (280)
+++|+-|.+ ..+.+|+.+|+.++++.++|+.... ......++.|+.
T Consensus 179 eilFLSDn~-~EL~AA~~vGl~t~l~~R~g~~P~~-----d~~~~~~~~sf~ 224 (229)
T COG4229 179 EILFLSDNP-EELKAAAGVGLATGLAVRPGNAPVP-----DGQGFLVYKSFE 224 (229)
T ss_pred heEEecCCH-HHHHHHHhcchheeeeecCCCCCCC-----CCcCceeeechh
Confidence 999999999 9999999999999999987654332 234556677766
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.8e-13 Score=110.82 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=59.1
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHH
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSIL 272 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l 272 (280)
+-.|..+++.+++++|++++++++|||+. ||++|.+.+|..+++ +++.++.++ .|++|+.+.++ +...|
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~-NDi~Ml~~ag~~vAm-----~NA~~~vK~---~A~~vt~~n~~dGva~~i 264 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQE-NDIAMIEYAGVGVAM-----GNAIPSVKE---VAQFVTKSNLEDGVAFAI 264 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCch-hhHHHHHhCCceEEe-----cCccHHHHH---hcCeeccCCCcchHHHHH
Confidence 34466788999999999999999999999 999999999998887 345555554 89999987655 66666
Q ss_pred Hhcc
Q 023578 273 EANF 276 (280)
Q Consensus 273 ~~~~ 276 (280)
++++
T Consensus 265 ~~~~ 268 (270)
T PRK10513 265 EKYV 268 (270)
T ss_pred HHHh
Confidence 6653
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=104.73 Aligned_cols=84 Identities=19% Similarity=0.364 Sum_probs=65.3
Q ss_pred cCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCC---C--------CCC---CChHHHHHH---HHh
Q 023578 146 PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREF---R--------PYK---PDPGPLLHI---CST 208 (280)
Q Consensus 146 pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~---~--------~~K---p~~~~~~~~---~~~ 208 (280)
|++.++++.++++|++++|+|++....++.+++.+|++.+.+++.+. + .+. .|...++.+ ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 45559999999999999999999999999999999987444554332 0 000 155666666 444
Q ss_pred cCCCCCcEEEEcCCchhhHHHHH
Q 023578 209 WEVQPNEVMMVGDSLKDDVACGK 231 (280)
Q Consensus 209 lgi~~~~~v~iGDs~~~Di~~a~ 231 (280)
+.....+++||||. +|+.+++
T Consensus 172 -~~~~~~~~~iGDs~-~D~~~lr 192 (192)
T PF12710_consen 172 -DIDPDRVIAIGDSI-NDLPMLR 192 (192)
T ss_dssp -THTCCEEEEEESSG-GGHHHHH
T ss_pred -CCCCCeEEEEECCH-HHHHHhC
Confidence 78899999999999 9999875
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=99.78 Aligned_cols=119 Identities=11% Similarity=-0.068 Sum_probs=78.7
Q ss_pred hhccChhHHHHHHHHHHHHHHhcCCCcccCcCHHHHHH-HhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceeeCCCC
Q 023578 116 IESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCG-FLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALSREFR 193 (280)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~-~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~~~~ 193 (280)
+.+.+.+..++..+.+.+.+. ....++||+.+.|+ .++++|++++|+||+....++.+.+..++. .+.+++.+..
T Consensus 70 ~~g~~~~~l~~~~~~f~~~~~---~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le 146 (210)
T TIGR01545 70 TFGHREAHLQDLEADFVAAFR---DKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIE 146 (210)
T ss_pred HcCCCHHHHHHHHHHHHHHHH---HhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeE
Confidence 345565555555444433222 23468999999996 788899999999999999999999886552 2344443210
Q ss_pred --C-CC---C---ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 023578 194 --P-YK---P---DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTC 238 (280)
Q Consensus 194 --~-~K---p---~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i 238 (280)
. ++ + ..+-...+.+.+|.+...+.+.|||. +|+.+...+|-..+
T Consensus 147 ~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~-~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 147 RGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSK-QDNPLLAFCEHRWR 199 (210)
T ss_pred EeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCc-ccHHHHHhCCCcEE
Confidence 0 11 1 11222233344565667889999999 99999999998654
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-12 Score=109.30 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=57.6
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCE--EEcCHHH--HHHHH
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDF--RVSSLTE--VLSIL 272 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~--v~~~~~d--l~~~l 272 (280)
.|..+++.+++++|++++++++|||+. ||++|.+.+|..+++ +++.++.++ .+++ ++.+.++ +...|
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~-NDi~Ml~~ag~~vAm-----~Na~~~vK~---~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAM-NDREMLGSVGRGFIM-----GNAMPQLRA---ELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCH-HHHHHHHHcCCceec-----cCChHHHHH---hCCCCeecCCCcchHHHHHH
Confidence 467789999999999999999999999 999999999998877 345555554 5554 6766554 77778
Q ss_pred HhccC
Q 023578 273 EANFD 277 (280)
Q Consensus 273 ~~~~~ 277 (280)
++++.
T Consensus 259 ~~~~~ 263 (272)
T PRK15126 259 THWLD 263 (272)
T ss_pred HHHhc
Confidence 77765
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.2e-12 Score=104.60 Aligned_cols=102 Identities=18% Similarity=0.236 Sum_probs=80.2
Q ss_pred CCcccCcCHHHHHHHh--hhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-----CC----------------C
Q 023578 140 DRLQIMPGTAQLCGFL--DSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-----FR----------------P 194 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L--~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-----~~----------------~ 194 (280)
..+++.||+.++++.+ ++.|+.++|+|+++..+++.+++..|+. |+.|++.- .+ .
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 5778999999999999 4579999999999999999999999998 77776531 11 1
Q ss_pred CCCChHHHHHHHHh---cCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 195 YKPDPGPLLHICST---WEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~---lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
..-|...++..++. -|+..++++||||+. ||+-++...+-.-+...+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPR 197 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecC
Confidence 11245566666665 377889999999999 999999988776555554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-12 Score=105.93 Aligned_cols=63 Identities=17% Similarity=0.195 Sum_probs=51.8
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHH
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLT 266 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~ 266 (280)
+..|..+++.+++++|++++++++|||+. ||++|++.+|+.+++- ++.++.++ .+++++.+..
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~-ND~~ml~~ag~~vam~-----na~~~~k~---~A~~v~~~~~ 207 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSE-NDIDLFRVVGFKVAVA-----NADDQLKE---IADYVTSNPY 207 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHhCCCeEEcC-----CccHHHHH---hCCEEcCCCC
Confidence 44567799999999999999999999999 9999999999988773 44445554 7889887543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-11 Score=102.10 Aligned_cols=93 Identities=13% Similarity=0.185 Sum_probs=78.1
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceee------CC-CCCCCCCh---------HH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALS------RE-FRPYKPDP---------GP 201 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~------~~-~~~~Kp~~---------~~ 201 (280)
....+.||+.++++.|+++|++++|+|++....++.+++.+|+. +..+++ .+ ...++|.| ..
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 36789999999999999999999999999999999999999985 444532 22 22456666 66
Q ss_pred HHHHHHhcC--CCCCcEEEEcCCchhhHHHHHHc
Q 023578 202 LLHICSTWE--VQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 202 ~~~~~~~lg--i~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
++.+++.++ .++++|++|||+. +|+.||..+
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~ 230 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQ-GDLRMADGV 230 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence 777889998 7999999999999 999997766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.6e-12 Score=106.53 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=57.3
Q ss_pred CCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCC--EEEcCHHH--HHHH
Q 023578 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPD--FRVSSLTE--VLSI 271 (280)
Q Consensus 196 Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d--~v~~~~~d--l~~~ 271 (280)
-.|..+++.+++++|++++++++|||+. ||++|.+.+|..+++ +++.++.++ .++ +|+.+.+| +...
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~-NDi~Ml~~ag~~vAm-----~NA~~~vK~---~A~~~~v~~~n~edGVa~~ 259 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGM-NDAEMLSMAGKGCIM-----GNAHQRLKD---LLPELEVIGSNADDAVPHY 259 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCc-ccHHHHHHcCCCeee-----cCCcHHHHH---hCCCCeecccCchHHHHHH
Confidence 3467789999999999999999999999 999999999998887 345555554 554 77877655 7777
Q ss_pred HHhcc
Q 023578 272 LEANF 276 (280)
Q Consensus 272 l~~~~ 276 (280)
|++++
T Consensus 260 l~~~~ 264 (266)
T PRK10976 260 LRKLY 264 (266)
T ss_pred HHHHh
Confidence 76653
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-13 Score=111.47 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=74.8
Q ss_pred eEEEEeCCchHHHHHHHHHcCCcccce---eeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 023578 161 RRGLITRNIKEAVDLFHNRFGITFSPA---LSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 161 ~i~ivS~~~~~~~~~~l~~~g~~fd~v---~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~ 236 (280)
...+.+..........++.++..+... ...+ ...+.+|..+++.+++++|++++++++|||+. ||+.|++.+|+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~-NDi~m~~~ag~~ 187 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSE-NDIDLFEVPGFG 187 (225)
T ss_pred eEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCH-hhHHHHHhcCce
Confidence 344555555566677777777542211 1123 33567788999999999999999999999999 999999999998
Q ss_pred EEEEcCCCCCCccccccCCCCCCEEEcCHHH------HHHHHHh
Q 023578 237 TCLLDETGRYSADDFTKSNLQPDFRVSSLTE------VLSILEA 274 (280)
Q Consensus 237 ~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d------l~~~l~~ 274 (280)
+++ .++.++.+ ..+++|+.+..+ +...|++
T Consensus 188 vam-----~Na~~~~k---~~A~~vt~~~~~~G~~~~v~~~l~~ 223 (225)
T TIGR01482 188 VAV-----ANAQPELK---EWADYVTESPYGEGGAEAIGEILQA 223 (225)
T ss_pred EEc-----CChhHHHH---HhcCeecCCCCCCcHHHHHHHHHHh
Confidence 777 34554554 488999876554 5555544
|
catalyze the same reaction as SPP. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-11 Score=102.10 Aligned_cols=77 Identities=21% Similarity=0.320 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHhc--------CC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCE
Q 023578 194 PYKPDPGPLLHICSTW--------EV-----QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDF 260 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~l--------gi-----~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~ 260 (280)
.+||++.+|+.+++.+ ++ ++++++||||+..+|+.+|+++||.+++|.. |.+...+.. ....|++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~t-G~~~~~~~~-~~~~p~~ 308 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKT-GVYNGGDDL-KECKPTL 308 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecc-cccCCCCCC-CCCCCCE
Confidence 5999999999988887 43 4579999999998999999999999999975 333333322 1357999
Q ss_pred EEcCHHHHHHHH
Q 023578 261 RVSSLTEVLSIL 272 (280)
Q Consensus 261 v~~~~~dl~~~l 272 (280)
+++|+.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999998875
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-12 Score=105.59 Aligned_cols=73 Identities=21% Similarity=0.230 Sum_probs=57.2
Q ss_pred CCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHH
Q 023578 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILE 273 (280)
Q Consensus 196 Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~ 273 (280)
..|..+++.+++++|++++++++|||+. ||++|.+.+|..+++- ++.++.++ .+++++.+..+ +...|+
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD~~-ND~~Ml~~ag~gvam~-----Na~~~~k~---~A~~vt~~n~~~Gv~~~l~ 258 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGDST-NDIEMLEVAGLGVAMG-----NADEELKE---LADYVTTSNDEDGVAEALE 258 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCCcc-ccHHHHHhcCeeeecc-----CCCHHHHh---hCCcccCCccchHHHHHHH
Confidence 3466788999999999999999999999 9999999999988873 44444443 67777676655 777777
Q ss_pred hccC
Q 023578 274 ANFD 277 (280)
Q Consensus 274 ~~~~ 277 (280)
+++.
T Consensus 259 ~~~~ 262 (264)
T COG0561 259 KLLL 262 (264)
T ss_pred HHhc
Confidence 6643
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.5e-13 Score=101.42 Aligned_cols=101 Identities=11% Similarity=0.204 Sum_probs=70.2
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeC-CchHHHHHHHHHcCCc-c--c-----ceee-CCCCCCCCChHHHHHHHHhc
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITR-NIKEAVDLFHNRFGIT-F--S-----PALS-REFRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~-~~~~~~~~~l~~~g~~-f--d-----~v~~-~~~~~~Kp~~~~~~~~~~~l 209 (280)
..+.++|++.++|+.|+++|++++++|- ...+.++.+++.+++. - . .++. -+... -.|..-|+.+.++.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~-gsK~~Hf~~i~~~t 120 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP-GSKTTHFRRIHRKT 120 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS-S-HHHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec-CchHHHHHHHHHhc
Confidence 4678999999999999999999999994 5567899999999876 0 0 1111 12222 36778999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|++.++++||+|.. .++...+..|+.++.+.+
T Consensus 121 gI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~ 152 (169)
T PF12689_consen 121 GIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPD 152 (169)
T ss_dssp ---GGGEEEEES-H-HHHHHHHTTT-EEEE-SS
T ss_pred CCChhHEEEecCch-hcceeeEecCcEEEEeCC
Confidence 99999999999999 999999999999999985
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.2e-12 Score=114.21 Aligned_cols=70 Identities=20% Similarity=0.188 Sum_probs=56.8
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHh
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEA 274 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~ 274 (280)
.|..+++.+++++|++++++++|||+. ||++|.+.+|..+++ +++.++.++ .|++|+.+.++ +...|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~-NDIeMLe~AG~gVAM-----gNA~eeVK~---~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGE-NDIEMLQLASLGVAL-----SNGAEKTKA---VADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecch-hhHHHHHHCCCEEEe-----CCCCHHHHH---hCCEEeCCCCcCHHHHHHHH
Confidence 455678889999999999999999999 999999999998887 345555554 89999987665 6666655
Q ss_pred c
Q 023578 275 N 275 (280)
Q Consensus 275 ~ 275 (280)
+
T Consensus 578 ~ 578 (580)
T PLN02887 578 Y 578 (580)
T ss_pred h
Confidence 4
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.4e-12 Score=104.09 Aligned_cols=89 Identities=10% Similarity=0.082 Sum_probs=72.2
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHH--HHHHHcCCc---ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD--LFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~--~~l~~~g~~---fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
..++||+.++|++|+++|++++++||+.+...+ ..++.+|+. |+.+++++... ...+..+++++|++++++
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~----~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA----VQMILESKKRFDIRNGII 98 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH----HHHHHhhhhhccCCCceE
Confidence 357999999999999999999999998887665 678999986 57777755221 146777778889999999
Q ss_pred EEEcCCchhhHHHHHHcCC
Q 023578 217 MMVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~ 235 (280)
++|||+. .|++....+|.
T Consensus 99 ~~vGd~~-~d~~~~~~~~~ 116 (242)
T TIGR01459 99 YLLGHLE-NDIINLMQCYT 116 (242)
T ss_pred EEeCCcc-cchhhhcCCCc
Confidence 9999999 89988765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.30 E-value=3e-11 Score=100.14 Aligned_cols=84 Identities=17% Similarity=0.233 Sum_probs=67.2
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchH---HHHHHHHHcCCc---ccceeeCCCCCCCCChHHHHHHHHhcCCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKE---AVDLFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~---~~~~~l~~~g~~---fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
....++||+.++++.|+++|++++++||+... .....++.+|+. ++.++..+.. ++|+...+.+.+.+++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~--~~K~~rr~~I~~~y~I-- 190 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK--SSKESRRQKVQKDYEI-- 190 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC--CCcHHHHHHHHhcCCE--
Confidence 35678999999999999999999999997643 445777889987 4566665433 5667888888887777
Q ss_pred CcEEEEcCCchhhHHHH
Q 023578 214 NEVMMVGDSLKDDVACG 230 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a 230 (280)
+++|||+. +|+..+
T Consensus 191 --vl~vGD~~-~Df~~~ 204 (266)
T TIGR01533 191 --VLLFGDNL-LDFDDF 204 (266)
T ss_pred --EEEECCCH-HHhhhh
Confidence 89999999 999654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3e-11 Score=99.13 Aligned_cols=79 Identities=27% Similarity=0.425 Sum_probs=65.5
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccc----cCCCCCCEEEcCHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT----KSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~----~~~~~~d~v~~~~~dl~ 269 (280)
.+||.+.+++.+.++++++|++++||||+..+||.-++++|++++++-.+.. ..++.. +....|||+++++.++.
T Consensus 222 ~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~-~led~~~~~~~~~~~PDyy~~~l~d~~ 300 (306)
T KOG2882|consen 222 LGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVT-TLEDILEAQGDNKMVPDYYADSLGDLL 300 (306)
T ss_pred cCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcC-cHHHHHhcccccCCCCchHHhhHHHHh
Confidence 6899999999999999999999999999998999999999999999986332 222211 12457999999999988
Q ss_pred HHHH
Q 023578 270 SILE 273 (280)
Q Consensus 270 ~~l~ 273 (280)
+.++
T Consensus 301 ~~~~ 304 (306)
T KOG2882|consen 301 PLLN 304 (306)
T ss_pred hhcc
Confidence 7664
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.8e-11 Score=91.08 Aligned_cols=127 Identities=10% Similarity=0.152 Sum_probs=88.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcC----Cc-ccce---------------eeCCCCCCCCCh
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFG----IT-FSPA---------------LSREFRPYKPDP 199 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g----~~-fd~v---------------~~~~~~~~Kp~~ 199 (280)
....+.||..++++++++++++++++|+|...++..+++.++ +. .+.+ ...+...+..++
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 457899999999999999999999999999999999998887 22 1111 111222333333
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
. ....+.-.++.++|.||+. .|+++|+....-++- ..--...++ +..+..-.+++.|+...+++.+.
T Consensus 150 ~----vI~~l~e~~e~~fy~GDsv-sDlsaaklsDllFAK-----~~L~nyc~e-qn~~f~~fe~F~eIlk~iekvl~ 216 (220)
T COG4359 150 S----VIHELSEPNESIFYCGDSV-SDLSAAKLSDLLFAK-----DDLLNYCRE-QNLNFLEFETFYEILKEIEKVLE 216 (220)
T ss_pred h----hHHHhhcCCceEEEecCCc-ccccHhhhhhhHhhH-----HHHHHHHHH-cCCCCcccccHHHHHHHHHHHHh
Confidence 3 4445555677799999999 999999988875442 111111111 45667778888888888877654
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.9e-12 Score=99.24 Aligned_cols=96 Identities=11% Similarity=-0.026 Sum_probs=81.7
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
.+...||+.++|++|++. +.++|.|++...+++.+++.++.. |+.+++.+ ....+++ +.+.++.+|.+++++
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~v 115 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKV 115 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhE
Confidence 456899999999999988 999999999999999999999865 67777765 3344554 677788899999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
++|||++ .++.++.+.|+.+..+.
T Consensus 116 IiVDD~~-~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 116 IIIDNSP-YSYSLQPDNAIPIKSWF 139 (162)
T ss_pred EEEeCCh-hhhccCccCEeecCCCC
Confidence 9999999 99999999998876644
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-10 Score=94.88 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=70.3
Q ss_pred HhhhCCCeEEEE---eCCchHHHHHHHHHcCCcc--cceeeCC-CCCCCCChHHHHHHHHhcCCCC-CcEEEEcCCchhh
Q 023578 154 FLDSKKIRRGLI---TRNIKEAVDLFHNRFGITF--SPALSRE-FRPYKPDPGPLLHICSTWEVQP-NEVMMVGDSLKDD 226 (280)
Q Consensus 154 ~L~~~g~~i~iv---S~~~~~~~~~~l~~~g~~f--d~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~-~~~v~iGDs~~~D 226 (280)
.+++.++...++ ++.....+...++..++.+ ... ..+ ...+ .|...++.+++++|+++ +++++|||+. ||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~-ND 219 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGR-FLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSP-ND 219 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCe-EEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCCh-hh
Confidence 344555555555 3333344444555555431 010 112 2344 67789999999999999 9999999999 99
Q ss_pred HHHHHHcCCcEEEEcCCCCCCccccccCC-CCC-CEEE--cC--HHHHHHHHHhc
Q 023578 227 VACGKRAGAFTCLLDETGRYSADDFTKSN-LQP-DFRV--SS--LTEVLSILEAN 275 (280)
Q Consensus 227 i~~a~~~G~~~i~v~~~~~~~~~~~~~~~-~~~-d~v~--~~--~~dl~~~l~~~ 275 (280)
++|++.+|+.+++-+ +.++.+++. ..+ ++++ .+ =+.+.+.|+++
T Consensus 220 i~m~~~ag~~vam~N-----A~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 220 LPMLEAADIAVVVPG-----PDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HHHHHhCCeeEEeCC-----CCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 999999999988844 444443111 233 4555 34 23466666654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.8e-11 Score=97.75 Aligned_cols=61 Identities=16% Similarity=0.298 Sum_probs=51.1
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d 267 (280)
|..+++.+++.+|++++++++|||+. ||++|.+.+|..+++ +++.++.+. .+++++.+-++
T Consensus 187 K~~ai~~l~~~~~i~~~~~~~~GD~~-ND~~Ml~~~~~~~am-----~na~~~~k~---~a~~i~~~~~~ 247 (254)
T PF08282_consen 187 KGSAIKYLLEYLGISPEDIIAFGDSE-NDIEMLELAGYSVAM-----GNATPELKK---AADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHHHHTTSGGGEEEEESSG-GGHHHHHHSSEEEEE-----TTS-HHHHH---HSSEEESSGTC
T ss_pred HHHHHHHHhhhcccccceeEEeeccc-ccHhHHhhcCeEEEE-----cCCCHHHHH---hCCEEecCCCC
Confidence 45578899999999999999999999 999999999998776 355556654 88999988776
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=95.88 Aligned_cols=48 Identities=31% Similarity=0.394 Sum_probs=44.9
Q ss_pred CCCCChHHHHHHHHhcCCCCCcE-EEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEV-MMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~-v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
.+||++.+|+.++++++++++++ +||||+..+|+.+|+++|+.+++|.
T Consensus 186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 67999999999999999998887 9999998579999999999999986
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.2e-11 Score=99.93 Aligned_cols=96 Identities=21% Similarity=0.206 Sum_probs=78.7
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccce--eeCC-CCCCCCChHHHHHHHHhcCCC-CCcEEE
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPA--LSRE-FRPYKPDPGPLLHICSTWEVQ-PNEVMM 218 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v--~~~~-~~~~Kp~~~~~~~~~~~lgi~-~~~~v~ 218 (280)
++++.++++.++++|+++ ++||....+.......+|.. +..+ .+++ ...+||+|.+|+.+++++|.. +++++|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 578888999998899997 88998877776566666665 4433 4554 458999999999999999975 678999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEc
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
|||+..+|+.+|+++|+.+++|.
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEe
Confidence 99994399999999999999985
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.1e-11 Score=94.27 Aligned_cols=176 Identities=15% Similarity=0.131 Sum_probs=98.4
Q ss_pred cE-EEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCcC
Q 023578 69 RG-VVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPG 147 (280)
Q Consensus 69 k~-iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg 147 (280)
|+ |.+||||||.|....+.+.+++.++.+.......... ......+.....+..+.+...+. .......++|.||
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~g~~~~e~~~~~~~~~~--~~~~f~~l~p~~g 77 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDITG--YWDWEKWGITEPEFYEKLWRFYE--EPGFFSNLPPIPG 77 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHHHHTTTS----GGGGTS--SSHHHHHHHHSTTHHHHHHHHHT--STTTTTT--B-TT
T ss_pred CcEEEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHhhh--hhHHHHhCCCCHHHHHHHHHHHh--ChhhhcCCCccHH
Confidence 45 9999999999988888888888766652111110000 01112222222233333333211 1234567899999
Q ss_pred HHHHHHHhhhCCCeEEEEeCCchH-------HHHHHHHH-cCCc-ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 148 TAQLCGFLDSKKIRRGLITRNIKE-------AVDLFHNR-FGIT-FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 148 ~~~~l~~L~~~g~~i~ivS~~~~~-------~~~~~l~~-~g~~-fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
+.+++++|.+.|+.++++|..... .....+++ +|.. ++.++.+.. |. .++.+ ++
T Consensus 78 A~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~----------~v~~D----vl 140 (191)
T PF06941_consen 78 AVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT----------LVGGD----VL 140 (191)
T ss_dssp HHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG----------GC--S----EE
T ss_pred HHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC----------eEecc----EE
Confidence 999999999999888888765433 22334443 3432 444433211 21 12323 89
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
|+|++ .++..+...|+.++++..+++... ..-..+.|+.|+.+.|-+
T Consensus 141 IDD~~-~n~~~~~~~g~~~iLfd~p~Nr~~--------~~~~Rv~~W~ei~~~i~~ 187 (191)
T PF06941_consen 141 IDDRP-HNLEQFANAGIPVILFDQPYNRDE--------SNFPRVNNWEEIEDLILS 187 (191)
T ss_dssp EESSS-HHHSS-SSESSEEEEE--GGGTT----------TSEEE-STTSHHHHHHH
T ss_pred ecCCh-HHHHhccCCCceEEEEcCCCCCCC--------CCCccCCCHHHHHHHHHh
Confidence 99999 999999999999999987443221 245679999999888743
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-10 Score=94.89 Aligned_cols=56 Identities=11% Similarity=-0.067 Sum_probs=49.0
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChH
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPG 200 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~ 200 (280)
.||+.++|++|+++|++++|+|++.+..+...++.+|+. |+.+++++ ....||+++
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCcc
Confidence 499999999999999999999999999999999999999 88888754 556666554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.6e-10 Score=93.84 Aligned_cols=64 Identities=16% Similarity=0.238 Sum_probs=51.4
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d 267 (280)
+-.|..+++.+++++|++++++++|||+. ||++|++.+|+.+++- ++.++.+ ..+++++.+.++
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~~~~~~a~~-----na~~~~k---~~a~~~~~~n~~ 249 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGM-NDIEMLEAAGYGVAMG-----NADEELK---ALADYVTDSNNE 249 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcH-HhHHHHHhCCceeEec-----CchHHHH---HhCCEEecCCCC
Confidence 34467789999999999999999999999 9999999999987773 3333444 478888877544
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.6e-10 Score=94.17 Aligned_cols=102 Identities=18% Similarity=0.137 Sum_probs=83.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc-C-------Cc--ccceeeCCCC----------------
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF-G-------IT--FSPALSREFR---------------- 193 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~-g-------~~--fd~v~~~~~~---------------- 193 (280)
..+...||+.++|+.|+++|++++|+||+...+++.+++.+ | +. ||.++++..+
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 44567999999999999999999999999999999999996 6 44 8988765321
Q ss_pred --CCCCC-------h-----HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEc
Q 023578 194 --PYKPD-------P-----GPLLHICSTWEVQPNEVMMVGDSLKDDVACGK-RAGAFTCLLD 241 (280)
Q Consensus 194 --~~Kp~-------~-----~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~-~~G~~~i~v~ 241 (280)
..++. . .-...+.+.+|+.+++++||||+...|+..++ .+||.|++|.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 01111 1 13467888899999999999999999999998 8999999987
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.8e-10 Score=97.08 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=60.9
Q ss_pred CCCCCChHHHHHHHHhcCC---CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc-ccccCCCCCCEEEcCHH--
Q 023578 193 RPYKPDPGPLLHICSTWEV---QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSAD-DFTKSNLQPDFRVSSLT-- 266 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi---~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~~d~v~~~~~-- 266 (280)
..+-.|..+++.+++++|+ +++++++|||+. ||++|.+.+|..+++-+. .... .++..+..+++++....
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~-NDi~Ml~~ag~gvAM~~~---~~~~~~l~~~~~~~~~~~~~~~~~ 258 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGTRPTTLGLGDGP-NDAPLLDVMDYAVVVKGL---NREGVHLQDDDPARVYRTQREGPE 258 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCH-HHHHHHHhCCEEEEecCC---CCCCcccccccCCceEeccCCCcH
Confidence 3566778999999999999 999999999999 999999999998887431 1111 23223457888888776
Q ss_pred HHHHHHHhcc
Q 023578 267 EVLSILEANF 276 (280)
Q Consensus 267 dl~~~l~~~~ 276 (280)
.+.+.|+.++
T Consensus 259 g~~~~l~~~~ 268 (271)
T PRK03669 259 GWREGLDHFF 268 (271)
T ss_pred HHHHHHHHHH
Confidence 5777666654
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-09 Score=90.56 Aligned_cols=83 Identities=14% Similarity=0.066 Sum_probs=64.7
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCC--------------------------
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYK-------------------------- 196 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~K-------------------------- 196 (280)
.|++.++|++|+++|++++|+||+.+..+...++.+|+. |+.+++++...+|
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~ 229 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD 229 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence 499999999999999999999999999999999999999 8888775432222
Q ss_pred ----C-ChHHHHHHHHhcCCCC-CcEEEEcCCchhhH
Q 023578 197 ----P-DPGPLLHICSTWEVQP-NEVMMVGDSLKDDV 227 (280)
Q Consensus 197 ----p-~~~~~~~~~~~lgi~~-~~~v~iGDs~~~Di 227 (280)
| .|......+++.|+.. ..+--|+|-..||+
T Consensus 230 ~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 230 VKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred ccCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 1 3667778888888865 34556777664554
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.8e-10 Score=93.92 Aligned_cols=107 Identities=8% Similarity=0.052 Sum_probs=71.1
Q ss_pred CCeEEEEeCCch----HHHHHHHHHcCCcccceeeC----C-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHH
Q 023578 159 KIRRGLITRNIK----EAVDLFHNRFGITFSPALSR----E-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVAC 229 (280)
Q Consensus 159 g~~i~ivS~~~~----~~~~~~l~~~g~~fd~v~~~----~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~ 229 (280)
.+++.+...... ..+...++..+..+..++++ + ...+.+|+.+++.+++++|++++++++|||+. ||++|
T Consensus 112 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~-nD~~m 190 (236)
T TIGR02471 112 PFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSG-NDEEM 190 (236)
T ss_pred CeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCc-cHHHH
Confidence 356666554321 12334445555444444454 3 34678899999999999999999999999999 99999
Q ss_pred HHHcCCcEEEEcCCCCCCccccccCCCCCC----EEEcCHH--HHHHHHHh
Q 023578 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPD----FRVSSLT--EVLSILEA 274 (280)
Q Consensus 230 a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d----~v~~~~~--dl~~~l~~ 274 (280)
++.+|..+++ .++.++.+. .++ +++.+-. .+.+.|++
T Consensus 191 l~~~~~~iav-----~na~~~~k~---~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 191 LRGLTLGVVV-----GNHDPELEG---LRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred HcCCCcEEEE-----cCCcHHHHH---hhcCCcEEEcCCCChhHHHHHHHh
Confidence 9999987765 245555554 455 6776532 25555543
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.3e-09 Score=99.18 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=86.1
Q ss_pred cccCcCHHHHHHHhhhCC-CeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 142 LQIMPGTAQLCGFLDSKK-IRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g-~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
..++||+.+++++|+++| ++++++||.....++.+++++|++ .+++.- .+++|+ ..+++++..+++|+|||
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~--~p~~K~----~~v~~l~~~~~~v~~vG 454 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAEL--LPEDKL----AIVKELQEEGGVVAMVG 454 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccC--CHHHHH----HHHHHHHHcCCEEEEEE
Confidence 467899999999999999 999999999999999999999985 222211 112233 45555555677999999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHH
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILE 273 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~ 273 (280)
|+. +|+.+++++|+.+.+ +++.+.. +..+|+++. ++..+.+.++
T Consensus 455 Dg~-nD~~al~~A~vgia~-----g~~~~~~---~~~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 455 DGI-NDAPALAAADVGIAM-----GAGSDVA---IEAADIVLLNDDLSSLPTAID 500 (556)
T ss_pred CCh-hHHHHHhhCCEeEEe-----CCCCHHH---HHhCCEEEeCCCHHHHHHHHH
Confidence 999 999999999964443 1222222 247999998 7888877764
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.6e-08 Score=84.74 Aligned_cols=68 Identities=21% Similarity=0.180 Sum_probs=55.3
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc----CCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA----GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~----G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
.|..+++++++++|+..+++++|||+. ||..|.+.+ |+. |.|. ++. ..|.+.+.+..++..+|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~-nD~~mf~~~~~~~g~~-vavg----~a~-------~~A~~~l~~~~~v~~~L 240 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDL-TDEAGFAVVNRLGGIS-VKVG----TGA-------TQASWRLAGVPDVWSWL 240 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCc-cHHHHHHHHHhcCCeE-EEEC----CCC-------CcCeEeCCCHHHHHHHH
Confidence 456788899999999999999999999 999999998 654 4443 221 47889999999999999
Q ss_pred HhccC
Q 023578 273 EANFD 277 (280)
Q Consensus 273 ~~~~~ 277 (280)
..+.+
T Consensus 241 ~~l~~ 245 (266)
T PRK10187 241 EMITT 245 (266)
T ss_pred HHHHH
Confidence 87653
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.5e-09 Score=82.36 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=72.4
Q ss_pred CCcccCcCHHHHHHHhhhCCC-eEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-----CC-----C--------CCC-
Q 023578 140 DRLQIMPGTAQLCGFLDSKKI-RRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-----FR-----P--------YKP- 197 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~-~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-----~~-----~--------~Kp- 197 (280)
..++..||+.++++.+++.|. .+.|+|+.+..+++.+++.+|+. |..|++.- .| . .-|
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs 160 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPS 160 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence 567889999999999999985 99999999999999999999998 77776521 11 1 112
Q ss_pred ---ChHHHHHHH-H--hcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 198 ---DPGPLLHIC-S--TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 198 ---~~~~~~~~~-~--~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
|...+..+. + +-|+..++.+|+||+. +|+-......-.-+...
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~-nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGA-NDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCC-CCcCcchhcccCceecc
Confidence 222333322 2 2367788999999999 99877665543333333
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.9e-09 Score=98.00 Aligned_cols=116 Identities=16% Similarity=0.186 Sum_probs=87.9
Q ss_pred cccCcCHHHHHHHhhhCCC-eEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 142 LQIMPGTAQLCGFLDSKKI-RRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~-~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
..++||+.+.+++|+++|+ +++++||.....++.+++.+|++ .+++.-. +.+| ..++++++...++++|||
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~--p~~K----~~~i~~l~~~~~~v~~vG 432 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAELL--PEDK----LEIVKELREKYGPVAMVG 432 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhccC--cHHH----HHHHHHHHhcCCEEEEEe
Confidence 4678999999999999999 99999999999999999999986 2221111 1222 446666666678999999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
|+. +|+.+++++|+...+ . ..+.+... ..+|+++ +++.++.+++.
T Consensus 433 Dg~-nD~~al~~A~vgia~-g---~~~~~~~~---~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 433 DGI-NDAPALAAADVGIAM-G---ASGSDVAI---ETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred CCH-HHHHHHHhCCEEEEe-C---CCccHHHH---HhCCEEEECCCHHHHHHHHH
Confidence 999 999999999974443 1 12222222 4889999 89999988765
|
. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.4e-09 Score=75.04 Aligned_cols=124 Identities=16% Similarity=0.250 Sum_probs=101.0
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
.-.+++.+.+.++.|.+. ++++|.|+.....+.+..+..|++.+.++.+ .+++....+++.++-..+.|++||
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~------a~~e~K~~ii~eLkk~~~k~vmVG 100 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAG------ADPEMKAKIIRELKKRYEKVVMVG 100 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecc------cCHHHHHHHHHHhcCCCcEEEEec
Confidence 347899999999999999 9999999999999999999999885555433 344677788888887778999999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
|+. ||+.+.+++.+..+.+.+.+.|. +.. ..+|+++.++.|+.+++....+
T Consensus 101 nGa-ND~laLr~ADlGI~tiq~e~v~~--r~l---~~ADvvik~i~e~ldl~~~~~~ 151 (152)
T COG4087 101 NGA-NDILALREADLGICTIQQEGVPE--RLL---LTADVVLKEIAEILDLLKDTSE 151 (152)
T ss_pred CCc-chHHHhhhcccceEEeccCCcch--HHH---hhchhhhhhHHHHHHHhhcccc
Confidence 999 99999999988877776533332 222 4899999999999999877654
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.7e-09 Score=97.07 Aligned_cols=114 Identities=17% Similarity=0.228 Sum_probs=85.8
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGD 221 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGD 221 (280)
..++||+.+++++|+++|++++++||.....++.+.+.+|++ +++ +. .+++|.+ .+++++.++++|+||||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~-~~-~p~~K~~----~v~~l~~~~~~v~~VGD 474 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRA-EV-LPDDKAA----LIKELQEKGRVVAMVGD 474 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEc-cC-ChHHHHH----HHHHHHHcCCEEEEEeC
Confidence 357899999999999999999999999999999999999985 222 11 1233333 44444446789999999
Q ss_pred CchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 222 SLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 222 s~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
+. ||+.+++++|+...+ . ++.+.. ...+|+++ +++.++.++++
T Consensus 475 g~-nD~~al~~A~vgia~-g----~g~~~a---~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 475 GI-NDAPALAQADVGIAI-G----AGTDVA---IEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred CC-ccHHHHhhCCEEEEe-C----CcCHHH---HhhCCEEEeCCCHHHHHHHHH
Confidence 99 999999999985433 1 222222 24789999 48888888764
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-08 Score=81.14 Aligned_cols=44 Identities=18% Similarity=0.140 Sum_probs=41.1
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTC 238 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i 238 (280)
.+.+|+.+++.+++++|++++++++|||+. +|+.+++.+|+.++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~-nD~~~~~~~~~~va 203 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDSG-NDEEMFEVAGLAVA 203 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHcCCceE
Confidence 567888999999999999999999999999 99999999999765
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-08 Score=82.01 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=38.5
Q ss_pred CCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 196 Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
-.|+.+++.+++++|++++++++|||+. ||++|.+.+|..++.
T Consensus 178 ~~Kg~al~~l~~~lgi~~~~vi~~GD~~-NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 178 SSKGKAANWLKATYNQPDVKTLGLGDGP-NDLPLLEVADYAVVI 220 (221)
T ss_pred CCHHHHHHHHHHHhCCCCCcEEEECCCH-HHHHHHHhCCceEEe
Confidence 3466789999999999999999999999 999999999987653
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.4e-08 Score=84.58 Aligned_cols=84 Identities=10% Similarity=0.137 Sum_probs=60.0
Q ss_pred hCCCeEEEEeCCch-----HHHHHHHHHcCCcccceeeC----C-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhh
Q 023578 157 SKKIRRGLITRNIK-----EAVDLFHNRFGITFSPALSR----E-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDD 226 (280)
Q Consensus 157 ~~g~~i~ivS~~~~-----~~~~~~l~~~g~~fd~v~~~----~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~D 226 (280)
+.-+++.++..... ......+...++.+..++++ + ...+.+|..+++.+++++|++++++++|||+. ||
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~-ND 195 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG-ND 195 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh-hH
Confidence 34466777665322 22234445556555445554 3 34678899999999999999999999999999 99
Q ss_pred HHHHHHcCCcEEEEc
Q 023578 227 VACGKRAGAFTCLLD 241 (280)
Q Consensus 227 i~~a~~~G~~~i~v~ 241 (280)
++|++.+|..++.+.
T Consensus 196 ~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 196 IELFEIGSVRGVIVS 210 (249)
T ss_pred HHHHHccCCcEEEEC
Confidence 999999666666665
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.3e-08 Score=70.15 Aligned_cols=82 Identities=13% Similarity=0.093 Sum_probs=54.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchH---HHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKE---AVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~---~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
.++||+.+++++|+++|.+++++||++.. .....++.+|+. .+.++++. ......+++. .....++
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~--------~~~~~~l~~~-~~~~~v~ 84 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG--------MAAAEYLKEH-KGGKKVY 84 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH--------HHHHHHHHHH-TTSSEEE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH--------HHHHHHHHhc-CCCCEEE
Confidence 58999999999999999999999997533 344455888988 55566532 2223333332 2356788
Q ss_pred EEcCCchhhHHHHHHcCC
Q 023578 218 MVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~ 235 (280)
++|-.. ..+.++.+|+
T Consensus 85 vlG~~~--l~~~l~~~G~ 100 (101)
T PF13344_consen 85 VLGSDG--LREELREAGF 100 (101)
T ss_dssp EES-HH--HHHHHHHTTE
T ss_pred EEcCHH--HHHHHHHcCC
Confidence 888665 6667777764
|
... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=79.60 Aligned_cols=76 Identities=9% Similarity=-0.061 Sum_probs=55.4
Q ss_pred CCCCChHHHHHHHHhcCCC--CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCC---CCEEEcCHHH-
Q 023578 194 PYKPDPGPLLHICSTWEVQ--PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQ---PDFRVSSLTE- 267 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~--~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~---~d~v~~~~~d- 267 (280)
.+-.|..+++.+++++|++ .+++++|||+. ||++|.+.+|..+++-+ +.++.++++.. +++|+.+..+
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~-ND~~Ml~~ag~~vam~N-----a~~~~~~lk~~~~a~~~vt~~~~~d 246 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSP-NDLPLLEVVDLAVVVPG-----PNGPNVSLKPGDPGSFLLTPAPGPE 246 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCH-hhHHHHHHCCEEEEeCC-----CCCCccccCccCCCcEEEcCCCCcH
Confidence 4567778999999999999 99999999999 99999999999888733 33221222334 3488866433
Q ss_pred -HHHHHHhc
Q 023578 268 -VLSILEAN 275 (280)
Q Consensus 268 -l~~~l~~~ 275 (280)
+.+.|+++
T Consensus 247 Gva~~l~~~ 255 (256)
T TIGR01486 247 GWREALEHL 255 (256)
T ss_pred HHHHHHHHh
Confidence 55555543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.1e-08 Score=78.25 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=33.0
Q ss_pred ChHHHHHHHHhcCC--CCCcEEEEcCCchhhHHHHHHcCCcEE
Q 023578 198 DPGPLLHICSTWEV--QPNEVMMVGDSLKDDVACGKRAGAFTC 238 (280)
Q Consensus 198 ~~~~~~~~~~~lgi--~~~~~v~iGDs~~~Di~~a~~~G~~~i 238 (280)
|+...+.+++.+++ ++.++++|||+. ||+.|.+.+|+.++
T Consensus 182 K~~al~~l~~~~~~~~~~~~~i~~GD~~-nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 182 KGKAIKRLLDLYKLRPGAIESVGLGDSE-NDFPMFEVVDLAFL 223 (225)
T ss_pred HHHHHHHHHHHhccccCcccEEEEcCCH-HHHHHHHhCCCcEe
Confidence 44566777777765 677899999999 99999999999764
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-07 Score=72.66 Aligned_cols=94 Identities=20% Similarity=0.183 Sum_probs=61.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHH---HHHHH-----cCCcccceeeCCC----------CCCCC---ChHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD---LFHNR-----FGITFSPALSREF----------RPYKP---DPGP 201 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~---~~l~~-----~g~~fd~v~~~~~----------~~~Kp---~~~~ 201 (280)
...|++.+++++++++|++++++|++...... ..++. .++....++++.. ...+| |.+.
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~ 106 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIAC 106 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHH
Confidence 35699999999999999999999998877663 56666 2232224444321 12233 3445
Q ss_pred HHHHHHhcCCCCCcE-EEEcCCchhhHHHHHHcCCcE
Q 023578 202 LLHICSTWEVQPNEV-MMVGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 202 ~~~~~~~lgi~~~~~-v~iGDs~~~Di~~a~~~G~~~ 237 (280)
+..+.+.+.-..... ..+||.. +|+++=+++|+..
T Consensus 107 l~~i~~~~~~~~~~f~~~~gn~~-~D~~~y~~~gi~~ 142 (157)
T smart00775 107 LRDIKSLFPPQGNPFYAGFGNRI-TDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHhcCCCCCCEEEEeCCCc-hhHHHHHHcCCCh
Confidence 555555543222234 3588889 9999999999953
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.2e-08 Score=95.01 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=89.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
.++||+.+.+++|++.|++++++|+......+.+.+.+|+. .+++.-. |+....++++++..+++++||||+
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~~------p~~K~~~i~~l~~~~~~v~~vGDg 721 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGVL------PDGKAEAIKRLQSQGRQVAMVGDG 721 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCCC------HHHHHHHHHHHhhcCCEEEEEeCC
Confidence 66899999999999999999999999999999999999985 2332211 334456777788788899999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
. ||+.+++++|+..++ +++.+...+ .+...+..+++.++...++
T Consensus 722 ~-nD~~al~~Agvgia~-----g~g~~~a~~-~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 722 I-NDAPALAQADVGIAM-----GGGSDVAIE-TAAITLMRHSLMGVADALA 765 (834)
T ss_pred H-HHHHHHHhCCeeEEe-----cCCCHHHHH-hCCEEEecCCHHHHHHHHH
Confidence 9 999999999996555 233333333 3455556678888888875
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-07 Score=77.02 Aligned_cols=97 Identities=15% Similarity=0.012 Sum_probs=64.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHH---HHHHHHHcCCc-ccceeeCC-CCCCCCC----hHHHHHHHHhcC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA---VDLFHNRFGIT-FSPALSRE-FRPYKPD----PGPLLHICSTWE 210 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~---~~~~l~~~g~~-fd~v~~~~-~~~~Kp~----~~~~~~~~~~lg 210 (280)
...++.|++.++++.++++|++|+++||..... +...|.+.|++ ++.++-.. ....|+. .....++.+ -|
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~-~G 195 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLME-EG 195 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHh-CC
Confidence 356899999999999999999999999988655 66777888887 66655533 2223331 122222221 11
Q ss_pred CCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
..=+..|||.. +|+.. ..+|.++.-+.
T Consensus 196 --YrIv~~iGDq~-sDl~G-~~~~~RtFKLP 222 (229)
T TIGR01675 196 --YRIWGNIGDQW-SDLLG-SPPGRRTFKLP 222 (229)
T ss_pred --ceEEEEECCCh-HHhcC-CCccCceeeCC
Confidence 12256899999 99955 45666666554
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.70 E-value=5e-08 Score=80.91 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=57.6
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc-------CCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA-------GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~-------G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
.|...++.++++++++++++++|||+. +|+.+++.+ |..++.+.. +. .+..+++++++..++.
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~~----g~-----~~~~A~~~~~~~~~v~ 236 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIGS----GS-----KKTVAKFHLTGPQQVL 236 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEec----CC-----cCCCceEeCCCHHHHH
Confidence 346899999999999999999999999 999999999 666666641 21 1358999999999999
Q ss_pred HHHHhc
Q 023578 270 SILEAN 275 (280)
Q Consensus 270 ~~l~~~ 275 (280)
++|+.+
T Consensus 237 ~~L~~l 242 (244)
T TIGR00685 237 EFLGLL 242 (244)
T ss_pred HHHHHH
Confidence 998765
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.6e-08 Score=81.44 Aligned_cols=95 Identities=18% Similarity=0.237 Sum_probs=63.8
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCch---HHHHHHHHHcCCc-ccceee-CCCC-CC----CCChHHHHHHHHh-cC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIK---EAVDLFHNRFGIT-FSPALS-REFR-PY----KPDPGPLLHICST-WE 210 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---~~~~~~l~~~g~~-fd~v~~-~~~~-~~----Kp~~~~~~~~~~~-lg 210 (280)
..+.||+.++++.++++|+.|+++||... .....-|++.|+. .+.++- .+.. .. .-|......+.++ +.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 48899999999999999999999999544 4556677888877 465543 2211 11 1134455555555 43
Q ss_pred CCCCcEEEEcCCchhhHHHHHHc---CCcEEEEc
Q 023578 211 VQPNEVMMVGDSLKDDVACGKRA---GAFTCLLD 241 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~~---G~~~i~v~ 241 (280)
+ +++|||+. +|+..++.. |.+++.+.
T Consensus 194 I----i~~iGD~~-~D~~~~~~~~~~~~r~f~lP 222 (229)
T PF03767_consen 194 I----IANIGDQL-SDFSGAKTAGARAERWFKLP 222 (229)
T ss_dssp E----EEEEESSG-GGCHCTHHHHHHHTTEEE-T
T ss_pred E----EEEeCCCH-HHhhcccccccccceEEEcC
Confidence 4 78999999 999984433 44555554
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.4e-07 Score=91.72 Aligned_cols=123 Identities=21% Similarity=0.260 Sum_probs=95.2
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-C----------------CCCCCChHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-F----------------RPYKPDPGPLL 203 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~----------------~~~Kp~~~~~~ 203 (280)
++.||+.+.++.|++.|++++++||.....+..+.+.+|+. ++.+++++ . ......|+-..
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 66899999999999999999999999999999999999986 34444432 1 13345667777
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
.+.+.++-..+.+.|+||+. ||..++++|++...+ . ..+.+-.+ ..+|+++ +++..+...++
T Consensus 608 ~iv~~lq~~g~~v~mvGDGv-ND~pAl~~AdVGia~-g---~~g~~va~---~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGV-NDAPALKLADIGVAM-G---QTGTDVAK---EAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHHHHHHCCCEEEEECCCc-ccHHHHHhCCeeEec-C---CCcCHHHH---HhcCEEEcCCCHHHHHHHHH
Confidence 77777776678899999999 999999999975544 1 12222222 4889999 66999988775
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-06 Score=69.44 Aligned_cols=122 Identities=13% Similarity=0.111 Sum_probs=93.0
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-----ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-----FSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-----fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
...++++.+.++..+..|++++|.|+++...++.++..-+-. +++.+....| .|-....|..+.+.+|.++.++
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG-~K~e~~sy~~I~~~Ig~s~~ei 200 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIG-LKVESQSYKKIGHLIGKSPREI 200 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcccc-ceehhHHHHHHHHHhCCChhhe
Confidence 367999999999999999999999999988888777554432 2222222233 3666789999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
+|.-|.. ....+|+.+|+.+..+.+||+-+-.+.. ...--++.+|..|
T Consensus 201 LfLTd~~-~Ea~aa~~aGl~a~l~~rPgna~l~dd~---~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 201 LFLTDVP-REAAAARKAGLQAGLVSRPGNAPLPDDA---KVEYCVIWSFEIL 248 (254)
T ss_pred EEeccCh-HHHHHHHhcccceeeeecCCCCCCCccc---ccceeeeccchhh
Confidence 9999999 9999999999999999987665433222 2234556666554
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.8e-06 Score=71.58 Aligned_cols=99 Identities=15% Similarity=0.152 Sum_probs=75.7
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHH---HHHHcCCccccee-eC----------C-------------CCC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDL---FHNRFGITFSPAL-SR----------E-------------FRP 194 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~---~l~~~g~~fd~v~-~~----------~-------------~~~ 194 (280)
-...+++.++++.|+++|+++..+|.....+... -++++|++|.... .. . ...
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 3456889999999999999999999977665443 4467888743321 00 0 014
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHH----cCCcEEEEc
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKR----AGAFTCLLD 241 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~----~G~~~i~v~ 241 (280)
+-++..++...+++.|..|+.++||+|+. .++....+ .|+.++++.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFH 209 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEE
Confidence 56678999999999999999999999999 88876544 588888876
|
The function is not known. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.5e-07 Score=68.38 Aligned_cols=155 Identities=17% Similarity=0.094 Sum_probs=91.1
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (280)
+.=+|-||+|+|++=+.+.|...-+.+ .....+++ .-..+|+.....+-....|.+
T Consensus 62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~------------sPgs~DyL------------knq~FW~~vn~g~D~~SIPKe 117 (237)
T COG3700 62 PPIAVSFDIDDTVLFSSPGFWRGKKYF------------SPGSEDYL------------KNQVFWEKVNNGWDEFSIPKE 117 (237)
T ss_pred CCeeEeeccCCeeEecccccccCcccc------------CCChHHhh------------cCHHHHHHHhcCCccccchHH
Confidence 455799999999996555443322221 11111111 111223333333323345666
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCchHHHH----HHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNIKEAVD----LFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~~~~~~----~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
-+.+++.....+|-.++.+|+....-++ .+.+.+.+. ...++.++-. ||...--...+...++ -++.|
T Consensus 118 vA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~--k~~qy~Kt~~i~~~~~----~IhYG 191 (237)
T COG3700 118 VARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP--KPGQYTKTQWIQDKNI----RIHYG 191 (237)
T ss_pred HHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC--CcccccccHHHHhcCc----eEEec
Confidence 6788999999999999999996554333 344556665 2334444422 3322222345555555 48999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccc
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFT 252 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~ 252 (280)
||. +|+-+|+.+|.+.|-+-+-.+.....++
T Consensus 192 DSD-~Di~AAkeaG~RgIRilRAaNSTy~PlP 222 (237)
T COG3700 192 DSD-NDITAAKEAGARGIRILRAANSTYKPLP 222 (237)
T ss_pred CCc-hhhhHHHhcCccceeEEecCCccCCcCc
Confidence 999 9999999999999888764444443444
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.8e-08 Score=73.81 Aligned_cols=79 Identities=10% Similarity=0.075 Sum_probs=60.2
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---c-cceeeCCCCCCCCChHHHHHHHHhcCCCCCc
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---F-SPALSREFRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---f-d~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
....++||+.++|+.|++. +.++|+|++.+.++..+++.++.. | +.+++.+... .+ ..+.+-.-+|.+.+.
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~-~~---~~KdL~~i~~~d~~~ 129 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG-SP---HTKSLLRLFPADESM 129 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC-CC---ccccHHHHcCCCccc
Confidence 3567899999999999966 999999999999999999999877 6 5566655321 11 111122345778899
Q ss_pred EEEEcCCc
Q 023578 216 VMMVGDSL 223 (280)
Q Consensus 216 ~v~iGDs~ 223 (280)
++.|+|++
T Consensus 130 vvivDd~~ 137 (156)
T TIGR02250 130 VVIIDDRE 137 (156)
T ss_pred EEEEeCCH
Confidence 99999999
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.7e-07 Score=86.62 Aligned_cols=122 Identities=18% Similarity=0.195 Sum_probs=91.2
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcc-c-----ceeeCC-----------------CCCCCCCh
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF-S-----PALSRE-----------------FRPYKPDP 199 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~f-d-----~v~~~~-----------------~~~~Kp~~ 199 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+.. + ..+++. ....+..|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 568999999999999999999999999899999999999851 1 122221 11223345
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHHHH
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSILE 273 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~l~ 273 (280)
+-...+++.++-..+.+.|+||+. ||+.|.++|++..++- .+.+.. +..+|+++.+ +..+.+.+.
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~-ND~~alk~AdVGia~g-----~g~~~a---k~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGV-NDAPALKKADIGIAMG-----SGTEVA---KEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCc-chHHHHHhCCeeEECC-----CCcHHH---HHhcCeEEccCCHHHHHHHHH
Confidence 555677777776667888999999 9999999999965541 232222 3489999987 888888765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.8e-06 Score=74.11 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=39.4
Q ss_pred CCCCChHHHHHHHHhc---CCCCCcEEEEcCCchhhHHHHHHcC-CcEEE
Q 023578 194 PYKPDPGPLLHICSTW---EVQPNEVMMVGDSLKDDVACGKRAG-AFTCL 239 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~l---gi~~~~~v~iGDs~~~Di~~a~~~G-~~~i~ 239 (280)
.+-.|..+++.+++++ |++++++++|||+. ||++|.+.+| ..+++
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~-NDleMl~~ag~~gvam 220 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSG-NDAELFSVPDVYGVMV 220 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCH-HHHHHHhcCCCCEEEE
Confidence 4555778999999999 99999999999999 9999999999 45554
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.8e-06 Score=82.55 Aligned_cols=112 Identities=19% Similarity=0.220 Sum_probs=82.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
+++||+.+.+++|++.|++++++|+.....++.+.+.+|+++ +... .| +-...++++++ .+..++||||+
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~---~~~~----~p--~~K~~~v~~l~-~~~~v~mvGDg 637 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF---RAGL----LP--EDKVKAVTELN-QHAPLAMVGDG 637 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe---ecCC----CH--HHHHHHHHHHh-cCCCEEEEECC
Confidence 678999999999999999999999999999999999999862 1111 11 22233455555 34689999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||..+++++++..++- .+.+...+ .+|+++ +++.+|.+.++
T Consensus 638 i-NDapAl~~A~vgia~g-----~~~~~a~~---~adivl~~~~l~~l~~~i~ 681 (741)
T PRK11033 638 I-NDAPAMKAASIGIAMG-----SGTDVALE---TADAALTHNRLRGLAQMIE 681 (741)
T ss_pred H-HhHHHHHhCCeeEEec-----CCCHHHHH---hCCEEEecCCHHHHHHHHH
Confidence 9 9999999999766652 23333333 456655 67888877664
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.1e-07 Score=66.10 Aligned_cols=84 Identities=13% Similarity=0.213 Sum_probs=63.5
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCCh---HHHHHHHHhc-----
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDP---GPLLHICSTW----- 209 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~---~~~~~~~~~l----- 209 (280)
..+.++|.+.++++++|+.|+-+..+|=+...-+-..++.+++. |+.++. +|.| .++.++++.+
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi------ePhP~K~~ML~~llr~i~~er~ 111 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI------EPHPYKFLMLSQLLREINTERN 111 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe------cCCChhHHHHHHHHHHHHHhhc
Confidence 46789999999999999999999999977777777788999987 665443 3433 3555555543
Q ss_pred -CCCCCcEEEEcCCchhhHHHH
Q 023578 210 -EVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 210 -gi~~~~~v~iGDs~~~Di~~a 230 (280)
.+.|.+++|++|.. --+.-.
T Consensus 112 ~~ikP~~Ivy~DDR~-iH~~~I 132 (164)
T COG4996 112 QKIKPSEIVYLDDRR-IHFGNI 132 (164)
T ss_pred cccCcceEEEEeccc-ccHHHH
Confidence 47899999999988 544433
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.8e-05 Score=71.72 Aligned_cols=162 Identities=15% Similarity=0.071 Sum_probs=85.8
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCC-------------chHHHHHhcCCChhhHHH----HhhccChhHHHHHH-H
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGE-------------DEYKRVKAENPTGIDILH----HIESWSPDLQRHAY-Q 129 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~ 129 (280)
-+.++||+||||+.+...+...+.-.++. +....+............ .+.+++.++.+... .
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~~~~f~G~~~~el~~~~r~ 101 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFVFIAFAGLKIRDIELVSRS 101 (497)
T ss_pred ccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 47899999999997555444333322221 111111111111111111 22344444443332 2
Q ss_pred HHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-cCCc--------c--cceeeCCCCCCCC-
Q 023578 130 TIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-FGIT--------F--SPALSREFRPYKP- 197 (280)
Q Consensus 130 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~g~~--------f--d~v~~~~~~~~Kp- 197 (280)
...++... .+.|.+.+ .++++|.. +++|...+.+++.+.+. +|++ . ++.+++......+
T Consensus 102 ~l~~f~~~-----~l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c 172 (497)
T PLN02177 102 VLPKFYAE-----DVHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVL 172 (497)
T ss_pred HHHHHHHH-----hcCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCC
Confidence 22233222 14555544 44567754 99999999999999976 7865 1 2233332110001
Q ss_pred C-hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 198 D-PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 198 ~-~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
. ..-...+.+.+|.+... +++|||. +|..+...|+-.. .|+
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~-~aYgDS~-sD~plL~~a~e~y-~V~ 214 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPD-LGLGDRE-TDHDFMSICKEGY-MVP 214 (497)
T ss_pred ccHHHHHHHHHHhCCCCce-EEEECCc-cHHHHHHhCCccE-EeC
Confidence 1 11223333556755444 8999999 9999999999653 444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.6e-06 Score=79.84 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=48.8
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCC--cEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGA--FTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~--~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
|..+++.+++ +++++.++++||+. ||..|.+.++. .++.+. .. ...|++++.+.+|+.++|+.+
T Consensus 658 KG~al~~ll~--~~~~d~vl~~GD~~-nDe~Mf~~~~~~~~~v~vG----~~-------~s~A~~~l~~~~eV~~~L~~l 723 (726)
T PRK14501 658 KGRAVRRLLE--AGPYDFVLAIGDDT-TDEDMFRALPETAITVKVG----PG-------ESRARYRLPSQREVRELLRRL 723 (726)
T ss_pred HHHHHHHHHh--cCCCCEEEEECCCC-ChHHHHHhcccCceEEEEC----CC-------CCcceEeCCCHHHHHHHHHHH
Confidence 4445556665 56788999999999 99999999742 233332 11 258899999999999999876
Q ss_pred cC
Q 023578 276 FD 277 (280)
Q Consensus 276 ~~ 277 (280)
.+
T Consensus 724 ~~ 725 (726)
T PRK14501 724 LD 725 (726)
T ss_pred hc
Confidence 53
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.43 E-value=7e-07 Score=67.10 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc---CCcccceeeCCCCCCCCChHHH
Q 023578 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF---GITFSPALSREFRPYKPDPGPL 202 (280)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~---g~~fd~v~~~~~~~~Kp~~~~~ 202 (280)
++++..+++......+..+..++...|..++++ .+++.+|.......+..-..+ .+.++.+.--+ ...|
T Consensus 55 e~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g-~h~K------ 126 (194)
T COG5663 55 EFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVG-LHHK------ 126 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhc-cccc------
Confidence 334444444333444456677888889999988 688888887766655443333 33355532110 0112
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccCC
Q 023578 203 LHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDL 278 (280)
Q Consensus 203 ~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~~ 278 (280)
-.+++.++++ +++.|+..|-++.|+++|++++.++.+.+ +... ..+-..+.++.|..+++++.++=
T Consensus 127 V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~yn--Rkp~----~~niiR~~~w~e~y~~vd~~~kR 192 (194)
T COG5663 127 VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYN--RKPA----AKNIIRANNWAEAYEWVDSRLKR 192 (194)
T ss_pred chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCccc--ccch----HHHHHHHHhHHHHHHHHHHHhcc
Confidence 2567777877 89999997888889999999999997433 2211 23334467888888888877653
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.4e-06 Score=70.93 Aligned_cols=44 Identities=20% Similarity=0.439 Sum_probs=35.1
Q ss_pred CCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 196 Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
-.|...++.+++++++++++++++|||. ||+.|. ..+...|.|.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSg-ND~~mL-~~~~~~vvV~ 207 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSG-NDLEML-EGGDHGVVVG 207 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSG-GGHHHH-CCSSEEEE-T
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCC-CcHHHH-cCcCCEEEEc
Confidence 3466789999999999999999999999 999999 6666777776
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.3e-06 Score=71.87 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=52.6
Q ss_pred CChHHHHHHHHhcCCCCCc---EEEEcCCchhhHHHHHH-----cCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 197 PDPGPLLHICSTWEVQPNE---VMMVGDSLKDDVACGKR-----AGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~---~v~iGDs~~~Di~~a~~-----~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
.|...++.+++++|++..+ .+||||+. +|..|.+. .|+. |.|. .+.. ...|.|.+.+..|+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~-TDedmF~~L~~~~~G~~-I~Vg----n~~~-----~t~A~y~L~dp~eV 369 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDR-TDEDAFKVLREGNRGYG-ILVS----SVPK-----ESNAFYSLRDPSEV 369 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCc-hHHHHHHhhhccCCceE-EEEe----cCCC-----CccceEEcCCHHHH
Confidence 4667888999999987653 38999999 99999996 3554 4443 1211 25789999999999
Q ss_pred HHHHHhccC
Q 023578 269 LSILEANFD 277 (280)
Q Consensus 269 ~~~l~~~~~ 277 (280)
.++|+.+..
T Consensus 370 ~~~L~~L~~ 378 (384)
T PLN02580 370 MEFLKSLVT 378 (384)
T ss_pred HHHHHHHHH
Confidence 999987643
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.2e-06 Score=70.67 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=61.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchH---HHHHHHHHcCCc-ccceeeCCCC-CCCCChHHHHHH-HHhcC-CC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKE---AVDLFHNRFGIT-FSPALSREFR-PYKPDPGPLLHI-CSTWE-VQ 212 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~---~~~~~l~~~g~~-fd~v~~~~~~-~~Kp~~~~~~~~-~~~lg-i~ 212 (280)
...++.|++.++.+.++++|++|+++||.... .....|.+.|+. .+.++-...+ ..+.+..-++.. .+++- -.
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eG 221 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEG 221 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcC
Confidence 35678999999999999999999999998653 344556677876 5555543221 222222222211 11110 01
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
..=+..|||.. +|+......+-++.-+.+
T Consensus 222 YrIv~~iGDq~-sDl~G~~~g~~RtFKLPN 250 (275)
T TIGR01680 222 YNIVGIIGDQW-NDLKGEHRGAIRSFKLPN 250 (275)
T ss_pred ceEEEEECCCH-HhccCCCccCcceecCCC
Confidence 12357899999 999655422346655553
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.7e-06 Score=75.02 Aligned_cols=46 Identities=9% Similarity=0.049 Sum_probs=41.3
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEE--cCCchhhHHHHHHcCCcEEEEc
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMV--GDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~i--GDs~~~Di~~a~~~G~~~i~v~ 241 (280)
+-.|..+++.+++.+|++.++++.| ||+. ||+.|.+.+|..+++-.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~-NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSE-NDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcH-hhHHHHHhCCceEEEcC
Confidence 5577899999999999999999999 9999 99999999999877744
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=77.48 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=55.8
Q ss_pred CCCCChHHHHHHHH---hcCCCCCcEEEEcCCchhhHHHHHHcCC-------------cEEEEcCCCCCCccccccCCCC
Q 023578 194 PYKPDPGPLLHICS---TWEVQPNEVMMVGDSLKDDVACGKRAGA-------------FTCLLDETGRYSADDFTKSNLQ 257 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~---~lgi~~~~~v~iGDs~~~Di~~a~~~G~-------------~~i~v~~~~~~~~~~~~~~~~~ 257 (280)
.+-.|...++.+++ .+|+.++++++|||+. ||..|.+.++- .+|.|.. + ...
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~-nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~----~-------~S~ 826 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDR-SDEDMFEVITSSMAGPSIAPRAEVFACTVGQ----K-------PSK 826 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCc-cHHHHHHHhhhhccCCcccccccceeEEECC----C-------Ccc
Confidence 34456678888864 4689999999999999 99999998862 2333321 1 258
Q ss_pred CCEEEcCHHHHHHHHHhccCC
Q 023578 258 PDFRVSSLTEVLSILEANFDL 278 (280)
Q Consensus 258 ~d~v~~~~~dl~~~l~~~~~~ 278 (280)
|.|.+.+..|+.++|+.+.+.
T Consensus 827 A~y~L~d~~eV~~lL~~L~~~ 847 (854)
T PLN02205 827 AKYYLDDTAEIVRLMQGLASV 847 (854)
T ss_pred CeEecCCHHHHHHHHHHHHhc
Confidence 889999999999999987653
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.7e-06 Score=61.19 Aligned_cols=48 Identities=4% Similarity=0.018 Sum_probs=38.4
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchH---------------HHHHHHHHcCCcccceeeC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKE---------------AVDLFHNRFGITFSPALSR 190 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~---------------~~~~~l~~~g~~fd~v~~~ 190 (280)
.+.+++.+.++.++++|+.++++|+.... .+...+++.++.+|.++.+
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~ 86 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVG 86 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeC
Confidence 47788999999999999999999997654 3456777888888777653
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.4e-06 Score=65.91 Aligned_cols=84 Identities=20% Similarity=0.208 Sum_probs=60.9
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHH----HHHHHHHcCCc---ccceeeCCCCCCCCChHHHHHHHHhcCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA----VDLFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~----~~~~l~~~g~~---fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
....+.||+.|+++..-++|..|..+||+..+. ...-+.++|++ -+.++-- ...|++..-++.+.+-
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk--k~~k~Ke~R~~~v~k~---- 192 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK--KDKKSKEVRRQAVEKD---- 192 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe--eCCCcHHHHHHHHhhc----
Confidence 356899999999999999999999999987765 33455677776 2222222 3446777777777663
Q ss_pred CCcEEEEcCCchhhHHHH
Q 023578 213 PNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a 230 (280)
.+-++.|||+. .|....
T Consensus 193 ~~iVm~vGDNl-~DF~d~ 209 (274)
T COG2503 193 YKIVMLVGDNL-DDFGDN 209 (274)
T ss_pred cceeeEecCch-hhhcch
Confidence 44589999999 887543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.7e-06 Score=76.23 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=84.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.||+.+.+++|++.|++++++|+.....++.+.+.+|++ .+++. -.|+-...+++++.-....+.|+||+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~------~~PedK~~~v~~lq~~g~~VamvGDG 517 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAE------ATPEDKIALIRQEQAEGKLVAMTGDG 517 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcC------CCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 66899999999999999999999999999999999999984 33331 12343444444444344579999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||..+.+++++..++- .+.+..+ ..+|+++ +++..+.+.++
T Consensus 518 ~-NDapAL~~AdvGiAm~-----~gt~~ak---eaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 518 T-NDAPALAQADVGVAMN-----SGTQAAK---EAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred c-chHHHHHhCCEeEEeC-----CCCHHHH---HhCCEEECCCCHHHHHHHHH
Confidence 9 9999999999987762 2333333 3677776 45777766654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.5e-06 Score=67.18 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=56.6
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
...+.||+.++|+.+.+. +.++|.|.+...+++.+++.+.-. |+.++..+ ....+. .. .+-++.+|-+.+++
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~-~~--~KdL~~l~~~~~~v 109 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKG-SY--IKDLSKLGRDLDNV 109 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETT-EE--E--GGGSSS-GGGE
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccc-cc--ccchHHHhhccccE
Confidence 456799999999999766 999999999999999999998863 77777644 221111 11 25677778788999
Q ss_pred EEEcCCchhh
Q 023578 217 MMVGDSLKDD 226 (280)
Q Consensus 217 v~iGDs~~~D 226 (280)
|+|+|++ .-
T Consensus 110 vivDD~~-~~ 118 (159)
T PF03031_consen 110 VIVDDSP-RK 118 (159)
T ss_dssp EEEES-G-GG
T ss_pred EEEeCCH-HH
Confidence 9999999 53
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.2e-06 Score=68.99 Aligned_cols=35 Identities=14% Similarity=0.069 Sum_probs=27.8
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHH
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN 178 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~ 178 (280)
+-|...+.|++++++|+.++++|++....+...++
T Consensus 23 is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 23 ITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 44556778899999999999999988777666554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.6e-05 Score=74.48 Aligned_cols=114 Identities=13% Similarity=0.102 Sum_probs=88.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.||+.+.+++||+.|+++..+|+.+...+..+.+.+|++ .+++ .-.|+-...+.+.++-....+.|+||+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A------~~~PedK~~iV~~lQ~~G~~VaMtGDG 512 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVA------ECKPEDKINVIREEQAKGHIVAMTGDG 512 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEc------CCCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 56899999999999999999999999999999999999985 2322 223455566666666555668899999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||..+.++|.+..++- .+.+-.+ ..+|.|. +++..+.+.++
T Consensus 513 v-NDAPALa~ADVGIAMg-----sGTdvAk---eAADiVLldd~ls~Iv~av~ 556 (673)
T PRK14010 513 T-NDAPALAEANVGLAMN-----SGTMSAK---EAANLIDLDSNPTKLMEVVL 556 (673)
T ss_pred h-hhHHHHHhCCEEEEeC-----CCCHHHH---HhCCEEEcCCCHHHHHHHHH
Confidence 9 9999999999977662 3333333 3788887 46777777664
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.8e-06 Score=67.19 Aligned_cols=42 Identities=12% Similarity=-0.004 Sum_probs=33.7
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcC----CchhhHHHHHHcCCcEEEEc
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGD----SLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGD----s~~~Di~~a~~~G~~~i~v~ 241 (280)
.+-.|..+++.++ +++++++||| +. ||++|.+.-|+.++.|.
T Consensus 186 ~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~-ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 186 QGWDKTYCLQFLE-----DFDEIHFFGDKTYEGG-NDHEIFESERTIGHTVT 231 (245)
T ss_pred CCCCHHHHHHHhc-----CcCeEEEEeccCCCCC-CcHHHHhCCCcceEEeC
Confidence 4455566666666 8999999999 68 99999988898888765
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=78.68 Aligned_cols=122 Identities=14% Similarity=0.047 Sum_probs=89.8
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-C----------------CCCCCChHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-F----------------RPYKPDPGPLLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~----------------~~~Kp~~~~~~~~ 205 (280)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.-+.+++++ . ....-.|+-...+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 5679999999999999999999999999999999999999633344331 1 1223345555666
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
.+.+.-...-+.|+||+. ||..+.++|.+..++- .+.+-.+ ..+|.|+ +++..+.+.++
T Consensus 630 V~~Lq~~G~vVam~GDGv-NDaPALk~ADVGIAmg-----~gtdvAk---eaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 630 VTLLKREGHVVGFMGDGI-NDAPALRAADIGISVD-----GAVDIAR---EAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred HHHHHHCCCEEEEECCCc-chHHHHHhCCEEEEeC-----CcCHHHH---HhCCEEEecCChHHHHHHHH
Confidence 666655556688999999 9999999999877662 2322233 4888888 56777766654
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.6e-05 Score=58.46 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=57.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHH---HHHHHHc-----CCcccceeeC----------CCCCCCCChHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAV---DLFHNRF-----GITFSPALSR----------EFRPYKPDPGPLLH 204 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~---~~~l~~~-----g~~fd~v~~~----------~~~~~Kp~~~~~~~ 204 (280)
...||+.++++.+.++||++.-+|+.+.... +..++.. +++.-.++.+ |.-.. +|+.|+.
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~--~p~~fK~ 104 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISK--DPEEFKI 104 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhcccccc--ChHHHHH
Confidence 4679999999999999999999999775443 3445544 4431112222 32222 3444432
Q ss_pred -----HHHhcCC-CCCcEEEEcCCchhhHHHHHHcCCc
Q 023578 205 -----ICSTWEV-QPNEVMMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 205 -----~~~~lgi-~~~~~v~iGDs~~~Di~~a~~~G~~ 236 (280)
+...+.- ...=...+|+.. +|+.+=+++|+.
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~-tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRS-TDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcH-HHHHHHHHcCCC
Confidence 3333321 122245799999 999999999995
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=7.4e-06 Score=68.41 Aligned_cols=40 Identities=10% Similarity=0.132 Sum_probs=34.7
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
..+.+.+.|++|+++|++++++|+.....+..+.+.+++.
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3445677899999999999999999999999999999875
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.4e-05 Score=72.51 Aligned_cols=114 Identities=16% Similarity=0.167 Sum_probs=87.4
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.||+.+.+++||+.|++++++|+.+...++.+.+.+|++ .+++ .-.|+-...+.++++-...-+.|+||+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A------~~~PedK~~iV~~lQ~~G~~VaMtGDG 516 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLA------EATPEDKLALIRQEQAEGRLVAMTGDG 516 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEc------cCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 56899999999999999999999999999999999999985 3332 123455556666665555668999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~ 273 (280)
. ||..+.+++.+..++- .+.+-.+ ..+|.++- ++..+.+.++
T Consensus 517 v-NDAPALa~ADVGIAMg-----sGTdvAk---eAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 517 T-NDAPALAQADVGVAMN-----SGTQAAK---EAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred c-chHHHHHhCCEeEEeC-----CCCHHHH---HhCCEEEeCCCHHHHHHHHH
Confidence 9 9999999999987762 3333333 37777774 6777777765
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.1e-05 Score=76.56 Aligned_cols=122 Identities=16% Similarity=0.059 Sum_probs=87.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-C----------------CCCCCChHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-F----------------RPYKPDPGPLLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~----------------~~~Kp~~~~~~~~ 205 (280)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.-+.++++. . ....-.|+-...+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~i 594 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRI 594 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHH
Confidence 5679999999999999999999999999999999999998522233321 1 1122334555555
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
.+.+.-....+.|+||+. ||..+.++|.+..++- .+.+-.+ ..+|.|+ +++..+...++
T Consensus 595 V~~lq~~G~vVam~GDGv-NDapALk~AdVGIAmg-----~gtdvAk---~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 595 IGLLKKAGHTVGFLGDGI-NDAPALRKADVGISVD-----TAADIAK---EASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred HHHHHhCCCEEEEECCCc-ccHHHHHhCCEEEEeC-----CccHHHH---HhCCEEEecCChHHHHHHHH
Confidence 555554456788999999 9999999999987662 2222223 4788877 56766666554
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.8e-05 Score=71.67 Aligned_cols=114 Identities=17% Similarity=0.233 Sum_probs=84.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.|+..+.+++|++.|++++++|+.+...++.+.+.+|++ .+++.- .|+-.....+++.-....+.||||+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId--~v~Ael------lPedK~~~V~~l~~~g~~VamVGDG 608 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID--EVRAEL------LPEDKAEIVRELQAEGRKVAMVGDG 608 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--hheccC------CcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 67899999999999999999999999999999999999984 333221 2244455556665445689999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||..+...+.+..++- .|.+-..+ .+|.++ +++..+...++
T Consensus 609 I-NDAPALA~AdVGiAmG-----~GtDvA~e---aADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 609 I-NDAPALAAADVGIAMG-----SGTDVAIE---AADVVLMRDDLSAVPEAID 652 (713)
T ss_pred c-hhHHHHhhcCeeEeec-----CCcHHHHH---hCCEEEecCCHHHHHHHHH
Confidence 9 9999999998876662 23333332 666665 45777777654
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.4e-05 Score=76.41 Aligned_cols=122 Identities=14% Similarity=0.056 Sum_probs=89.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-C----------------CCCCCChHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-F----------------RPYKPDPGPLLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~----------------~~~Kp~~~~~~~~ 205 (280)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.-+.++++. . ....-.|+-...+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~i 629 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRV 629 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHH
Confidence 5679999999999999999999999999999999999998522233321 1 1223345556666
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
.+.+.-...-+.|+||+. ||..+.++|.+..++- .+.+-.+ ..+|.|+ +++..+...++
T Consensus 630 V~~Lq~~G~vVamtGDGv-NDaPALk~ADVGIAmg-----~gtdvAk---eaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 630 LKALQANGHTVGFLGDGI-NDAPALRDADVGISVD-----SGADIAK---ESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred HHHHHhCCCEEEEECCCc-hhHHHHHhCCEEEEeC-----cccHHHH---HhcCEEEecCChHHHHHHHH
Confidence 666655556789999999 9999999999876652 2332233 4888888 57777777664
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.7e-05 Score=68.71 Aligned_cols=102 Identities=18% Similarity=0.130 Sum_probs=69.9
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-cCC------c----ccceeeCCCC---------------
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-FGI------T----FSPALSREFR--------------- 193 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~g~------~----fd~v~~~~~~--------------- 193 (280)
..+...|.+..+|+.||++|.++.++||+.-+++...++. +|- + ||.|++...+
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEET
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEEC
Confidence 3455578899999999999999999999999999887754 444 3 8888753210
Q ss_pred -CCCC---------------ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEc
Q 023578 194 -PYKP---------------DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA-GAFTCLLD 241 (280)
Q Consensus 194 -~~Kp---------------~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~-G~~~i~v~ 241 (280)
.++. ...-...+++.+|+...+++||||+...|+...+.. ||+|++|-
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 0110 112356778889999999999999998999988887 99999986
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.7e-05 Score=75.68 Aligned_cols=123 Identities=13% Similarity=0.108 Sum_probs=89.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-c-cceeeCC-----------------CCCCCCChHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-F-SPALSRE-----------------FRPYKPDPGPLL 203 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-f-d~v~~~~-----------------~~~~Kp~~~~~~ 203 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+. - ..+++++ .....-.|+-..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 56799999999999999999999999999999999999985 1 1233221 011233445555
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHH
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILE 273 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~ 273 (280)
.+.+.+.-....+.|+||+. ||..+.++|.+..++- ..+.+-.+ ..+|+++. +|..+...+.
T Consensus 659 ~iV~~lq~~g~vVam~GDGv-NDapALk~AdVGIAmg----~~gtdvAk---~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGT-NDAPALKLADVGFSMG----ISGTEVAK---EASDIILLDDNFASIVRAVK 722 (941)
T ss_pred HHHHHHHHCCCEEEEECCCC-chHHHHHhCCcceecC----CCccHHHH---HhCCEEEecCCHHHHHHHHH
Confidence 55555554455789999999 9999999999877652 12332233 47899887 7888887764
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.9e-05 Score=65.35 Aligned_cols=89 Identities=11% Similarity=0.007 Sum_probs=67.1
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHH---HHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEA---VDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~---~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
-.++||+.++|+.|+++|++++++||+.... +...++.+|+. ++.++++. ......+++.+....+.
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~--------~~~~~~l~~~~~~~~~~ 114 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS--------FAAAAYLKSINFPKDKK 114 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH--------HHHHHHHHhhccCCCCE
Confidence 3578999999999999999999999987333 33445778887 56666542 24455666666655556
Q ss_pred EEEcCCchhhHHHHHHcCCcEEE
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
++++++. .+.+.++.+|+.++.
T Consensus 115 V~viG~~-~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 115 VYVIGEE-GILEELELAGFQYLG 136 (311)
T ss_pred EEEEcCH-HHHHHHHHCCCEEec
Confidence 8888888 899999999998764
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.6e-05 Score=66.94 Aligned_cols=88 Identities=10% Similarity=0.131 Sum_probs=69.6
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-----CCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-----FRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-----~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
++-...+.+..|+++|+-++|+|-+....++..+++.. +.++..+ ...-.||.+-+.++++++|+..+..+|
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp---~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvF 332 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP---DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVF 332 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC---CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEE
Confidence 34445678999999999999999888888888887754 2222211 123468889999999999999999999
Q ss_pred EcCCchhhHHHHHHcCC
Q 023578 219 VGDSLKDDVACGKRAGA 235 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~ 235 (280)
++|++ ...+-.+.-+-
T Consensus 333 iDD~p-~ErE~vk~~~~ 348 (574)
T COG3882 333 IDDNP-AERELVKRELP 348 (574)
T ss_pred ecCCH-HHHHHHHhcCc
Confidence 99999 99998888775
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.5e-05 Score=73.24 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=86.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-C----------------------CCCCCCh
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-F----------------------RPYKPDP 199 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~----------------------~~~Kp~~ 199 (280)
++.|++.+.++.|++.|+++.++|+.....++.+.+.+|+. +.+++++ . ...+-.|
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLG-TNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC-CCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 67899999999999999999999999999999999999985 1121111 0 1223344
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHH
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILE 273 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~ 273 (280)
+-...+.+.+.-....+.|+||+. ||..+.++|.+..++ . .+.+-.+ ..+|.++- ++..+...++
T Consensus 521 e~K~~iV~~lq~~G~~VamvGDGv-NDapAL~~AdVGIAm-~----~gtdvAk---eaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 521 EHKYEIVEILQKRGHLVGMTGDGV-NDAPALKKADVGIAV-A----GATDAAR---SAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCc-ccHHHHHhCCeeEEe-c----CCcHHHH---HhCCEEEEcCChHHHHHHHH
Confidence 555566666655556799999999 999999999987665 2 2222223 36777764 5666666554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0003 Score=61.04 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=50.9
Q ss_pred CChHHHHHHHHhcCCCC---CcEEEEcCCchhhHHHHHHcC----CcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 197 PDPGPLLHICSTWEVQP---NEVMMVGDSLKDDVACGKRAG----AFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~---~~~v~iGDs~~~Di~~a~~~G----~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
.|...++.+++.+|... .-.+|+||.. +|-.+.+.+. -..|.|.. ... ...|.|.+.+..|+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~-TDEDaF~~L~~~~~G~gI~VG~----~~k-----~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDR-TDEDAFKMLRDRGEGFGILVSK----FPK-----DTDASYSLQDPSEVM 352 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCC-ccHHHHHHHhhcCCceEEEECC----CCC-----CCcceEeCCCHHHHH
Confidence 35567788888887642 2489999999 9998888762 13455542 011 258999999999999
Q ss_pred HHHHhccC
Q 023578 270 SILEANFD 277 (280)
Q Consensus 270 ~~l~~~~~ 277 (280)
++|..+..
T Consensus 353 ~fL~~L~~ 360 (366)
T PLN03017 353 DFLARLVE 360 (366)
T ss_pred HHHHHHHH
Confidence 99987754
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00014 Score=59.92 Aligned_cols=85 Identities=14% Similarity=0.070 Sum_probs=65.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCC--------------------------
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRP-------------------------- 194 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~-------------------------- 194 (280)
...|.+.+.|..|++.|..+++=|-|.++++...++++++. ||.++++....
T Consensus 142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 35788899999999999999999999999999999999998 99998742110
Q ss_pred ----CCC-ChHHHHHHHHhcCCCCC-cEEEEcCCchhhH
Q 023578 195 ----YKP-DPGPLLHICSTWEVQPN-EVMMVGDSLKDDV 227 (280)
Q Consensus 195 ----~Kp-~~~~~~~~~~~lgi~~~-~~v~iGDs~~~Di 227 (280)
+-| .|......+++.|+..- .+--|+|-..||+
T Consensus 222 ~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 222 TNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred CcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 012 36677888888888653 4456777664554
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00023 Score=61.52 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=48.7
Q ss_pred CChHHHHHHHHhcCCCCC---cEEEEcCCchhhHHHHHHc-----CCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 197 PDPGPLLHICSTWEVQPN---EVMMVGDSLKDDVACGKRA-----GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~---~~v~iGDs~~~Di~~a~~~-----G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
.|...+..++++++.... -.+|+||.. +|-.+.+.+ |+ .|.|.. +. ....|+|.+.+..|+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~-TDEDaF~~L~~~~~G~-gI~Vg~----~~-----k~T~A~y~L~dp~eV 337 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDR-TDEDAFKILRDKKQGL-GILVSK----YA-----KETNASYSLQEPDEV 337 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCC-cHHHHHHHHhhcCCCc-cEEecc----CC-----CCCcceEeCCCHHHH
Confidence 355667777777765432 279999999 999888765 32 344431 11 135899999999999
Q ss_pred HHHHHhccC
Q 023578 269 LSILEANFD 277 (280)
Q Consensus 269 ~~~l~~~~~ 277 (280)
.++|..+..
T Consensus 338 ~~~L~~L~~ 346 (354)
T PLN02151 338 MEFLERLVE 346 (354)
T ss_pred HHHHHHHHH
Confidence 999887643
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.88 E-value=9.1e-05 Score=73.42 Aligned_cols=123 Identities=16% Similarity=0.139 Sum_probs=89.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-c-----------cceeeCC-C----------------C
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-F-----------SPALSRE-F----------------R 193 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-f-----------d~v~~~~-~----------------~ 193 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+. - ..++++. . .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 67899999999999999999999999999999999999984 1 1233332 1 1
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~ 271 (280)
...-.|+-...+.+.+.-....+.|+||+. ||..+.+.|++..++-. .+.+-.+ ..+|+++.+ |..+...
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGv-NDapaLk~AdVGIAmg~----~gt~vak---~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGV-NDSPSLKMANVGIAMGI----NGSDVAK---DASDIVLSDDNFASILNA 797 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCc-chHHHHHhCCccEecCC----CccHHHH---HhcCEEEecCCHHHHHHH
Confidence 122344555555665554456789999999 99999999999876521 2222222 488999854 8888777
Q ss_pred HH
Q 023578 272 LE 273 (280)
Q Consensus 272 l~ 273 (280)
+.
T Consensus 798 i~ 799 (1053)
T TIGR01523 798 IE 799 (1053)
T ss_pred HH
Confidence 64
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00059 Score=50.82 Aligned_cols=92 Identities=16% Similarity=0.233 Sum_probs=59.8
Q ss_pred ccCcCHHHHHHHhhhC-C-CeEEEEeCC--------chHHHHHHHHHcCCc-ccceeeCCCCCCCCChHHHHHHHH-hcC
Q 023578 143 QIMPGTAQLCGFLDSK-K-IRRGLITRN--------IKEAVDLFHNRFGIT-FSPALSREFRPYKPDPGPLLHICS-TWE 210 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~-g-~~i~ivS~~--------~~~~~~~~l~~~g~~-fd~v~~~~~~~~Kp~~~~~~~~~~-~lg 210 (280)
...|....-+++++.. | ..+.++||+ ..+.++.+.++.|+. .. ....|| ..-....+ .+|
T Consensus 61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVlR------Hs~kKP--~ct~E~~~y~~~ 132 (190)
T KOG2961|consen 61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVLR------HSVKKP--ACTAEEVEYHFG 132 (190)
T ss_pred ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceEe------ecccCC--CccHHHHHHHhC
Confidence 4555555556666653 3 578899883 223345555677765 11 112244 22223222 344
Q ss_pred ----CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 211 ----VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 211 ----i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
..++|++||||..-.|+-+|...|-..+|..+
T Consensus 133 Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~ 168 (190)
T KOG2961|consen 133 NSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEP 168 (190)
T ss_pred CcccCChhHeEEEccchhhhHhhhhhccceeEEecc
Confidence 57899999999998999999999999999875
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.81 E-value=4.9e-05 Score=64.95 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=69.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCC------------chHHHHHHHHHcCCcccceee-CCCCCCCCChHHHHHHHHhc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRN------------IKEAVDLFHNRFGITFSPALS-REFRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~------------~~~~~~~~l~~~g~~fd~v~~-~~~~~~Kp~~~~~~~~~~~l 209 (280)
.++|.+..=++.|.+.||.++|.||. ...-++.+...++++|..... .....+||...+++...+..
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~ 183 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLE 183 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHh
Confidence 56788888899999999999999983 223356677778887554333 23458899999999888776
Q ss_pred C----CCCCcEEEEcC---------------CchhhHHHHHHcCCcE
Q 023578 210 E----VQPNEVMMVGD---------------SLKDDVACGKRAGAFT 237 (280)
Q Consensus 210 g----i~~~~~v~iGD---------------s~~~Di~~a~~~G~~~ 237 (280)
+ +.-..+.|+|| |. .|+.-|.++|+.+
T Consensus 184 nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~-~D~~FAaN~gvkF 229 (422)
T KOG2134|consen 184 NDSVEISEKASIFVGDAAGRPLDALRRKKDHSS-ADRKFAANAGVKF 229 (422)
T ss_pred hccceeeechhhhhhhhccCccccccCcccccH-HHHHHHHhcCCcc
Confidence 4 34445568877 34 6899999999865
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00026 Score=56.19 Aligned_cols=87 Identities=11% Similarity=0.087 Sum_probs=58.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----cc--ceeeC---------CCC--CCCCChHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FS--PALSR---------EFR--PYKPDPGPLLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd--~v~~~---------~~~--~~Kp~~~~~~~~ 205 (280)
...|++.++|+.+.++ +.|+|-|.+...+++.++..+|+. +. .+... ..+ .-|+ +..+
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~l 119 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGVI 119 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHHh
Confidence 4689999999999996 999999999999999999988753 11 11111 011 1222 2223
Q ss_pred HHhcC--CCCCcEEEEcCCchhhHHHHHHcCC
Q 023578 206 CSTWE--VQPNEVMMVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 206 ~~~lg--i~~~~~v~iGDs~~~Di~~a~~~G~ 235 (280)
-+++| .+..++++|+|++ ....+=-.-|+
T Consensus 120 w~~l~~~~~~~ntiiVDd~p-~~~~~~P~N~i 150 (195)
T TIGR02245 120 WALLPEFYSMKNTIMFDDLR-RNFLMNPQNGL 150 (195)
T ss_pred hhhcccCCCcccEEEEeCCH-HHHhcCCCCcc
Confidence 33554 3778999999999 54443333344
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0023 Score=51.04 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=75.9
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----------cccee-------------------eCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----------FSPAL-------------------SRE 191 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----------fd~v~-------------------~~~ 191 (280)
..++.||+.+.++.|.+. +.-+++|.+...++++....+|++ +|.+- +++
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHH
Confidence 468999999999999987 666677777778888888888874 22110 000
Q ss_pred -----------------C---------CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcC-CcEEEEcCCC
Q 023578 192 -----------------F---------RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG-AFTCLLDETG 244 (280)
Q Consensus 192 -----------------~---------~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G-~~~i~v~~~~ 244 (280)
. .-+--+....+..++.-+++-. +++||||. +|++|.+.+. -....|..
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSI-tDv~ml~~~rgrGglAvaF-- 235 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSI-TDVKMLEAARGRGGLAVAF-- 235 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcc-cchHHHHHhhccCceEEEe--
Confidence 0 0011123344445555555433 89999999 9999998873 22233332
Q ss_pred CCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 245 RYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 245 ~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+|++-... .+....+..+...+..+|+-
T Consensus 236 -NGNeYal~-eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 236 -NGNEYALK-EADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred -cCCccccc-ccceEEeccchhhhhHHHHH
Confidence 23332221 24444555566666666653
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00019 Score=71.00 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=86.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---cc-----------------------ceeeCC-C---
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FS-----------------------PALSRE-F--- 192 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd-----------------------~v~~~~-~--- 192 (280)
++.|++.+.+++++++|++++++|+.....+..+.+.+|+. .+ .++++. .
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 56889999999999999999999999999999999999883 10 133321 1
Q ss_pred ---------------CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCC
Q 023578 193 ---------------RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQ 257 (280)
Q Consensus 193 ---------------~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 257 (280)
...+-.|+-...+.+.+.-...-+.++||+. ||+.|.++|.+..++-. .|.+-.+ ..
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~-ND~paLk~AdVGiamg~----~G~~vak---~a 719 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV-NDSPALKKADIGVAMGI----AGSDVSK---QA 719 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCc-ccHHHHhhCCcceecCC----cccHHHH---Hh
Confidence 1122334444445555544445688999999 99999999999876521 2232223 47
Q ss_pred CCEEEcC--HHHHHHHHH
Q 023578 258 PDFRVSS--LTEVLSILE 273 (280)
Q Consensus 258 ~d~v~~~--~~dl~~~l~ 273 (280)
+|+++.+ |..+...+.
T Consensus 720 ADivL~dd~f~~Iv~ai~ 737 (997)
T TIGR01106 720 ADMILLDDNFASIVTGVE 737 (997)
T ss_pred hceEEecCCHHHHHHHHH
Confidence 8998877 777777654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0076 Score=54.23 Aligned_cols=84 Identities=10% Similarity=0.040 Sum_probs=53.0
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHH-cCCcccceeeCCC-----C------CCCCChHH-HHHHHHhcCCCCCcEE
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNR-FGITFSPALSREF-----R------PYKPDPGP-LLHICSTWEVQPNEVM 217 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~g~~fd~v~~~~~-----~------~~Kp~~~~-~~~~~~~lgi~~~~~v 217 (280)
.++..+..| +++++|..++.+++..++. +|.+ .|++.|. + .++...+. ...+.+.+|- ....+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D--~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g~-~~~~v 176 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD--EVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFVD-ERPQL 176 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc--eEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhCc-cCcee
Confidence 556667788 9999999999999999988 8864 3333221 0 12222333 3444455663 24477
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
-+||+. .|-.-..-|. -+.+.
T Consensus 177 g~~~~~-~~~~f~~~ck--~~~~~ 197 (498)
T PLN02499 177 GLGRIS-ASSSFLSLCK--EQIHP 197 (498)
T ss_pred cccCCc-ccchhhhhCc--eEEec
Confidence 888888 7777666544 44443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00073 Score=63.97 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=80.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
.+.|++...++.||+.|++++.+|+.+...++.+.+..| ++.+++.-....| .+.++. +.-....+.||||+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG--i~~V~aev~P~~K--~~~Ik~----lq~~~~~VaMVGDG 794 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG--IDNVYAEVLPEQK--AEKIKE----IQKNGGPVAMVGDG 794 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC--cceEEeccCchhh--HHHHHH----HHhcCCcEEEEeCC
Confidence 568999999999999999999999999999999999999 4666553333222 234444 43344679999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||-.+...+.+..+... +.+-.- ..+|+++ +++.+++..++
T Consensus 795 I-NDaPALA~AdVGIaig~-----gs~vAi---eaADIVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 795 I-NDAPALAQADVGIAIGA-----GSDVAI---EAADIVLMRNDLRDVPFAID 838 (951)
T ss_pred C-CccHHHHhhccceeecc-----ccHHHH---hhCCEEEEccchhhhHHHHH
Confidence 9 99999988887655533 211111 2555544 56677666654
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00074 Score=66.28 Aligned_cols=124 Identities=15% Similarity=0.099 Sum_probs=87.9
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCccc----ceeeCCC-C----------------CCCCChH
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS----PALSREF-R----------------PYKPDPG 200 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd----~v~~~~~-~----------------~~Kp~~~ 200 (280)
-+|.|++.+.++.|+++|+++..+|+-....+..+.+..|+.-+ .+++|.. . ..+-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 37889999999999999999999999999999999999998722 2544421 1 2233455
Q ss_pred HHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 201 PLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 201 ~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
-..++.+.+.-.-.-+.|.||+. ||..|.++|.+...+.. .|.+..++ .+|++. +++.-+...+.
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGv-NDapALk~ADVGIamg~----~Gtdaak~---Aadivl~dd~~~~i~~av~ 692 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGV-NDAPALKAADVGIAMGG----EGTDAAKE---AADIVLLDDNFATIVLAVV 692 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCc-hhHHHHHhcCccEEecc----cHHHHHHh---hcceEeecCcHHHHHHHHH
Confidence 55566666655556688999999 99999999999876653 33333332 455544 34454554443
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0023 Score=63.92 Aligned_cols=121 Identities=19% Similarity=0.189 Sum_probs=82.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-cc-ceeeCCC----------------------------
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FS-PALSREF---------------------------- 192 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd-~v~~~~~---------------------------- 192 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+- -+ .++..+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 57899999999999999999999999999999999999984 11 1111000
Q ss_pred ---------------------------------------------CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhH
Q 023578 193 ---------------------------------------------RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDV 227 (280)
Q Consensus 193 ---------------------------------------------~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di 227 (280)
..+.-.|+-...+.+.+.-...-+.|.||+. ||+
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~-ND~ 814 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGA-NDC 814 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCCh-HHH
Confidence 0011123333444444444445689999999 999
Q ss_pred HHHHHcCCcEEEEcCCCCCCccccccCCCCCCEE--EcCHHHHHHHHHh
Q 023578 228 ACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFR--VSSLTEVLSILEA 274 (280)
Q Consensus 228 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v--~~~~~dl~~~l~~ 274 (280)
.+.++|.+..++-. + +.. ..+|++ .+++..+...|.+
T Consensus 815 ~ALK~AdVGIam~~-----~--das---~AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 815 GALKQADVGISLSE-----A--EAS---VAAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred HHHHhcCcceeecc-----c--cce---eecccccCCCcHHHHHHHHHH
Confidence 99999998776632 1 111 256666 4577777777653
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0009 Score=58.60 Aligned_cols=96 Identities=23% Similarity=0.205 Sum_probs=81.6
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeC--CchHHHHHHHHHcCCcccc--e-eeCCCCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITR--NIKEAVDLFHNRFGITFSP--A-LSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~--~~~~~~~~~l~~~g~~fd~--v-~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
.....++.+.+.++|.+|+++|+ -+....+.++...|.++.. + .+++....|.....|..+++.-+++|.+.+++
T Consensus 101 n~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~ 180 (635)
T COG5610 101 NKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIHC 180 (635)
T ss_pred cccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheEEe
Confidence 33467899999999999999998 5667788899999988433 3 34677788889999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEE
Q 023578 220 GDSLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v 240 (280)
||+.-.|..++++.|+.|...
T Consensus 181 GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 181 GDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred cCchhhhhcCccccchhHHHH
Confidence 999978999999999987653
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0027 Score=53.22 Aligned_cols=84 Identities=14% Similarity=0.172 Sum_probs=56.7
Q ss_pred ccCcCHHHHHHHhhhC----CCeEEEEeCCc----hHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCC
Q 023578 143 QIMPGTAQLCGFLDSK----KIRRGLITRNI----KEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~----g~~i~ivS~~~----~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
.+.||+.+.++.|.++ .++.+++||+. +..++.+-+.+|++ -|.++-+.. .|+... . ..
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHs--------P~r~l~-~--~~ 119 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHS--------PFRLLV-E--YH 119 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcC--------hHHHHh-h--hh
Confidence 5889999999999988 79999999953 23345566777776 232322211 233333 1 23
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
.++++++|+.. -.+.|+..|+.-|.
T Consensus 120 ~k~vLv~G~~~--vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 120 YKRVLVVGQGS--VREVAEGYGFKNVV 144 (389)
T ss_pred hceEEEecCCc--HHHHhhccCcccee
Confidence 56799999665 67788889987553
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00086 Score=67.06 Aligned_cols=122 Identities=11% Similarity=0.126 Sum_probs=79.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-cc------------------------------------
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FS------------------------------------ 185 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd------------------------------------ 185 (280)
++.||+.+.++.|++.|++++++||.....+..+....|+- -+
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 67899999999999999999999998777777776666653 11
Q ss_pred ------ceeeCCC-----------------------CCCCCChHHHHHHHHhcCCC-CCcEEEEcCCchhhHHHHHHcCC
Q 023578 186 ------PALSREF-----------------------RPYKPDPGPLLHICSTWEVQ-PNEVMMVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 186 ------~v~~~~~-----------------------~~~Kp~~~~~~~~~~~lgi~-~~~~v~iGDs~~~Di~~a~~~G~ 235 (280)
.+++++. ...+-.|.-...+.+.+.-. ..-+.++||+. ||+.|.++|.+
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~-ND~~mlk~AdV 789 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGA-NDVSMIQEADV 789 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCC-ccHHHHhhcCe
Confidence 0222210 01111122222222223222 45689999999 99999999988
Q ss_pred cEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 236 FTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 236 ~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
.. ++.. ..+. .. ...+|+++.++..|..+|
T Consensus 790 GI-gi~g--~eg~-qA---~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 790 GV-GISG--KEGM-QA---VMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred ee-EecC--hHHH-HH---HHhhhhhhhhHHHHHHHH
Confidence 65 5542 1111 12 237999999999888876
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0016 Score=61.32 Aligned_cols=124 Identities=21% Similarity=0.255 Sum_probs=90.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-c-c----ceeeCC-CC----------------CCCCCh
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-F-S----PALSRE-FR----------------PYKPDP 199 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-f-d----~v~~~~-~~----------------~~Kp~~ 199 (280)
+|.|++.+.++.+++.|+++..+|+.+...++.+.++.|+. . + ..+++. .. ...-.|
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 67899999999999999999999999999999999999986 1 2 123321 10 223345
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHHh
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILEA 274 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~~ 274 (280)
.-..++.+.|.-..+=+.|-||+. ||-.+.+.|.+..++- ..|.+-.++ .+|.|+. +|.-+...+++
T Consensus 664 ~HK~kIVeaLq~~geivAMTGDGV-NDApALK~AdIGIAMG----~~GTdVaKe---AsDMVL~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 664 QHKLKIVEALQSRGEVVAMTGDGV-NDAPALKKADIGIAMG----ISGTDVAKE---ASDMVLADDNFSTIVAAVEE 732 (972)
T ss_pred hhHHHHHHHHHhcCCEEEecCCCc-cchhhhhhcccceeec----CCccHhhHh---hhhcEEecCcHHHHHHHHHH
Confidence 666677777766666788999999 9999999999988773 244443443 6676664 56655555543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0019 Score=51.38 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=31.3
Q ss_pred HHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 148 TAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 148 ~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
+.+.+.+|++.|++|+.+|+....-+....+.+|+.
T Consensus 28 A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 28 AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 456889999999999999999888888888888876
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0095 Score=50.42 Aligned_cols=88 Identities=18% Similarity=0.135 Sum_probs=60.1
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch---HHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK---EAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.-.++||+.++|++|+++|++++++||+.. ......++.+|+. .+.++++ .......+++.+.....
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts--------~~~~~~~l~~~~~~~~~ 87 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS--------ALCAARLLRQPPDAPKA 87 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH--------HHHHHHHHHhhCcCCCE
Confidence 345899999999999999999999999653 3333566778876 3334432 12334455554444567
Q ss_pred EEEEcCCchhhHHHHHHcCCcEE
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTC 238 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i 238 (280)
++++|+.. ..+.++..|+..+
T Consensus 88 v~~iG~~~--~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEEG--LRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCHH--HHHHHHHCCCEEe
Confidence 99999865 4566778888654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0052 Score=56.52 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=76.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
.+.|++.+.++.|++.|++++++|+........+.+.+|+. + .-.|+-...+.+++.-....+.++||+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~-----~------~~~p~~K~~~v~~l~~~g~~v~~vGDg 415 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIF-----A------RVTPEEKAALVEALQKKGRVVAMTGDG 415 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCce-----e------ccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 67899999999999999999999999999999999999861 1 122344444555443334679999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSIL 272 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~l 272 (280)
. ||..+.+.+++..++. . ...+|+++.+ +..+..++
T Consensus 416 ~-nD~~al~~Advgia~~----------a---~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 416 V-NDAPALKKADVGIAMG----------A---KAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred h-hhHHHHHhCCCccccc----------h---HHhCCeEEecCCHHHHHHHH
Confidence 9 9999999998764431 1 2357777764 44444444
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0026 Score=53.91 Aligned_cols=98 Identities=21% Similarity=0.121 Sum_probs=69.6
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc-CCc----ccceee-CCCC-----CCCC----C----------
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF-GIT----FSPALS-REFR-----PYKP----D---------- 198 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~-g~~----fd~v~~-~~~~-----~~Kp----~---------- 198 (280)
-.|....+++.|+++|.++.++||++..++..-..-+ |-+ ||.|+. .+-. ..+| +
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 3567888999999999999999999998887554332 333 787654 2100 1111 0
Q ss_pred -----------hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEc
Q 023578 199 -----------PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK-RAGAFTCLLD 241 (280)
Q Consensus 199 -----------~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~-~~G~~~i~v~ 241 (280)
...+...++--|+...+++++||..-+|+.... +.||+|..+-
T Consensus 321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 112345666678888899999999988999888 8999886654
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0053 Score=61.72 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=39.8
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.-++++||+. ||+.|.++|.+.. ++.. .-|.+ . .-.+||.+..|..|..+|-
T Consensus 872 ~vtlaIGDGa-NDv~mIq~AdVGI-GIsG--~EG~q-A---~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGA-NDVSMIQMADVGV-GISG--QEGRQ-A---VMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCc-chHHHHHhcCeee-eecC--chhHH-H---HHhhccchhhhHHHHHHHH
Confidence 4589999999 9999999998764 6542 22222 2 2389999999999998874
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.044 Score=45.51 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=61.4
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHH---HHHHHHcCCc--ccceeeCC-C-----CC--CC----CChHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAV---DLFHNRFGIT--FSPALSRE-F-----RP--YK----PDPGPLLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~---~~~l~~~g~~--fd~v~~~~-~-----~~--~K----p~~~~~~~~ 205 (280)
.+.||+.++++.|+++|.+++++||+..... ...++.+|++ .+.++++. . .. .+ --...+...
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~ 96 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE 96 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence 6899999999999999999999999776443 3445667876 45566541 0 00 00 111345555
Q ss_pred HHhcCCC----CCcEEEEcCCchhhHHHHH------HcCCcEEEEc
Q 023578 206 CSTWEVQ----PNEVMMVGDSLKDDVACGK------RAGAFTCLLD 241 (280)
Q Consensus 206 ~~~lgi~----~~~~v~iGDs~~~Di~~a~------~~G~~~i~v~ 241 (280)
++..|+. ..+.|++|.....+..... +.|...+..+
T Consensus 97 l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n 142 (248)
T PRK10444 97 LYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN 142 (248)
T ss_pred HHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence 5665643 3357788876623433322 2377777655
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.032 Score=41.16 Aligned_cols=105 Identities=17% Similarity=0.202 Sum_probs=63.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCC--chHH----HHHHHHHcCCc-cc-ceeeCCCCCCCCChHHHHHHHHhcCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRN--IKEA----VDLFHNRFGIT-FS-PALSREFRPYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~--~~~~----~~~~l~~~g~~-fd-~v~~~~~~~~Kp~~~~~~~~~~~lgi 211 (280)
.++.+.|++.++++.|-+. +.++|+|.. .... .+.+.+.+..- .. .++|+.-+.-|-
T Consensus 65 RnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnKnivka-------------- 129 (180)
T COG4502 65 RNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNKNIVKA-------------- 129 (180)
T ss_pred hhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCCCeEEe--------------
Confidence 5677899999999999988 999999975 2222 23333444432 22 245554332221
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH-HHHhc
Q 023578 212 QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS-ILEAN 275 (280)
Q Consensus 212 ~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~-~l~~~ 275 (280)
=++|+|++ .+++..+ |+ -|++.-.++....... .+.++.|+.+ +++.+
T Consensus 130 ----DilIDDnp-~nLE~F~--G~-kIlFdA~HN~nenRF~--------Rv~~W~e~eq~ll~~~ 178 (180)
T COG4502 130 ----DILIDDNP-LNLENFK--GN-KILFDAHHNKNENRFV--------RVRDWYEAEQALLESL 178 (180)
T ss_pred ----eEEecCCc-hhhhhcc--Cc-eEEEecccccCcccee--------eeccHHHHHHHHHHhh
Confidence 26899999 8888765 43 3444433333332333 3789999884 44444
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.085 Score=43.40 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=46.8
Q ss_pred CCeEEEEeCCchHHHH---HHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCC
Q 023578 159 KIRRGLITRNIKEAVD---LFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 159 g~~i~ivS~~~~~~~~---~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~ 235 (280)
-+++++||..+...-+ ..++.+|+.+|..+. -.+-+|. .+++.++-. +|++|+. ..++.|. .++
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~vDEafF---LgG~~K~----~vL~~~~ph----IFFDDQ~-~H~~~a~-~~v 252 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVRVDEAFF---LGGLPKG----PVLKAFRPH----IFFDDQD-GHLESAS-KVV 252 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHH---hCCCchh----HHHHhhCCC----EeecCch-hhhhHhh-cCC
Confidence 4789999986554444 455778888665322 1112222 455555533 8999999 9999997 888
Q ss_pred cEEEEc
Q 023578 236 FTCLLD 241 (280)
Q Consensus 236 ~~i~v~ 241 (280)
.++.|.
T Consensus 253 ps~hVP 258 (264)
T PF06189_consen 253 PSGHVP 258 (264)
T ss_pred CEEecc
Confidence 888886
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.02 Score=52.56 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=58.8
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCC---chHHHHHHHHHcCCc----ccc--eeeC---------CCCCCCCC---hHHHH
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRN---IKEAVDLFHNRFGIT----FSP--ALSR---------EFRPYKPD---PGPLL 203 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~---~~~~~~~~l~~~g~~----fd~--v~~~---------~~~~~Kp~---~~~~~ 203 (280)
.-|+.++...++++||++..+|.. .....+..|..+.-+ .++ +++- |+-.+||. .+.+.
T Consensus 560 h~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~ 639 (738)
T KOG2116|consen 560 HTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLT 639 (738)
T ss_pred hhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHH
Confidence 468999999999999999999983 334455566554433 232 2221 33355663 23333
Q ss_pred HHHHhcCCCCCc-EEEEcCCchhhHHHHHHcCCcE
Q 023578 204 HICSTWEVQPNE-VMMVGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 204 ~~~~~lgi~~~~-~v~iGDs~~~Di~~a~~~G~~~ 237 (280)
.+.+-+.-+.+- ...||+.. +|+-.=+++|+.-
T Consensus 640 DIk~LF~p~~nPFYAgFGNR~-TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 640 DIKNLFPPSGNPFYAGFGNRI-TDVISYRQVGVPL 673 (738)
T ss_pred HHHHhcCCCCCceeeecCCCc-ccceeeeeecCCc
Confidence 444445422222 45799999 9999999999853
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.033 Score=50.04 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=71.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
...||+.|-+.+||+.|++.+-+|+.+.-....+.+..|++ .++. .-+|+-...+.++.+-...=+.|.||+
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiA------eatPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIA------EATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhh------cCChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 34799999999999999999999999988888888999986 2211 223455566667666666678899999
Q ss_pred chhhHHHHHHcCCcEEEE
Q 023578 223 LKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v 240 (280)
- ||..+..++....++-
T Consensus 519 T-NDAPALAqAdVg~AMN 535 (681)
T COG2216 519 T-NDAPALAQADVGVAMN 535 (681)
T ss_pred C-Ccchhhhhcchhhhhc
Confidence 9 9999999998877763
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.057 Score=42.42 Aligned_cols=43 Identities=16% Similarity=0.253 Sum_probs=30.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----ccceee
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSPALS 189 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~v~~ 189 (280)
...|.+.+.|+.||.. ..+++|-++.- ....+.+|-. ||.+++
T Consensus 28 ~~~~e~~~~l~~lr~~-v~ig~VggsDl---~k~~eqlG~~Vl~~fDY~F~ 74 (252)
T KOG3189|consen 28 KVTPEMLEFLQKLRKK-VTIGFVGGSDL---SKQQEQLGDNVLEEFDYVFS 74 (252)
T ss_pred cCCHHHHHHHHHHhhh-eEEEEeecHHH---HHHHHHhchhHHhhhccccc
Confidence 4678888999999887 78888877543 3344555644 676665
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.038 Score=46.09 Aligned_cols=42 Identities=14% Similarity=0.003 Sum_probs=33.0
Q ss_pred CcccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCC
Q 023578 141 RLQIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGI 182 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~ 182 (280)
...+.+++.++|+.|..+ ...++|+|+......+.++.-.|+
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 456888999999999988 345999999988888777764444
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.37 Score=40.92 Aligned_cols=84 Identities=14% Similarity=0.154 Sum_probs=53.9
Q ss_pred CcccCcCHHHHHHHhhhCC-CeEEEEeCCchHHHHHHHHHc---CCc------------ccceeeCCCCCCCCChHHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKK-IRRGLITRNIKEAVDLFHNRF---GIT------------FSPALSREFRPYKPDPGPLLH 204 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g-~~i~ivS~~~~~~~~~~l~~~---g~~------------fd~v~~~~~~~~Kp~~~~~~~ 204 (280)
...++||+-.+.+.|.+.| .++..+||+.-.....+.+-+ ++. ++.++.+ ....| ...+..
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~s-ga~rK--~~~l~n 270 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIES-GAARK--GQSLRN 270 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccc-hhhhc--ccHHHH
Confidence 4578999999999998887 899999997655433332222 222 2222211 11122 245555
Q ss_pred HHHhcCCCCCcEEEEcCCchhhHHH
Q 023578 205 ICSTWEVQPNEVMMVGDSLKDDVAC 229 (280)
Q Consensus 205 ~~~~lgi~~~~~v~iGDs~~~Di~~ 229 (280)
++.+++ ....+.|||+-+.|.+.
T Consensus 271 il~~~p--~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 271 ILRRYP--DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHhCC--CceEEEecCCCCcCHHH
Confidence 677663 45789999999889865
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.027 Score=47.05 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=38.0
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchH---HHHHHHHHcCCc--ccceeeC
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKE---AVDLFHNRFGIT--FSPALSR 190 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~---~~~~~l~~~g~~--fd~v~~~ 190 (280)
+.|++.+++++|+++|++++++||++.. .+...++.+|++ .+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 8899999999999999999999996555 356667888887 4556653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.034 Score=45.65 Aligned_cols=91 Identities=15% Similarity=0.252 Sum_probs=54.9
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccc--eeeC-----CCC------------CCCCChH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSP--ALSR-----EFR------------PYKPDPG 200 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~--v~~~-----~~~------------~~Kp~~~ 200 (280)
....+.+|+.++++.|.++++++.|.|.|-.+.++.+++..|..++- |++. +.+ ..|.. .
T Consensus 87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~-~ 165 (246)
T PF05822_consen 87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNE-S 165 (246)
T ss_dssp S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHH-H
T ss_pred cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCc-c
Confidence 45678999999999999999999999999999999999888765221 2221 111 11111 1
Q ss_pred HHH--HHHHhcCCCCCcEEEEcCCchhhHHHHHHc
Q 023578 201 PLL--HICSTWEVQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 201 ~~~--~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
.+. ...+++. ...+++..||+. .|+.|+..+
T Consensus 166 ~l~~~~~~~~~~-~R~NvlLlGDsl-gD~~Ma~G~ 198 (246)
T PF05822_consen 166 ALEDSPYFKQLK-KRTNVLLLGDSL-GDLHMADGV 198 (246)
T ss_dssp HHTTHHHHHCTT-T--EEEEEESSS-GGGGTTTT-
T ss_pred cccCchHHHHhc-cCCcEEEecCcc-CChHhhcCC
Confidence 110 1112221 356799999999 999998766
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.18 Score=41.05 Aligned_cols=79 Identities=10% Similarity=0.045 Sum_probs=54.4
Q ss_pred CeEEEEeCCchHHH-HHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 023578 160 IRRGLITRNIKEAV-DLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 160 ~~i~ivS~~~~~~~-~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~ 236 (280)
+.+.|.|+.-.+.. +.++-.+|-- ++-|+++. +.+| ...|+.+.+++|-+...-++|||+. ..-.+|+..+|+
T Consensus 177 vNvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~-kvGK--~~cFe~I~~Rfg~p~~~f~~IGDG~-eEe~aAk~l~wP 252 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSI-KVGK--LQCFKWIKERFGHPKVRFCAIGDGW-EECTAAQAMNWP 252 (274)
T ss_pred eEEEEEcCccHHHHHHHHHhccCCccccccccchh-hcch--HHHHHHHHHHhCCCCceEEEeCCCh-hHHHHHHhcCCC
Confidence 34444444443333 3333444332 44566542 2334 5899999999998788999999999 999999999999
Q ss_pred EEEEcC
Q 023578 237 TCLLDE 242 (280)
Q Consensus 237 ~i~v~~ 242 (280)
++-++.
T Consensus 253 Fw~I~~ 258 (274)
T TIGR01658 253 FVKIDL 258 (274)
T ss_pred eEEeec
Confidence 999874
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.3 Score=35.45 Aligned_cols=86 Identities=8% Similarity=-0.005 Sum_probs=59.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch-HHHHHHHHHcCCcccceee-------CCCCCCCCChHHHHHHHHhcCCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK-EAVDLFHNRFGITFSPALS-------REFRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~-~~~~~~l~~~g~~fd~v~~-------~~~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
....++++...|..|+++|+.++++|++.. +.+.+.|+.+.+..++++. ......-.+...|..+-+..|+.
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~ 121 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSI 121 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcc
Confidence 456789999999999999999999998654 4567788888776333321 11111122345566777777887
Q ss_pred CCcEEEEcCCchhhH
Q 023578 213 PNEVMMVGDSLKDDV 227 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di 227 (280)
..+..+++|.. .+-
T Consensus 122 ~k~~~~fdDes-rnk 135 (144)
T KOG4549|consen 122 EKNKQVFDDES-RNK 135 (144)
T ss_pred hhceeeecccc-cCC
Confidence 88888888877 543
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.14 Score=45.01 Aligned_cols=89 Identities=15% Similarity=0.101 Sum_probs=50.2
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchH---HHHH---HHHHcCCc-cc--------ceeeC---CCCCCCCChHHHHHH-
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKE---AVDL---FHNRFGIT-FS--------PALSR---EFRPYKPDPGPLLHI- 205 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~---~~~~---~l~~~g~~-fd--------~v~~~---~~~~~Kp~~~~~~~~- 205 (280)
..|+..+...+.++||+|.-+|+...- ..+. ..+.-|.. .+ ..+++ +.-..|| +.|+.+
T Consensus 405 h~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkp--E~FKiay 482 (580)
T COG5083 405 HNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKP--EVFKIAY 482 (580)
T ss_pred hcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcCh--HHHHHHH
Confidence 356677777788899999999973221 1122 22333433 22 22221 2223455 443322
Q ss_pred ---HHhcCCCCCcE-EEEcCCchhhHHHHHHcCCc
Q 023578 206 ---CSTWEVQPNEV-MMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 206 ---~~~lgi~~~~~-v~iGDs~~~Di~~a~~~G~~ 236 (280)
++.+++.++-. .-+|+.. .|+.+=+++|+.
T Consensus 483 Lndl~slf~e~~PFyAGFGNri-TDvisY~~vgIp 516 (580)
T COG5083 483 LNDLKSLFIEFDPFYAGFGNRI-TDVISYSNVGIP 516 (580)
T ss_pred HHHHHHhhCcCChhhccccccc-hhheeeccccCC
Confidence 23334443333 3689999 999999999985
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.67 Score=38.12 Aligned_cols=50 Identities=18% Similarity=0.185 Sum_probs=36.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCc---hHHHHHHHHH-cCCc--ccceeeC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNI---KEAVDLFHNR-FGIT--FSPALSR 190 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~---~~~~~~~l~~-~g~~--fd~v~~~ 190 (280)
...++|++.+.++.++++|+++.++||+. .......+.. +|++ .+.++++
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 44678999999999999999999999755 2233334444 7776 5666653
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.07 Score=44.28 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=36.6
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcC----CchhhHHHHHHcCCcEEEEc
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGD----SLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGD----s~~~Di~~a~~~G~~~i~v~ 241 (280)
.+-.|..+++.++++ ++++++||| +. ||++|.+.+|...+.|.
T Consensus 185 ~gvsKg~al~~L~~~----~~eviafGD~~~~~~-NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 185 KGWDKTYCLRHLEND----FKEIHFFGDKTFEGG-NDYEIYNDPRTIGHSVK 231 (247)
T ss_pred CCCcHHHHHHHHHhh----hhhEEEEcccCCCCC-CcHhhhhcCCCceEEeC
Confidence 456677899999998 589999999 88 99999998888777765
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.13 Score=49.96 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=33.3
Q ss_pred cccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCC
Q 023578 142 LQIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGI 182 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~ 182 (280)
..+.|++.++|+.|.+. +..++|+|+.....++.++...++
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l 572 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNI 572 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCC
Confidence 45778899999999875 678999999999988888865443
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.14 Score=50.32 Aligned_cols=41 Identities=17% Similarity=0.189 Sum_probs=33.5
Q ss_pred cccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCC
Q 023578 142 LQIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGI 182 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~ 182 (280)
..+.|++.++|+.|.+. +..|+|+|+.....++.++...++
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 35778899999999875 678999999999988888866544
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.55 Score=45.05 Aligned_cols=121 Identities=16% Similarity=0.171 Sum_probs=76.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccc-eee--C-CCC----------------CCCCChHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSP-ALS--R-EFR----------------PYKPDPGP 201 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~-v~~--~-~~~----------------~~Kp~~~~ 201 (280)
+..||+.+.++.++..|+.+--+|+.+...++.+...-|+- -+. ..+ + +.. -+...|.-
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~D 726 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPND 726 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCch
Confidence 45799999999999999999999999999999999888876 211 111 1 111 01112222
Q ss_pred HHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHH
Q 023578 202 LLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSI 271 (280)
Q Consensus 202 ~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~ 271 (280)
-..+.+-+.-..+-+.+-||+- ||-.+.++|.+..++- ..|.+-.+ ...|+++- +|..+...
T Consensus 727 K~lLVk~L~~~g~VVAVTGDGT-NDaPALkeADVGlAMG----IaGTeVAK---EaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 727 KHLLVKGLIKQGEVVAVTGDGT-NDAPALKEADVGLAMG----IAGTEVAK---EASDIIILDDNFSSIVKA 790 (1034)
T ss_pred HHHHHHHHHhcCcEEEEecCCC-CCchhhhhcccchhcc----ccchhhhh---hhCCeEEEcCchHHHHHH
Confidence 2222222221223355679999 9999999999887762 23333333 37777764 45554444
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.62 Score=40.30 Aligned_cols=87 Identities=13% Similarity=0.195 Sum_probs=60.5
Q ss_pred CCcccCcCHHHHHHHhhhC----CCeEEEEeCCc---hH-HHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhc
Q 023578 140 DRLQIMPGTAQLCGFLDSK----KIRRGLITRNI---KE-AVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~----g~~i~ivS~~~---~~-~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~l 209 (280)
....+.|++.++++.|+.+ |+++.++||+. .. ..+.+.+++|++ .+.++++. ......++++
T Consensus 13 ~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~--------~~~~~ll~~~ 84 (321)
T TIGR01456 13 RGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH--------SPYKSLVNKY 84 (321)
T ss_pred CCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh--------HHHHHHHHHc
Confidence 3446799999999999998 99999999975 33 344455888987 34454432 1334445555
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
+ ..++++|.+. -.+.++.+|+..+.
T Consensus 85 ~---~~v~viG~~~--~~~~l~~~G~~~vv 109 (321)
T TIGR01456 85 E---KRILAVGTGS--VRGVAEGYGFQNVV 109 (321)
T ss_pred C---CceEEEeChH--HHHHHHHcCCcccc
Confidence 3 2688999765 47778899987653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.17 Score=41.62 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=25.3
Q ss_pred ChHHHHHHHHhcCCC---CCcEEEEcCCchhhHHHHHHcCCc
Q 023578 198 DPGPLLHICSTWEVQ---PNEVMMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~---~~~~v~iGDs~~~Di~~a~~~G~~ 236 (280)
|....+.++++++.. +.-++|+||+. +|-.+.+.+.-.
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD~-tDE~~f~~~~~~ 206 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDDR-TDEDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESSH-HHHHHHHTTTTS
T ss_pred hHHHHHHHHHhcCccccccceeEEecCCC-CCHHHHHHHHhc
Confidence 344667777777765 67899999999 999999887553
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.16 E-value=1.3 Score=37.61 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=35.8
Q ss_pred CCCChHHHHHHHHhcCCC--CCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 195 YKPDPGPLLHICSTWEVQ--PNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~--~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
..+|....+.+.+.++-. +-.++.+|||+ ||+.|.+.+...++.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDsp-ND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSP-PDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCCh-hhHHHHHhCCeeEEe
Confidence 456778888888877643 45899999999 999999999987665
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.13 E-value=1.3 Score=37.31 Aligned_cols=92 Identities=13% Similarity=0.065 Sum_probs=58.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHH---HHcCCc-c--cceeeCCCCCCCCChHHHHHHHHhcCCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH---NRFGIT-F--SPALSREFRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l---~~~g~~-f--d~v~~~~~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
..-.+.||+.+.++.|+..|-++.++||++...-+... +++|+. + +.+++ |.-.. -..+++..-..
T Consensus 35 ~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~s-------sa~~~-a~ylk~~~~~~ 106 (306)
T KOG2882|consen 35 LGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFS-------SAYAI-ADYLKKRKPFG 106 (306)
T ss_pred ecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccC-------hHHHH-HHHHHHhCcCC
Confidence 35578999999999999999999999997766555444 456654 2 22322 21122 22333333345
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~ 241 (280)
+.+.++|-.. =-+..+++|+......
T Consensus 107 k~Vyvig~~g--i~~eL~~aG~~~~g~~ 132 (306)
T KOG2882|consen 107 KKVYVIGEEG--IREELDEAGFEYFGGG 132 (306)
T ss_pred CeEEEecchh--hhHHHHHcCceeecCC
Confidence 6777777665 3456778887666544
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.60 E-value=2.3 Score=42.84 Aligned_cols=29 Identities=14% Similarity=0.132 Sum_probs=25.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNI 169 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~ 169 (280)
+-++.+|+.|.++.|++.|+|++++|+--
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK 677 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTGDK 677 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcCcH
Confidence 34678999999999999999999999843
|
|
| >KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription] | Back alignment and domain information |
|---|
Probab=90.78 E-value=0.025 Score=46.88 Aligned_cols=92 Identities=15% Similarity=0.112 Sum_probs=62.4
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
+.-.|++.++|....+. +.+++.|++...+...++..+.-. +...+-.+....++ ..|-+-+..+|-+..+++.
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~--g~yvKdls~~~~dL~~viI 206 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKD--GNYVKDLSVLGRDLSKVII 206 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeEC--CcEEEEcceeccCcccEEE
Confidence 45689999999999988 899999999999999999888752 22222111110000 0111122556778889999
Q ss_pred EcCCchhhHHHHHHcCCcE
Q 023578 219 VGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~ 237 (280)
|+|++ .-..+=-.-|+..
T Consensus 207 iDNsP-~sy~~~p~NgIpI 224 (262)
T KOG1605|consen 207 VDNSP-QSYRLQPENGIPI 224 (262)
T ss_pred EcCCh-HHhccCccCCCcc
Confidence 99999 7777666667654
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.68 E-value=0.97 Score=42.53 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=69.4
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
..++..-|..||.++...-++++.+-.+.-...+.--++ ...++++.+.. .-|+.+.+.+.++-| ..+.+||
T Consensus 713 r~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctP-tQKA~v~~llq~~t~---krvc~IG 788 (1051)
T KOG0210|consen 713 RGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTP-TQKAQVVRLLQKKTG---KRVCAIG 788 (1051)
T ss_pred chHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecCh-hHHHHHHHHHHHhhC---ceEEEEc
Confidence 467788889999887666666664433322222211111 34556554321 223455555555555 5788999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|+. ||+.|..+|... |++.. ..|.+. .-.||+-+.-|..+..+|
T Consensus 789 DGG-NDVsMIq~A~~G-iGI~g--kEGkQA----SLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 789 DGG-NDVSMIQAADVG-IGIVG--KEGKQA----SLAADFSITQFSHVSRLL 832 (1051)
T ss_pred CCC-ccchheeecccc-eeeec--cccccc----chhccccHHHHHHHHHHh
Confidence 999 999998887653 44431 233322 237888888777776665
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.47 Score=39.95 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=36.8
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
...++..++|+.|+++|++++++||.....+...++.+|+.
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 35577889999999999999999999999999999999975
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.56 Score=37.99 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=34.8
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+...++|+.|+++|++++++||+....++..++.+++.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 334789999999999999999999999999999999864
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=89.78 E-value=0.9 Score=37.78 Aligned_cols=39 Identities=13% Similarity=0.108 Sum_probs=35.0
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+...++++.|+++|++++++|++....+...++.+|+.
T Consensus 18 ~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 18 WGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 345789999999999999999999999999999999974
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.62 Score=37.88 Aligned_cols=41 Identities=12% Similarity=-0.021 Sum_probs=36.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+.|...+.|++|+++|++++++|+++...+....+.+++.
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 35678889999999999999999999999888888888875
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.88 E-value=0.82 Score=38.21 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=36.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+.|...+.|++++++|++++++|++....+...++.+++.
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 46677889999999999999999999999888899999875
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=88.44 E-value=1.1 Score=37.70 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=35.6
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
..+...+.|++|+++|++++++|++....+...++.+|++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 4466788999999999999999999999999999999874
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.37 E-value=1.1 Score=36.91 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=60.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc-CCc-ccceeeC-----CCC----CCCC-------ChHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF-GIT-FSPALSR-----EFR----PYKP-------DPGPL 202 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~-g~~-fd~v~~~-----~~~----~~Kp-------~~~~~ 202 (280)
...+.+|..++...|+.+++++.|.|.+.-..++.+++.. +.. +..++|. +.+ ..+| ....+
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~ 215 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL 215 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence 4467789999999999999999999999999888877543 332 2222220 111 1111 11223
Q ss_pred HHHHHhcC--CCCCcEEEEcCCchhhHHHHHHc
Q 023578 203 LHICSTWE--VQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 203 ~~~~~~lg--i~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
+...+.+. -....+++.||+. .|+.||..+
T Consensus 216 ~~~s~yf~~~~~~~nVillGdsi-gdl~ma~gv 247 (298)
T KOG3128|consen 216 QNESEYFHQLAGRVNVILLGDSI-GDLHMADGV 247 (298)
T ss_pred HhhhHHHhhccCCceEEEecccc-ccchhhcCC
Confidence 33344443 2466899999999 999998754
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=87.89 E-value=1 Score=36.47 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=36.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+.+...+.|++++++|++++++|++....+..+++.+|..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 35677788999999999999999999999888888999864
|
catalyze the same reaction as SPP. |
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.89 E-value=2.5 Score=36.79 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=51.4
Q ss_pred eEEEEeCCchHHH-HHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 023578 161 RRGLITRNIKEAV-DLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 161 ~i~ivS~~~~~~~-~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~ 237 (280)
.|.|-|....... +.++-.+|-. ++-|++.. +.+ |...|+++.+++|- ...-++|||+. ..-.+|++..|.+
T Consensus 373 nVlvTttqLipalaKvLL~gLg~~fpiENIYSa~-kiG--KescFerI~~RFg~-K~~yvvIgdG~-eee~aAK~ln~Pf 447 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIYSAT-KIG--KESCFERIQSRFGR-KVVYVVIGDGV-EEEQAAKALNMPF 447 (468)
T ss_pred EEEEeccchhHHHHHHHHHhcCCcccchhhhhhh-hcc--HHHHHHHHHHHhCC-ceEEEEecCcH-HHHHHHHhhCCce
Confidence 3444444433333 3333444433 45566542 222 34799999999997 56778999999 8999999999999
Q ss_pred EEEcC
Q 023578 238 CLLDE 242 (280)
Q Consensus 238 i~v~~ 242 (280)
+-++.
T Consensus 448 wrI~~ 452 (468)
T KOG3107|consen 448 WRISS 452 (468)
T ss_pred Eeecc
Confidence 98873
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.13 E-value=1 Score=43.23 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=59.5
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc------cc-----------ceeeCC------CCCCCC--
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT------FS-----------PALSRE------FRPYKP-- 197 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~------fd-----------~v~~~~------~~~~Kp-- 197 (280)
+|...+.+.+..+|..|++++.+|+......+.+.+..|+- ++ .+.+.+ .+..+|
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 45678889999999999999999997666666666655532 11 111110 001111
Q ss_pred ChHHHHHHHHhcC------CCCC--------------cEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 198 DPGPLLHICSTWE------VQPN--------------EVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 198 ~~~~~~~~~~~lg------i~~~--------------~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
.++-+++++.... -+|+ =+.+.||+. ||-.+.+++.+.+++
T Consensus 670 ~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGV-NDsPALKKADIGVAM 730 (1019)
T KOG0203|consen 670 SSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV-NDSPALKKADIGVAM 730 (1019)
T ss_pred CHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCc-CCChhhcccccceee
Confidence 1233334433322 0111 245789999 999999999998888
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=83.86 E-value=2.9 Score=36.60 Aligned_cols=16 Identities=44% Similarity=0.341 Sum_probs=14.2
Q ss_pred CccEEEEeCCCcccCC
Q 023578 67 RLRGVVFDMDGTLTVP 82 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~ 82 (280)
..|.|.||=|+||++-
T Consensus 146 ~L~LvTFDgDvTLY~D 161 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYED 161 (408)
T ss_pred CceEEEEcCCcccccC
Confidence 6899999999999953
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.79 E-value=3.8 Score=39.58 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=34.9
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
..++.|+..+.++.|.+.+++++.+|+.+.-.+-.+.+.+|+-
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 3467899999999999999999999997776666666666654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=82.55 E-value=2.3 Score=35.17 Aligned_cols=46 Identities=4% Similarity=-0.170 Sum_probs=38.3
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceee
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALS 189 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~ 189 (280)
..|.+.+++++++++|+.++++|+.....++.+.+.+++. .+.+++
T Consensus 22 ~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 22 ALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred HHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 4477888999999999999999999999999998888876 444554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=82.31 E-value=27 Score=28.98 Aligned_cols=120 Identities=15% Similarity=0.143 Sum_probs=70.9
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHH--HcCCc-ccceee-CC--CC---------CCCCChHHHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN--RFGIT-FSPALS-RE--FR---------PYKPDPGPLLHI 205 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~--~~g~~-fd~v~~-~~--~~---------~~Kp~~~~~~~~ 205 (280)
.+....+..++.+.+.+.+.+-+++|-|.+.. ..+.+ ..+.. |-.+.- .+ .+ .+-=..+.=..+
T Consensus 111 ~~~~v~~~~eA~~~l~~~~~~~iflttGsk~L-~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al 189 (249)
T PF02571_consen 111 NWHYVDSYEEAAELLKELGGGRIFLTTGSKNL-PPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRAL 189 (249)
T ss_pred eEEEeCCHHHHHHHHhhcCCCCEEEeCchhhH-HHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHH
Confidence 35667889999999988875555666555443 33322 22211 111211 11 11 011122345677
Q ss_pred HHhcCCCCCcEEEEcCCc----hhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 206 CSTWEVQPNEVMMVGDSL----KDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~----~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+++++++ +++-=||- ..=+++|+++|+.++++.++.. ..+..++.+++|+.++|++
T Consensus 190 ~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~----------~~~~~~~~~~~e~l~~l~~ 249 (249)
T PF02571_consen 190 FRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE----------PYGDPVVETIEELLDWLEQ 249 (249)
T ss_pred HHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC----------CCCCcccCCHHHHHHHHhC
Confidence 8888875 55554442 1458899999999999986422 1334447899999998864
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=80.68 E-value=31 Score=28.60 Aligned_cols=95 Identities=8% Similarity=0.011 Sum_probs=57.0
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCC----------------------cccceeeCCCCCCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI----------------------TFSPALSREFRPYKP 197 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~----------------------~fd~v~~~~~~~~Kp 197 (280)
+.+.-.+.+.++.+.+++.|-++.+.++... +..+...... .-+.+++..-...
T Consensus 109 d~~~~V~d~~ea~~~~~~~~~rVflt~G~~~--l~~f~~~~~~~~~~~Rvlp~~~~~~~~~~~~~p~~~Iia~~GPfs-- 184 (257)
T COG2099 109 DNWIEVADIEEAAEAAKQLGRRVFLTTGRQN--LAHFVAADAHSHVLARVLPPPDVLAKCEDLGVPPARIIAMRGPFS-- 184 (257)
T ss_pred CceEEecCHHHHHHHHhccCCcEEEecCccc--hHHHhcCcccceEEEEEcCchHHHHHHHhcCCChhhEEEecCCcC--
Confidence 3445567889999999988766666665432 2323322222 1111222111111
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcCCchh------hHHHHHHcCCcEEEEcCC
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGDSLKD------DVACGKRAGAFTCLLDET 243 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGDs~~~------Di~~a~~~G~~~i~v~~~ 243 (280)
.+.=...+++++++ ++.-=||- . -+++|.++|+.+|++.++
T Consensus 185 -~~~n~all~q~~id---~vItK~SG-~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 185 -EEDNKALLEQYRID---VVVTKNSG-GAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred -hHHHHHHHHHhCCC---EEEEccCC-cccCcHHHHHHHHHcCCcEEEEecC
Confidence 22345677888875 66665655 4 499999999999999974
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 280 | ||||
| 3m9l_A | 205 | Crystal Structure Of Probable Had Family Hydrolase | 1e-15 | ||
| 2gfh_A | 260 | Crystal Structure Of A N-acetylneuraminic Acid Phos | 4e-05 | ||
| 2w4m_A | 270 | The Crystal Structure Of Human N-Acetylneuraminic A | 3e-04 | ||
| 2nyv_A | 222 | X-Ray Crystal Structure Of A Phosphoglycolate Phosp | 4e-04 |
| >pdb|3M9L|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 Length = 205 | Back alignment and structure |
|
| >pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase (nanp) From Mus Musculus At 1.90 A Resolution Length = 260 | Back alignment and structure |
|
| >pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid Phosphatase, Nanp Length = 270 | Back alignment and structure |
|
| >pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 1e-49
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR 125
+ ++ VFDMDGTLT+ V DF A+ A+ P DIL H+ + D
Sbjct: 4 SEIKHWVFDMDGTLTIAVHDFAAIREAL-----------SIPAEDDILTHLAALPADESA 52
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-- 183
+ + + ER + PG +L L + R G++TRN +E + G+
Sbjct: 53 AKHAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADC 112
Query: 184 FSPAL--SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
F+ A R+ P KP PG LL + W+V P+ ++MVGD D+ CG+ AG T L++
Sbjct: 113 FAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYR-FDLDCGRAAGTRTVLVN 171
Query: 242 ETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275
+ D+ ++ +L A
Sbjct: 172 LPDNPWPE-------LTDWHARDCAQLRDLLSAE 198
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 2e-24
Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 25/242 (10%)
Query: 42 TRPFSSISNFTSYMMSSFSPPKPKTRLRGVVFDMDGTL--TVPVIDFPAMYRAVLGEDEY 99
+ + S +P V+FD TL T ID Y VL + Y
Sbjct: 3 HHHHHHMGTLEAQTQGPGSMKQPTA----VIFDWYNTLIDTSINIDRTTFY-QVLDQMGY 57
Query: 100 KRVKAENPTGIDILHHIESWSPDLQRHAYQTIADF--ERQGLDRLQIMPGTAQLCGFLDS 157
K + ++ I ++ + + A + + Q D + G +L L
Sbjct: 58 KNIDLDSIPNSTIPKYLITLLGKRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKE 117
Query: 158 KKIRRGLIT----RNIKEAVDLF--HNRFGITFSPALSREFRPYKPDPGPLLHICSTWEV 211
I +++ ++ + + F S + KP P P+L + +
Sbjct: 118 NNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIG---SGDTGTIKPSPEPVLAALTNINI 174
Query: 212 QP-NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS-LTEVL 269
+P EV +GDS D+ AG + + + + + + + +++
Sbjct: 175 EPSKEVFFIGDS-ISDIQSAIEAGCLPIKYG----STNIIKDILSFKNFYDIRNFICQLI 229
Query: 270 SI 271
+I
Sbjct: 230 NI 231
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 5e-23
Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 31/234 (13%)
Query: 66 TRLRGVVFDMDGTL------------------TVPVIDFPAMYRAVLGEDEYKRVKAENP 107
++ V FD+ TL + + D V E + R +A
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASED 61
Query: 108 TGIDILHHIESWSPDLQRHAYQTIADFERQGL--DRLQIMPGTAQLCGFLDSKKIRRGLI 165
+ E+ + L+ R L D ++ GT + F+ + ++ +I
Sbjct: 62 PRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVI 121
Query: 166 TRNIKEAVDLFHNR---FGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219
+ FG+ + E YKP + +++EV+P E + +
Sbjct: 122 GNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHI 181
Query: 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
GD+ +D ++ G + +++ G + F + S+ + ++E
Sbjct: 182 GDTYAEDYQGARKVGMWAVWINQEGDKVRKLE-----ERGFEIPSIANLKDVIE 230
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 2e-21
Identities = 44/227 (19%), Positives = 70/227 (30%), Gaps = 26/227 (11%)
Query: 69 RGVVFDMDGTL--TVPVID------FPAMYRAVLGEDE----------YKRVKAENPTGI 110
+ + FD+D TL T + + M R L D K + P
Sbjct: 3 KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHF 62
Query: 111 DILHHIESWSPDLQRHAYQTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNI 169
D L + + L+ +PG ++ L G+IT
Sbjct: 63 DYL--LRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGN 120
Query: 170 KEAVDLFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDD 226
R + F + S KP P + V+P E +MVGD L D
Sbjct: 121 PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSD 180
Query: 227 VACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ KR G T + + D+ + +L +L +L
Sbjct: 181 IYGAKRVGMKTVWFRYGKHSERE--LEYRKYADYEIDNLESLLEVLA 225
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-21
Identities = 30/246 (12%), Positives = 68/246 (27%), Gaps = 47/246 (19%)
Query: 67 RLRGVVFDMDGTL--TVP-----------------------VIDF-----PAMYRAVLGE 96
+ + +FDMDGT+ T + +F L
Sbjct: 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAY 62
Query: 97 DEYKRVKAENPTGIDILHHIESWSPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFL 155
+ ++ G E+ + + + + PG L L
Sbjct: 63 EAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNL 122
Query: 156 DSKKIRRGLIT-------RNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICST 208
K ++ +++ + + E LF F + KP P
Sbjct: 123 RQKGVKLAVVSNKPNEAVQVLVEE--LFPGSFDFALG---EKSGIRRKPAPDMTSECVKV 177
Query: 209 WEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268
V ++ + +GDS + D+ + + + + + F + V + ++
Sbjct: 178 LGVPRDKCVYIGDS-EIDIQTARNSEMDEIAV--NWGFRSVPFLQ-KHGATVIVDTAEKL 233
Query: 269 LSILEA 274
+
Sbjct: 234 EEAILG 239
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 3e-21
Identities = 44/221 (19%), Positives = 77/221 (34%), Gaps = 28/221 (12%)
Query: 67 RLRGVVFDMDGTL--TVPVIDFPAMYRAVLGEDEYKRVKAEN-----PTGIDILHHIESW 119
+ ++FD+DGTL + P + + R VL A+ +
Sbjct: 3 TYQALMFDIDGTLTNSQP--AYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTE-LGI 59
Query: 120 SPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT-------RNIKEA 172
+ H D D++++ PG L L S+ +R G++T + +
Sbjct: 60 AASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRS 118
Query: 173 VDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKR 232
R +T S + KPDP PLL V P + +GDS+ D +
Sbjct: 119 YPFMM-RMAVTISA---DDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVS-DEQTAQA 173
Query: 233 AGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
A L +AD + + R ++L + +
Sbjct: 174 ANVDFGLAVWGMDPNAD-----HQKVAHRFQKPLDILELFK 209
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 3e-21
Identities = 39/236 (16%), Positives = 84/236 (35%), Gaps = 35/236 (14%)
Query: 63 KPKTRLRGVVFDMDGTL--TVPVIDFPA--------MYRAVLGEDEYK-------RVKAE 105
+ T+ + + FD+DGTL ++P D + E+ V ++
Sbjct: 18 QGMTQFKLIGFDLDGTLVNSLP--DLALSINSALKDVNLPQASENLVMTWIGNGADVLSQ 75
Query: 106 NPTGIDILHHIESWSPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGL 164
+ + D ++ + + + ++ P + L ++ +
Sbjct: 76 RAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAV 135
Query: 165 IT-------RNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217
+T + I A + H F + KP P P ++C + + P +++
Sbjct: 136 VTNKPTKHVQPILTAFGIDH-LFSEMLGG---QSLPEIKPHPAPFYYLCGKFGLYPKQIL 191
Query: 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
VGDS ++D+ AG L G Y+ + +PD+ ++L I +
Sbjct: 192 FVGDS-QNDIFAAHSAGCAVVGLTY-G-YNYNIPIAQ-SKPDWIFDDFADILKITQ 243
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 5e-21
Identities = 36/239 (15%), Positives = 70/239 (29%), Gaps = 36/239 (15%)
Query: 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGE---------------DEYKRVKAENPT-GID 111
+R + +D+ TL Y Y+ P G+
Sbjct: 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLS 60
Query: 112 ILHHIESWSPDLQRHAYQTIADFERQGLDRL--------------QIMPGTAQLCGFLDS 157
W D+ + + Q + + Q++ G +
Sbjct: 61 HGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRT 120
Query: 158 KKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPN 214
+ +R +I+ N ++ G+ F L S KPDP ++P
Sbjct: 121 RGLRLAVIS-NFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPV 179
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
VGD+ D + G + L+ D + ++ + + SL +L L+
Sbjct: 180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQAL--DPVVRDSVPKEHILPSLAHLLPALD 236
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 7e-21
Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 43/236 (18%)
Query: 69 RGVVFDMDGTLTVPVIDF-PAMYRAV----------LGEDEYKRVKAENPTGIDILHHIE 117
R ++FD+D T+ +DF A A+ L D + K N +
Sbjct: 8 RTLLFDVDDTI----LDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGK 63
Query: 118 SWSPDLQRHAYQTIADFERQGLD----------------RLQIMPGTAQLCGFLDSKKIR 161
++ + + + G + Q++ G L L ++
Sbjct: 64 MTRDEVVNTRFSAL--LKEYGYEADGALLEQKYRRFLEEGHQLIDGAFDLISNL-QQQFD 120
Query: 162 RGLITRNIKEAVDLFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICS-TWEVQPNEVM 217
++T + G+ F S + KP ++ + +
Sbjct: 121 LYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTL 180
Query: 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
++GDSL D+ G+ AG TC ++ + + + P + + L E+ IL
Sbjct: 181 IIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEI-----IPTYEIRKLEELYHILN 231
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 3e-20
Identities = 44/222 (19%), Positives = 72/222 (32%), Gaps = 23/222 (10%)
Query: 67 RLRGVVFDMDGTL--TVPVID------FPAMYRAVLGEDEYKRVKAENPTGIDILHHIES 118
+ +FD D TL + I + +D KR
Sbjct: 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRT-IGKTLEESFSILTGI 63
Query: 119 WSPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT----RNIKEAV 173
D Q + + + P T L + IR G+I+ I +
Sbjct: 64 TDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFL 123
Query: 174 DLF--HNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK 231
+ F I + +KPDP LL + P EV+ +GDS D
Sbjct: 124 RNHMPDDWFDIIIGG---EDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDS-TVDAGTAA 179
Query: 232 RAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
AG + +G +A +F D +S+L +++S+ E
Sbjct: 180 AAGVSFTGVT-SGMTTAQEF--QAYPYDRIISTLGQLISVPE 218
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 4e-20
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 39/227 (17%)
Query: 67 RLRGVVFDMDGTL--TVPVIDFPA--------MYRAVLGEDEYKRVKAENPTGIDILHHI 116
LR ++FD+DGTL + D + D + G+ L +
Sbjct: 2 SLRVILFDLDGTLIDSAK--DIALALEKTLKELGLEEYYPDNVTKY-IGG--GVRAL--L 54
Query: 117 E-SWSPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT-------R 167
E + + + + + P L SK + +++ +
Sbjct: 55 EKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 114
Query: 168 NIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDV 227
I + ++L F + F KP P P+L +P + ++VGD+ D+
Sbjct: 115 KILDILNLSG-YFDLIVGG---DTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADI 169
Query: 228 ACGKRAGAFTCLLDETGRYSADDFT-KSNLQPDFRVSSLTEVLSILE 273
GKRAG T L + ++ PDF +S ++++ +++
Sbjct: 170 EAGKRAGTKTALA-------LWGYVKLNSQIPDFTLSRPSDLVKLMD 209
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 8e-20
Identities = 35/231 (15%), Positives = 69/231 (29%), Gaps = 41/231 (17%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGE-------------------DEYKRVKAENP 107
+ + V+ D TL + F ++ + + + +
Sbjct: 2 KYKAVLVDFGNTL----VGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDE 57
Query: 108 TGIDILHHIESWSPDLQRHAYQTIADFERQGL--DRLQIMPGTAQLCGFLDSKKIRRGLI 165
G++ + + + + + + + + + T + L S + L+
Sbjct: 58 DGLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALV 117
Query: 166 TRNIKEAVDLFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222
+ N V +F + F S E + KP+P + VGD
Sbjct: 118 S-NASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFAL---AKVGYPAVHVGDI 173
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ D KR+ LLD Y RV +L E L +E
Sbjct: 174 YELDYIGAKRSYVDPILLDRYDFYP---------DVRDRVKNLREALQKIE 215
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 9e-20
Identities = 22/174 (12%), Positives = 52/174 (29%), Gaps = 14/174 (8%)
Query: 114 HHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV 173
H I L + + + + ++ +++
Sbjct: 5 HVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDT 64
Query: 174 DLFHNRF----------GITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSL 223
++ I S + + + KPD + ++ E +MVG++
Sbjct: 65 EVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTF 124
Query: 224 KDDVACGKRAGAFTCLLDETGRYSADD----FTKSNLQPDFRVSSLTEVLSILE 273
+ D+ RAG L D+ + P + ++ + E L +L+
Sbjct: 125 ESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 5e-19
Identities = 50/239 (20%), Positives = 80/239 (33%), Gaps = 48/239 (20%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAVLGE----------------DEYKRVKAE-----NP 107
R V FD GTL ++ L DEY+++ E
Sbjct: 3 RAVFFDSLGTL----NSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAG 58
Query: 108 TGIDILHHI--ESWSPDLQRHAYQTIADFERQGLD----RLQIMPGTAQLCGFLDSKKIR 161
L I E +++ ++ +F L ++ P ++ L K
Sbjct: 59 KPYRPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSL-KGKYH 117
Query: 162 RGLIT-------RNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPN 214
G+IT +A+ + + F + S E +KP P V+
Sbjct: 118 VGMITDSDTEQAMAFLDALGI-KDLFDSITT---SEEAGFFKPHPRIFELALKKAGVKGE 173
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
E + VGD+ D K G + LLD G + DF VS L EV+ I++
Sbjct: 174 EAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWD-----KCDFIVSDLREVIKIVD 227
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 9e-19
Identities = 38/222 (17%), Positives = 78/222 (35%), Gaps = 23/222 (10%)
Query: 68 LRGVVFDMDGTL--TVPVIDFPAMYRAV------LGEDEYKRVKAENPTGIDILHHIESW 119
+FD+DGTL +V A A+ L R +G +L +
Sbjct: 6 QTSFIFDLDGTLTDSVYQN-VAAWKEALDAENIPLAMWRIHRKIGM--SGGLMLKSLSRE 62
Query: 120 -----SPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD 174
+ + + A + ++ +PG +L LD + ++ + T +
Sbjct: 63 TGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTAT 122
Query: 175 LFHNRFGIT--FSPALSREFRPY-KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK 231
+ + ++R+ Y KPDP L +E +++GD++ D+ +
Sbjct: 123 INLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIW-DMLAAR 181
Query: 232 RAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
R A L +G Y + + ++L+ L+
Sbjct: 182 RCKATGVGL-LSGGYDIGELER--AGALRVYEDPLDLLNHLD 220
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 1e-18
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 45/242 (18%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAVL---------------GEDEYKRVKAENPTGIDIL 113
+ + FD+D T+ F R + Y + N
Sbjct: 6 KNLFFDLDDTI----WAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEY 61
Query: 114 HHIESWSPDLQRH----------------AYQTIADFERQGLDRLQIMPGTAQLCGFLDS 157
+ +L R A + DF + +MP ++ +L +
Sbjct: 62 GEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYL-A 120
Query: 158 KKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPN 214
+ +++ +E G+ F + S + KP P S + +
Sbjct: 121 PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELR 180
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
E +M+GDS + D+ G + T R T QP + + SL E++++LE
Sbjct: 181 ESLMIGDSWEADITGAHGVGMHQAFYNVTER------TVFPFQPTYHIHSLKELMNLLEG 234
Query: 275 NF 276
+
Sbjct: 235 HH 236
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 1e-18
Identities = 50/244 (20%), Positives = 89/244 (36%), Gaps = 45/244 (18%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL--------------GEDEYKRVKAENPTGIDI 112
R+R V FD+D TL ID R + E E K + +
Sbjct: 17 RVRAVFFDLDNTL----IDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 72
Query: 113 LHHIESWSPDLQRHAYQTI------------------ADFERQGLDRLQIMPGTAQLCGF 154
H + D++ ++ ++ L + + +
Sbjct: 73 FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 132
Query: 155 LDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEV 211
L K++R L+T ++ F + E + KP P H C V
Sbjct: 133 L-RKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGV 191
Query: 212 QPNEVMMVGDSLKDDVACGKRAGA-FTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270
QP + +MVGD+L+ D+ G AG T ++++GR + P + VSS+ E+ +
Sbjct: 192 QPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTS----SPMPHYMVSSVLELPA 247
Query: 271 ILEA 274
+L++
Sbjct: 248 LLQS 251
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 1e-18
Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 18/184 (9%)
Query: 67 RLRGVVFDMDGTL--TVPVIDFPAMYRAVLGEDEYKRVKAE--NPTGIDILHHIESWSPD 122
+ ++D+ GTL A + L + + IE+++P+
Sbjct: 5 KYHDYIWDLGGTLLDNYE--TSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPN 62
Query: 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT---RNIKEAVDLF--H 177
L+ + + E + L+ + G + L + ++ R L++ + E ++
Sbjct: 63 LEN-FLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIA 121
Query: 178 NRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237
F + S KP+P +L++ + Q + +++GD D+ G+ AG T
Sbjct: 122 AYFTEVVT---SSSGFKRKPNPESMLYLRE--KYQISSGLVIGDR-PIDIEAGQAAGLDT 175
Query: 238 CLLD 241
L
Sbjct: 176 HLFT 179
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 5e-18
Identities = 45/235 (19%), Positives = 73/235 (31%), Gaps = 26/235 (11%)
Query: 63 KPKTRLRGVVFDMDGTL--TVPVI------------DFPAMYRAVLGEDEYKRVKAENPT 108
K LR VFD GTL + ++R E + R
Sbjct: 9 KLVDSLRACVFDAYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYA 68
Query: 109 GIDILHHIESWSPDLQRHAYQTIADFER---QGLDRLQIMPGTAQLCGFLDSKKIRRGLI 165
L E+ + L+ + + + L P A+ L S ++
Sbjct: 69 DFWQLTD-EALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAIL 127
Query: 166 TRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222
+ E + + LS + + YKPDP C V PNEV V +
Sbjct: 128 SNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSN 187
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277
D+ + G T ++ G +V+SL+E+ +L N
Sbjct: 188 A-WDLGGAGKFGFNTVRINRQGN----PPEYEFAPLKHQVNSLSELWPLLAKNVT 237
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 79.6 bits (196), Expect = 1e-17
Identities = 32/241 (13%), Positives = 64/241 (26%), Gaps = 35/241 (14%)
Query: 65 KTRLRGVVFDMDGTL--TVPVIDFPAMYRAV-----------------LGEDEYKRVKAE 105
+ ++ V+F GT L + ++ R E
Sbjct: 3 RMKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTE 62
Query: 106 NPTGIDIL---HHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRR 162
P D+Q + + G ++ L + I+
Sbjct: 63 MPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKI 122
Query: 163 GLIT-------RNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQP-N 214
G T + + L + +P + +P P V P N
Sbjct: 123 GSTTGYTREMMDIVAKEAALQGYKPDFLVTPD---DVPAGRPYPWMCYKNAMELGVYPMN 179
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK-SNLQPDFRVSSLTEVLSILE 273
++ VGD++ D+ G+ AG +T + + N+ + V +
Sbjct: 180 HMIKVGDTVS-DMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFV 238
Query: 274 A 274
Sbjct: 239 E 239
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-17
Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 25/225 (11%)
Query: 71 VVFDMDGTL--TVPVID--FPAMYRAVLGEDEYKRVKAENPTGI-----DILHHIESWSP 121
V+FD+DGTL + V G + + ++L ++
Sbjct: 7 VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 66
Query: 122 DLQRHAYQTIADF-----ERQGLDRLQIMPGTAQLCGFL-DSKKIRRGLITRNIKEAVDL 175
++ + + ER + + ++ G +L L + GL+T N + +
Sbjct: 67 EIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRH 126
Query: 176 FHNRFGIT--FSPALSR-EFRPYKPDPGPLLHICST---WEVQPNEVMMVGDSLKDDVAC 229
GI F + P L P++++++GD+ D+ C
Sbjct: 127 KLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEH-DIRC 185
Query: 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
+ A + + TG ++ ++ + P + E +L +
Sbjct: 186 ARELDARSIAVA-TGNFTMEELARHK--PGTLFKNFAETDEVLAS 227
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 78.8 bits (194), Expect = 1e-17
Identities = 39/228 (17%), Positives = 75/228 (32%), Gaps = 24/228 (10%)
Query: 66 TRLRGVVFDMDGTL--TVPVI------------DFPAMYRAVLGEDEYKRVKAENPTGID 111
++G+ FD+ GTL V+ + A++R E + R
Sbjct: 2 DYIKGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQ 61
Query: 112 ILHH--IESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNI 169
+ L RL L + ++ +++
Sbjct: 62 QATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGS 121
Query: 170 KEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDD 226
+++D + G+ F LS + + YKPD + + ++ V + D
Sbjct: 122 PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASN-AWD 180
Query: 227 VACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
+ G TC ++ TG F + PD+ V+SL V+ + E
Sbjct: 181 ATGARYFGFPTCWINRTGN----VFEEMGQTPDWEVTSLRAVVELFET 224
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 1e-17
Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 34/222 (15%)
Query: 67 RLRGVVFDMDGTLTVPVID-FPAMYRAV------LG-----EDEYKRVKAENPTGIDILH 114
+ ++D+DGTL +D + A+ + E + + + D+L
Sbjct: 3 QKTAFIWDLDGTL----LDSYEAILSGIEETFAQFSIPYDKEKVREFIF--KYSVQDLLV 56
Query: 115 HIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD 174
+ Q A + ++ +MPG ++ + D I++ + T A
Sbjct: 57 RVAEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT 116
Query: 175 LFHNRFGIT--FSPAL-SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK 231
+ G+ F+ L S+ KP P ++ +++ + +GD DV +
Sbjct: 117 IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDR-TLDVEFAQ 174
Query: 232 RAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+G + E+ + + R+ +L ++ I E
Sbjct: 175 NSGIQSINFLESTY-----------EGNHRIQALADISRIFE 205
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 2e-16
Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 28/225 (12%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAEN------PTGIDILHHIESW 119
+ V+FD+DGTLT + L + + + + P ++
Sbjct: 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYYNF 61
Query: 120 SPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT-------RNIKE 171
+ A F+ +G+ ++ G L L + T + I E
Sbjct: 62 DEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILE 121
Query: 172 AVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK 231
L F S + + + ++ ++ +M+GD + DV
Sbjct: 122 HFKLAF-YFDAIVG---SSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDR-EYDVIGAL 176
Query: 232 RAGAFTCLLDETGRY---SADDFTKSNLQPDFRVSSLTEVLSILE 273
+ + + Y S ++ + ++ V+S+ E+ +
Sbjct: 177 KNNLPSIGV----TYGFGSYEELKNAG--ANYIVNSVDELHKKIL 215
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 1e-15
Identities = 36/237 (15%), Positives = 82/237 (34%), Gaps = 37/237 (15%)
Query: 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVL------------GEDEYKRVKAENPTGIDI 112
K ++ + FD D TL ++ V ++ + + I
Sbjct: 5 KELIKVIAFDADDTL----WSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQI 60
Query: 113 LHH-------------IESWSPDLQRHAYQTIADFERQGLDR-LQIMPGTAQLCGFL-DS 157
L + ++ + + + I D + L ++++PG + L ++
Sbjct: 61 LGYGAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKET 120
Query: 158 KKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNE 215
K + + T+ + R G++ F L + S ++ P+E
Sbjct: 121 GKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS----DKTEKEYLRLLSILQIAPSE 176
Query: 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
++MVG+S K D+ G + + + + + +V L ++LS+L
Sbjct: 177 LLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 2e-15
Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 40/243 (16%)
Query: 66 TRLRGVVFDMDGTLTVPVIDF-PAMYRAV----------LGEDEYKRVKAENPTGIDILH 114
T + + FD GTL ID+ + A+ DE V N
Sbjct: 4 TDFKALTFDCYGTL----IDWETGIVNALQPLAKRTGKTFTSDELLEVFGRN-ESPQQTE 58
Query: 115 HIESWSPDLQRHAYQTIADFERQGLD--------------RLQIMPGTAQLCGFLDSKKI 160
+ D+ R Y I + GL+ P T + +L K
Sbjct: 59 TPGALYQDILRAVYDRI--AKEWGLEPDAAEREEFGTSVKNWPAFPDTVEALQYL-KKHY 115
Query: 161 RRGLITRNIKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHI---CSTWEVQPNEV 216
+ +++ + L + + G+ F ++ + YKP+P ++ + ++ ++
Sbjct: 116 KLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDI 175
Query: 217 MMVGDSLKDDVACGKRAGAFTCLLDETGR---YSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ +SL D AG + + Y A DFR +S+ E+ +
Sbjct: 176 LHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHK 235
Query: 274 ANF 276
Sbjct: 236 QAL 238
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 4e-15
Identities = 45/254 (17%), Positives = 84/254 (33%), Gaps = 41/254 (16%)
Query: 54 YMMSSFSPPKPKTRLRGVVFDMDGTLT-----VPVIDFPAMYRAV---LGEDEYKRVKAE 105
+M+ + + ++ D GT PV F +++ + + E A
Sbjct: 2 HMLKANVFCAGP--VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAE-----AR 54
Query: 106 NPTGIDILHHIES------------------WSPDLQRHAYQTIADFERQGL-DRLQIMP 146
P G + HI + + + Y A + + + R Q++P
Sbjct: 55 EPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIP 114
Query: 147 GTAQLCGFLDSKKIRRGLIT---RNIKEAVDLFHNRFGITFSPALSR-EFRPYKPDPGPL 202
G ++ L ++ I+ G T + + G T + + + +P P
Sbjct: 115 GWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMA 174
Query: 203 LHICSTWEVQP-NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK-SNLQPDF 260
L + EV N + V D+L + G RAG +T + +G D L D
Sbjct: 175 LKVALELEVGHVNGCIKVDDTLPG-IEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDE 233
Query: 261 RVSSLTEVLSILEA 274
+ S L
Sbjct: 234 QQSYRQHAEQRLFN 247
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 1e-14
Identities = 46/249 (18%), Positives = 78/249 (31%), Gaps = 51/249 (20%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAV---LGED-------------EYKRVKA--ENPTGI 110
+ VVFD GTL D ++ A EY ++A
Sbjct: 3 KAVVFDAYGTL----FDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADF 58
Query: 111 DILHHIESWSPDLQRHAYQTIADFER---QGLDRLQIMPGTAQLCGFLDSKKIRRGLITR 167
+ E+ + L + F Q +RL P AQ L ++R +++
Sbjct: 59 WSVTR-EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAEL--APLKRAILSN 115
Query: 168 NIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224
+ + G+T F +S + R +KP P + V P EV+ V +
Sbjct: 116 GAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNG- 174
Query: 225 DDVACGKRAGAFTCLLDETGRYSADDFTKSN-------------------LQPDFRVSSL 265
DV K G + + + S PDF V +L
Sbjct: 175 FDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPAL 234
Query: 266 TEVLSILEA 274
++ ++
Sbjct: 235 GDLPRLVRG 243
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 9e-14
Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 28/225 (12%)
Query: 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAE------NPTGIDILHHIES 118
K V+FD+DGTLT P + L K P D
Sbjct: 26 KKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPL-HDTFKEYYK 84
Query: 119 WSPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT----RNIKEAV 173
+ + A + F +G+ +I ++ L + T + +
Sbjct: 85 FEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL 144
Query: 174 DLF--HNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQ-PNEVMMVGDSLKDDVACG 230
F F S + ++ V+ ++V+MVGD K D+
Sbjct: 145 RYFDIDRYFKYIAG---SNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDR-KYDIIGA 200
Query: 231 KRAGAFTCLLDETGRY---SADDFTKSNLQPDFRVSSLTEVLSIL 272
K+ G + + Y S ++ ++S P + V ++ + IL
Sbjct: 201 KKIGIDSIGV----LYGYGSFEEISESE--PTYIVENVESIKDIL 239
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 9e-14
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP P V+ ++ +M+GD + DV +R G + TG++ D
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-RTGKFRPSDEHHPE 248
Query: 256 LQPDFRVSSLTEVLSILE 273
++ D V +L E + +L
Sbjct: 249 VKADGYVDNLAEAVDLLL 266
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 2e-13
Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 41/229 (17%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHI--------- 116
T + + FD+DGTL I + K + +P I +
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTF-----KELGVPSPDAKTIRGFMGPPLESSFA 56
Query: 117 ESWSPDLQRHAYQT-IADFERQGLDRLQIMPGTAQLCGFLDSK--------KIRRGLITR 167
S D A Q + ++ +G+ Q+ P L L S K +
Sbjct: 57 TCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTST--AQ 114
Query: 168 NIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDV 227
++ + +++ H F + S P+K D + T ++ P + +++GD+ K D+
Sbjct: 115 DMAKNLEIHH-FFDGIYG---SSPEAPHKADV--IHQALQTHQLAPEQAIIIGDT-KFDM 167
Query: 228 ACGKRAGAFTCLLDETGRY---SADDFTKSNLQPDFRVSSLTEVLSILE 273
+ G + + D PD+ EVL+ +
Sbjct: 168 LGARETGIQKLAIT----WGFGEQADLLNYQ--PDYIAHKPLEVLAYFQ 210
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 65.8 bits (160), Expect = 8e-13
Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 33/243 (13%)
Query: 60 SPPKPKTRLRGVVFDMDGTL--TVPVID-----FPAMYRAVLGED------EYKRVKAEN 106
+ ++ V FD D TL + F A+ L V+ N
Sbjct: 5 IAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRN 64
Query: 107 ----PTGIDILHH------IESWSPDLQRHAYQTIADFERQGLDR-LQIMPGTAQLCGFL 155
G + IE ++ Q I + R L ++++ G + +
Sbjct: 65 LKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAI 124
Query: 156 DSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQP 213
+ LIT+ + + G++ F + DP + S +++
Sbjct: 125 -AADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS----EKDPQTYARVLSEFDLPA 179
Query: 214 NEVMMVGDSLKDDVACGKRAGAFTCLL--DETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271
+M+G+SL+ DV G + T + D ++ V + +
Sbjct: 180 ERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAA 239
Query: 272 LEA 274
+ A
Sbjct: 240 VRA 242
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 4e-12
Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 20/208 (9%)
Query: 71 VVFDMDGTLTVPVIDFPAM---YRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHA 127
+ FD+ GT+ +D + +R E + + + + L+
Sbjct: 4 LAFDIFGTV----LDTSTVIQEFRNKQLEYTWLLTIMGKYVEFEEITK-ITLRYILKVRG 58
Query: 128 YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS 185
++ D E L+ T L + ++ ++ V R G+ F
Sbjct: 59 EESKFDEELNKWKNLKAYEDTKYLKEISEIAEV--YALSNGSINEVKQHLERNGLLRYFK 116
Query: 186 PALS-REFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
S + YKP P + + E +V S DV K AG + ++
Sbjct: 117 GIFSAESVKEYKPSPKVYKYFLD--SIGAKEAFLVS-SNAFDVIGAKNAGMRSIFVNRKN 173
Query: 245 RYSADDFTKSNLQPDFRVSSLTEVLSIL 272
+PD V+ E+ +
Sbjct: 174 T----IVDPIGGKPDVIVNDFKELYEWI 197
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 7e-12
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+ L + P E +M+GD +DDV + G L+ +TG+Y A D K N
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-KTGKYKAADEEKIN 237
Query: 256 LQPDFRVSSLTEVLSILEAN 275
P S + + +
Sbjct: 238 PPPYLTCESFPHAVDHILQH 257
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 1e-11
Identities = 32/167 (19%), Positives = 51/167 (30%), Gaps = 38/167 (22%)
Query: 140 DRLQIMPGTAQLCGFLDSKKIR-----------RGLITRNIKEAVDLFHNRF-------- 180
D + + G L RG T + +
Sbjct: 47 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFT---EAQFETLTEWMDWSLADRD 103
Query: 181 ----GITFSP----ALSREFRPY----KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228
GI + P EFR KP PG LL + MVGD L+ D+
Sbjct: 104 VDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQ 162
Query: 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275
A T +L TG+ ++ D+ ++SL ++ ++
Sbjct: 163 AAVAANVGTKVLVRTGKPIT---PEAENAADWVLNSLADLPQAIKKQ 206
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 3e-11
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+P + I + V + MVGD L DV GK AG + L+ TG + +D ++
Sbjct: 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILV-LTGETTPEDLERAE 253
Query: 256 LQPDFRVSSLTEVLSILE 273
+PDF +L E+ ++
Sbjct: 254 TKPDFVFKNLGELAKAVQ 271
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-11
Identities = 39/235 (16%), Positives = 83/235 (35%), Gaps = 46/235 (19%)
Query: 67 RLRGVVFDMDGTL--TVPV-------------IDFP-AMYRAVLGEDEYKRVKAENPTGI 110
+L+ V+FDMDG L ++P +D G TG
Sbjct: 23 KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGR-----------TGA 71
Query: 111 DILHHIESWSPDLQRHAYQTIADFER-----QGLDRLQIMPGTAQLCGFLDSKKIRRGLI 165
++ + + + + + + MPG +L + S+ + ++
Sbjct: 72 STINIVFQRELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVV 131
Query: 166 T----RNIKEAVDLFHNRFGITFSPAL---SREFRPYKPDPGPLLHICSTWEVQPNEVMM 218
T ++ E ++ + F F L + + + KP+P P L ++ +E ++
Sbjct: 132 TGSGQLSLLERLE---HNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVV 188
Query: 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ ++ V G +AG FT ++ TG + D S+ + +
Sbjct: 189 IENAPL-GVEAGHKAGIFTIAVN-TGPLDGQVLLDAG--ADLLFPSMQTLCDSWD 239
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 6e-11
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+ + +E +MVGD+ D+ G AG T L+ TG + T
Sbjct: 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLV-HTGVTKREHMTDDM 241
Query: 256 LQPDFRVSSLTEVLSILEA 274
+P + SLTE + +E
Sbjct: 242 EKPTHAIDSLTEWIPYIEG 260
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-10
Identities = 27/168 (16%), Positives = 45/168 (26%), Gaps = 36/168 (21%)
Query: 140 DRLQIMPGTAQLCGFLDSKKIR-----------RGLITRNIKEAVDLFHNRF-------- 180
+ + P + I RG A + R
Sbjct: 53 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGW---SAFAAVNGRVLELLREEG 109
Query: 181 ----GITFSP----ALSREFRPY----KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228
+ + P KP+PG L+ + ++VGD L D+
Sbjct: 110 VFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLA-DMQ 168
Query: 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE-VLSILEAN 275
GKRAG L + F L+ + L + ++ N
Sbjct: 169 AGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLGRDN 216
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-10
Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 20/227 (8%)
Query: 64 PKTRLRGVVFDMDGTL--TVPVIDFPAMYRAVLGE-------DEYKRVKAENPTGIDILH 114
P V+FD+DG L + +I ++++VL E E +L
Sbjct: 24 PDAPFDAVLFDLDGVLVESEGIIA--QVWQSVLAERGLHLDLTEIAM-YFTGQRFDGVLA 80
Query: 115 HIESWSP-DLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV 173
++ + + + + G A+ L + + + + + + +
Sbjct: 81 YLAQQHDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRL 140
Query: 174 DLFHNRFGIT--FSPAL---SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228
L G+T + S KP P + P +++ DS+ A
Sbjct: 141 HLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVT-GGA 199
Query: 229 CGKRAGAFTCLLDETGRYSADDFTK-SNLQPDFRVSSLTEVLSILEA 274
G AGA L G D S L ++S E+ + L
Sbjct: 200 AGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE 246
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-10
Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 28/226 (12%)
Query: 68 LRGVVFDMDGTL--TVPV-----IDFPAMYRAVLGEDEYKRVK----AENPTGIDILHHI 116
L+ V+FDMDG L ++P + L +E + A +
Sbjct: 23 LKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERG 82
Query: 117 ESWSPD-LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT----RNIKE 171
+ + ++ +F + + + MPG ++ + S+ + ++T ++ +
Sbjct: 83 HDATEEEIKAIYQAKTEEFNK--CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLD 140
Query: 172 AVDLFHNRFGITFSPAL---SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228
++ + F F L + + + KP+P P L +PNE +++ ++ V
Sbjct: 141 RLN---HNFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPL-GVQ 196
Query: 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
G AG FT + TG + + S+ + E
Sbjct: 197 AGVAAGIFTIAV-NTGPLHDNVLLNE--GANLLFHSMPDFNKNWET 239
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-10
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP P + + + E ++VGD+L+ D+ G +AG T L+ +G S DD
Sbjct: 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV-LSGVSSLDDIDSMP 234
Query: 256 LQPDFRVSSLTEVLSIL 272
+P + S+ E + ++
Sbjct: 235 FRPSWIYPSVAE-IDVI 250
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-10
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT--- 252
KP + + +V +VGD + DVA GK GA T L+ TG + ++
Sbjct: 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLV-LTGVTTRENLDQMI 245
Query: 253 -KSNLQPDFRVSSLTEVLSILEA 274
+ L+PD+ +SL +++ LE
Sbjct: 246 ERHGLKPDYVFNSLKDMVEALEG 268
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 3e-10
Identities = 31/244 (12%), Positives = 63/244 (25%), Gaps = 43/244 (17%)
Query: 71 VVFDMDGTLTVPVIDFPAMY---RAVLGEDEYKRVKAENPTGIDILHHIESW--SPDLQR 125
+ +D + A+ L + + + W L
Sbjct: 133 PLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 126 HAYQT--IADFERQGLDR---LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF 180
+ F+ + + L+ + L L G+ T +
Sbjct: 193 DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252
Query: 181 GIT----------------FSPALSREFRPYKPDPGPLLHI--------------CSTWE 210
G+ + KP+P +
Sbjct: 253 GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI 312
Query: 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK-SNLQPDFRVSSLTEVL 269
V ++V +VGDS D+ ++ GA TG D + D+ ++ L E+
Sbjct: 313 VNKDDVFIVGDS-LADLLSAQKIGATFIGT-LTGLKGKDAAGELEAHHADYVINHLGELR 370
Query: 270 SILE 273
+L+
Sbjct: 371 GVLD 374
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264 | Back alignment and structure |
|---|
Score = 57.1 bits (139), Expect = 7e-10
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+ + + N+ +MVGD+ D+ G T L+ TG + ++
Sbjct: 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLV-TTGFTTVEEVPDLP 240
Query: 256 LQPDFRVSSLTEVLSILEA 274
+QP + ++SL E + E
Sbjct: 241 IQPSYVLASLDE-WTFNEG 258
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 57.1 bits (139), Expect = 8e-10
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP + + V+ +V+MVGD+ + D+ G + G + L+ +G
Sbjct: 183 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLV-TSGFTPKSAVPTLP 241
Query: 256 LQPDFRVSSLTE 267
P + V SL E
Sbjct: 242 TPPTYVVDSLDE 253
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 2e-09
Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 27/284 (9%)
Query: 10 LTVQIPSHFLSKYQNHHKFMPLFLSKSFLFLPTRPFSSISNFTSYMMSSFSPPKPKTRLR 69
+TV+ + L+ YQN + +K+ L T P S + T + S L+
Sbjct: 3 MTVEYTASDLATYQNEVNE-QIAKNKAHLESLTHPGSKV---TFPIDQDISATPQNPNLK 58
Query: 70 GVVFDMDGTL--TVPVIDFPAMYRAV---------LGEDEYKRVKAENPTGIDILHHIES 118
FD+D L + I M +++ L ++ + +
Sbjct: 59 VFFFDIDNCLYKSSTRI-HDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLV 117
Query: 119 WSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLI---------TRNI 169
+ Y + D D L+ + L L
Sbjct: 118 MFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRC 177
Query: 170 KEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVAC 229
+ + G+T+ + KP + E D ++
Sbjct: 178 LRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIET 237
Query: 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
G + G TC+ ++ + +S + E+ ++
Sbjct: 238 GIKLGMKTCIH--LVENEVNEILGQTPEGAIVISDILELPHVVS 279
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-09
Identities = 32/162 (19%), Positives = 48/162 (29%), Gaps = 34/162 (20%)
Query: 139 LDRLQIMPGTAQLCGFLDSKKIR-----------RGLITRNIKEAVDLFHNRF------- 180
D +PG+ Q L RGL ++ H++
Sbjct: 23 PDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDT---ATLNAIHDKMHRALAQM 79
Query: 181 -----GITFSPALSREF---RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKR 232
I P + R KP PG I ++V V VGDSL+ D+ +
Sbjct: 80 GGVVDAIFMCPHGPDDGCACR--KPLPGMYRDIARRYDVDLAGVPAVGDSLR-DLQAAAQ 136
Query: 233 AGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE-VLSILE 273
AG L+ TG + L +L+
Sbjct: 137 AGCAPWLVQ-TGNGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ 177
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* Length = 306 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-09
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDF---- 251
KP P I + + P +MVGD L+ D+ G R G T L TG ++
Sbjct: 215 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLT-LTGVSRLEEAQAYL 273
Query: 252 --TKSNLQPDFRVSSLTEVLSILE 273
+ +L P + V S+ ++ LE
Sbjct: 274 AAGQHDLVPHYYVESIADLTEGLE 297
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-09
Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 30/239 (12%)
Query: 49 SNFTSYMMSSFSPPKPKTRLRGVVFDMDGTL--TVPVI-----DFPAMYRAVLGEDEYKR 101
+N + M + P ++ +FD+DGT+ + P I DF E
Sbjct: 17 ANIQTIAMPLTTKPLSL-KINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHI 75
Query: 102 VKAENPTGIDILHHIESWSPDLQRHAYQT--IADFERQGLDRLQIMPGTAQLCGFLDSKK 159
G I ++PD Y + + + +PG +LC L++
Sbjct: 76 SH-----GWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALP 130
Query: 160 IRR-GLITRNIKEAVDLFHNRFGITFSPAL--SREFRPYKPDPGP-------LLHICSTW 209
+ + T ++ + + I + + + KP P P L +
Sbjct: 131 KEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQ 190
Query: 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268
+ ++V++ D+ +A GK AG + + D + D V + +
Sbjct: 191 DPSKSKVVVFEDAPA-GIAAGKAAGCKIVGI--ATTFDLDFLKEK--GCDIIVKNHESI 244
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 54.8 bits (131), Expect = 5e-09
Identities = 33/262 (12%), Positives = 70/262 (26%), Gaps = 56/262 (21%)
Query: 56 MSSFSPPKPKTRLRGVVFDMDGTLT----VPVIDFP-----------------------A 88
M S P + ++ D++GT T V I FP +
Sbjct: 1 MVVLSVPAE---VTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVS 57
Query: 89 MYRAVLGEDEYKRVKAENPTGI------------DILHHIESW-SPDLQRHAYQTIADFE 135
+ R ED + P ++ ++ S D + A + +
Sbjct: 58 LLRKQAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHM 117
Query: 136 -----RQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI-TFSPALS 189
G + + ++ + + EA L +
Sbjct: 118 WRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD 177
Query: 190 REF---RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY 246
F +K + I + N ++ + D ++ A + A ++ R
Sbjct: 178 GHFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASA-AEEADVHVAVVV---RP 233
Query: 247 SADDFTKSNLQPDFRVSSLTEV 268
T ++S +E+
Sbjct: 234 GNAGLTDDEKTYYSLITSFSEL 255
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} Length = 263 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 9e-09
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 199 PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQP 258
P ++ E+ MVGD L D+A K+ G ++ TG S +D KS +P
Sbjct: 188 PNEPMYEVVREMFPGEELWMVGDRLDTDIAFAKKFGMKAIMV-LTGVSSLEDIKKSEYKP 246
Query: 259 DFRVSSLTEVLSILE 273
D + S+ E++ L+
Sbjct: 247 DLVLPSVYELIDYLK 261
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-08
Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Query: 131 IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL 188
I D+ + L + +++ + L
Sbjct: 6 IVDYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVL 65
Query: 189 -SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYS 247
S E KP+ ++ + ++V DS+ +V AG + R
Sbjct: 66 LSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSI-LNVRGAVEAGLVGVYYQQFDRAV 124
Query: 248 ADDFTKSNLQPDF 260
+ L+ +F
Sbjct: 125 VEIVGLFGLEGEF 137
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 3e-08
Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 19/217 (8%)
Query: 68 LRGVVFDMDGTL--TVPV-----IDFPAMYRAVLGEDEYKRVKAENPTGI-DILHHIESW 119
+ ++FDMDG L T F + N + + + E
Sbjct: 5 VEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYD 64
Query: 120 SPDLQRHAYQTIADFERQGLD-RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN 178
D+ + + L + I P ++ + S+ + GL + ++K +
Sbjct: 65 KWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALE 124
Query: 179 RFGIT--FSPALSREFRPY-KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGA 235
+ F LS E KP+P L VQ + +++ DS K +A G A
Sbjct: 125 ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEK-GIAAGVAADV 183
Query: 236 FTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272
+ + D + + SLT+VL ++
Sbjct: 184 EVWAIRDN--EFGMDQSA----AKGLLDSLTDVLDLI 214
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 5e-08
Identities = 46/226 (20%), Positives = 83/226 (36%), Gaps = 29/226 (12%)
Query: 60 SPPKPKTRLRGVVFDMDGTLTVPVID-----FPAMYRAV--LG-----EDEYKR-VKAEN 106
S P+ + +FDMDG L ID A + LG +E +
Sbjct: 4 STPRQ---ILAAIFDMDGLL----IDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRI 56
Query: 107 PTGIDILHHIESWS-PDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLI 165
+D+ + + W+ P Q + IA + ++PG + + + GL
Sbjct: 57 DMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLA 116
Query: 166 TRNIKEAVDLFHNRFGIT--FSPALSREFRPY-KPDPGPLLHICSTWEVQPNEVMMVGDS 222
+ + ++ F + F S E PY KP P L + V P + + DS
Sbjct: 117 SASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDS 176
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268
+ + K A + ++ + F + + ++SSLTE+
Sbjct: 177 VN-GMIASKAARMRSIVVPAPEAQNDPRFVLA----NVKLSSLTEL 217
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 1e-07
Identities = 19/151 (12%), Positives = 35/151 (23%), Gaps = 7/151 (4%)
Query: 127 AYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVD-LFHNRFGITFS 185
A + + Q+ PG L + + I + L +
Sbjct: 20 FGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPVNDWMIA 79
Query: 186 PALSREFRPYKPDPGPLLHICSTWEVQP-NEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
P P V +++ + G AG +T L G
Sbjct: 80 AP---RPTAGWPQPDACWMALMALNVSQLEGCVLISGDP-RLLQSGLNAGLWTIGLASCG 135
Query: 245 RYSADDFTK-SNLQPDFRVSSLTEVLSILEA 274
++ L R + L +
Sbjct: 136 PLCGLSPSQWQALNNAEREQRRAQATLKLYS 166
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-07
Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 16/178 (8%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAY 128
+ + +D+ G L + RA + + +E L +
Sbjct: 5 KALFWDIGGVLLT--NGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLE 62
Query: 129 QTIADFERQGLDR---------LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR 179
Q + R Q P L L ++ R + ++ +
Sbjct: 63 QVVFYQPRDFTPEDFRAVMEEQSQPRPEVLALARDL-GQRYRMYSLNNEGRDLNEYRIRT 121
Query: 180 FGIT--FSPA-LSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG 234
FG+ S KP+P + +V+P E +MV D L +V + G
Sbjct: 122 FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRL-QNVQAARAVG 178
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-06
Identities = 38/229 (16%), Positives = 85/229 (37%), Gaps = 29/229 (12%)
Query: 66 TRLRGVVFDMDGTL--TVPVIDFPAMYRAVLG--------EDEYKRVKAENPTGIDILHH 115
+ ++FD DG L + + + +L E+ +R T +IL
Sbjct: 2 SGFDLIIFDCDGVLVDSEIIAA--QVESRLLTEAGYPISVEEMGERFAG--MTWKNILLQ 57
Query: 116 IESWS--PDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV 173
+ES + P ++ + + ++I+ G L R + + + +
Sbjct: 58 VESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFA---LSRLTTPRCICSNSSSHRL 114
Query: 174 DLFHNRFGIT-------FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDD 226
D+ + G+ +S R KP P LH + + V P+ V++V DS+
Sbjct: 115 DMMLTKVGLKPYFAPHIYSAKDLGADRV-KPKPDIFLHGAAQFGVSPDRVVVVEDSVH-G 172
Query: 227 VACGKRAGAFTC-LLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
+ + AG + Y + ++ + +S + ++ +++ A
Sbjct: 173 IHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 221
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-06
Identities = 53/334 (15%), Positives = 103/334 (30%), Gaps = 109/334 (32%)
Query: 18 FL-SKYQNHHKFMPLFLSKSFLFLPTRPFSSISNFTSYMMSSFSPPKPKTRLRG------ 70
FL S + + P +++ ++ R ++ F Y +S +P +LR
Sbjct: 93 FLMSPIKTEQR-QPSMMTRMYIEQRDRLYNDNQVFAKYNVSR---LQPYLKLRQALLELR 148
Query: 71 -----VVFDMDG----TLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESW-- 119
++ + G + + V +V+ + I W
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLS-------------YKVQCKMDFKI-------FWLN 188
Query: 120 -----SPD-----LQRHAYQTIADFERQGLD-----RLQIMPGTAQLCGFLDSKKIRRGL 164
SP+ LQ+ YQ ++ D +L+I A+L L SK L
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWT-SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 165 -ITRNI--KEAVDLF----------HNRFGITFSPALSREFRPYKPDPGPL-----LHIC 206
+ N+ +A + F + F A + L +
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 207 STW---EVQ--PNEVM--------MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK 253
+ Q P EV+ ++ +S++D D + D T
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRD----------GLATWDNWKHVNCDKLTT 357
Query: 254 ------SNLQP-DFRVSSLTEVLSILEANFDLIP 280
+ L+P ++R + + LS+ + IP
Sbjct: 358 IIESSLNVLEPAEYR--KMFDRLSVFPPSAH-IP 388
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} Length = 284 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 5e-06
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 196 KPDP----GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADD- 250
KPD + E+ E++MVGD+L D+ G + G T L+ TG DD
Sbjct: 204 KPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALV-LTGNTRIDDA 262
Query: 251 ---FTKSNLQPDFRVSSL 265
+ + P S
Sbjct: 263 ETKIKSTGIVPTHICESA 280
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 41/239 (17%), Positives = 77/239 (32%), Gaps = 51/239 (21%)
Query: 68 LRGVVFDMDGTL--TVPV-------------IDFPAMYRAVLGEDEYKRVK-AENPTGID 111
L+ V+FD+DG + T I F D +R+K ++
Sbjct: 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFD--------RDMNERLKGISREESLE 53
Query: 112 ILHHIESWSPDLQRHAYQTIADFERQ-------GLDRLQIMPGTAQLCGFLDSKKIRRGL 164
+ Q + + + L ++PG +L L ++ I+ GL
Sbjct: 54 SILIFGGAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGL 113
Query: 165 IT--RNIK---EAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219
+ RN + + F P KPDP L + +V P + +
Sbjct: 114 ASSSRNAPKILRRLAIID-DFHAIVDPT---TLAKGKPDPDIFLTAAAMLDVSPADCAAI 169
Query: 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV-LSILEANFD 277
D+ ++ K AG F + + D V +++ L +L ++
Sbjct: 170 EDAEA-GISAIKSAGMFAVGVGQGQPML---------GADLVVRQTSDLTLELLHEEWE 218
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 9e-06
Identities = 7/49 (14%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
KP + + + ++GD D+ + G D
Sbjct: 116 KPKVKLVERYLAEQAMDRANSYVIGDRAT-DIQLAENMGINGLRYDRET 163
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* Length = 352 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 2e-05
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 196 KPDPGPLLHICSTWEVQP-NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKS 254
+ L + + P + V MVGD+ D+ + G +CL+ +TG Y+ D
Sbjct: 272 QSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLV-KTGVYNEGD-DLK 329
Query: 255 NLQPDFRVSSLTE-VLSILE 273
+P V+ + + V LE
Sbjct: 330 ECKPTLIVNDVFDAVTKTLE 349
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 2e-05
Identities = 31/234 (13%), Positives = 65/234 (27%), Gaps = 29/234 (12%)
Query: 56 MSSFSPPKPKTRLRGVVFDMDGTLT----VPVIDFPAMYRAVLG-------EDEYKRVKA 104
+ PK + D++GT+ V FP V + + +
Sbjct: 19 VLLARIPKMGDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILS 78
Query: 105 ENPT--GIDILHHIESWS---------PDLQ----RHAYQTIADFERQGLDRLQIMPGTA 149
+ + HI LQ H Y++ D + +
Sbjct: 79 QFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKK 138
Query: 150 QLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICS 207
++ + + L+ +++ H+ + K + +I
Sbjct: 139 RVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILR 198
Query: 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFR 261
+ +EV+ + D+ + A G T L G D K + +F
Sbjct: 199 DIGAKASEVLFLSDNPLELDAA-AGVGIATGLASRPGNAPVPDGQKYQVYKNFE 251
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 5e-05
Identities = 43/234 (18%), Positives = 74/234 (31%), Gaps = 30/234 (12%)
Query: 53 SYMMSSFSPPKPKTRLRGVVFDMDGTL--TVPV-----IDFPAMYRAVLGEDEYKRVKAE 105
Y S +PP+P + ++FDMDG L T + + Y D V +
Sbjct: 18 LYFQSMAAPPQP---VTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGK 74
Query: 106 NPTGIDILHHIESW-SPDLQRHAY-QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRG 163
+ I + + + ++ +MPG +L L I
Sbjct: 75 KAL--EAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFA 132
Query: 164 LITRNIKEAVDL-------FHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQP--N 214
L T + + D+ F + F KPDP L + P
Sbjct: 133 LATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG-KPDPDIFLACAKRFSPPPAME 191
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268
+ ++ D+ V AG ++ + S D TK ++SL +
Sbjct: 192 KCLVFEDAPN-GVEAALAAGMQVVMVPDG-NLSRDLTTK----ATLVLNSLQDF 239
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 7e-05
Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 36/236 (15%)
Query: 67 RLRGVVFDMDGTLTVPVID-----FPAMYRAV--LG----EDEYKRVK-AENPTGIDILH 114
+L+GV+FD+DG + D F A + +G + +K + +
Sbjct: 4 KLQGVIFDLDGVI----TDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRIL 59
Query: 115 HIESWSPDLQRHAYQTIADFER-------QGLDRLQIMPGTAQLCGFLDSKKIRRGLIT- 166
D +A + + L ++PG L L +++I GL +
Sbjct: 60 QHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASV 119
Query: 167 -RNIK---EAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222
N A++L F + + + KPDP L C+ V P + + D+
Sbjct: 120 SLNAPTILAALELRE-FFTFCADAS---QLKNSKPDPEIFLAACAGLGVPPQACIGIEDA 175
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDL 278
+ +G + + + + + L+ + N
Sbjct: 176 QA-GIDAINASGMRSVGIGAG--LTGAQLLLPSTE-SLTWPRLSAFWQNVAENLYF 227
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 33/198 (16%), Positives = 59/198 (29%), Gaps = 58/198 (29%)
Query: 58 SFSPPKPKTRLRG-VVFDMDGTL-TVPVIDFPAMY------------RAVLGEDEYK--- 100
+ P G +V DMD T + ID A RA+ GE +++
Sbjct: 96 ARIQDVPDLTKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSL 155
Query: 101 --RVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSK 158
RV IL + + L +MP +L L +
Sbjct: 156 RLRVSKLKDAPEQILSQV----------------------RETLPLMPELPELVATLHAF 193
Query: 159 KIRRGLITRNIKEAVDLFHNRFGITFSPA--LSRE-------------FRPYKPDPGPLL 203
+ + + D + + ++ + L K D LL
Sbjct: 194 GWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKAD--ILL 251
Query: 204 HICSTWEVQPNEVMMVGD 221
+ ++V+ + + VGD
Sbjct: 252 TLAQQYDVEIHNTVAVGD 269
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 49/224 (21%), Positives = 80/224 (35%), Gaps = 33/224 (14%)
Query: 68 LRGVVFDMDGTLTVPVID-----FPAMYRAV--LGEDEYKRVKAENPTGI---DILHHI- 116
+ V+FD+DG +T D F A +G + R E G+ D L I
Sbjct: 2 FKAVLFDLDGVIT----DTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKIL 57
Query: 117 ESWSPDLQRHAYQTIAD-----FER--QGLDRLQIMPGTAQLCGFLDSKKIRRGLIT--R 167
+ + ++ +A + + Q + + PG QL L S KI+ L + +
Sbjct: 58 DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK 117
Query: 168 NIK---EAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224
N E ++L F PA E KP P + V P+E + + DS
Sbjct: 118 NGPFLLERMNLTG-YFDAIADPA---EVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQA 173
Query: 225 DDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268
+ K +GA + D + + + L EV
Sbjct: 174 -GIQAIKDSGALPIGVGRPEDLGDDIVIVPDTS-HYTLEFLKEV 215
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 2e-04
Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 22/185 (11%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAV--LGEDEYKRVKAENPTGIDILHH------IESWS 120
R +VFD+ G L ++ R +G + + + L E +
Sbjct: 6 RNIVFDLGGVLIH--LNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFR 63
Query: 121 PDLQRHA--YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN 178
+L R+ T L L+ + R L++ +DL +
Sbjct: 64 TELSRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMS 123
Query: 179 RFGITFSPALSREFRPY---------KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVAC 229
+ L F KP+ L + + ++P E + + D +VA
Sbjct: 124 PRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDG-PANVAT 182
Query: 230 GKRAG 234
+R G
Sbjct: 183 AERLG 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 2e-04
Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 57/184 (30%)
Query: 71 VVFDMDGTL-TVPVIDFPAMY------------RAVLGEDEYK-----RVKAENPTGIDI 112
VFD D TL I+ A +A+ GE ++ RV + +
Sbjct: 7 AVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKL 66
Query: 113 LHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA 172
+ + L + G +L L K + + A
Sbjct: 67 AKEV----------------------CESLPLFEGALELVSALKEKNYKVVCFSGGFDLA 104
Query: 173 VDLFHNRFGITFSPALSREF---------------RPYKPDPGPLLHICSTWEVQPNEVM 217
+ + + + + + + K + LL + + +
Sbjct: 105 TNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGE--MLLVLQRLLNISKTNTL 162
Query: 218 MVGD 221
+VGD
Sbjct: 163 VVGD 166
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 39.9 bits (92), Expect = 2e-04
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 188 LSREFRPYKPDPGPLLHICSTWE 210
L + Y D P L I +T E
Sbjct: 25 LQASLKLYADDSAPALAIKATME 47
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 32/244 (13%), Positives = 64/244 (26%), Gaps = 74/244 (30%)
Query: 71 VVFDMDGTLT-VPVIDFPAMY-----------------RAVLGE---DE--YKRVKAENP 107
++FD D TL ++ + G+ + KR+ +P
Sbjct: 7 IIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRLAIASP 66
Query: 108 TGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITR 167
T I + P + G +L L +K + +
Sbjct: 67 TKQSIKEFSNKYCP--------------------NLLTDGIKELVQDLKNKGFEIWIFSG 106
Query: 168 NIKEAVDLFHNRFGITFSPALSREFRPYK------PDPGP------LLHICSTWEVQPNE 215
+ E++ F + I + E D L + E
Sbjct: 107 GLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGLIDGE 166
Query: 216 VMMVGDSLKDDVACGK-RAGAFTCLLDETGRYSADDFTKSNLQP------DFRVSSLTEV 268
V+ +GD D K A F + + + + ++ E+
Sbjct: 167 VIAIGDGYTDYQLYEKGYATKFIA------------YMEHIEREKVINLSKYVARNVAEL 214
Query: 269 LSIL 272
S++
Sbjct: 215 ASLI 218
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 38.7 bits (91), Expect = 8e-04
Identities = 27/188 (14%), Positives = 55/188 (29%), Gaps = 57/188 (30%)
Query: 67 RLRGVVFDMDGTL-TVPVIDFPAMY------------RAVLGEDEYK-----RVKAENPT 108
+ + ++FD D TL ID A A+ G+ ++ RV
Sbjct: 4 KKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDL 63
Query: 109 GIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRN 168
I+ + + R+ G + L ++ +++
Sbjct: 64 PIEKVEKA----------------------IKRITPTEGAEETIKELKNRGYVVAVVSGG 101
Query: 169 IKEAVDLFHNRFGITFSPA--LSRE-------------FRPYKPDPGPLLHICSTWEVQP 213
AV+ + G+ ++ A L + K + L I +
Sbjct: 102 FDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGE--ILEKIAKIEGINL 159
Query: 214 NEVMMVGD 221
+ + VGD
Sbjct: 160 EDTVAVGD 167
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 9e-04
Identities = 20/171 (11%), Positives = 44/171 (25%), Gaps = 40/171 (23%)
Query: 71 VVFDMDGTLTVPVIDFPAMY-------RAVLGEDEYK-----RVKAENPTGIDILHHIES 118
D++G L + A +Y R++ + G+ +
Sbjct: 5 ACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKL------ 58
Query: 119 WSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN 178
D+Q L+ + G + +L ++ + +++ E
Sbjct: 59 --GDIQEVI------------ATLKPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMR 103
Query: 179 RFGITFSPALSREFR-------PYKPDPGPLLHICSTWEVQPNEVMMVGDS 222
+ G E P ++ V+ GDS
Sbjct: 104 QLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDS 154
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 280 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.98 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.98 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.97 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.97 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.97 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.96 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.96 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.96 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.96 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.96 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.96 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.96 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.96 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.96 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.96 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.96 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.96 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.95 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.95 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.95 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.95 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.95 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.95 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.95 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.95 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.95 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.95 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.94 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.94 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.94 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.94 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.94 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.94 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.93 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.93 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.92 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.92 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.91 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.91 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.91 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.91 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.9 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.9 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.9 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.9 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.9 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.89 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.89 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.89 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.89 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.88 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.88 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.88 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.87 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.86 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.86 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.86 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.85 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.85 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.84 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.84 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.84 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.84 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.83 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.83 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.83 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.83 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.82 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.82 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.82 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.82 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.81 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.8 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.8 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.79 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.79 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.79 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.79 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.79 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.78 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.78 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.77 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.77 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.76 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.76 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.75 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.71 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.71 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.53 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.7 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.69 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.68 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.68 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.66 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.63 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.61 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.61 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.6 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.59 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.58 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.57 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.57 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.53 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.52 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.47 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.47 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.39 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.38 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.37 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.37 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.34 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.31 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.29 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.24 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.13 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.1 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.06 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.96 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.82 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.81 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.8 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.71 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.71 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.66 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.66 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.52 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.47 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.34 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.34 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.23 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.17 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.14 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.12 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.05 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 98.01 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.91 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.89 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.73 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.73 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.48 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.79 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.39 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.95 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 94.5 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.8 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 92.83 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 88.62 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 85.94 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 85.8 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 85.74 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 85.65 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 85.29 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 85.15 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 84.73 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 82.18 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 80.31 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=216.04 Aligned_cols=198 Identities=19% Similarity=0.250 Sum_probs=149.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHh-cCCChhhHHHHhhccChhHHHHHHHHHHHHHHh-cC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKA-ENPTGIDILHHIESWSPDLQRHAYQTIADFERQ-GL 139 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. ...++. .+.........+ +......+..+.+..+... ..
T Consensus 3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 80 (210)
T 2ah5_A 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC--LSKDQISEAVQIYRSYYKAKGI 80 (210)
T ss_dssp TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT--SCGGGHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH--cCHHHHHHHHHHHHHHHHHhcc
Confidence 4799999999999999886666555543 5543 222332 333333332222 3333344444444443332 23
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
....++||+.++|+.|++ |++++++||+....++..++.+|+. |+.+++++ +..||+|++|+.+++++|++|++|+
T Consensus 81 ~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~-~~~Kp~p~~~~~~~~~lg~~p~~~~ 158 (210)
T 2ah5_A 81 YEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS-PEAPHKADVIHQALQTHQLAPEQAI 158 (210)
T ss_dssp GSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC-SSCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC-CCCCCChHHHHHHHHHcCCCcccEE
Confidence 456789999999999999 9999999999998899999999998 89999888 8899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+|||+. +|+++|+++|+.+|++.++.. ...+.. ...+++++.++.|+.++|
T Consensus 159 ~vgDs~-~Di~~a~~aG~~~i~v~~~~~-~~~~l~--~~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 159 IIGDTK-FDMLGARETGIQKLAITWGFG-EQADLL--NYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp EEESSH-HHHHHHHHHTCEEEEESSSSS-CHHHHH--TTCCSEEESSTTHHHHHT
T ss_pred EECCCH-HHHHHHHHCCCcEEEEcCCCC-CHHHHH--hCCCCEEECCHHHHHHHh
Confidence 999999 999999999999999985221 111222 247999999999998764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-31 Score=214.41 Aligned_cols=204 Identities=21% Similarity=0.222 Sum_probs=149.3
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHH-HhcCCChhhHHHHhh-cc-ChhHHHHHHHH-HHHHHHhcC
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRV-KAENPTGIDILHHIE-SW-SPDLQRHAYQT-IADFERQGL 139 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~ 139 (280)
+|+|+||+||||+|+...+..++++++ |.+. .... ...+........... .. .....+..... ...+.....
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFS 80 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 589999999999999998887777765 5543 2222 223444444333221 11 11122222222 222223333
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++++.|+++|++++++||+....+...++.+|+. ||.+++++ .+.+||+|++|+.+++++|++|++|
T Consensus 81 ~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 160 (216)
T 3kbb_A 81 ELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160 (216)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred HhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccce
Confidence 44578999999999999999999999999999999999999998 99988865 8899999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEE-EcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCL-LDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~-v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+||||+. +|+++|+++||.+|+ +.+ +.....++.+ .+++.+ .+..|+.+.|++++
T Consensus 161 l~VgDs~-~Di~aA~~aG~~~i~~v~~-g~~~~~~l~~--~~~~~i-~~~~eli~~l~eLL 216 (216)
T 3kbb_A 161 VVFEDSK-SGVEAAKSAGIERIYGVVH-SLNDGKALLE--AGAVAL-VKPEEILNVLKEVL 216 (216)
T ss_dssp EEEECSH-HHHHHHHHTTCCCEEEECC-SSSCCHHHHH--TTCSEE-ECGGGHHHHHHHHC
T ss_pred EEEecCH-HHHHHHHHcCCcEEEEecC-CCCCHHHHHh--CCCcEE-CCHHHHHHHHHHHC
Confidence 9999999 999999999999986 543 2222223332 455554 47899999998863
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=210.77 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=158.1
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhcc--ChhHHHHHHHHHHHHH-H
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESW--SPDLQRHAYQTIADFE-R 136 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~ 136 (280)
.+++|+|+||+||||+|+...+..++.+.+ |... .......+.........+... ...........+...+ +
T Consensus 16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGA 95 (237)
T ss_dssp -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 356999999999999998876666665554 4222 222333555555555555433 2334444444443332 3
Q ss_pred hcC--CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCC
Q 023578 137 QGL--DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 137 ~~~--~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi 211 (280)
... ....++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+|+.+++++|+
T Consensus 96 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~ 175 (237)
T 4ex6_A 96 HVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGI 175 (237)
T ss_dssp HHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTC
T ss_pred hcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCC
Confidence 333 56789999999999999999999999999999999999999987 89888876 67899999999999999999
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 212 QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 212 ~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+|++|++|||+. +|+++|+++|+.+++|.++.. ...+.. ...+++++.++.||.++|++
T Consensus 176 ~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~g~~-~~~~~~--~~~ad~v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 176 PPERCVVIGDGV-PDAEMGRAAGMTVIGVSYGVS-GPDELM--RAGADTVVDSFPAAVTAVLD 234 (237)
T ss_dssp CGGGEEEEESSH-HHHHHHHHTTCEEEEESSSSS-CHHHHH--HTTCSEEESSHHHHHHHHHH
T ss_pred CHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCCC-CHHHHH--hcCCCEEECCHHHHHHHHHc
Confidence 999999999999 999999999999999986321 112222 25899999999999999876
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=207.45 Aligned_cols=192 Identities=31% Similarity=0.509 Sum_probs=155.5
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (280)
++|+|+||+||||+|+...+....++. |.+.. ......+..+..............+.........++|
T Consensus 5 ~~k~iifDlDGTL~d~~~~~~~~~~~~-g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVHDFAAIREAL-SIPAE----------DDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAP 73 (205)
T ss_dssp GCCEEEECTBTTTEEEEECHHHHHHHT-TCCTT----------SCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECT
T ss_pred cCCEEEEeCCCcCcccHHHHHHHHHHh-CCCch----------HHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 489999999999999988888777766 76642 1222233333433333333444444455556678999
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c--cceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F--SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f--d~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
|+.++++.|+++|++++++||+....++..++.+|+. | +.+++++.+.+||++.+++.+++++|++|++|++|||+
T Consensus 74 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~ 153 (205)
T 3m9l_A 74 GAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDY 153 (205)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred cHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCC
Confidence 9999999999999999999999999999999999997 7 77888888899999999999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
. +|+++|+++|+.+|++.++ ....+ ..+|+++.++.||+.+++.-.+
T Consensus 154 ~-~Di~~a~~aG~~~i~v~~~----~~~~~---~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 154 R-FDLDCGRAAGTRTVLVNLP----DNPWP---ELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp H-HHHHHHHHHTCEEEECSSS----SCSCG---GGCSEECSSHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHcCCEEEEEeCC----CCccc---ccCCEEeCCHHHHHHHHHhccc
Confidence 9 9999999999999999752 22333 4799999999999999987544
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=211.96 Aligned_cols=205 Identities=18% Similarity=0.229 Sum_probs=155.6
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhh----c--cChhHHHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIE----S--WSPDLQRHAYQTIADF 134 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~ 134 (280)
+++|+|+||+||||+|+...+..++.+.+ |.+. .......+.........+. . ...+........+..+
T Consensus 22 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (243)
T 3qxg_A 22 KKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSIL 101 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 45899999999999998876665555554 5554 2223334555444433321 1 2344444444444444
Q ss_pred HHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c--cceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 135 ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F--SPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 135 ~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f--d~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
.... ....++||+.++++.|+++|++++++||+....+...++. |+. | +.+++++ .+.+||+|.+|+.+++++
T Consensus 102 ~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~l 179 (243)
T 3qxg_A 102 FNSY-PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKG 179 (243)
T ss_dssp HHTS-SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHT
T ss_pred HHhc-ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHc
Confidence 3332 4567899999999999999999999999998888888888 887 8 8888866 778999999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|++|++|++|||+. +|+++|+++|+.+|++.++.. ...++. +..+++++.++.||.++|+++.
T Consensus 180 g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~~~~-~~~~l~--~~~ad~v~~s~~el~~~l~~li 242 (243)
T 3qxg_A 180 GLKADEAVVIENAP-LGVEAGHKAGIFTIAVNTGPL-DGQVLL--DAGADLLFPSMQTLCDSWDTIM 242 (243)
T ss_dssp TCCGGGEEEEECSH-HHHHHHHHTTCEEEEECCSSS-CHHHHH--HTTCSEEESCHHHHHHHHHHHT
T ss_pred CCCHHHeEEEeCCH-HHHHHHHHCCCEEEEEeCCCC-CHHHHH--hcCCCEEECCHHHHHHHHHhhh
Confidence 99999999999999 999999999999999985321 111222 2579999999999999998873
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=211.14 Aligned_cols=206 Identities=15% Similarity=0.134 Sum_probs=160.5
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch---HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHH-hcC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE---YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFER-QGL 139 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 139 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. .......+............+...........+..... ...
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYYNFDEETATVAIDYYRDYFKAKGM 82 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTGG
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCc
Confidence 4899999999999999876666666655 4443 22223345555555555555565555555444444332 233
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+++.+++++|++|++|
T Consensus 83 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 83 FENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp GSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred ccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 45689999999999999999999999999999999999999998 88888866 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
++|||+. +|+++|+++|+.+|+|.++ ++..+... +..+++++.++.||.+++....
T Consensus 163 i~iGD~~-~Di~~a~~aG~~~i~v~~g--~~~~~~~~-~~~ad~v~~s~~el~~~~~~~~ 218 (226)
T 3mc1_A 163 IMIGDRE-YDVIGALKNNLPSIGVTYG--FGSYEELK-NAGANYIVNSVDELHKKILELR 218 (226)
T ss_dssp EEEESSH-HHHHHHHTTTCCEEEESSS--SSCHHHHH-HHTCSEEESSHHHHHHHHHTC-
T ss_pred EEECCCH-HHHHHHHHCCCCEEEEccC--CCCHHHHH-HcCCCEEECCHHHHHHHHHHHh
Confidence 9999999 9999999999999999853 22222210 2589999999999999998654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=211.62 Aligned_cols=204 Identities=15% Similarity=0.158 Sum_probs=153.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCc--h-HHHH-HhcCCChhhHHHHhh----------------------
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GED--E-YKRV-KAENPTGIDILHHIE---------------------- 117 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~--~-~~~~-~~~~~~~~~~~~~~~---------------------- 117 (280)
++|+|+||+||||+|+...+..++.+++ |.+ . ...+ ...+.........+.
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 3799999999999999887776666554 664 2 2222 234444444443332
Q ss_pred -ccChhHHHHHHHHHHHHHH-hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceeeCC-CC
Q 023578 118 -SWSPDLQRHAYQTIADFER-QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALSRE-FR 193 (280)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~~-~~ 193 (280)
....+......+.+..++. .......++||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~ 162 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGI 162 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCC
Confidence 1122333344444444333 33456789999999999999999999999999998899999999886 88888865 77
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.+||+|++|..+++++|++|++|++|||+. +|+++|+++|+.+|++.++.. ...+.. ...+++++.++.|+.++|.
T Consensus 163 ~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~-~Di~~a~~aG~~~v~v~~~~~-~~~~~~--~~~a~~~~~~~~el~~~l~ 238 (240)
T 2hi0_A 163 RRKPAPDMTSECVKVLGVPRDKCVYIGDSE-IDIQTARNSEMDEIAVNWGFR-SVPFLQ--KHGATVIVDTAEKLEEAIL 238 (240)
T ss_dssp CCTTSSHHHHHHHHHHTCCGGGEEEEESSH-HHHHHHHHTTCEEEEESSSSS-CHHHHH--HTTCCCEECSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEECCCCC-chhHHH--hcCCCEEECCHHHHHHHhc
Confidence 899999999999999999999999999999 999999999999999985211 112222 2479999999999988875
Q ss_pred h
Q 023578 274 A 274 (280)
Q Consensus 274 ~ 274 (280)
.
T Consensus 239 ~ 239 (240)
T 2hi0_A 239 G 239 (240)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-30 Score=212.23 Aligned_cols=198 Identities=18% Similarity=0.258 Sum_probs=146.4
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCchH-HH-HHhcCCChhhHHHHhhc-------cChhHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEY-KR-VKAENPTGIDILHHIES-------WSPDLQRHAYQTIADF 134 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~-~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 134 (280)
|+|+|+||+||||+|+...+..++++++ |.+.. .. ....+.........+.. +.........+....+
T Consensus 25 MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNNY 104 (250)
T ss_dssp CCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred hhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHHH
Confidence 5899999999999999887777777765 54431 11 12233344444433321 2223333333333333
Q ss_pred HHhc---CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHh
Q 023578 135 ERQG---LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICST 208 (280)
Q Consensus 135 ~~~~---~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~ 208 (280)
+... .....++||+.++++.|+++|++++++|++.. ....++.+|+. |+.+++++ .+..||+|++|..++++
T Consensus 105 ~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~ 182 (250)
T 4gib_A 105 YVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKG 182 (250)
T ss_dssp HHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHH
T ss_pred HHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHH
Confidence 3222 23456899999999999999999998877643 56688999998 99998876 78899999999999999
Q ss_pred cCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH-HHHHHhcc
Q 023578 209 WEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV-LSILEANF 276 (280)
Q Consensus 209 lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl-~~~l~~~~ 276 (280)
+|++|++|+||||+. +|+++|+++|+.+|+|.+.. + ..+||++++++.|| .+.|.+.+
T Consensus 183 lg~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~-----~----~~~ad~vi~~l~eL~~~~i~~~~ 241 (250)
T 4gib_A 183 LNVNPQNCIGIEDAS-AGIDAINSANMFSVGVGNYE-----N----LKKANLVVDSTNQLKFEYIQEKY 241 (250)
T ss_dssp HTCCGGGEEEEESSH-HHHHHHHHTTCEEEEESCTT-----T----TTTSSEEESSGGGCCHHHHHHHH
T ss_pred hCCChHHeEEECCCH-HHHHHHHHcCCEEEEECChh-----H----hccCCEEECChHhCCHHHHHHHH
Confidence 999999999999999 99999999999999996311 1 13789999999998 56666543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-30 Score=207.61 Aligned_cols=207 Identities=17% Similarity=0.223 Sum_probs=160.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhc-----cChhHHHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIES-----WSPDLQRHAYQTIADFER 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 136 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. .......+.........+.. ............+...+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYE 84 (233)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 5899999999999998776655555544 5544 22223345555444444322 234444445554444444
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.......++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+|+.+++++|++|
T Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~ 164 (233)
T 3s6j_A 85 RLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPI 164 (233)
T ss_dssp HTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCG
T ss_pred HhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCH
Confidence 45566789999999999999999999999999999999999999988 88888866 7789999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
++|++|||+. +|+++|+++|+.+++|.++. ....+.. ..++++++.++.||.++|++...
T Consensus 165 ~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~-~~~~~l~--~~~ad~v~~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 165 DECLVIGDAI-WDMLAARRCKATGVGLLSGG-YDIGELE--RAGALRVYEDPLDLLNHLDEIAS 224 (233)
T ss_dssp GGEEEEESSH-HHHHHHHHTTCEEEEEGGGS-CCHHHHH--HTTCSEEESSHHHHHHTGGGTCC
T ss_pred HHEEEEeCCH-HhHHHHHHCCCEEEEEeCCC-CchHhHH--hcCCCEEECCHHHHHHHHHHHhh
Confidence 9999999999 99999999999999998532 2222333 25699999999999999987643
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=209.92 Aligned_cols=200 Identities=18% Similarity=0.245 Sum_probs=151.1
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHH-HHHh---CCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHH--hc
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMY-RAVL---GEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFER--QG 138 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~-~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 138 (280)
++++|+|+||+||||+|+...+...+ .+.+ |.+........+.........+.. .........+..+.. ..
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 98 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLG---KRWKEATILYENSLEKSQK 98 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCCTTSCTTTHHHHHHHHHG---GGHHHHHHHHHHHHHHCCS
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHHhC---chHHHHHHHHHHHHhhhcc
Confidence 34689999999999999886554444 4443 555422222233333333333222 222333333444333 34
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCC-
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPN- 214 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~- 214 (280)
.....+.||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++++|+.+++++|++|+
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 178 (231)
T 3kzx_A 99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSK 178 (231)
T ss_dssp CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCST
T ss_pred cccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCccc
Confidence 456789999999999999999999999999999999999999998 89888765 78899999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccCC
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDL 278 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~~ 278 (280)
++++|||+. +|+++|+++|+.+|++.+ +.. ..+++++.++.||.++|.+++++
T Consensus 179 ~~v~vGD~~-~Di~~a~~aG~~~v~~~~----~~~------~~~~~~~~~~~el~~~l~~~l~~ 231 (231)
T 3kzx_A 179 EVFFIGDSI-SDIQSAIEAGCLPIKYGS----TNI------IKDILSFKNFYDIRNFICQLINI 231 (231)
T ss_dssp TEEEEESSH-HHHHHHHHTTCEEEEECC---------------CCEEESSHHHHHHHHHHHHC-
T ss_pred CEEEEcCCH-HHHHHHHHCCCeEEEECC----CCC------CCCceeeCCHHHHHHHHHHHhcC
Confidence 999999999 999999999999999863 111 37889999999999999988764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=208.79 Aligned_cols=205 Identities=19% Similarity=0.241 Sum_probs=151.7
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhh----c--cChhHHHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIE----S--WSPDLQRHAYQTIADF 134 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~ 134 (280)
+++|+|+||+||||+|+...+..++.+.+ |.+. .......+.........+. . ...+...........+
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQAKTEE 100 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 35899999999999998876655555554 5554 2223334555444333321 1 1334444444443333
Q ss_pred HHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c--cceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 135 ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F--SPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 135 ~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f--d~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
.... ....++||+.++++.|+++|++++++||+....+...++. |+. | +.+++++ .+.+||+|.+|+.+++++
T Consensus 101 ~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~l 178 (247)
T 3dv9_A 101 FNKC-PKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKG 178 (247)
T ss_dssp HTTS-CCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHH
T ss_pred HHhc-ccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHc
Confidence 3222 4568899999999999999999999999998888888888 887 8 8888865 789999999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|++|++|++|||+. +|+++|+++|+.++++.++.. ...+.. +..+++++.++.||.++|+++.
T Consensus 179 g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~~~~-~~~~l~--~~~ad~v~~~~~el~~~l~~~~ 241 (247)
T 3dv9_A 179 GFKPNEALVIENAP-LGVQAGVAAGIFTIAVNTGPL-HDNVLL--NEGANLLFHSMPDFNKNWETLQ 241 (247)
T ss_dssp TCCGGGEEEEECSH-HHHHHHHHTTSEEEEECCSSS-CHHHHH--TTTCSEEESSHHHHHHHHHHHH
T ss_pred CCChhheEEEeCCH-HHHHHHHHCCCeEEEEcCCCC-CHHHHH--hcCCCEEECCHHHHHHHHHHHH
Confidence 99999999999999 999999999999999985321 111222 3589999999999999998764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-29 Score=203.15 Aligned_cols=200 Identities=21% Similarity=0.318 Sum_probs=151.4
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHH-HHhcCCChhhHHHHhhccChhHHHHHHHHHHHHH-HhcCC
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKR-VKAENPTGIDILHHIESWSPDLQRHAYQTIADFE-RQGLD 140 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 140 (280)
+|+|+||+||||+|+...+..++.+.+ |.+. ... ....+.........+.. ..........+..++ .....
T Consensus 3 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 80 (222)
T 2nyv_A 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLK--DKFREEYVEVFRKHYLENPVV 80 (222)
T ss_dssp ECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHG--GGCCTHHHHHHHHHHHHCSCS
T ss_pred CCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhC--hHHHHHHHHHHHHHHHHhccc
Confidence 799999999999999886665555544 6542 111 22234444444443322 111122233333333 33345
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||+|.+|..+++++|++|++|+
T Consensus 81 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 160 (222)
T 2nyv_A 81 YTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKAL 160 (222)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEE
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEE
Confidence 6789999999999999999999999999999999999999987 88888865 77899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+|||+. +|+.+|+++|+.++++.++. ...+. ..+++++.++.|+.++|.+..
T Consensus 161 ~vGD~~-~Di~~a~~aG~~~i~v~~g~--~~~~~----~~~~~~~~~~~el~~~l~~~~ 212 (222)
T 2nyv_A 161 IVGDTD-ADIEAGKRAGTKTALALWGY--VKLNS----QIPDFTLSRPSDLVKLMDNHI 212 (222)
T ss_dssp EEESSH-HHHHHHHHHTCEEEEETTSS--CSCCC----CCCSEEESSTTHHHHHHHTTS
T ss_pred EECCCH-HHHHHHHHCCCeEEEEcCCC--CCccc----cCCCEEECCHHHHHHHHHHhh
Confidence 999998 99999999999999998532 11111 479999999999999987654
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=209.29 Aligned_cols=201 Identities=16% Similarity=0.219 Sum_probs=139.6
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhcc-------ChhHHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESW-------SPDLQRHAYQTIAD 133 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 133 (280)
|++|+|+||+||||+|+...+..++++++ |.+. .......+....+....+... ..............
T Consensus 3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNL 82 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHHHH
T ss_pred ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Confidence 56999999999999999887777777665 5543 112222344444444443211 11222222111111
Q ss_pred -HHH--hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHH
Q 023578 134 -FER--QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICS 207 (280)
Q Consensus 134 -~~~--~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~ 207 (280)
+.. .......++||+.++++.|+++|++++++||+.. ....++.+|+. |+.+++++ .+.+||+|++|..+++
T Consensus 83 ~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~ 160 (243)
T 4g9b_A 83 LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNSKPDPEIFLAACA 160 (243)
T ss_dssp HHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHH
T ss_pred HHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHH
Confidence 111 1223446899999999999999999999999754 56678999998 89888865 8899999999999999
Q ss_pred hcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 208 ~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
++|++|++|++|||+. +|+++|+++||.+|+|.++.. +.+... ...+++++.++.++.+.+
T Consensus 161 ~lg~~p~e~l~VgDs~-~di~aA~~aG~~~I~V~~g~~-~ad~~~--~~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 161 GLGVPPQACIGIEDAQ-AGIDAINASGMRSVGIGAGLT-GAQLLL--PSTESLTWPRLSAFWQNV 221 (243)
T ss_dssp HHTSCGGGEEEEESSH-HHHHHHHHHTCEEEEESTTCC-SCSEEE--SSGGGCCHHHHHHHHHHH
T ss_pred HcCCChHHEEEEcCCH-HHHHHHHHcCCEEEEECCCCC-cHHHhc--CChhhcCHHHHHHHHHHH
Confidence 9999999999999999 999999999999999985321 111111 234555555555555444
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-29 Score=204.49 Aligned_cols=205 Identities=20% Similarity=0.302 Sum_probs=151.7
Q ss_pred CCCCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHH-hcCCChhhHHHHhh---------ccChhHHHHHH
Q 023578 64 PKTRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVK-AENPTGIDILHHIE---------SWSPDLQRHAY 128 (280)
Q Consensus 64 ~~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~ 128 (280)
...++|+|+||+||||+|+...+..++.+.+ |.+. ...+. ..+........... ...........
T Consensus 19 ~~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (243)
T 2hsz_A 19 GMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFK 98 (243)
T ss_dssp CCSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHH
Confidence 3456899999999999999877666665554 5542 22222 23333333332221 12233333333
Q ss_pred HHHHH-HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHH
Q 023578 129 QTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLH 204 (280)
Q Consensus 129 ~~~~~-~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~ 204 (280)
+.+.. +.........++||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||++.+|..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~ 178 (243)
T 2hsz_A 99 RQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 178 (243)
T ss_dssp HHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHH
Confidence 33322 33334456789999999999999999999999999999999999999987 88888866 6788999999999
Q ss_pred HHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 205 ICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 205 ~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+++++|++|++|++|||+. +|+.+|+++|+.++++.++..... +.. ...+++++.++.||.++|
T Consensus 179 ~~~~~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~-~~~--~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 179 LCGKFGLYPKQILFVGDSQ-NDIFAAHSAGCAVVGLTYGYNYNI-PIA--QSKPDWIFDDFADILKIT 242 (243)
T ss_dssp HHHHHTCCGGGEEEEESSH-HHHHHHHHHTCEEEEESSSCSTTC-CGG--GGCCSEEESSGGGGGGGT
T ss_pred HHHHhCcChhhEEEEcCCH-HHHHHHHHCCCeEEEEcCCCCchh-hhh--hCCCCEEECCHHHHHHHh
Confidence 9999999999999999999 999999999999999986322222 221 358999999999987654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=200.81 Aligned_cols=199 Identities=18% Similarity=0.188 Sum_probs=150.1
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhcc--ChhHHHHHHHHHHHHHHhcC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESW--SPDLQRHAYQTIADFERQGL 139 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 139 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. .......+.........+... .......+...+..+.....
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNP 83 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHSC
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHhh
Confidence 4899999999999998876666665554 4432 122222344444444444222 11222344444444444433
Q ss_pred C--CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCC
Q 023578 140 D--RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 140 ~--~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
. ...++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+++.+++++|++|+
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 163 (214)
T 3e58_A 84 LPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQAS 163 (214)
T ss_dssp CCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChH
Confidence 2 3478999999999999999999999999999999999999997 89888865 77899999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+|++|||+. +|+.+|+++|+.++++++++. . .. +..++++++++.||.++|
T Consensus 164 ~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~~-~--~~---~~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 164 RALIIEDSE-KGIAAGVAADVEVWAIRDNEF-G--MD---QSAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp GEEEEECSH-HHHHHHHHTTCEEEEECCSSS-C--CC---CTTSSEEESSGGGGGGGC
T ss_pred HeEEEeccH-hhHHHHHHCCCEEEEECCCCc-c--ch---hccHHHHHHHHHHHHhhC
Confidence 999999999 999999999999999985221 1 11 258999999999987653
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-29 Score=205.71 Aligned_cols=205 Identities=18% Similarity=0.158 Sum_probs=156.1
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HH-HHHhcCCChhhHHHHhh---c--cChhHHHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YK-RVKAENPTGIDILHHIE---S--WSPDLQRHAYQTIADF 134 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~-~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~ 134 (280)
+++|+|+||+||||+|+...+..++.+.+ |.+. .. .....+.........+. . ..........+.+.+.
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLETRFNAA 105 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999998876666665554 5553 12 22234455555544432 1 2223333333322222
Q ss_pred HHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccc-eeeCC-CC-CCCCChHHHHHHHHhc
Q 023578 135 ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSP-ALSRE-FR-PYKPDPGPLLHICSTW 209 (280)
Q Consensus 135 ~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~-v~~~~-~~-~~Kp~~~~~~~~~~~l 209 (280)
. ....++||+.++++.|+++|++++++||+....++..++.+|+. |+. +++++ .+ .+||++.+|+.+++++
T Consensus 106 ---~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~l 181 (259)
T 4eek_A 106 ---M-TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQL 181 (259)
T ss_dssp ---H-TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHT
T ss_pred ---h-ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHc
Confidence 2 66789999999999999999999999999999999999999998 898 88765 77 8999999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC-C--ccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY-S--ADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~-~--~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
|++|++|++|||+. +|+++|+++|+.++++++++.. . ..+.. ...+++++.++.||.++|+....
T Consensus 182 gi~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~--~~~ad~vi~~l~el~~~l~~~~~ 249 (259)
T 4eek_A 182 GILPERCVVIEDSV-TGGAAGLAAGATLWGLLVPGHPHPDGAAALS--RLGAARVLTSHAELRAALAEAGL 249 (259)
T ss_dssp TCCGGGEEEEESSH-HHHHHHHHHTCEEEEECCTTSCCSSCHHHHH--HHTCSEEECSHHHHHHHHHHTTS
T ss_pred CCCHHHEEEEcCCH-HHHHHHHHCCCEEEEEccCCCcccccHHHHH--hcCcchhhCCHHHHHHHHHhccc
Confidence 99999999999999 9999999999999999853221 0 11222 25799999999999999987654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=204.52 Aligned_cols=202 Identities=18% Similarity=0.190 Sum_probs=156.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHH-HHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIAD-FERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 140 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. .......+............+...........+.. +......
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFADKGIF 107 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTGGG
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhccc
Confidence 4799999999999998876666665554 5442 11222334444444444445555555555554444 3333445
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC-CCcE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ-PNEV 216 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~-~~~~ 216 (280)
...++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+++.+++++|++ |++|
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~ 187 (240)
T 3sd7_A 108 ENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKV 187 (240)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGE
T ss_pred ccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcE
Confidence 6789999999999999999999999999999999999999998 89888866 778999999999999999999 9999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
++|||+. +|+++|+++|+.++++.++.. ...+.. +..+++++.++.||.++|
T Consensus 188 i~vGD~~-~Di~~a~~aG~~~i~v~~g~~-~~~~~~--~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 188 IMVGDRK-YDIIGAKKIGIDSIGVLYGYG-SFEEIS--ESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEESSH-HHHHHHHHHTCEEEEESSSSC-CHHHHH--HHCCSEEESSSTTHHHHH
T ss_pred EEECCCH-HHHHHHHHCCCCEEEEeCCCC-CHHHHh--hcCCCEEECCHHHHHHHh
Confidence 9999999 999999999999999985321 111221 258999999999999886
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=205.97 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=151.3
Q ss_pred CCccEEEEeCCCcccCCCCCH-HHHHHHHh---CCch-HHHHHh-cCCChhhHHHHhh---------------ccChhHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDF-PAMYRAVL---GEDE-YKRVKA-ENPTGIDILHHIE---------------SWSPDLQ 124 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~-~~~~~~~~---g~~~-~~~~~~-~~~~~~~~~~~~~---------------~~~~~~~ 124 (280)
+++|+|+||+||||+|+...+ ...+.+.+ |.+. ....+. .+.........+. .+.....
T Consensus 12 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (277)
T 3iru_A 12 GPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDI 91 (277)
T ss_dssp CCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHHHH
T ss_pred ccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHHHH
Confidence 458999999999999987766 55555554 4443 222222 2222222222111 1223333
Q ss_pred HHHHHHHHH-HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCC-CCCCCCCh
Q 023578 125 RHAYQTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSRE-FRPYKPDP 199 (280)
Q Consensus 125 ~~~~~~~~~-~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~-~~~~Kp~~ 199 (280)
......+.. +.........++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~ 171 (277)
T 3iru_A 92 KRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFP 171 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSS
T ss_pred HHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCH
Confidence 333333332 22223345688999999999999999999999999999999999888765 67788765 77899999
Q ss_pred HHHHHHHHhcCCCC-CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC----------------------CccccccCCC
Q 023578 200 GPLLHICSTWEVQP-NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY----------------------SADDFTKSNL 256 (280)
Q Consensus 200 ~~~~~~~~~lgi~~-~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~----------------------~~~~~~~~~~ 256 (280)
.+|+.+++++|++| ++|++|||+. +|+++|+++|+.+++|.++... ...+.. ..
T Consensus 172 ~~~~~~~~~lgi~~~~~~i~vGD~~-~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~ 248 (277)
T 3iru_A 172 DMALKVALELEVGHVNGCIKVDDTL-PGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLF--NA 248 (277)
T ss_dssp HHHHHHHHHHTCSCGGGEEEEESSH-HHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH--HH
T ss_pred HHHHHHHHHcCCCCCccEEEEcCCH-HHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHh--hC
Confidence 99999999999999 9999999999 9999999999999999864321 111222 25
Q ss_pred CCCEEEcCHHHHHHHHHhcc
Q 023578 257 QPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 257 ~~d~v~~~~~dl~~~l~~~~ 276 (280)
+||++++++.||.++|+++.
T Consensus 249 ~ad~v~~~~~el~~~l~~~~ 268 (277)
T 3iru_A 249 GAHYVIDSVADLETVITDVN 268 (277)
T ss_dssp TCSEEESSGGGTHHHHHHHH
T ss_pred CCCEEecCHHHHHHHHHHHH
Confidence 79999999999999998753
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-29 Score=200.04 Aligned_cols=198 Identities=21% Similarity=0.297 Sum_probs=146.9
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDR 141 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (280)
++|+|+||+||||+|+...+...+.+.+ |.+. .......+.......+.+ .............+..........
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTEL-GIAASEFDHFQAQYEDVMASHYDQ 81 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHT-TCCGGGHHHHHHHHHHHHTTCGGG
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHHc-CCCHHHHHHHHHHHHHHHhhhccc
Confidence 4799999999999999887776666654 4432 222223444444444443 223222222222222211112355
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
..++||+.++++.|+++ ++++++||+....++..++.+|+. |+.+++++ .+..||++.+++.+++++|++|++|++
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~ 160 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF 160 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence 77899999999999999 999999999999999999999987 88888765 778999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|||+. +|+++|+++|+.+++++++. ...+.. +. +++++.++.|+.++|
T Consensus 161 vGD~~-~Di~~a~~aG~~~~~~~~~~--~~~~~~--~~-a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 161 IGDSV-SDEQTAQAANVDFGLAVWGM--DPNADH--QK-VAHRFQKPLDILELF 208 (209)
T ss_dssp EESSH-HHHHHHHHHTCEEEEEGGGC--CTTGGG--SC-CSEEESSGGGGGGGC
T ss_pred ECCCh-hhHHHHHHcCCeEEEEcCCC--CChhhh--cc-CCEEeCCHHHHHHhh
Confidence 99998 99999999999999998532 212222 23 999999999987654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=203.92 Aligned_cols=133 Identities=20% Similarity=0.276 Sum_probs=118.3
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
.....++|++.++++.|++. ++++++||+....++..++.+|+.|+.+++++ .+.+||++.+|+.+++++|++|++|+
T Consensus 116 ~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 194 (254)
T 3umc_A 116 WHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVM 194 (254)
T ss_dssp GGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred HhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChHHEE
Confidence 35567899999999999986 99999999999999999999999888888766 77899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccC--CCCCCEEEcCHHHHHHHHH
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKS--NLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~--~~~~d~v~~~~~dl~~~l~ 273 (280)
+|||+. +|+++|+++|+.++++++++.++.....+. +..||++++++.||.++|.
T Consensus 195 ~iGD~~-~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 195 LCAAHN-YDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp EEESCH-HHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred EEcCch-HhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence 999999 999999999999999997666665433333 5799999999999999885
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=205.98 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=150.8
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhh-ccC-hhHHHHHHHHHHHHHHh
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIE-SWS-PDLQRHAYQTIADFERQ 137 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 137 (280)
++++|+|+||+||||+|+...+..++.+.+ |.+. .......+.........+. .+. ..........+......
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 106 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 356899999999999998776665555554 5443 2222234444444444332 111 12223333444444444
Q ss_pred cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-cCCc--ccceeeCC---CCCCCCChHHHHHHHHhcCC
Q 023578 138 GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-FGIT--FSPALSRE---FRPYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 138 ~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~g~~--fd~v~~~~---~~~~Kp~~~~~~~~~~~lgi 211 (280)
......++||+.++++.|+++|++++++||+....+...+.. +|+. |+.+++++ .+.+||+|++|+.+++++|+
T Consensus 107 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi 186 (250)
T 3l5k_A 107 VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP 186 (250)
T ss_dssp HGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSS
T ss_pred HhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCC
Confidence 446678999999999999999999999999998777766644 4665 88888754 56899999999999999999
Q ss_pred CC--CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 212 QP--NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 212 ~~--~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
+| ++|++|||+. +|+++|+++|+.++++.++. ...+ .+..+|+++.++.||.+.|..+
T Consensus 187 ~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~--~~~~---~~~~ad~v~~sl~el~~~l~~l 246 (250)
T 3l5k_A 187 PPAMEKCLVFEDAP-NGVEAALAAGMQVVMVPDGN--LSRD---LTTKATLVLNSLQDFQPELFGL 246 (250)
T ss_dssp CCCGGGEEEEESSH-HHHHHHHHTTCEEEECCCTT--SCGG---GSTTSSEECSCGGGCCGGGGTC
T ss_pred CCCcceEEEEeCCH-HHHHHHHHcCCEEEEEcCCC--Cchh---hcccccEeecCHHHhhHHHhcC
Confidence 88 9999999999 99999999999999998632 2222 2469999999999998776554
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-29 Score=201.39 Aligned_cols=132 Identities=17% Similarity=0.213 Sum_probs=116.6
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+|+.+++++|++|++|
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 56788999999999999999999999999999999999999988 89888875 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
++|||+. +|+++|+++|+.++++++++. .. ...+..+++++.++.||.++|+++.
T Consensus 173 ~~iGD~~-~Di~~a~~aG~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~el~~~l~~~~ 227 (230)
T 3um9_A 173 LFVSCNS-WDATGAKYFGYPVCWINRSNG-VF---DQLGVVPDIVVSDVGVLASRFSPVD 227 (230)
T ss_dssp EEEESCH-HHHHHHHHHTCCEEEECTTSC-CC---CCSSCCCSEEESSHHHHHHTCCC--
T ss_pred EEEeCCH-HHHHHHHHCCCEEEEEeCCCC-cc---ccccCCCcEEeCCHHHHHHHHHHhh
Confidence 9999999 999999999999999986432 11 2224699999999999999887654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-28 Score=199.50 Aligned_cols=135 Identities=17% Similarity=0.229 Sum_probs=118.8
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
....++||+.++++.|+++ ++++++||+....++..++.+|+.|+.+++++ .+..||++.+|+.+++++|++|++|++
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~ 191 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVML 191 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 5567899999999999997 99999999999999999999999888888765 678999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccC--CCCCCEEEcCHHHHHHHHHhcc
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKS--NLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~--~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|||+. +|+++|+++|+.++++++++.++.....+. ...+|+++.|+.||.++|....
T Consensus 192 iGD~~-~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~~ 250 (254)
T 3umg_A 192 AAAHN-GDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAGS 250 (254)
T ss_dssp EESCH-HHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHCC
T ss_pred EeCCh-HhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCCC
Confidence 99999 999999999999999997655554322222 5799999999999999997653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-28 Score=196.06 Aligned_cols=207 Identities=17% Similarity=0.197 Sum_probs=146.1
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCchHH-HHHhcCCChhhHHHHhh--ccChhH-----HHHH-------
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEYK-RVKAENPTGIDILHHIE--SWSPDL-----QRHA------- 127 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~------- 127 (280)
+++|+|+||+||||+|+...+..++.+.+ |.+... ..+............+. .+.... ....
T Consensus 5 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYE 84 (238)
T ss_dssp CCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCC
Confidence 45899999999999998776666555544 544311 11100000000111100 000000 0000
Q ss_pred ---HHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHH
Q 023578 128 ---YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGP 201 (280)
Q Consensus 128 ---~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~ 201 (280)
......+.+.......++||+.++++.|+++ ++++++||+....++..++.+|+. |+.+++++ .+.+||+|.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~ 163 (238)
T 3ed5_A 85 ADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEY 163 (238)
T ss_dssp CCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHH
T ss_pred CcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHH
Confidence 0111223333334578999999999999999 999999999999999999999988 88888765 7889999999
Q ss_pred HHHHHHhcC-CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccCC
Q 023578 202 LLHICSTWE-VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDL 278 (280)
Q Consensus 202 ~~~~~~~lg-i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~~ 278 (280)
|+.+++++| ++|++|++|||+..+|+++|+++|+.+|+++++. .... .+..+++++.++.||.++|.+....
T Consensus 164 ~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~--~~~~---~~~~ad~v~~~~~el~~~l~~~~~~ 236 (238)
T 3ed5_A 164 FNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDM--KPNV---PEIIPTYEIRKLEELYHILNIENTV 236 (238)
T ss_dssp HHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTC--CCCT---TCCCCSEEESSGGGHHHHHTCCCC-
T ss_pred HHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCC--CCCc---ccCCCCeEECCHHHHHHHHHhhccC
Confidence 999999999 9999999999995489999999999999998531 1111 2468999999999999999876443
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-28 Score=196.51 Aligned_cols=201 Identities=15% Similarity=0.259 Sum_probs=147.1
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCchHHH----HHh-----------cCCChh---hHHHHhh---ccChh
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEYKR----VKA-----------ENPTGI---DILHHIE---SWSPD 122 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~~~----~~~-----------~~~~~~---~~~~~~~---~~~~~ 122 (280)
++|+|+||+||||+|+...+...+.+++ |.+.... +.. .+.... .....+. .+...
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDVE 82 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCHH
Confidence 3799999999999998776655555443 6554211 111 133333 2222221 12221
Q ss_pred HHHHHHHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCc---hHHHHHHHHHcCCc--ccceeeCC-CCCCC
Q 023578 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNI---KEAVDLFHNRFGIT--FSPALSRE-FRPYK 196 (280)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~---~~~~~~~l~~~g~~--fd~v~~~~-~~~~K 196 (280)
........+...... ..++|++.++++.|+++|++++++||+. ...++..++.+|+. |+.+++++ .+..|
T Consensus 83 ---~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k 158 (235)
T 2om6_A 83 ---LVKRATARAILNVDE-SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYK 158 (235)
T ss_dssp ---HHHHHHHHHHHHCCG-GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCT
T ss_pred ---HHHHHHHHHHHhccc-cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCC
Confidence 112222333333322 3469999999999999999999999999 88889999999988 88888754 77899
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|+|.+|..+++++|++|++|++|||+..+|+++|+++|+.++++++++ ...+.. ..+++++.++.|+.++|+++.
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~--~~~~~~---~~~~~~~~~~~el~~~l~~~~ 233 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEG--DKVRKL---EERGFEIPSIANLKDVIELIS 233 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTC--CSCEEE---ETTEEEESSGGGHHHHHHHTC
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCC--CCcccC---CCCcchHhhHHHHHHHHHHHh
Confidence 999999999999999999999999997579999999999999998642 222222 368999999999999998875
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=202.57 Aligned_cols=208 Identities=22% Similarity=0.242 Sum_probs=145.8
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHh-------CCchH-HH-----HH-hcC-------CChhhHH-----HHhhc
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVL-------GEDEY-KR-----VK-AEN-------PTGIDIL-----HHIES 118 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~-------g~~~~-~~-----~~-~~~-------~~~~~~~-----~~~~~ 118 (280)
..++|+|+||+||||+|+...+..++++++ |.+.. .. .. ..+ ....... ..+..
T Consensus 15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (260)
T 2gfh_A 15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 94 (260)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred cccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Confidence 346899999999999999887777666542 33321 00 00 001 1111100 01100
Q ss_pred c--ChhHHHHHHHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CC
Q 023578 119 W--SPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FR 193 (280)
Q Consensus 119 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~ 193 (280)
. ..............+.........++||+.++|+.|++ +++++|+||+....++..++.+|+. |+.+++++ .+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~ 173 (260)
T 2gfh_A 95 TKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK 173 (260)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS
T ss_pred hcCccchHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC
Confidence 0 00011111122222222222456789999999999998 5999999999999999999999998 89887765 77
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCC-cEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGA-FTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~-~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
.+||+|++|+.+++++|++|++|++|||+ . +|+++|+++|+ .++++.+.+ . ........+++++.++.||.++
T Consensus 174 ~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~-~Di~~A~~aG~~~~i~v~~~~--~--~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 174 EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLE-TDIQGGLNAGLKATVWINKSG--R--VPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp SCTTCHHHHHHHHHHHTCCGGGEEEEESCTT-THHHHHHHTTCSEEEEECTTC--C--CCSSCCCCCSEEESSGGGHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhEEEECCCch-hhHHHHHHCCCceEEEEcCCC--C--CcCcccCCCCEEECCHHHHHHH
Confidence 89999999999999999999999999996 8 99999999999 799997421 1 1111135899999999999999
Q ss_pred HHhccCC
Q 023578 272 LEANFDL 278 (280)
Q Consensus 272 l~~~~~~ 278 (280)
|.++..-
T Consensus 249 l~~~~~~ 255 (260)
T 2gfh_A 249 LQSIDCK 255 (260)
T ss_dssp HHHHTTC
T ss_pred HHHHhhC
Confidence 9887543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=197.25 Aligned_cols=131 Identities=16% Similarity=0.279 Sum_probs=116.1
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||+|.+|+.+++++|++|++|+
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL 176 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence 5688999999999999999999999999999999999999987 89888866 78899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+|||+. +|+.+|+++|+.++++.+++. ...+ .+..+++++.++.||.++|++..
T Consensus 177 ~vGD~~-~Di~~a~~~G~~~~~v~~~~~-~~~~---~~~~~~~v~~~~~el~~~l~~~~ 230 (233)
T 3umb_A 177 FVSSNG-WDACGATWHGFTTFWINRLGH-PPEA---LDVAPAAAGHDMRDLLQFVQARQ 230 (233)
T ss_dssp EEESCH-HHHHHHHHHTCEEEEECTTCC-CCCS---SSCCCSEEESSHHHHHHHHHC--
T ss_pred EEeCCH-HHHHHHHHcCCEEEEEcCCCC-Cchh---ccCCCCEEECCHHHHHHHHHHhh
Confidence 999998 999999999999999986433 2222 24689999999999999998653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=196.38 Aligned_cols=130 Identities=24% Similarity=0.371 Sum_probs=114.2
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||+|.+|+.+++++|++|++|+
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 182 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 4678999999999999999999999999999999999999988 88888865 77899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCC-CEEEcCHHHHHHHHHhcc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQP-DFRVSSLTEVLSILEANF 276 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~-d~v~~~~~dl~~~l~~~~ 276 (280)
+|||+. +|+++|+++|+.++++.+++. ... ....+ ++++.++.||.++|.++.
T Consensus 183 ~iGD~~-~Di~~a~~aG~~~~~v~~~~~--~~~---~~~~~~~~~~~~~~el~~~l~~~~ 236 (240)
T 2no4_A 183 FVSSNA-WDLGGAGKFGFNTVRINRQGN--PPE---YEFAPLKHQVNSLSELWPLLAKNV 236 (240)
T ss_dssp EEESCH-HHHHHHHHHTCEEEEECTTCC--CCC---CTTSCCSEEESSGGGHHHHHCC--
T ss_pred EEeCCH-HHHHHHHHCCCEEEEECCCCC--CCc---ccCCCCceeeCCHHHHHHHHHHhh
Confidence 999999 999999999999999986322 111 13578 999999999999987653
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-27 Score=192.81 Aligned_cols=207 Identities=21% Similarity=0.219 Sum_probs=147.9
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--H-HHHHhcCCChhhHHHHhhcc-ChhHHHHHHHHHHH-HHHhc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--Y-KRVKAENPTGIDILHHIESW-SPDLQRHAYQTIAD-FERQG 138 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 138 (280)
++|+|+||+||||+|+...+...+.+.+ |.+. . ......+.........+... ...........+.. +....
T Consensus 5 ~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGITDADQLESFRQEYSKEADIYM 84 (225)
T ss_dssp CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4799999999999998765555555543 5443 1 22223444444444444332 22223333333322 33333
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....+.|++.++++.++++|++++++||+....++..++.+|+. |+.+++++ .+..||++.++..+++++|+++++
T Consensus 85 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 164 (225)
T 3d6j_A 85 NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEE 164 (225)
T ss_dssp GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGG
T ss_pred cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHH
Confidence 345678999999999999999999999999999999999999987 78887765 678899999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
+++|||+. +|++|++.+|+.++++.++++ ...+.. ...+++++.++.|+.++|++++.
T Consensus 165 ~i~iGD~~-nDi~~~~~aG~~~~~~~~~~~-~~~~l~--~~~ad~v~~~~~el~~~l~~~~~ 222 (225)
T 3d6j_A 165 VLYIGDST-VDAGTAAAAGVSFTGVTSGMT-TAQEFQ--AYPYDRIISTLGQLISVPEDKSG 222 (225)
T ss_dssp EEEEESSH-HHHHHHHHHTCEEEEETTSSC-CTTGGG--GSCCSEEESSGGGGC--------
T ss_pred eEEEcCCH-HHHHHHHHCCCeEEEECCCCC-ChHHHh--hcCCCEEECCHHHHHHhhhhhcC
Confidence 99999999 999999999999999986432 222332 24599999999999999987764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=195.32 Aligned_cols=133 Identities=21% Similarity=0.333 Sum_probs=116.0
Q ss_pred HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcC
Q 023578 134 FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 134 ~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lg 210 (280)
+.........++||+.++++.|+ +|++++++||+....++..++.+|+. |+.+++++ .+.+||++.+|+.+++++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg 176 (240)
T 3qnm_A 98 FFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQ 176 (240)
T ss_dssp HHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTT
T ss_pred HHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcC
Confidence 44444456789999999999999 99999999999999999999999987 88888865 7889999999999999999
Q ss_pred CCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 211 VQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 211 i~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
++|++|++|||+ . +|+++|+++|+.+++++++.. . .....||++++|+.|+.++.+.
T Consensus 177 i~~~~~~~iGD~~~-~Di~~a~~aG~~~~~~~~~~~----~--~~~~~~d~vi~sl~e~~~~~~~ 234 (240)
T 3qnm_A 177 SELRESLMIGDSWE-ADITGAHGVGMHQAFYNVTER----T--VFPFQPTYHIHSLKELMNLLEG 234 (240)
T ss_dssp CCGGGEEEEESCTT-TTHHHHHHTTCEEEEECCSCC----C--CCSSCCSEEESSTHHHHHHTC-
T ss_pred CCcccEEEECCCch-HhHHHHHHcCCeEEEEcCCCC----C--CcCCCCceEECCHHHHHHHHhc
Confidence 999999999999 6 999999999999999986332 1 1246899999999999988653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-28 Score=195.82 Aligned_cols=132 Identities=20% Similarity=0.313 Sum_probs=113.4
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||+|.+|+.+++++|++|++|
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 92 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 35678999999999999999999999999999999999999988 88888865 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
++|||+. +|+.+|+++|+.++++++++. .. ...+..+++++.++.|+.++|.+..
T Consensus 172 ~~iGD~~-~Di~~a~~aG~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~el~~~l~~~~ 226 (232)
T 1zrn_A 172 LFVASNA-WDATGARYFGFPTCWINRTGN-VF---EEMGQTPDWEVTSLRAVVELFETAA 226 (232)
T ss_dssp EEEESCH-HHHHHHHHHTCCEEEECTTCC-CC---CSSSCCCSEEESSHHHHHTTC----
T ss_pred EEEeCCH-HHHHHHHHcCCEEEEEcCCCC-Cc---cccCCCCCEEECCHHHHHHHHHhhc
Confidence 9999999 999999999999999986332 11 1123589999999999998876653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=195.58 Aligned_cols=205 Identities=17% Similarity=0.176 Sum_probs=144.1
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhC------Cch--HHHHHhc-------CCChhhHHHH-hhcc---Ch-hHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLG------EDE--YKRVKAE-------NPTGIDILHH-IESW---SP-DLQRHA 127 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g------~~~--~~~~~~~-------~~~~~~~~~~-~~~~---~~-~~~~~~ 127 (280)
+|+|+||+||||+|+...+..++.+++. ... ....... .......... +..+ .. ....
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 79 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWIS-- 79 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHH--
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHH--
Confidence 6899999999999988766666555531 111 1110000 0000111111 1111 11 1111
Q ss_pred HHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHH
Q 023578 128 YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLH 204 (280)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~ 204 (280)
.....+.+.......++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+.+||+|.+|+.
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~ 158 (241)
T 2hoq_A 80 -AGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKK 158 (241)
T ss_dssp -HHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHH
T ss_pred -HHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHH
Confidence 1222222222234568999999999999999999999999999999999999998 88888865 7789999999999
Q ss_pred HHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 205 ICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 205 ~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
+++++|++|++|++|||+..+|+++|+++|+.++++.++ +...........+++++.++.||.++|.++..
T Consensus 159 ~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g--~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~~ 229 (241)
T 2hoq_A 159 ALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG--KHSERELEYRKYADYEIDNLESLLEVLARESS 229 (241)
T ss_dssp HHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS--CCCHHHHTTGGGCSEEESSTTHHHHHHHHCCS
T ss_pred HHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC--CCCcccccccCCCCEEECCHHHHHHHHHHHhh
Confidence 999999999999999999648999999999999999642 22111110123789999999999999987653
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=199.75 Aligned_cols=137 Identities=16% Similarity=0.323 Sum_probs=114.4
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHH---HHhcCCCCC
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHI---CSTWEVQPN 214 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~---~~~lgi~~~ 214 (280)
.....++||+.++++.|++ |++++++||+....++..++.++..|+.+++++ .+..||+|.+|..+ ++++|++|+
T Consensus 95 ~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~ 173 (240)
T 3smv_A 95 VKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173 (240)
T ss_dssp GGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred HhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence 3556899999999999999 799999999999988888888775599988865 88899999999999 899999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCC---CCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDET---GRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~---~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+|++|||+..+|+++|+++|+.+++++++ .+|+..........+|+++.++.||.++|.+++
T Consensus 174 ~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 174 DILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp GEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHHHHH
T ss_pred hEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHHHHh
Confidence 99999999339999999999999999965 223333222234799999999999999998764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-28 Score=197.15 Aligned_cols=190 Identities=18% Similarity=0.273 Sum_probs=134.1
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-H-HHHHhcCCChhhHHHHhh-------ccChhHHHHHHHHHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-Y-KRVKAENPTGIDILHHIE-------SWSPDLQRHAYQTIADFE 135 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 135 (280)
+|+|+||+||||+|+...+..++.+++ |.+. . ......+.........+. .+...........+..++
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRDY 81 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 699999999999998776655555544 5553 2 222334455444444432 234444444444444433
Q ss_pred HhcC---CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 136 RQGL---DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 136 ~~~~---~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
.... ....++||+.++++.|+++|++++++||+.. ++..++.+|+. |+.+++++ .+.+||+|.+|+.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l 159 (233)
T 3nas_A 82 QMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAML 159 (233)
T ss_dssp HHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHH
T ss_pred HHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHc
Confidence 3322 2234899999999999999999999999855 78889999987 89888866 778999999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
|++|++|++|||+. +|+++|+++|+.+++++.. .+. ..+++++.++.|+.
T Consensus 160 gi~~~~~i~vGDs~-~Di~~a~~aG~~~~~~~~~-----~~~----~~ad~v~~s~~el~ 209 (233)
T 3nas_A 160 DVSPADCAAIEDAE-AGISAIKSAGMFAVGVGQG-----QPM----LGADLVVRQTSDLT 209 (233)
T ss_dssp TSCGGGEEEEECSH-HHHHHHHHTTCEEEECC----------------CSEECSSGGGCC
T ss_pred CCCHHHEEEEeCCH-HHHHHHHHcCCEEEEECCc-----ccc----ccCCEEeCChHhCC
Confidence 99999999999999 9999999999999998631 111 28999999999864
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=198.12 Aligned_cols=207 Identities=14% Similarity=0.128 Sum_probs=147.6
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHH-H------------------hcCCChhhHHHH-----hhcc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRV-K------------------AENPTGIDILHH-----IESW 119 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~-~------------------~~~~~~~~~~~~-----~~~~ 119 (280)
+|+|+||+||||+|+...+..++.+.+ |.+. ...+ . ..+......... +...
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 489999999999998887766666655 5432 1111 0 012222221111 1111
Q ss_pred ChhHHHHHHHHHHHHHHhcCC--CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCC
Q 023578 120 SPDLQRHAYQTIADFERQGLD--RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRP 194 (280)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~--~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~ 194 (280)
.......+......+...+.. ...++||+.++|+.|+++|++++++||+... ++..++.+|+. |+.+++++ .+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~ 159 (263)
T 3k1z_A 81 GVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGW 159 (263)
T ss_dssp TCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSS
T ss_pred CCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCC
Confidence 111222223333334343332 3579999999999999999999999998764 68889999997 89888865 778
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+||+|.+|+.+++++|++|++|++|||+..+|+++|+++|+.+++++++......... ...+++++.++.||.++|++
T Consensus 160 ~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~--~~~ad~v~~~l~el~~~l~~ 237 (263)
T 3k1z_A 160 PKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRD--SVPKEHILPSLAHLLPALDC 237 (263)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHH--HSCGGGEESSGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcc--cCCCceEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999439999999999999999864321111111 24899999999999999987
Q ss_pred ccC
Q 023578 275 NFD 277 (280)
Q Consensus 275 ~~~ 277 (280)
+.+
T Consensus 238 ~~~ 240 (263)
T 3k1z_A 238 LEG 240 (263)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-27 Score=191.10 Aligned_cols=197 Identities=16% Similarity=0.160 Sum_probs=142.5
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh------CCch--HHH--------HHhcCCChhhH----HHHhh-----ccChh
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL------GEDE--YKR--------VKAENPTGIDI----LHHIE-----SWSPD 122 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~------g~~~--~~~--------~~~~~~~~~~~----~~~~~-----~~~~~ 122 (280)
+|+|+||+||||+|+...+...++++. |... ... ....+...... ..... ....+
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAAD 87 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCHH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCHH
Confidence 899999999999998876666544332 2111 000 11122222221 11111 11222
Q ss_pred HHHHHHHHHHHHHHhcCCCcccCcCHHHHHHHhhhCC-CeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCCh
Q 023578 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKK-IRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDP 199 (280)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g-~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~ 199 (280)
... .....+.+.......++||+.++++.|+++| ++++++||+....++..++.+|+. |+.+++. .||++
T Consensus 88 ~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~----~kpk~ 160 (234)
T 3ddh_A 88 IIR---QIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM----SDKTE 160 (234)
T ss_dssp HHH---HHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE----SCCSH
T ss_pred HHH---HHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec----CCCCH
Confidence 222 2233344445566789999999999999999 999999999999999999999987 7877753 58999
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
.+++.+++++|++|++|++|||+ . +|+++|+++|+.++++.++..|+..........++++++|+.||.++|
T Consensus 161 ~~~~~~~~~lgi~~~~~i~iGD~~~-~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 161 KEYLRLLSILQIAPSELLMVGNSFK-SDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCC-CCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHHHHHHHHhCCCcceEEEECCCcH-HHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 99999999999999999999999 6 999999999999999977655655433332456699999999999875
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=194.48 Aligned_cols=208 Identities=16% Similarity=0.198 Sum_probs=149.7
Q ss_pred CccEEEEeCCCcccCCCC-CHHHHHHHHh---CCch-HHHHH-hcCCChhhHHHHhh-------------c--cChhHHH
Q 023578 67 RLRGVVFDMDGTLTVPVI-DFPAMYRAVL---GEDE-YKRVK-AENPTGIDILHHIE-------------S--WSPDLQR 125 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~-~~~~~~~~~~---g~~~-~~~~~-~~~~~~~~~~~~~~-------------~--~~~~~~~ 125 (280)
++|+|+||+||||+|+.. .+...+.+.+ |.+. ....+ ..+.........+. . .......
T Consensus 5 ~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ 84 (267)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred CceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHHH
Confidence 489999999999999877 5566665554 5443 22222 23333332222211 1 1222233
Q ss_pred HHHHHHHH-HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c-cceeeCC-CCCCCCChH
Q 023578 126 HAYQTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F-SPALSRE-FRPYKPDPG 200 (280)
Q Consensus 126 ~~~~~~~~-~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f-d~v~~~~-~~~~Kp~~~ 200 (280)
.....+.. +.........++||+.++++.|+++|++++++||+....++..++.+|+. | +.+++++ ...+||++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~ 164 (267)
T 1swv_A 85 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164 (267)
T ss_dssp HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSH
T ss_pred HHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHH
Confidence 33333322 22333455678999999999999999999999999988888888888765 4 7777765 678999999
Q ss_pred HHHHHHHhcCCCC-CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCC----------------------ccccccCCCC
Q 023578 201 PLLHICSTWEVQP-NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYS----------------------ADDFTKSNLQ 257 (280)
Q Consensus 201 ~~~~~~~~lgi~~-~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~----------------------~~~~~~~~~~ 257 (280)
++..+++++|+++ ++|++|||+. +|++||+++|+.++++.++.... ..+.. ...
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~-nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 241 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFV--ENG 241 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSH-HHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH--HTT
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCH-HHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHH--hcC
Confidence 9999999999999 9999999999 99999999999999998643210 11122 247
Q ss_pred CCEEEcCHHHHHHHHHhccC
Q 023578 258 PDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 258 ~d~v~~~~~dl~~~l~~~~~ 277 (280)
||+++.++.||.++|.++.+
T Consensus 242 ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 242 AHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp CSEEESSGGGHHHHHHHHTC
T ss_pred CceeccCHHHHHHHHHHHhh
Confidence 99999999999999987643
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=194.03 Aligned_cols=207 Identities=16% Similarity=0.190 Sum_probs=148.4
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHH----hCCchH-HHHHhcCCChhhHHHH-hhccCh------hHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAV----LGEDEY-KRVKAENPTGIDILHH-IESWSP------DLQRHAYQTIADF 134 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~----~g~~~~-~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~ 134 (280)
++|+|+||+||||+|+...+..++.+. +|.+.. ......+......... +..+.. .........+..+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL 82 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHHH
Confidence 479999999999999988666655554 254432 1222344444443333 222211 1122333333332
Q ss_pred HH-hcC-CCcccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CC-CCCCChHHHHHHHH
Q 023578 135 ER-QGL-DRLQIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FR-PYKPDPGPLLHICS 207 (280)
Q Consensus 135 ~~-~~~-~~~~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~-~~Kp~~~~~~~~~~ 207 (280)
.. ... ....++||+.++|+.|+++ |++++++||+....++..++.+|+. |+.+++++ .. ..||++..++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~ 162 (234)
T 2hcf_A 83 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARR 162 (234)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHH
T ss_pred HHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHH
Confidence 22 222 4567899999999999999 9999999999999999999999988 78766655 32 45678899999999
Q ss_pred hcC--CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 208 TWE--VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 208 ~lg--i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
++| ++|++|++|||+. +|+++|+++|+.++++.++.. ...+.. ...+++++.++.||.++|+++..
T Consensus 163 ~lg~~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~-~~~~~~--~~~a~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 163 MTGANYSPSQIVIIGDTE-HDIRCARELDARSIAVATGNF-TMEELA--RHKPGTLFKNFAETDEVLASILT 230 (234)
T ss_dssp HHCCCCCGGGEEEEESSH-HHHHHHHTTTCEEEEECCSSS-CHHHHH--TTCCSEEESCSCCHHHHHHHHHC
T ss_pred HhCCCCCcccEEEECCCH-HHHHHHHHCCCcEEEEcCCCC-CHHHHH--hCCCCEEeCCHHhHHHHHHHHhc
Confidence 999 9999999999999 999999999999999985321 111221 24699999999999999987653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=191.36 Aligned_cols=135 Identities=21% Similarity=0.296 Sum_probs=114.4
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++++.|+ |++++++||+....++..++.+|+. |+.+++++ .+.+||+|.+|+.+++++|++|++|
T Consensus 90 ~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 167 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (253)
T ss_dssp GSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred hcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 45678999999999999 8999999999999999999999988 88888865 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCC----------CC---------CccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETG----------RY---------SADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~----------~~---------~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
++|||+. +|+++|+++|+.++++++.. ++ +.......+..+++++.++.|+.++|.++..
T Consensus 168 ~~vGD~~-~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 246 (253)
T 1qq5_A 168 LFVSSNG-FDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMAG 246 (253)
T ss_dssp EEEESCH-HHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC-
T ss_pred EEEeCCh-hhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHHHHhcc
Confidence 9999999 99999999999999998400 00 1111122246899999999999999987754
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-27 Score=188.46 Aligned_cols=189 Identities=20% Similarity=0.254 Sum_probs=139.5
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCc---hHHHHHhcCCChhhHHHHhhc-----cChhHHHHHHHHHHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GED---EYKRVKAENPTGIDILHHIES-----WSPDLQRHAYQTIADFER 136 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 136 (280)
+|+|+||+||||+|+...+...+.+.+ |.+ ........+.........+.. +..............++.
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYV 81 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHH
Confidence 699999999999998776655554443 665 222222344444444333321 333444444444333332
Q ss_pred hcC---CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcC
Q 023578 137 QGL---DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 137 ~~~---~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lg 210 (280)
... ....++||+.++++.|+++|++++++||. ...+..++.+|+. |+.+++++ .+..||+|.+++.+++++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lg 159 (221)
T 2wf7_A 82 KMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVG 159 (221)
T ss_dssp HHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTT
T ss_pred HHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcC
Confidence 222 24578999999999999999999999998 4467788889987 88887765 7789999999999999999
Q ss_pred CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
++|++|++|||+. +|++||+++|+.+++++. ..+. + .+++++.++.|+
T Consensus 160 i~~~~~i~iGD~~-nDi~~a~~aG~~~~~~~~-----~~~~---~-~a~~v~~~~~el 207 (221)
T 2wf7_A 160 VAPSESIGLEDSQ-AGIQAIKDSGALPIGVGR-----PEDL---G-DDIVIVPDTSHY 207 (221)
T ss_dssp CCGGGEEEEESSH-HHHHHHHHHTCEEEEESC-----HHHH---C-SSSEEESSGGGC
T ss_pred CChhHeEEEeCCH-HHHHHHHHCCCEEEEECC-----HHHh---c-cccchhcCHHhC
Confidence 9999999999999 999999999999999862 1122 3 799999999985
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-26 Score=189.29 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=143.5
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh------CCch---H------HHH---HhcCCChhhHHHHhhc-----cChh-
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL------GEDE---Y------KRV---KAENPTGIDILHHIES-----WSPD- 122 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~------g~~~---~------~~~---~~~~~~~~~~~~~~~~-----~~~~- 122 (280)
++|+|+||+||||+|+...+..++.+++ |.+. . ... ...+.........+.. ....
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 91 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEARI 91 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTCC
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999887777666543 3332 0 001 1345544443333211 1100
Q ss_pred HHHHHHHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChH
Q 023578 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPG 200 (280)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~ 200 (280)
...........+.+.......++||+.++++.|+ +|++++++||+....++..++.+|+. |+.+++. .||+|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~----~kp~~~ 166 (251)
T 2pke_A 92 EARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV----SEKDPQ 166 (251)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE----SCCSHH
T ss_pred ChHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee----CCCCHH
Confidence 0111112222233334456788999999999999 99999999999999899999999987 7877663 589999
Q ss_pred HHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccc-cCCCCCCE-EEcCHHHHHHHHHhc
Q 023578 201 PLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT-KSNLQPDF-RVSSLTEVLSILEAN 275 (280)
Q Consensus 201 ~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~-~~~~~~d~-v~~~~~dl~~~l~~~ 275 (280)
++..+++++|++|++|++|||+..+|+++|+++|+.++++.++..++..... .....+++ +++++.||.++|+++
T Consensus 167 ~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 243 (251)
T 2pke_A 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRAL 243 (251)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHHHh
Confidence 9999999999999999999999669999999999999999764433321111 01357898 999999999998765
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-27 Score=186.79 Aligned_cols=193 Identities=17% Similarity=0.240 Sum_probs=141.0
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcC-CChhhHHHHhh-ccChhHHHHHHHHHHHHHHh-c
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAEN-PTGIDILHHIE-SWSPDLQRHAYQTIADFERQ-G 138 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~ 138 (280)
++|+|+||+||||+|+...+...+.+.+ |... .......+ .........+. ..... ......+..+... .
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 80 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEK 80 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC--HHHHHHHHHHHHTTC
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhcc--HHHHHHHHHHHHHhc
Confidence 4799999999999998776655554443 4432 11112223 33333333322 10000 1122222222232 2
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....+.|++.++++.++++|++++++||+.....+ .++.+|+. |+.+++++ .+..||++..+..+++++|++|++
T Consensus 81 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 81 NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 356678999999999999999999999999988888 88999987 78877755 778899999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+++|||+. +|++||+++|+.++++.+ +. . .+++++.++.|+.++|++
T Consensus 160 ~~~iGD~~-nDi~~~~~aG~~~i~~~~----~~-~------~a~~v~~~~~el~~~l~~ 206 (207)
T 2go7_A 160 TYYIGDRT-LDVEFAQNSGIQSINFLE----ST-Y------EGNHRIQALADISRIFET 206 (207)
T ss_dssp EEEEESSH-HHHHHHHHHTCEEEESSC----CS-C------TTEEECSSTTHHHHHTSC
T ss_pred EEEECCCH-HHHHHHHHCCCeEEEEec----CC-C------CCCEEeCCHHHHHHHHhc
Confidence 99999999 999999999999999874 22 1 589999999999887753
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-27 Score=185.95 Aligned_cols=133 Identities=17% Similarity=0.264 Sum_probs=114.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCch---HHHHHHHHHcCCc--ccceeeCC-C----CCCCCChHHHHHHHHhc
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIK---EAVDLFHNRFGIT--FSPALSRE-F----RPYKPDPGPLLHICSTW 209 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---~~~~~~l~~~g~~--fd~v~~~~-~----~~~Kp~~~~~~~~~~~l 209 (280)
....++||+.++|+.|+++|++++|+||+.. ..++..++.+|+. |+.+++++ . +..||+|++|+.+++++
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 3568999999999999999999999999887 8889999999997 89988875 3 68899999999999999
Q ss_pred CCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHHh
Q 023578 210 EVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILEA 274 (280)
Q Consensus 210 gi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~~ 274 (280)
|++|++|+||||+ . +|+.+|+++|+.++++.+++.....+... ...+++++. ++.+|.++|+-
T Consensus 111 ~~~~~~~l~VGD~~~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~-~~~~~~v~~~~~l~~l~~~l~l 176 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFE-SDIIGANRAGIHAIWLQNPEVCLQDERLP-LVAPPFVIPVWDLADVPEALLL 176 (189)
T ss_dssp TCCGGGEEEEESBTT-TTHHHHHHTTCEEEEECCTTTCBCSSCCC-BCSSSCEEEESSGGGHHHHHHH
T ss_pred CCCcccEEEECCCcH-HHHHHHHHCCCeEEEECCccccccccccc-cCCCcceeccccHHhHHHHHHH
Confidence 9999999999999 8 99999999999999998744322211111 248999999 99999998764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-27 Score=198.14 Aligned_cols=133 Identities=16% Similarity=0.109 Sum_probs=111.6
Q ss_pred CCcccCcCHHHHHHHhhhCCC--eEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-C----CCCCCChHHHHHHHHhcC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKI--RRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-F----RPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~--~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~----~~~Kp~~~~~~~~~~~lg 210 (280)
....++||+.++|+.|+++|+ +++++||+....++..++.+|+. |+.+++++ . ..+||++.+|+.+++++|
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 346789999999999999999 99999999999999999999997 89888754 2 567999999999999999
Q ss_pred CCC-CcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 211 VQP-NEVMMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 211 i~~-~~~v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
++| ++|++|||+. +|+.+|+++|+.+ +++.. +.. . +.......+++++.++.||.++|++++
T Consensus 219 i~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~-~~~-~-~~~~~~~~ad~vi~sl~el~~~l~~lf 282 (282)
T 3nuq_A 219 LARYENAYFIDDSG-KNIETGIKLGMKTCIHLVE-NEV-N-EILGQTPEGAIVISDILELPHVVSDLF 282 (282)
T ss_dssp CCCGGGEEEEESCH-HHHHHHHHHTCSEEEEECS-CCC------CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred CCCcccEEEEcCCH-HHHHHHHHCCCeEEEEEcC-Ccc-c-cccccCCCCCEEeCCHHHHHHHhhhhC
Confidence 999 9999999999 9999999999954 55543 211 1 111124689999999999999998875
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=189.18 Aligned_cols=132 Identities=27% Similarity=0.323 Sum_probs=115.9
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++++.|+++ ++++++||+....++..++.+|+. |+.+++++ .+..||++.+++.+++++|++|++|
T Consensus 97 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 97 RYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 3567899999999999999 999999999999999999999998 88888865 7789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
++|||+..+|+++|+++|+.+++++++ ....+.. ..+++++.++.||.++|+++..
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~--~~~~~~~---~~a~~~~~~~~el~~~l~~~~~ 231 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKNLGMTSILLDRK--GEKREFW---DKCDFIVSDLREVIKIVDELNG 231 (234)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECSS--STTGGGG---GGCSEEESSTHHHHHHHHHHC-
T ss_pred EEEcCCcHHHHHHHHHcCCEEEEECCC--CCccccc---cCCCEeeCCHHHHHHHHHHHhh
Confidence 999999549999999999999999863 2222333 3899999999999999998754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=187.56 Aligned_cols=201 Identities=17% Similarity=0.210 Sum_probs=146.1
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCchH--HHH-HhcCCChhhHHHHhh---ccChhHHHHHHHHHHH-HHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEY--KRV-KAENPTGIDILHHIE---SWSPDLQRHAYQTIAD-FER 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~--~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~ 136 (280)
++|+|+||+||||+|+...+...+.+.+ |.+.. ... ...+.........+. .+.............. +.+
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 87 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence 4799999999999998776665554443 55432 111 123333333333322 1222222333222222 222
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.......+.|++.++++.++++|++++++||+....++..++.+|+. |+.+++++ .+..||++.+++.+++++|+++
T Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~ 167 (226)
T 1te2_A 88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDP 167 (226)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCG
T ss_pred HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCH
Confidence 22234578999999999999999999999999999899999999988 88888765 6788999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+++++|||+. +|+++|+.+|+.+++++++++ ..... +..|++++.++.|+.+.+
T Consensus 168 ~~~i~iGD~~-nDi~~a~~aG~~~~~~~~~~~-~~~~~---~~~a~~v~~~~~el~~~~ 221 (226)
T 1te2_A 168 LTCVALEDSV-NGMIASKAARMRSIVVPAPEA-QNDPR---FVLANVKLSSLTELTAKD 221 (226)
T ss_dssp GGEEEEESSH-HHHHHHHHTTCEEEECCCTTT-TTCGG---GGGSSEECSCGGGCCHHH
T ss_pred HHeEEEeCCH-HHHHHHHHcCCEEEEEcCCCC-ccccc---ccccCeEECCHHHHhHHH
Confidence 9999999999 999999999999999986432 22222 358999999999987643
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=183.92 Aligned_cols=126 Identities=19% Similarity=0.236 Sum_probs=111.1
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.+ ++.|+++ ++++++||+....++..++.+|+. |+.+++++ .+..||+|++|..+++++| |++|+
T Consensus 72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 72 NLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp TCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred ccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 4678999999 9999999 999999999999999999999988 88888865 7789999999999999999 99999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
+|||+. +|+++|+++|+.++++++++.. .... ...+++++.++.|+.++|.++
T Consensus 148 ~vGD~~-~Di~~a~~aG~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 148 LVSSNA-FDVIGAKNAGMRSIFVNRKNTI-VDPI---GGKPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp EEESCH-HHHHHHHHTTCEEEEECSSSCC-CCTT---SCCCSEEESSHHHHHHHHHHH
T ss_pred EEeCCH-HHhHHHHHCCCEEEEECCCCCC-cccc---CCCCCEEECCHHHHHHHHHhc
Confidence 999999 9999999999999999864322 1111 358999999999999998765
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=186.04 Aligned_cols=131 Identities=20% Similarity=0.201 Sum_probs=109.0
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCcccceee------CCCCCCCCCh
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGITFSPALS------REFRPYKPDP 199 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~fd~v~~------~~~~~~Kp~~ 199 (280)
...++||+.++|+.|+++|++++|+||+.. ..++..++.+|..|+.++. .+.+.+||+|
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSS
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCH
Confidence 457899999999999999999999999986 5677888899944565542 2367899999
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccc-CCCCCCEEEcCHHHHHHHHHh
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK-SNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~-~~~~~d~v~~~~~dl~~~l~~ 274 (280)
++|+.+++++|++|++|++|||+. +|+++|+++|+.++++.++ ++..+... ....++++++++.||.++|.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g--~~~~~~~~~~~~~~d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 105 GMYRDIARRYDVDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQTG--NGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp HHHHHHHHHHTCCCTTCEEEESSH-HHHHHHHHHTCEEEEESTT--THHHHHHHCCCCTTEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCcEEEECCC--CcchhhhhcccCCCcEEecCHHHHHHHHHh
Confidence 999999999999999999999999 9999999999999999852 22222221 025799999999999998864
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=193.21 Aligned_cols=125 Identities=10% Similarity=0.120 Sum_probs=106.8
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc---CCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCC
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF---GIT--FSPALSREFRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~---g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.....++||+.++|+.|+++|++++|+||+....++..++.+ |+. |+.+++++.+ +||+|++|+.+++++|++|
T Consensus 126 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~-~KP~p~~~~~~~~~lg~~p 204 (261)
T 1yns_A 126 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG-HKVESESYRKIADSIGCST 204 (261)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC-CTTCHHHHHHHHHHHTSCG
T ss_pred CcccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecCCC-CCCCHHHHHHHHHHhCcCc
Confidence 356789999999999999999999999999998888888854 466 8988877777 9999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
++|+||||+. +|+.+|+++|+.+|++.+++....... ...+++++.++.||
T Consensus 205 ~~~l~VgDs~-~di~aA~~aG~~~i~v~~~~~~~~~~~---~~~~~~~i~~l~el 255 (261)
T 1yns_A 205 NNILFLTDVT-REASAAEEADVHVAVVVRPGNAGLTDD---EKTYYSLITSFSEL 255 (261)
T ss_dssp GGEEEEESCH-HHHHHHHHTTCEEEEECCTTCCCCCHH---HHHHSCEESSGGGC
T ss_pred ccEEEEcCCH-HHHHHHHHCCCEEEEEeCCCCCccccc---ccCCCEEECCHHHh
Confidence 9999999998 999999999999999986433221111 13688999999886
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-26 Score=184.98 Aligned_cols=127 Identities=27% Similarity=0.419 Sum_probs=109.7
Q ss_pred cCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCC
Q 023578 138 GLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 138 ~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
......++||+.++++.|+++ ++++++||+... ++.+|+. |+.+++++ .+.+||+|.+|+.+++++|++|+
T Consensus 100 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 173 (230)
T 3vay_A 100 GRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDAS 173 (230)
T ss_dssp HHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGG
T ss_pred hhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCch
Confidence 345678999999999999999 999999998765 6788888 89888865 78899999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
+|++|||+..+|+++|+++|+.++++++++.... . ...+++++.++.||.++|+++
T Consensus 174 ~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~-~----~~~~~~~~~~l~el~~~l~~~ 229 (230)
T 3vay_A 174 AAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWD-A----DRLPDAEIHNLSQLPEVLARW 229 (230)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCC-S----SSCCSEEESSGGGHHHHHHTT
T ss_pred heEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCc-c----cCCCCeeECCHHHHHHHHHhh
Confidence 9999999954899999999999999986433211 1 468999999999999999864
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=192.50 Aligned_cols=195 Identities=17% Similarity=0.250 Sum_probs=146.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---C-CchHHHHH-hcCCChhhHHHHhhcc--ChhHHHHHHHHHHHHHHhcC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---G-EDEYKRVK-AENPTGIDILHHIESW--SPDLQRHAYQTIADFERQGL 139 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g-~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 139 (280)
++|+|+||+||||+|+...+...+.+++ | ........ ..|.......+.+... ...... .....+.+...
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 110 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAKFAPDFADEEYVN---KLEGEIPEKYG 110 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHHHHTTCTTCCHHHHHHHCTTCCHHHHHHHHCGGGCCHHHHH---HHHHTHHHHHC
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCCCCHHHHHHHhcCCCHHHHHHHHhccCCcHHHHH---HHHHHHHHHHh
Confidence 3799999999999999887777777765 3 22222222 2344444444443221 111111 12222333344
Q ss_pred CCcccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCCc-ccceeeCC-CCCCCCChHHHHHHHHhcCC-----
Q 023578 140 DRLQIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGIT-FSPALSRE-FRPYKPDPGPLLHICSTWEV----- 211 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi----- 211 (280)
....+.||+.++++.|+++ |++++++||+....++..++.+|+. |+.+++++ ...+||+|++++.+++++|+
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 190 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQ 190 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSS
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHcCCCcccc
Confidence 5677899999999999999 9999999999999999999999987 88888765 77899999999999999999
Q ss_pred --CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 212 --QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 212 --~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
+|++|++|||+. +|+++|+++|+.+++|.++ +...+.. +..+++++.++.|+.
T Consensus 191 ~~~~~~~i~~GDs~-nDi~~a~~AG~~~i~v~~~--~~~~~~~--~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 191 DPSKSKVVVFEDAP-AGIAAGKAAGCKIVGIATT--FDLDFLK--EKGCDIIVKNHESIR 245 (275)
T ss_dssp CGGGSCEEEEESSH-HHHHHHHHTTCEEEEESSS--SCHHHHT--TSSCSEEESSGGGEE
T ss_pred CCCcceEEEEeCCH-HHHHHHHHcCCEEEEECCC--CCHHHHh--hCCCCEEECChHHcC
Confidence 999999999999 9999999999999999863 2222222 357999999999864
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-26 Score=185.41 Aligned_cols=201 Identities=20% Similarity=0.265 Sum_probs=143.9
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHH-HhcCCChhhHHHHhhc---c--ChhHHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRV-KAENPTGIDILHHIES---W--SPDLQRHAYQTIADFE 135 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~-~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~ 135 (280)
++|+|+||+||||+|+...+...+.+.+ |.+. .... ...+.........+.. . .........+ .+.
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 79 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEK---LLD 79 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHH---HHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHH---HHH
Confidence 4799999999999998876655555443 5543 1212 2234444444433321 1 1122222222 222
Q ss_pred HhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c-cceeeCC-CCCC--CCChHHHHHHHHhc
Q 023578 136 RQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F-SPALSRE-FRPY--KPDPGPLLHICSTW 209 (280)
Q Consensus 136 ~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f-d~v~~~~-~~~~--Kp~~~~~~~~~~~l 209 (280)
+.......++||+.++++.++. +++++||+....++..++.+|+. | +.+++++ .+.+ ||++.+++.+++++
T Consensus 80 ~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l 156 (229)
T 2fdr_A 80 MRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQF 156 (229)
T ss_dssp HHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHH
T ss_pred HHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHc
Confidence 2222345689999999998875 99999999999999999999988 7 8888765 5778 99999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc---cccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSA---DDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~---~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|++|+++++|||+. +|+++|+++|+.+++++++..... .++++ .++++++.++.|+.++|+++.
T Consensus 157 ~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~--~~ad~v~~~~~el~~~l~~~~ 223 (229)
T 2fdr_A 157 GVSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASHTYPSHADRLTD--AGAETVISRMQDLPAVIAAMA 223 (229)
T ss_dssp TCCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTTCCTTHHHHHHH--HTCSEEESCGGGHHHHHHHHT
T ss_pred CCChhHeEEEcCCH-HHHHHHHHCCCEEEEEecCCccchhhhHHHhh--cCCceeecCHHHHHHHHHHhh
Confidence 99999999999999 999999999999999985322100 11222 359999999999999998763
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-26 Score=181.72 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=106.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcCCCC-CcEEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWEVQP-NEVMM 218 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~-~~~v~ 218 (280)
...++||+.++|+.|+++|++++|+||..........+ ..|+.+++++ ...+||+|++|..+++++|+.+ ++|+|
T Consensus 34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~ 110 (196)
T 2oda_A 34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVL 110 (196)
T ss_dssp GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEE
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEE
Confidence 45789999999999999999999999998877644433 3378888866 6789999999999999999975 89999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCC---C-------------------ccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRY---S-------------------ADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~---~-------------------~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
|||+. +|+++|+++|+.+|+|.+++.. . ..++. ..+++++++++.||.++|..+
T Consensus 111 VGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~--~~~~d~vi~~~~eL~~~l~~~ 186 (196)
T 2oda_A 111 ISGDP-RLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLY--SLGVHSVIDHLGELESCLADI 186 (196)
T ss_dssp EESCH-HHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH--HTTCSEEESSGGGHHHHHHHH
T ss_pred EeCCH-HHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHH--HcCCCEEeCCHHHHHHHHHHH
Confidence 99999 9999999999999999864321 0 00111 257999999999999988765
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=183.04 Aligned_cols=192 Identities=12% Similarity=0.094 Sum_probs=127.5
Q ss_pred CccEEEEeCCCcccCCCCC-------HHHHHHHHh---CCch--HHHHHh-cCCChhhHHHHhhcc-----ChhHHHHH-
Q 023578 67 RLRGVVFDMDGTLTVPVID-------FPAMYRAVL---GEDE--YKRVKA-ENPTGIDILHHIESW-----SPDLQRHA- 127 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~-------~~~~~~~~~---g~~~--~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~- 127 (280)
++|+|+|||||||+|+... +.+.+.+.+ |... ...... .+.........+..+ ........
T Consensus 30 ~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 109 (253)
T 2g80_A 30 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 109 (253)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHHH
Confidence 4899999999999998642 223333332 2221 111122 222333333333221 11111221
Q ss_pred HHHHHHHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc--C---------Cc--ccceeeCCCCC
Q 023578 128 YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF--G---------IT--FSPALSREFRP 194 (280)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~--g---------~~--fd~v~~~~~~~ 194 (280)
...+..++........++||+.++|+. |++++|+||+....++..++.. | +. |+.++......
T Consensus 110 ~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g 185 (253)
T 2g80_A 110 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG 185 (253)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC
T ss_pred HHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccC
Confidence 122333444444557889999999988 8999999999999999998877 4 33 45544433312
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
.||+|+.|..+++++|++|++|+||||+. +|+++|+++||.++++++.+. ..... ..++++++++.||
T Consensus 186 ~KP~p~~~~~a~~~lg~~p~~~l~vgDs~-~di~aA~~aG~~~i~v~~~~~---~~~~~--~~~~~~i~~l~eL 253 (253)
T 2g80_A 186 KKTETQSYANILRDIGAKASEVLFLSDNP-LELDAAAGVGIATGLASRPGN---APVPD--GQKYQVYKNFETL 253 (253)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHTTTCEEEEECCTTS---CCCCS--SCCSCEESCSTTC
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHcCCEEEEEcCCCC---CCccc--ccCCCccCChhhC
Confidence 59999999999999999999999999999 999999999999999986332 12111 2478899998774
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-26 Score=184.65 Aligned_cols=193 Identities=19% Similarity=0.177 Sum_probs=127.5
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHH-H---h-cCCCh---------hhHHHHhhccChhHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRV-K---A-ENPTG---------IDILHHIESWSPDLQRHAY 128 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~-~---~-~~~~~---------~~~~~~~~~~~~~~~~~~~ 128 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. .... + . .+... ......+..........
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 79 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYPSER-- 79 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCCCHH--
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCCcHH--
Confidence 3799999999999998876665555544 5433 1111 1 0 11110 00111111111100011
Q ss_pred HHHHHHHHhc--CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHH
Q 023578 129 QTIADFERQG--LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLL 203 (280)
Q Consensus 129 ~~~~~~~~~~--~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~ 203 (280)
....+.+.+ .....++||+.++|+.|+++|++++++||+.. .++..++.+|+. |+.+++++ .+..||+|++|+
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (220)
T 2zg6_A 80 -LVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFG 157 (220)
T ss_dssp -HHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHH
T ss_pred -HHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence 112222221 23457899999999999999999999999976 478889999998 89888865 778999999999
Q ss_pred HHHHhcCCCCCcEEEEcCCchh-hHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 204 HICSTWEVQPNEVMMVGDSLKD-DVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~-Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
.+++++|++| ++|||+. + |+.+|+++|+.++++.+.+. . .+ . ++++.++.|+.++|.+++
T Consensus 158 ~~~~~~~~~~---~~vgD~~-~~Di~~a~~aG~~~i~v~~~~~---~--~~---~-~~~i~~l~el~~~l~~~~ 218 (220)
T 2zg6_A 158 FALAKVGYPA---VHVGDIY-ELDYIGAKRSYVDPILLDRYDF---Y--PD---V-RDRVKNLREALQKIEEMN 218 (220)
T ss_dssp HHHHHHCSSE---EEEESSC-CCCCCCSSSCSEEEEEBCTTSC---C--TT---C-CSCBSSHHHHHHHHHHHC
T ss_pred HHHHHcCCCe---EEEcCCc-hHhHHHHHHCCCeEEEECCCCC---C--CC---c-ceEECCHHHHHHHHHHhc
Confidence 9999999988 9999999 8 99999999999999975321 1 11 1 578999999999998764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=180.89 Aligned_cols=129 Identities=18% Similarity=0.192 Sum_probs=109.6
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCc---------------hHHHHHHHHHcCCcccceeeC-------------CC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNI---------------KEAVDLFHNRFGITFSPALSR-------------EF 192 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~---------------~~~~~~~l~~~g~~fd~v~~~-------------~~ 192 (280)
...++||+.++|+.|+++|++++|+||+. ...++..++.+|+.|+.++.+ +.
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~ 127 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVC 127 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCC
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccC
Confidence 45789999999999999999999999998 477888999999887765531 25
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
+.+||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|+.+ +++.++. ...+.. ...+++++.++.||.++
T Consensus 128 ~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g~--~~~~~~--~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 128 DCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGK--PITPEA--ENAADWVLNSLADLPQA 202 (211)
T ss_dssp SSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSS--CCCHHH--HHHCSEEESCGGGHHHH
T ss_pred cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCceEEEEecCC--Cccccc--cCCCCEEeCCHHHHHHH
Confidence 6789999999999999999999999999999 9999999999999 9997532 222211 24699999999999998
Q ss_pred HHh
Q 023578 272 LEA 274 (280)
Q Consensus 272 l~~ 274 (280)
|..
T Consensus 203 l~~ 205 (211)
T 2gmw_A 203 IKK 205 (211)
T ss_dssp HHC
T ss_pred HHh
Confidence 876
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=183.65 Aligned_cols=198 Identities=12% Similarity=0.071 Sum_probs=134.6
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCchHH-------HHHh-cCCCh-hhHHHHhhc-cChhHHHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEYK-------RVKA-ENPTG-IDILHHIES-WSPDLQRHAYQTIA 132 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~~-------~~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ 132 (280)
.++|+|+||+||||+|+...+..++.+.+ |.+... .++. .+... ......+.. ...+ ...+.+.
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~ 85 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD---TRLLLMS 85 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC---TGGGGGH
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc---hHHHHHH
Confidence 35799999999999999887766666654 544321 1111 22211 111111110 0000 0111122
Q ss_pred HHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcC
Q 023578 133 DFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 133 ~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lg 210 (280)
.++........++||+.++|+.|+++| +++|+||+....++..++.+|+. |+.+++. +++|+..++.+++ |
T Consensus 86 ~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~----~~~K~~~~~~~~~--~ 158 (231)
T 2p11_A 86 SFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLI----YIHKELMLDQVME--C 158 (231)
T ss_dssp HHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE----ESSGGGCHHHHHH--H
T ss_pred HHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe----cCChHHHHHHHHh--c
Confidence 333334456789999999999999999 99999999999999999999987 6665431 2344677777776 7
Q ss_pred CCCCcEEEEcCCchh---hHHHHHHcCCcEEEEcCCCCC-CccccccCCC-CCCEEEcCHHHHHHHHHhcc
Q 023578 211 VQPNEVMMVGDSLKD---DVACGKRAGAFTCLLDETGRY-SADDFTKSNL-QPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 211 i~~~~~v~iGDs~~~---Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~-~~d~v~~~~~dl~~~l~~~~ 276 (280)
++|++|++|||+. + |+.+|+++|+.++++.++... ...+... . .+++++.++.||.++|.+++
T Consensus 159 ~~~~~~~~vgDs~-~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~--~~~~~~~i~~~~el~~~l~~~~ 226 (231)
T 2p11_A 159 YPARHYVMVDDKL-RILAAMKKAWGARLTTVFPRQGHYAFDPKEISS--HPPADVTVERIGDLVEMDAEWL 226 (231)
T ss_dssp SCCSEEEEECSCH-HHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHH--SCCCSEEESSGGGGGGCGGGGC
T ss_pred CCCceEEEEcCcc-chhhhhHHHHHcCCeEEEeCCCCCCCcchhccc--cCCCceeecCHHHHHHHHHHHH
Confidence 8999999999999 8 999999999999999853111 1112222 3 49999999999998887765
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=171.47 Aligned_cols=185 Identities=14% Similarity=0.173 Sum_probs=127.8
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHH-HH-h---cCCChhhHHH-HhhccChhHHHHHHHHHHHHHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKR-VK-A---ENPTGIDILH-HIESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~-~~-~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
++|+|+||+||||+++.. ...+.+..|...... .. . ......+... .+..+..... ...+....
T Consensus 3 ~~k~vifDlDGTL~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 72 (217)
T 3m1y_A 3 LQKLAVFDFDSTLVNAET--IESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPL--------KLAKEVCE 72 (217)
T ss_dssp CCEEEEEECBTTTBSSCH--HHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTTTCBH--------HHHHHHHT
T ss_pred CCcEEEEeCCCCCCCchh--HHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhcCCCH--------HHHHHHHh
Confidence 589999999999998653 233444435433110 00 0 0001111111 1111111111 11122224
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cccee-----------eCCCCCCCCChHHHHHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL-----------SREFRPYKPDPGPLLHICS 207 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~-----------~~~~~~~Kp~~~~~~~~~~ 207 (280)
...++||+.++++.|+++|++++++||+....++..++.+|+. |+.++ +++...+|||+.+++.+++
T Consensus 73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 73 SLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp TCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred cCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 4679999999999999999999999999999999999999998 67664 3445678999999999999
Q ss_pred hcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHH
Q 023578 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSI 271 (280)
Q Consensus 208 ~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~ 271 (280)
++|++|++|++|||+. +|+.+|+++|+.+++ + +..+.+ ..+++++.+ +.++.++
T Consensus 153 ~~g~~~~~~i~vGDs~-~Di~~a~~aG~~~~~-~-----~~~~l~---~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGA-NDLSMFKHAHIKIAF-N-----AKEVLK---QHATHCINEPDLALIKPL 208 (217)
T ss_dssp HHTCCSTTEEEEECSG-GGHHHHTTCSEEEEE-S-----CCHHHH---TTCSEEECSSBGGGGTTC
T ss_pred HcCCCHhHEEEEeCCH-HHHHHHHHCCCeEEE-C-----ccHHHH---HhcceeecccCHHHHHHH
Confidence 9999999999999999 999999999998877 3 222333 489999974 4454443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-24 Score=170.79 Aligned_cols=100 Identities=19% Similarity=0.247 Sum_probs=92.9
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.++++.|+++| +++++||+....++..++.+|+. |+.+++++ .+..||+|++++.+++++|++|++|+
T Consensus 84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 84 QSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4458999999999999999 99999999999999999999987 88888765 77899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|||+. +|+++|+++|+.++++++
T Consensus 163 ~vgD~~-~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 163 MVDDRL-QNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp EEESCH-HHHHHHHHTTCEEEECSC
T ss_pred EeCCCH-HHHHHHHHCCCEEEEECC
Confidence 999999 999999999999999874
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=164.82 Aligned_cols=167 Identities=19% Similarity=0.254 Sum_probs=118.6
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch-HHHHH-hc-CCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE-YKRVK-AE-NPTGIDILHHIESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
++|+|+||+||||+|+...+...+.+.+ |.+. ..... .. +.........+.. ... ....+.........
T Consensus 5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~ 79 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPN-LEN----FLEKYKENEARELE 79 (190)
T ss_dssp CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHHHCTT-CTT----HHHHHHHHHHHHTT
T ss_pred cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHHHHHHHhhh-HHH----HHHHHHHHHHHhcC
Confidence 4799999999999998776665555543 5432 11111 11 1111111111111 011 11122222222223
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++|++.++++.|+++|++++++||... .++..++.+|+. |+.+++++ .+.+||++..++.+++++|++ +|+
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~ 156 (190)
T 2fi1_A 80 HPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGL 156 (190)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEE
T ss_pred cCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEE
Confidence 334899999999999999999999999864 678888999987 88888765 778999999999999999998 999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|||+. +|+++|+++|+.++++++
T Consensus 157 ~iGD~~-~Di~~a~~aG~~~~~~~~ 180 (190)
T 2fi1_A 157 VIGDRP-IDIEAGQAAGLDTHLFTS 180 (190)
T ss_dssp EEESSH-HHHHHHHHTTCEEEECSC
T ss_pred EEcCCH-HHHHHHHHcCCeEEEECC
Confidence 999999 999999999999999873
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=170.84 Aligned_cols=172 Identities=19% Similarity=0.202 Sum_probs=119.0
Q ss_pred CccEEEEeCCCcccCCCCCHH-HHHHHHhCCchHHHH-Hhc-CCChhhHHHHhhccChhHH-HHHHHHH------HHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFP-AMYRAVLGEDEYKRV-KAE-NPTGIDILHHIESWSPDLQ-RHAYQTI------ADFER 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~-~~~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~ 136 (280)
++|+|+||+||||+|+...+. ..+.+. |.+..... +.. +......... ..+..... ......+ ..+..
T Consensus 4 m~k~iiFDlDGTL~d~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNREESIRRFKAI-GVADIEEMLDPYLQKGLFLDLES-GRKSEEEFRTELSRYIGKELTYQQVYD 81 (211)
T ss_dssp CCSEEEECSBTTTEEECHHHHHHHHHHT-TCTTHHHHTCC---CCHHHHHHH-SSSCHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred cceEEEEeCCCeeEecchHHHHHHHHHh-CCchHHHHHHHHhCchHHHHHHc-CCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 479999999999999876543 444443 55432111 111 1111111100 01111111 1111111 01111
Q ss_pred hcC-CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH------cCCc--ccceeeCC-CCCCCCChHHHHHHH
Q 023578 137 QGL-DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR------FGIT--FSPALSRE-FRPYKPDPGPLLHIC 206 (280)
Q Consensus 137 ~~~-~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~------~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~ 206 (280)
.+. ....++||+.++++.|++ |++++++||+....++..++. +|+. |+.+++++ .+..||+|++|..++
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~ 160 (211)
T 2i6x_A 82 ALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMI 160 (211)
T ss_dssp HHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHH
T ss_pred HHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHH
Confidence 111 234688999999999999 999999999999988888888 7887 88888765 778999999999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+++|++|++|++|||+. +|+++|+++|+.+++++.
T Consensus 161 ~~~~~~~~~~~~igD~~-~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 161 ADSGMKPEETLFIDDGP-ANVATAERLGFHTYCPDN 195 (211)
T ss_dssp HHHCCCGGGEEEECSCH-HHHHHHHHTTCEEECCCT
T ss_pred HHhCCChHHeEEeCCCH-HHHHHHHHcCCEEEEECC
Confidence 99999999999999999 999999999999999874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=173.48 Aligned_cols=100 Identities=12% Similarity=0.208 Sum_probs=89.5
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-cCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-FGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
..++||+.++++.|+++|++++++||+....++..++. +|+. |+.+++++ .+..||+|+.+..+++++|++|++|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 57899999999999999999999999887776665655 6666 88888865 77899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|||+. +|+.+|+++|+.+++++.
T Consensus 170 ~vgD~~-~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 170 FFDDNA-DNIEGANQLGITSILVKD 193 (206)
T ss_dssp EEESCH-HHHHHHHTTTCEEEECCS
T ss_pred EeCCCH-HHHHHHHHcCCeEEEecC
Confidence 999999 999999999999999874
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=171.60 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=89.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHH------HHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH------NRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l------~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.+.||+.++++.|+++ ++++++||+.....+.++ +.+|+. |+.+++++ .+..||+|.+|+.+++++|++|
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 4679999999999999 999999999999888655 667776 88887765 7889999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
++|++|||+. +|+++|+++|+.+++++.
T Consensus 191 ~~~~~vGD~~-~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 191 KETFFIDDSE-INCKVAQELGISTYTPKA 218 (229)
T ss_dssp GGEEEECSCH-HHHHHHHHTTCEEECCCT
T ss_pred HHeEEECCCH-HHHHHHHHcCCEEEEECC
Confidence 9999999999 999999999999999985
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-25 Score=183.65 Aligned_cols=199 Identities=21% Similarity=0.228 Sum_probs=131.5
Q ss_pred CccEEEEeCCCcccCCCCCHHHH------HHHHhCCchHHHHHhcCCChhhHHHHhhcc--C--hhHHHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAM------YRAVLGEDEYKRVKAENPTGIDILHHIESW--S--PDLQRHAYQTIADFER 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~ 136 (280)
++|+|+||+||||+|+...+... +++. |.+........++........+... . .............+.+
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLR 80 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHHHH
Confidence 37999999999999886643322 2222 5443211112244555555554332 1 1111011111223333
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEE---------------------------------EEeCCchHHHHHHHHHcC-C
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRG---------------------------------LITRNIKEAVDLFHNRFG-I 182 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~---------------------------------ivS~~~~~~~~~~l~~~g-~ 182 (280)
.......+.||+.++++.++++|++++ ++||.. ......++.+| +
T Consensus 81 ~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~~~~ 159 (250)
T 2c4n_A 81 RQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPACGAL 159 (250)
T ss_dssp TSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCHHHH
T ss_pred hcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecchHH
Confidence 444556788999999999999999999 888876 33333333333 2
Q ss_pred c--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCC
Q 023578 183 T--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQP 258 (280)
Q Consensus 183 ~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 258 (280)
. |+.+.+.+ ...+||++.+++.+++++|++|++|++|||+ . ||++||+.+|+.+++|.++. ....+.......|
T Consensus 160 ~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~-nDi~~~~~aG~~~~~v~~g~-~~~~~~~~~~~~~ 237 (250)
T 2c4n_A 160 CAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLR-TDILAGFQAGLETILVLSGV-SSLDDIDSMPFRP 237 (250)
T ss_dssp HHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTT-THHHHHHHTTCEEEEESSSS-CCGGGGSSCSSCC
T ss_pred HHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCch-hHHHHHHHcCCeEEEECCCC-CChhhhhhcCCCC
Confidence 2 55555555 4688999999999999999999999999999 8 99999999999999998632 2222332223589
Q ss_pred CEEEcCHHHHH
Q 023578 259 DFRVSSLTEVL 269 (280)
Q Consensus 259 d~v~~~~~dl~ 269 (280)
+++++++.||.
T Consensus 238 ~~v~~~~~el~ 248 (250)
T 2c4n_A 238 SWIYPSVAEID 248 (250)
T ss_dssp SEEESSGGGCC
T ss_pred CEEECCHHHhh
Confidence 99999999874
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=170.78 Aligned_cols=189 Identities=15% Similarity=0.214 Sum_probs=123.7
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCch--HHHHHh-cCC--ChhhHHHHh-hccChhHHHHHHHHHHHHHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDE--YKRVKA-ENP--TGIDILHHI-ESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~--~~~~~~-~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
++|+|+||+||||+|+.. +....+.. |.+. ...... .+. ...+..... ..+.. . .+.+.++... .
T Consensus 13 ~~k~viFD~DGTLvd~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~--~ 83 (225)
T 1nnl_A 13 SADAVCFDVDSTVIREEG-IDELAKIC-GVEDAVSEMTRRAMGGAVPFKAALTERLALIQP-S----REQVQRLIAE--Q 83 (225)
T ss_dssp HCSEEEEETBTTTBSSCH-HHHHHHHT-TCTTTC------------CHHHHHHHHHHHHCC-C----HHHHHHHHHH--S
T ss_pred hCCEEEEeCccccccccc-HHHHHHHh-CCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcC-C----HHHHHHHHHh--c
Confidence 379999999999999864 34444444 6543 111111 111 111111111 00010 0 1112222222 2
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----cccee---------eCCCCC----CCCChHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSPAL---------SREFRP----YKPDPGPLL 203 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~v~---------~~~~~~----~Kp~~~~~~ 203 (280)
...++||+.++|+.|+++|++++|+||+....++..++.+|+. |+.++ +.+... .+|||..++
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 163 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 163 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence 4678999999999999999999999999999999999999985 44332 233321 468889999
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.+++++|+ ++|++|||+. +|+.+|+++|+ ++++.. ....... ...+++++.++.|+.++|+
T Consensus 164 ~~~~~~~~--~~~~~vGDs~-~Di~~a~~ag~-~i~~~~--~~~~~~~---~~~~~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 164 LLKEKFHF--KKIIMIGDGA-TDMEACPPADA-FIGFGG--NVIRQQV---KDNAKWYITDFVELLGELE 224 (225)
T ss_dssp HHHHHHCC--SCEEEEESSH-HHHTTTTTSSE-EEEECS--SCCCHHH---HHHCSEEESCGGGGCC---
T ss_pred HHHHHcCC--CcEEEEeCcH-HhHHHHHhCCe-EEEecC--ccccHHH---HhcCCeeecCHHHHHHHHh
Confidence 99999998 7899999999 99999999999 888753 1111111 2379999999999987764
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=170.79 Aligned_cols=132 Identities=21% Similarity=0.250 Sum_probs=111.3
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCccccee-e------------CCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGITFSPAL-S------------REF 192 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~fd~v~-~------------~~~ 192 (280)
...++||+.++|+.|+++|++++++||+.. ..++..++.+|+.|+.++ + .+.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~ 133 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDH 133 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCC
Confidence 457899999999999999999999999987 678889999998766543 3 235
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
..+||+|.+|+.+++++|++|++++||||+. +|+++|+++|+.+ +++.++ ....+. ....+++++.++.||.++
T Consensus 134 ~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g--~~~~~~--~~~~~~~~i~~l~el~~~ 208 (218)
T 2o2x_A 134 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDGE--AAVQPG--FAIRPLRDSSELGDLLAA 208 (218)
T ss_dssp TTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEETCC--CEEETT--EEEEEESSHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCH-HHHHHHHHCCCCEeEEEecC--CCCccc--ccCCCCEecccHHHHHHH
Confidence 6889999999999999999999999999999 9999999999999 999752 211111 124788999999999999
Q ss_pred HHhccC
Q 023578 272 LEANFD 277 (280)
Q Consensus 272 l~~~~~ 277 (280)
|.++..
T Consensus 209 l~~~~~ 214 (218)
T 2o2x_A 209 IETLGR 214 (218)
T ss_dssp HHHTCC
T ss_pred HHHHhc
Confidence 987754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=178.29 Aligned_cols=190 Identities=14% Similarity=0.205 Sum_probs=128.5
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHhCCch-HHH-HH--hcCC-ChhhHHH-HhhccChhHHHHHHHHHHHHHHhc
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDE-YKR-VK--AENP-TGIDILH-HIESWSPDLQRHAYQTIADFERQG 138 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~-~~~-~~--~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
.+++|+|+||+||||+|+... ..... .+|... ... .. ..+. ...+... .+..+.....+ ..+.+
T Consensus 105 ~~~~kaviFDlDGTLid~~~~-~~la~-~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~--------~i~~~ 174 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV-DEIAR-ELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKA--------VLNAV 174 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH-HHHHH-HTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHH--------HHHHH
T ss_pred CCCCCEEEEcCCCCccCCccH-HHHHH-HhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHH--------HHHHH
Confidence 456899999999999988653 22223 336543 111 11 1111 1111111 11111111111 11112
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cccee-----------eCCCCCCCCChHHHHHH
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL-----------SREFRPYKPDPGPLLHI 205 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~-----------~~~~~~~Kp~~~~~~~~ 205 (280)
.....++||+.++++.|+++|++++|+||+....++.+++.+|+. |+.++ +++...+||+++.+..+
T Consensus 175 ~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~ 254 (317)
T 4eze_A 175 CDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL 254 (317)
T ss_dssp HHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence 234679999999999999999999999999999999999999998 65543 23345679999999999
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHHh
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILEA 274 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~~ 274 (280)
++++|++|++|++|||+. +|+.+|+++|+.+++ + +...... .++.++ .++.++..+|++
T Consensus 255 ~~~lgv~~~~~i~VGDs~-~Di~aa~~AG~~va~-~-----~~~~~~~---~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 255 AARLNIATENIIACGDGA-NDLPMLEHAGTGIAW-K-----AKPVVRE---KIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp HHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE-S-----CCHHHHH---HCCEEESSSCGGGGGGGTCS
T ss_pred HHHcCCCcceEEEEeCCH-HHHHHHHHCCCeEEe-C-----CCHHHHH---hcCeeeCCCCHHHHHHHHHh
Confidence 999999999999999999 999999999998776 3 1222222 455554 477777776654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=163.84 Aligned_cols=126 Identities=13% Similarity=0.168 Sum_probs=98.1
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----ccc--eeeCC-----CCCCCCChHHH-HHHHHhc
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSP--ALSRE-----FRPYKPDPGPL-LHICSTW 209 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~--v~~~~-----~~~~Kp~~~~~-~~~~~~l 209 (280)
..+.||+.++++.|+++|++++++||+....++..++.+|+. |.. +++.+ ....||++..+ ..+++.+
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK 160 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence 458899999999999999999999999999999999999985 221 22222 13466666544 4455666
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
|+++++|++|||+. +|++|+ ++|+.++++.....+..... +..+++++.++.||.++|
T Consensus 161 ~~~~~~~~~vGD~~-~Di~~~-~~G~~~~~v~~~~~~~~~~~---~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 161 GLIDGEVIAIGDGY-TDYQLY-EKGYATKFIAYMEHIEREKV---INLSKYVARNVAELASLI 218 (219)
T ss_dssp GGCCSEEEEEESSH-HHHHHH-HHTSCSEEEEECSSCCCHHH---HHHCSEEESSHHHHHHHH
T ss_pred CCCCCCEEEEECCH-hHHHHH-hCCCCcEEEeccCccccHHH---HhhcceeeCCHHHHHHhh
Confidence 99999999999999 999998 68999888875433333222 247999999999999876
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-24 Score=175.57 Aligned_cols=191 Identities=15% Similarity=0.149 Sum_probs=128.8
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHH---HhcC-CChhhHHHHhh-ccChhHHHHHHHHHHHHHHhcCCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRV---KAEN-PTGIDILHHIE-SWSPDLQRHAYQTIADFERQGLDR 141 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~---~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 141 (280)
++|+|+||+||||+|+.. .....+.+ +....... ...+ .+..+....+. .+.....+.+.+ +. ...
T Consensus 5 ~~k~viFD~DGTL~d~ds-~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~ 75 (236)
T 2fea_A 5 RKPFIICDFDGTITMNDN-IINIMKTF-APPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITS----FV---LED 75 (236)
T ss_dssp CCEEEEECCTTTTBSSCH-HHHHHHHH-SCTHHHHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHH----HH---HHH
T ss_pred CCcEEEEeCCCCCCccch-HHHHHHHh-chhhHHHHHHHHHhCcCcHHHHHHHHHHhcCCChHHHHHH----HH---hcC
Confidence 468999999999996533 12222222 43221111 1111 22333333332 222221222221 21 234
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceeeCCC-CC--------CCCChHH-HH-------
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALSREF-RP--------YKPDPGP-LL------- 203 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~~~-~~--------~Kp~~~~-~~------- 203 (280)
..++||+.++|+.|+++|++++|+||+....++..++ |+. ++.+++++. .. .||+|.. +.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 6799999999999999999999999999998988888 764 777887652 22 7898884 54
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
.+++++|++|++|+||||+. +|+.+|+++|+.++.. +. ...... ...+++++.++.|+.++|.++
T Consensus 154 ~~~~~~~~~~~~~~~vGDs~-~Di~~a~~aG~~~~~~----~~-~~~~~~-~~~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 154 SVIHELSEPNQYIIMIGDSV-TDVEAAKLSDLCFARD----YL-LNECRE-QNLNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp HHHHHHCCTTCEEEEEECCG-GGHHHHHTCSEEEECH----HH-HHHHHH-TTCCEECCSSHHHHHHHHHTS
T ss_pred HHHHHHhccCCeEEEEeCCh-HHHHHHHhCCeeeech----HH-HHHHHH-CCCCeeecCCHHHHHHHHHHh
Confidence 89999999999999999999 9999999999988631 11 112221 113899999999999998765
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=162.82 Aligned_cols=186 Identities=14% Similarity=0.205 Sum_probs=129.4
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHH----Hhh--ccChhHHHHHHHHHHHHHHhcCCC
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILH----HIE--SWSPDLQRHAYQTIADFERQGLDR 141 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 141 (280)
+|+|+||+||||+| ..+...+++. |.+................. .+. .+..+ ...+ ....
T Consensus 2 ~k~viFD~DGTL~d--~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~ 67 (206)
T 1rku_A 2 MEIACLDLEGVLVP--EIWIAFAEKT-GIDALKATTRDIPDYDVLMKQRLRILDEHGLKLG-------DIQE----VIAT 67 (206)
T ss_dssp CEEEEEESBTTTBC--CHHHHHHHHH-TCGGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHH-------HHHH----HHTT
T ss_pred CcEEEEccCCcchh--hHHHHHHHHc-CChHHHHHhcCcCCHHHHHHHHHHHHHHCCCCHH-------HHHH----HHHh
Confidence 68999999999998 4455555555 76531100000000011110 000 11111 1111 1246
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c-cceeeCCCC---CC-CCChHHHHHHHHhcCCCCC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F-SPALSREFR---PY-KPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f-d~v~~~~~~---~~-Kp~~~~~~~~~~~lgi~~~ 214 (280)
..++||+.++++.|+++ ++++++||+....++..++.+|+. | +.+++++.. .. +|+|..+..+++++|..|+
T Consensus 68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~ 146 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 146 (206)
T ss_dssp CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence 67899999999999999 999999999999999999999988 7 456554432 11 4888999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEE-EcCHHHHHHHHHhccC
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFR-VSSLTEVLSILEANFD 277 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v-~~~~~dl~~~l~~~~~ 277 (280)
+|++|||+. +|+.+|+++|+.+++ + ...+... ..++++ ++++.++.++|+++..
T Consensus 147 ~~~~iGD~~-~Di~~a~~aG~~~~~-~-----~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 147 RVIAAGDSY-NDTTMLSEAHAGILF-H-----APENVIR--EFPQFPAVHTYEDLKREFLKASS 201 (206)
T ss_dssp EEEEEECSS-TTHHHHHHSSEEEEE-S-----CCHHHHH--HCTTSCEECSHHHHHHHHHHHCS
T ss_pred EEEEEeCCh-hhHHHHHhcCccEEE-C-----CcHHHHH--HHhhhccccchHHHHHHHHHHhc
Confidence 999999999 999999999998664 3 1122222 356664 9999999999987754
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=173.06 Aligned_cols=128 Identities=19% Similarity=0.174 Sum_probs=101.1
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc---ceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS---PALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd---~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
++|++.++++.|+ +|+++ ++||.........+..+|+. |+ .+++++ ...+||+|.+|+.+++++|++|++|+
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 200 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV 200 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence 6789999999999 89999 99997765544445566665 44 344444 56789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+|||+..+|+++|+++|+.+++|.++. +...+.......++++++++.|+.++|.+
T Consensus 201 ~iGD~~~~Di~~a~~aG~~~i~v~~g~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 201 MIGDDCRDDVDGAQNIGMLGILVKTGK-YKAADEEKINPPPYLTCESFPHAVDHILQ 256 (259)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEESSTT-CCTTGGGGSSSCCSEEESCHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCC-CCcccccccCCCCCEEECCHHHHHHHHHH
Confidence 999996699999999999999998632 22222211135899999999999998865
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=163.33 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=88.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCC---------------chHHHHHHHHHcCCccccee-e-----CCCCCCCCCh
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRN---------------IKEAVDLFHNRFGITFSPAL-S-----REFRPYKPDP 199 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~---------------~~~~~~~~l~~~g~~fd~v~-~-----~~~~~~Kp~~ 199 (280)
...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.|+.++ + .+.+..||+|
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p 119 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKV 119 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSC
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCCcccccccCCCH
Confidence 5578999999999999999999999998 67788889999999888875 4 4577899999
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
++|+.+++++|++|++|+||||+. +|+++|+++|+.+|++.+
T Consensus 120 ~~~~~~~~~~gi~~~~~l~VGD~~-~Di~~A~~aG~~~i~v~~ 161 (176)
T 2fpr_A 120 KLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDR 161 (176)
T ss_dssp GGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBT
T ss_pred HHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHcCCeEEEEcC
Confidence 999999999999999999999999 999999999999999874
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=159.38 Aligned_cols=185 Identities=17% Similarity=0.211 Sum_probs=121.6
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchH-HHH--Hhc-C-CChhhHHHH-hhccChhHHHHHHHHHHHHHHhcCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEY-KRV--KAE-N-PTGIDILHH-IESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~-~~~--~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
++|+|+|||||||+|+.. + ..+.+..|.... ... +.. + ......... ...+...... ...... .
T Consensus 4 ~~k~i~fDlDGTL~d~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~ 73 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNET-I-DEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIE----KVEKAI----K 73 (211)
T ss_dssp CCEEEEEECCCCCBSSCH-H-HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHH----HHHHHH----H
T ss_pred CCcEEEEeCCCCCCCccH-H-HHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcCCCHH----HHHHHH----H
Confidence 479999999999999853 3 344444365431 111 111 1 111111111 0001100000 011111 2
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceee-C----------CCCCCCCChHHHHHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALS-R----------EFRPYKPDPGPLLHICS 207 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~-~----------~~~~~Kp~~~~~~~~~~ 207 (280)
...+.|++.++++.++++|++++++||+....++..++.+|+. |+..+. . +...+++|+..+..+++
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 3467899999999999999999999999888888888888876 433221 1 11235677899999999
Q ss_pred hcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHH
Q 023578 208 TWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSI 271 (280)
Q Consensus 208 ~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~ 271 (280)
++|+++++|++|||+. +|++|++++|+.+++ . +....+ ..+++++.+ +.||.++
T Consensus 154 ~lgi~~~~~~~iGD~~-~Di~~~~~ag~~~~~-~-----~~~~~~---~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGA-NDISMFKKAGLKIAF-C-----AKPILK---EKADICIEKRDLREILKY 209 (211)
T ss_dssp HHTCCGGGEEEEECSG-GGHHHHHHCSEEEEE-S-----CCHHHH---TTCSEEECSSCGGGGGGG
T ss_pred HcCCCHHHEEEEecCh-hHHHHHHHCCCEEEE-C-----CCHHHH---hhcceeecchhHHHHHHh
Confidence 9999999999999999 999999999997543 2 122332 479999998 8888654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=182.21 Aligned_cols=103 Identities=17% Similarity=0.248 Sum_probs=87.8
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCC------chHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcCC
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRN------IKEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWEV 211 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~------~~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi 211 (280)
.....++||+.++|+.|+++|++++|+||+ ........+..+.-.|+.+++++ .+.+||+|++|+.+++++|+
T Consensus 96 ~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~ 175 (555)
T 3i28_A 96 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175 (555)
T ss_dssp HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred HhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 345689999999999999999999999998 44444433333322389988865 88999999999999999999
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 212 QPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 212 ~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|++|++|||+. +|+++|+++|+.++++++
T Consensus 176 ~p~~~~~v~D~~-~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 176 SPSEVVFLDDIG-ANLKPARDLGMVTILVQD 205 (555)
T ss_dssp CGGGEEEEESCH-HHHHHHHHHTCEEEECSS
T ss_pred ChhHEEEECCcH-HHHHHHHHcCCEEEEECC
Confidence 999999999999 999999999999999875
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.7e-23 Score=153.08 Aligned_cols=98 Identities=10% Similarity=0.081 Sum_probs=90.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
.++||+.++++.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||+|+.|+.+++++|++|+++++|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 97 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLV 97 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 46789999999999999999999999988888888888876 88888754 6789999999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEc
Q 023578 220 GDSLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v~ 241 (280)
||+. +|+.+|+++|+.+++++
T Consensus 98 gD~~-~di~~a~~~G~~~i~~~ 118 (137)
T 2pr7_A 98 DDSI-LNVRGAVEAGLVGVYYQ 118 (137)
T ss_dssp ESCH-HHHHHHHHHTCEEEECS
T ss_pred cCCH-HHHHHHHHCCCEEEEeC
Confidence 9999 99999999999999986
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=172.66 Aligned_cols=188 Identities=18% Similarity=0.213 Sum_probs=127.4
Q ss_pred CCCccEEEEeCCCcccCCCCCHHHHHHHHhCCch-HHHHH---hcCC-ChhhHHH-HhhccChhHHHHHHHHHHHHHHhc
Q 023578 65 KTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDE-YKRVK---AENP-TGIDILH-HIESWSPDLQRHAYQTIADFERQG 138 (280)
Q Consensus 65 ~~~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~-~~~~~---~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
.+++|+|+|||||||+++.. + ..+.+..|... ...+. ..+. ...+... .+..+....... . +.+
T Consensus 182 ~~~~k~viFD~DgTLi~~~~-~-~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~----~----~~~ 251 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEV-I-EMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATV----I----DEV 251 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCH-H-HHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHH----H----HHH
T ss_pred ccCCcEEEEcCcccCcCCch-H-HHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHH----H----HHH
Confidence 45689999999999998753 2 33333336543 11111 0111 1111111 111111100000 1 111
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc-------ceee----CCCCCCCCChHHHHHH
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS-------PALS----REFRPYKPDPGPLLHI 205 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd-------~v~~----~~~~~~Kp~~~~~~~~ 205 (280)
.....++||+.++++.|+++|++++++||+....++.+++.+|+. |+ .+++ ++...+||+++.|+.+
T Consensus 252 ~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~ 331 (415)
T 3p96_A 252 AGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF 331 (415)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence 124579999999999999999999999999999999999999987 33 2222 2455689999999999
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHH
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSIL 272 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l 272 (280)
++++|++|++|++|||+. +|+.+|+++|+.+++ + +....+ ..+++++. ++.+++.++
T Consensus 332 ~~~~gi~~~~~i~vGD~~-~Di~~a~~aG~~va~-~-----~~~~~~---~~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 332 AQRAGVPMAQTVAVGDGA-NDIDMLAAAGLGIAF-N-----AKPALR---EVADASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE-S-----CCHHHH---HHCSEEECSSCTTHHHHHT
T ss_pred HHHcCcChhhEEEEECCH-HHHHHHHHCCCeEEE-C-----CCHHHH---HhCCEEEccCCHHHHHHHh
Confidence 999999999999999999 999999999998876 3 222333 36788765 667776655
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-23 Score=167.39 Aligned_cols=178 Identities=15% Similarity=0.140 Sum_probs=126.3
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh-CCch--HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhc--CCCc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL-GEDE--YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQG--LDRL 142 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~-g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 142 (280)
.|+|+|||||||+|+...+..++++.+ |.+. ...++... ....... +.++. .+.+..++... ....
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~ 72 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFL--AREQYRA---LRPDL----ADKVASVYEAPGFFLDL 72 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHSTTSCCCCGGGCCSSC--HHHHHHH---HCTTH----HHHHHHHHTSTTTTTTC
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhcCCCCCCHHHHHHhh--HHHHHHH---HhHHH----HHHHHHHHHhcCccccC
Confidence 489999999999999999999999887 4431 11111111 1111111 11111 12222222222 3456
Q ss_pred ccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcC
Q 023578 143 QIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGD 221 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGD 221 (280)
.++||+.++|+.|+++ |++++|+||+....++..++.+|+ |+.++++ .+++++|++|++|++|||
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~~-------------~~~~~~~~~~~~~~~vgD 138 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLGP-------------QFVERIILTRDKTVVLGD 138 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHCH-------------HHHTTEEECSCGGGBCCS
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcCH-------------HHHHHcCCCcccEEEECC
Confidence 8999999999999999 999999999998888889999998 8877764 278999999999999999
Q ss_pred Cchhh----HHHHH-HcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH-HHHHHHHHh
Q 023578 222 SLKDD----VACGK-RAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL-TEVLSILEA 274 (280)
Q Consensus 222 s~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~-~dl~~~l~~ 274 (280)
+. .| +.+|+ ++|+.+|++.++.+ .. .. ......++.++ .++.++|+.
T Consensus 139 s~-~dD~~~i~~A~~~aG~~~i~~~~~~~--~~-~~--~~~~~~~v~~~~~~~~~~~~~ 191 (193)
T 2i7d_A 139 LL-IDDKDTVRGQEETPSWEHILFTCCHN--RH-LV--LPPTRRRLLSWSDNWREILDS 191 (193)
T ss_dssp EE-EESSSCCCSSCSSCSSEEEEECCGGG--TT-CC--CCTTSCEECSTTSCHHHHHHT
T ss_pred ch-hhCcHHHhhcccccccceEEEEeccC--cc-cc--cccchHHHhhHHHHHHHHhhc
Confidence 99 99 99999 99999999985321 11 11 01223479999 667777653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=155.11 Aligned_cols=124 Identities=16% Similarity=0.239 Sum_probs=98.4
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC--CCCCCCChHHHHHHHHhcCCC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE--FRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~--~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
.......+.||+.++++.|+++|++++++||+....++.. +.+|+. ++.+...+ ....+|.+.....+++++ +
T Consensus 73 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~ 149 (201)
T 4ap9_A 73 RTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--R 149 (201)
T ss_dssp HGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--T
T ss_pred HHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--C
Confidence 3445668999999999999999999999999988888888 889987 34343322 112456665667788888 8
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
+++|++|||+. +|+++|+++|+.+++ .+ +.. .+++++.++.|+.++|+++.
T Consensus 150 ~~~~i~iGD~~-~Di~~~~~ag~~v~~-~~----~~~-------~ad~v~~~~~el~~~l~~l~ 200 (201)
T 4ap9_A 150 DGFILAMGDGY-ADAKMFERADMGIAV-GR----EIP-------GADLLVKDLKELVDFIKNLK 200 (201)
T ss_dssp TSCEEEEECTT-CCHHHHHHCSEEEEE-SS----CCT-------TCSEEESSHHHHHHHHHTCC
T ss_pred cCcEEEEeCCH-HHHHHHHhCCceEEE-CC----CCc-------cccEEEccHHHHHHHHHHhh
Confidence 99999999999 999999999997544 32 111 78999999999999998874
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=153.81 Aligned_cols=96 Identities=9% Similarity=-0.048 Sum_probs=83.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccc-------eeeC----CCCCCCCChHHHHHHHHhc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSP-------ALSR----EFRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~-------v~~~----~~~~~Kp~~~~~~~~~~~l 209 (280)
.++||+.++|+.|+++|++++|+||+....++.+++.+|+. +.. ++++ ....+++|+..++.+++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~ 171 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM 171 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999986 222 1221 2334677888999999999
Q ss_pred C---CCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 210 E---VQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 210 g---i~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
| ++|++|++|||+. +|+.+++.+|+.++.
T Consensus 172 ~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 172 GLALGDFAESYFYSDSV-NDVPLLEAVTRPIAA 203 (232)
T ss_dssp TCCGGGSSEEEEEECCG-GGHHHHHHSSEEEEE
T ss_pred CCCcCchhheEEEeCCH-hhHHHHHhCCCeEEE
Confidence 9 9999999999999 999999999998765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-22 Score=167.17 Aligned_cols=125 Identities=17% Similarity=0.086 Sum_probs=94.3
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHH--HHH-HHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA--VDL-FHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~--~~~-~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
...++|++.++++.|+ +|+++ ++||..... ... +.+..++. |+.+++++ .+.+||+|.+|+.+++++|++|+
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 201 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKE 201 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGG
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHH
Confidence 3457899999999997 88997 899977632 111 11222222 67776655 56889999999999999999999
Q ss_pred cEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 215 EVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 215 ~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
+|++|||+ . +|+.+|+++|+.+++|.++.. ...++......||++++++.|+.
T Consensus 202 ~~~~vGD~~~-~Di~~a~~aG~~~i~v~~g~~-~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 202 QVIMVGDNYE-TDIQSGIQNGIDSLLVTSGFT-PKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp GEEEEESCTT-THHHHHHHHTCEEEEETTSSS-CSSSTTTCSSCCSEEESSGGGCC
T ss_pred HEEEECCCcH-HHHHHHHHcCCcEEEECCCCC-CHHHHHhcCCCCCEEEecHHHHh
Confidence 99999999 7 999999999999999986322 12222221237999999998864
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-21 Score=152.08 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=92.7
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
+|+.|+++|++++|+||.....++.+++.+|+. ++.+ .|||+..++.+++++|++++++++|||+. +|+.++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~-nD~~~~ 118 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHG----IDRKDLALKQWCEEQGIAPERVLYVGNDV-NDLPCF 118 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeC----CCChHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHH
Confidence 899999999999999999999999999999985 4443 29999999999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC------HHHHHHHHHhc
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS------LTEVLSILEAN 275 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~------~~dl~~~l~~~ 275 (280)
+++|+.+++. ++..... ..+++++.+ +.++.++|..-
T Consensus 119 ~~ag~~v~~~-----~~~~~~~---~~ad~v~~~~~~~g~~~~l~~~l~~~ 161 (176)
T 3mmz_A 119 ALVGWPVAVA-----SAHDVVR---GAARAVTTVPGGDGAIREIASWILGP 161 (176)
T ss_dssp HHSSEEEECT-----TCCHHHH---HHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHCCCeEECC-----ChhHHHH---HhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 9999876642 2333333 378999999 88888877543
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-22 Score=153.97 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=88.8
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~ 228 (280)
+++.|+++|++++++||+....++..++.+|+. |+. .||++..++.+++++|++|++|+||||+. +|+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~--------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~ 109 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG--------VVDKLSAAEELCNELGINLEQVAYIGDDL-NDAK 109 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS--------CSCHHHHHHHHHHHHTCCGGGEEEECCSG-GGHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc--------cCChHHHHHHHHHHcCCCHHHEEEECCCH-HHHH
Confidence 799999999999999999999999999999986 332 39999999999999999999999999999 9999
Q ss_pred HHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC------HHHHHHHH
Q 023578 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS------LTEVLSIL 272 (280)
Q Consensus 229 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~------~~dl~~~l 272 (280)
+|+++|+.+++.+ +....+ ..+++++.+ +.++.+.+
T Consensus 110 ~~~~ag~~~~~~~-----~~~~~~---~~ad~v~~~~~~~g~~~e~~~~l 151 (164)
T 3e8m_A 110 LLKRVGIAGVPAS-----APFYIR---RLSTIFLEKRGGEGVFREFVEKV 151 (164)
T ss_dssp HHTTSSEEECCTT-----SCHHHH---TTCSSCCCCCTTTTHHHHHHHHH
T ss_pred HHHHCCCeEEcCC-----hHHHHH---HhCcEEeccCCCCcHHHHHHHHH
Confidence 9999999877532 333333 478999988 66665554
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=149.26 Aligned_cols=98 Identities=9% Similarity=0.108 Sum_probs=88.2
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCc-hHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNI-KEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~-~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....+.||+.++|+.|+++|++++++||+. ...++..++.+|+. |+.++.. .+|++..|..+++++|++|++|
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~----~~~k~~~~~~~~~~~~~~~~~~ 140 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY----PGSKITHFERLQQKTGIPFSQM 140 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES----SSCHHHHHHHHHHHHCCCGGGE
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE----eCchHHHHHHHHHHcCCChHHE
Confidence 356789999999999999999999999998 68899999999987 7765432 2578899999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
++|||+. +|+++|+++|+.++++.+
T Consensus 141 ~~igD~~-~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 141 IFFDDER-RNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp EEEESCH-HHHHHHHTTTCEEEECSS
T ss_pred EEEeCCc-cChHHHHHcCCEEEEECC
Confidence 9999999 999999999999999975
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-21 Score=150.15 Aligned_cols=117 Identities=10% Similarity=0.078 Sum_probs=93.2
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCc
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSL 223 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~ 223 (280)
..|+..++|+.|+++|++++++||+....++..++.+|+. .++.+ +||++..++.+++++|++|+++++|||+.
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 110 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE--EIYTG----SYKKLEIYEKIKEKYSLKDEEIGFIGDDV 110 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC--EEEEC----C--CHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH--hhccC----CCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 3466789999999999999999999999999999999976 22221 69999999999999999999999999999
Q ss_pred hhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH---HHHHHHhc
Q 023578 224 KDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE---VLSILEAN 275 (280)
Q Consensus 224 ~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d---l~~~l~~~ 275 (280)
+|+.+|+++|+.+++.+ +..... ..+++++.++.+ +.++++.+
T Consensus 111 -~Di~~a~~ag~~~~~~~-----~~~~~~---~~a~~v~~~~~~~g~~~~~~~~~ 156 (162)
T 2p9j_A 111 -VDIEVMKKVGFPVAVRN-----AVEEVR---KVAVYITQRNGGEGALREVAELI 156 (162)
T ss_dssp -GGHHHHHHSSEEEECTT-----SCHHHH---HHCSEECSSCSSSSHHHHHHHHH
T ss_pred -HHHHHHHHCCCeEEecC-----ccHHHH---hhCCEEecCCCCCcHHHHHHHHH
Confidence 99999999999877532 233333 368999999765 33444443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-21 Score=154.95 Aligned_cols=107 Identities=15% Similarity=0.140 Sum_probs=90.4
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~ 228 (280)
+|+.|+++|++++++||.....++.+++.+|+. |+.+ ++||+.++.+++++|+++++|++|||+. +|+.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~--------~~K~~~~~~~~~~~g~~~~~~~~vGD~~-nDi~ 124 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR--------EDKLVVLDKLLAELQLGYEQVAYLGDDL-PDLP 124 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC--------SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc--------CChHHHHHHHHHHcCCChhHEEEECCCH-HHHH
Confidence 899999999999999999999999999999986 4432 7778999999999999999999999999 9999
Q ss_pred HHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC------HHHHHHHHHh
Q 023578 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS------LTEVLSILEA 274 (280)
Q Consensus 229 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~------~~dl~~~l~~ 274 (280)
+++++|+.+++. .+..... ..+++++.+ +.++.+.|..
T Consensus 125 ~~~~ag~~~~~~-----~~~~~~~---~~ad~v~~~~~~~G~~~~l~~~l~~ 168 (189)
T 3mn1_A 125 VIRRVGLGMAVA-----NAASFVR---EHAHGITRAQGGEGAAREFCELILS 168 (189)
T ss_dssp HHHHSSEEEECT-----TSCHHHH---HTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHCCCeEEeC-----CccHHHH---HhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999976542 2333333 378999998 6777776653
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-21 Score=155.44 Aligned_cols=106 Identities=19% Similarity=0.202 Sum_probs=89.2
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~ 228 (280)
+|+.|+++|++++|+||.....++.+++.+|+. |+.+ |||++.++.+++++|+++++|++|||+. +|++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~--------k~K~~~l~~~~~~lg~~~~~~~~vGDs~-nDi~ 154 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ--------SDKLVAYHELLATLQCQPEQVAYIGDDL-IDWP 154 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC--------SSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc--------CChHHHHHHHHHHcCcCcceEEEEcCCH-HHHH
Confidence 899999999999999999999999999999986 4432 8999999999999999999999999999 9999
Q ss_pred HHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH------HHHHHHHH
Q 023578 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL------TEVLSILE 273 (280)
Q Consensus 229 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~------~dl~~~l~ 273 (280)
+++++|+.++..+ +....+ ..+++++.+. .|+.+.|.
T Consensus 155 ~~~~ag~~~a~~~-----~~~~~~---~~Ad~v~~~~~~~G~v~e~~~~ll 197 (211)
T 3ij5_A 155 VMAQVGLSVAVAD-----AHPLLL---PKAHYVTRIKGGRGAVREVCDLIL 197 (211)
T ss_dssp HHTTSSEEEECTT-----SCTTTG---GGSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHCCCEEEeCC-----ccHHHH---hhCCEEEeCCCCCcHHHHHHHHHH
Confidence 9999999766532 222333 4899999885 56666554
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-22 Score=159.33 Aligned_cols=178 Identities=17% Similarity=0.163 Sum_probs=125.5
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCch---HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHh-cCCCc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDE---YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQ-GLDRL 142 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 142 (280)
++|+|+|||||||+|+...+..++++.+.... ...++ +....+.+.. +..+..+... ..|.+. .....
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~ 74 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRR--GFWVSEQYGR---LRPGLSEKAI---SIWESKNFFFEL 74 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCC--SSCHHHHHHH---HSTTHHHHHH---HHHTSTTTTTTC
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcCCCCCHHHhc--CCcHHHHHHh---cCHHHHHHHH---HHHHhhhhhhcC
Confidence 46899999999999999999999998864321 11111 1122222221 2222222222 222221 23457
Q ss_pred ccCcCHHHHHHHhhhC-CCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 143 QIMPGTAQLCGFLDSK-KIRRGLITRNIKEAVDLFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~-g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
.++||+.++|+.|+++ |++++|+||+....++..++++|+. |+ ..+++++|++|++|++
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~-----------------~~~~~~l~~~~~~~~~ 137 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-----------------PDFLEQIVLTRDKTVV 137 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC-----------------GGGGGGEEECSCSTTS
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch-----------------HHHHHHhccCCccEEE
Confidence 8999999999999999 9999999999888777788888764 32 5688899999999999
Q ss_pred EcCCchhh----HHHHH-HcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH-HHHHHHHHhc
Q 023578 219 VGDSLKDD----VACGK-RAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL-TEVLSILEAN 275 (280)
Q Consensus 219 iGDs~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~-~dl~~~l~~~ 275 (280)
|||+. .| +.+|+ ++|+.+|+++++.+ .. .. ......++.++ .++.++|+..
T Consensus 138 vgDs~-~dD~~~~~~a~~~aG~~~i~~~~~~~--~~-~~--~~~~~~~v~~~~~~l~~~l~~~ 194 (197)
T 1q92_A 138 SADLL-IDDRPDITGAEPTPSWEHVLFTACHN--QH-LQ--LQPPRRRLHSWADDWKAILDSK 194 (197)
T ss_dssp CCSEE-EESCSCCCCSCSSCSSEEEEECCTTT--TT-CC--CCTTCEEECCTTSCHHHHHHTT
T ss_pred ECccc-ccCCchhhhcccCCCceEEEecCccc--cc-cc--ccccchhhhhHHHHHHHHhccc
Confidence 99999 99 99999 99999999986322 21 11 11234579999 5899988844
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=161.40 Aligned_cols=127 Identities=18% Similarity=0.271 Sum_probs=103.7
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccce-----------eeCCCCCCCCChHHHHHHH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPA-----------LSREFRPYKPDPGPLLHIC 206 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v-----------~~~~~~~~Kp~~~~~~~~~ 206 (280)
....++||+.++++.|+++|++++++||+....++.+++.+|+. |+.. +.++...+||+++.++.++
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~ 254 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA 254 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence 45679999999999999999999999999999999999999987 3322 2235667899999999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHHhcc
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILEANF 276 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~~~~ 276 (280)
+++|+++++|++|||+. +|+.|++++|+.+++ + +....+ ..+++++ .++.++..+|+..+
T Consensus 255 ~~lgi~~~~~v~vGDs~-nDi~~a~~aG~~va~-~-----~~~~~~---~~a~~v~~~~~l~~v~~~L~~~l 316 (335)
T 3n28_A 255 QQYDVEIHNTVAVGDGA-NDLVMMAAAGLGVAY-H-----AKPKVE---AKAQTAVRFAGLGGVVCILSAAL 316 (335)
T ss_dssp HHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE-S-----CCHHHH---TTSSEEESSSCTHHHHHHHHHHH
T ss_pred HHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEe-C-----CCHHHH---hhCCEEEecCCHHHHHHHHHhHH
Confidence 99999999999999999 999999999998877 3 222333 3566665 46677777776543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.5e-22 Score=164.58 Aligned_cols=127 Identities=22% Similarity=0.289 Sum_probs=94.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHH---HHHHcCCc--ccceeeCC--CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDL---FHNRFGIT--FSPALSRE--FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~---~l~~~g~~--fd~v~~~~--~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.++|++.+.++.+ ..|+++ ++||........ .++..++. |+.+++.+ ...+||++.+++.+++++|++|++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e 214 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER 214 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence 4578889999999 788998 889865432111 11122222 56655544 468899999999999999999999
Q ss_pred EEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 216 VMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 216 ~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
|++|||+ . +|++||+++|+.+++|.++. ....+.......++++++++.|+.++|+
T Consensus 215 ~i~iGD~~~-nDi~~a~~aG~~~i~v~~g~-~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 215 MAMVGDRLY-TDVKLGKNAGIVSILVLTGE-TTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp EEEEESCHH-HHHHHHHHHTCEEEEESSSS-CCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred EEEECCCcH-HHHHHHHHcCCeEEEECCCC-CCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 9999999 7 99999999999999998632 1112222212489999999999998763
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-21 Score=154.41 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=77.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceee-C---CCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALS-R---EFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~-~---~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
.+.|++.++++.|+++|++++|+||+.....+..++.+.-.|+.++. . +.+..||+|+.|..+++++|+ |+|
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~ 163 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIF 163 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEE
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEE
Confidence 46789999999999999999999998765544444442111555422 2 234589999999999999998 999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCC
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETG 244 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~ 244 (280)
|||+. +|+++|+++|+.+|++.++.
T Consensus 164 VGDs~-~Di~aA~~aG~~~i~v~~g~ 188 (211)
T 2b82_A 164 YGDSD-NDITAARDVGARGIRILRAS 188 (211)
T ss_dssp EESSH-HHHHHHHHTTCEEEECCCCT
T ss_pred EECCH-HHHHHHHHCCCeEEEEecCC
Confidence 99999 99999999999999998643
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.82 E-value=6.3e-20 Score=154.77 Aligned_cols=116 Identities=15% Similarity=0.180 Sum_probs=94.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
...++||+.++|+.|+++|++++++||+....++..++.+|+. |+.++ |. ....++++++.. ++|++
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~--------~~--~K~~~~~~l~~~-~~~~~ 229 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL--------PH--QKSEEVKKLQAK-EVVAF 229 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC--------TT--CHHHHHHHHTTT-CCEEE
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC--------hH--HHHHHHHHHhcC-CeEEE
Confidence 4578999999999999999999999999999999999999986 55443 21 236788999999 99999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHHhcc
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILEANF 276 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~~~~ 276 (280)
|||+. +|+.+|+++|+.+ .+. ++.... ...+++++ .++.++.++|....
T Consensus 230 vGDs~-~Di~~a~~ag~~v-~~~----~~~~~~---~~~ad~v~~~~~~~~l~~~l~~~~ 280 (287)
T 3a1c_A 230 VGDGI-NDAPALAQADLGI-AVG----SGSDVA---VESGDIVLIRDDLRDVVAAIQLSR 280 (287)
T ss_dssp EECTT-TCHHHHHHSSEEE-EEC----CCSCCS---SCCSSEEESSSCTHHHHHHHHTTC
T ss_pred EECCH-HHHHHHHHCCeeE-EeC----CCCHHH---HhhCCEEEeCCCHHHHHHHHHHHH
Confidence 99999 9999999999974 433 222222 35899999 99999999887653
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-20 Score=157.27 Aligned_cols=83 Identities=20% Similarity=0.289 Sum_probs=67.6
Q ss_pred CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 192 FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 192 ~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
...+||++.+++.+++++|+++++|++|||+..+|++||+++|+.+++|.++. +...+.......+++++.++.|+.++
T Consensus 186 ~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~-~~~~~~~~~~~~~~~~~~~~~el~~~ 264 (271)
T 2x4d_A 186 EVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGK-FRPSDEHHPEVKADGYVDNLAEAVDL 264 (271)
T ss_dssp EEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTT-CCGGGGGCSSCCCSEEESSHHHHHHH
T ss_pred eeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCC-CCchhhcccCCCCCEEeCCHHHHHHH
Confidence 44689999999999999999999999999995599999999999999998631 22222221135799999999999998
Q ss_pred HHhc
Q 023578 272 LEAN 275 (280)
Q Consensus 272 l~~~ 275 (280)
|.+.
T Consensus 265 l~~~ 268 (271)
T 2x4d_A 265 LLQH 268 (271)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=149.63 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=90.1
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVA 228 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~ 228 (280)
.++.|+++|++++++||+....++..++.+|+. |+.+ ||++..++.+++++|++|+++++|||+. +|+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~--------kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~ 124 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ--------VDKRSAYQHLKKTLGLNDDEFAYIGDDL-PDLP 124 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC--------SSCHHHHHHHHHHHTCCGGGEEEEECSG-GGHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC--------CChHHHHHHHHHHhCCCHHHEEEECCCH-HHHH
Confidence 589999999999999999999999999999986 4432 9999999999999999999999999999 9999
Q ss_pred HHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC------HHHHHHHHHh
Q 023578 229 CGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS------LTEVLSILEA 274 (280)
Q Consensus 229 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~------~~dl~~~l~~ 274 (280)
+++++|+.+++ . .+..... ..+++++.+ +.++.+++..
T Consensus 125 ~~~~ag~~~~~-~----~~~~~~~---~~ad~v~~~~~~~g~~~~l~~~ll~ 168 (191)
T 3n1u_A 125 LIQQVGLGVAV-S----NAVPQVL---EFADWRTERTGGRGAVRELCDLILN 168 (191)
T ss_dssp HHHHSSEEEEC-T----TCCHHHH---HHSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHCCCEEEe-C----CccHHHH---HhCCEEecCCCCCcHHHHHHHHHHH
Confidence 99999998754 2 2333333 478999998 6667766643
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-20 Score=147.78 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=89.0
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
.++.|+++|++++|+||+....++.+++.+|+. .++. ..||++..++.+++++|+++++|++|||+. +|++++
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~--~~~~----~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~-nDi~~~ 132 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGIS--LIYQ----GQDDKVQAYYDICQKLAIAPEQTGYIGDDL-IDWPVM 132 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC--EEEC----SCSSHHHHHHHHHHHHCCCGGGEEEEESSG-GGHHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc--EEee----CCCCcHHHHHHHHHHhCCCHHHEEEEcCCH-HHHHHH
Confidence 589999999999999999999999999999986 2221 129999999999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH------HHHHHHHH
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL------TEVLSILE 273 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~------~dl~~~l~ 273 (280)
+++|+.+++. ++....+ ..+++++.+. .++.++|.
T Consensus 133 ~~ag~~va~~-----na~~~~~---~~ad~v~~~~~~~G~~~~~~~~il 173 (195)
T 3n07_A 133 EKVALRVCVA-----DGHPLLA---QRANYVTHIKGGHGAVREVCDLIL 173 (195)
T ss_dssp TTSSEEEECT-----TSCHHHH---HHCSEECSSCTTTTHHHHHHHHHH
T ss_pred HHCCCEEEEC-----ChHHHHH---HhCCEEEcCCCCCCHHHHHHHHHH
Confidence 9999976652 2333333 4889999874 56666654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-19 Score=148.61 Aligned_cols=81 Identities=25% Similarity=0.293 Sum_probs=65.1
Q ss_pred CCCCCCChHHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHH
Q 023578 192 FRPYKPDPGPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLS 270 (280)
Q Consensus 192 ~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~ 270 (280)
...+||++.+++.+++++|++++++++|||+ . +|++||+++|+.+++++++. ....+.......||++++++.||.+
T Consensus 179 ~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~-~Di~~~~~aG~~~~~v~~g~-~~~~~~~~~~~~~d~v~~~~~el~~ 256 (266)
T 3pdw_A 179 VFIGKPESIIMEQAMRVLGTDVSETLMVGDNYA-TDIMAGINAGMDTLLVHTGV-TKREHMTDDMEKPTHAIDSLTEWIP 256 (266)
T ss_dssp EECSTTSSHHHHHHHHHHTCCGGGEEEEESCTT-THHHHHHHHTCEEEEECCC-------CCTTSCCCSEEESSGGGGHH
T ss_pred cccCCCCHHHHHHHHHHcCCChhhEEEECCCcH-HHHHHHHHCCCeEEEECCCC-CChHHHHhcCCCCCEEeCCHHHHHH
Confidence 3468999999999999999999999999999 8 99999999999999998532 2222232212369999999999998
Q ss_pred HHHh
Q 023578 271 ILEA 274 (280)
Q Consensus 271 ~l~~ 274 (280)
-++.
T Consensus 257 ~~~~ 260 (266)
T 3pdw_A 257 YIEG 260 (266)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-19 Score=140.46 Aligned_cols=107 Identities=10% Similarity=0.006 Sum_probs=89.2
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCch
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~ 224 (280)
.++..++|+.|+++|++++++||.....++..++.+|+. .++. ..||++..++.+++++|++|+++++|||+.
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~--~~~~----~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~- 109 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFL----GKLEKETACFDLMKQAGVTAEQTAYIGDDS- 109 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEE----SCSCHHHHHHHHHHHHTCCGGGEEEEECSG-
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc--eeec----CCCCcHHHHHHHHHHcCCCHHHEEEECCCH-
Confidence 345568999999999999999999999999999999986 2222 248999999999999999999999999999
Q ss_pred hhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHH
Q 023578 225 DDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLT 266 (280)
Q Consensus 225 ~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~ 266 (280)
+|+.+++++|+.+++. ++..... ..+++++.+..
T Consensus 110 ~Di~~~~~ag~~~~~~-----~~~~~~~---~~ad~v~~~~~ 143 (180)
T 1k1e_A 110 VDLPAFAACGTSFAVA-----DAPIYVK---NAVDHVLSTHG 143 (180)
T ss_dssp GGHHHHHHSSEEEECT-----TSCHHHH---TTSSEECSSCT
T ss_pred HHHHHHHHcCCeEEeC-----CccHHHH---hhCCEEecCCC
Confidence 9999999999987753 2333333 47999999863
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-19 Score=158.13 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=113.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc--ceeeCC-CC-----------CCCCChHHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS--PALSRE-FR-----------PYKPDPGPLLH 204 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd--~v~~~~-~~-----------~~Kp~~~~~~~ 204 (280)
...++||+.++|+.|+++|++++|+||+....++..++.+|+. |+ .+++++ .. .+||+|++|..
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence 3477899999999999999999999999999999999999997 88 788765 32 48999999999
Q ss_pred HHHhcC--------------CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC--CccccccCCCCCCEEEcCHHHH
Q 023578 205 ICSTWE--------------VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY--SADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 205 ~~~~lg--------------i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~d~v~~~~~dl 268 (280)
+++++| ++|++|++|||+. +|+.+|+++||.+|++.++... ...+.. ..+++++++++.|+
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~-~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~--~~~ad~vi~sl~eL 369 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGLKGKDAAGELE--AHHADYVINHLGEL 369 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCBTTBGGGHHHHH--HTTCSEEESSGGGH
T ss_pred HHHHcCCccccccccccccCCCCcCeEEEcCCH-HHHHHHHHcCCEEEEECCCccccccHHHHh--hcCCCEEECCHHHH
Confidence 999999 8999999999999 9999999999999999853210 011221 25899999999999
Q ss_pred HHHHHhccC
Q 023578 269 LSILEANFD 277 (280)
Q Consensus 269 ~~~l~~~~~ 277 (280)
.++|.....
T Consensus 370 ~~~l~~~~~ 378 (384)
T 1qyi_A 370 RGVLDNLLE 378 (384)
T ss_dssp HHHHSCTTT
T ss_pred HHHHHHHHh
Confidence 999876554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-21 Score=163.64 Aligned_cols=132 Identities=22% Similarity=0.274 Sum_probs=98.8
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHH--H-HHHHHcC-Cc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCC
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV--D-LFHNRFG-IT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~--~-~~l~~~g-~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
..++|++.++++.|++.|+ ++++||...... . ..+..+| +. |+.+++.+ ...+||+|.+|+.+++++|++|+
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence 3457899999999999998 999999875433 1 2222333 22 66666655 56899999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccc------CCCCCCEEEcCHHHHHHHHHhc
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTK------SNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~------~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
+|++|||+..+|+++|+++|+.+++|.++. ....+... ....|++++.++.||.+++++-
T Consensus 234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~-~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~~~ 299 (306)
T 2oyc_A 234 RTLMVGDRLETDILFGHRCGMTTVLTLTGV-SRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLEDE 299 (306)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSS-CCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC---
T ss_pred HEEEECCCchHHHHHHHHCCCeEEEECCCC-CCHHHHHhhhcccccCCCCCEEECCHHHHHHHHHhh
Confidence 999999993399999999999999998632 22222210 1258999999999998877653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-20 Score=157.09 Aligned_cols=128 Identities=20% Similarity=0.134 Sum_probs=96.4
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHH--HHHHHH-cCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV--DLFHNR-FGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~--~~~l~~-~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
..++|++.++++.|+ +|+++ ++||...... ...+.. .++. |+.+++++ ...+||+|.+|+.++++ ++|++
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~ 204 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE 204 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence 456899999999999 89998 9999876443 122222 2232 67777655 56899999999999999 89999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
++||||+..+|+.+|+++|+.+++|.++ .....+.......++++++++.|+.++|++
T Consensus 205 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g-~~~~~~~~~~~~~p~~~~~~l~el~~~l~~ 262 (263)
T 1zjj_A 205 LWMVGDRLDTDIAFAKKFGMKAIMVLTG-VSSLEDIKKSEYKPDLVLPSVYELIDYLKT 262 (263)
T ss_dssp EEEEESCTTTHHHHHHHTTCEEEEESSS-SCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred EEEECCChHHHHHHHHHcCCeEEEECCC-CCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence 9999999439999999999999999852 222222222123799999999999887654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=8e-19 Score=146.28 Aligned_cols=78 Identities=28% Similarity=0.376 Sum_probs=64.0
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccc----cCCCCCCEEEcCHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFT----KSNLQPDFRVSSLTEV 268 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~----~~~~~~d~v~~~~~dl 268 (280)
.+||++.+++.+++++|++++++++|||+ . +|+.+|+++|+.+++|.++... ..+.. .....|+++++++.||
T Consensus 185 ~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~-~Di~~~~~~g~~~~~v~~g~~~-~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 185 VGKPSEVIMREALDILGLDAKDVAVVGDQID-VDVAAGKAIGAETVLVLTGVTT-RENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp CSTTSHHHHHHHHHHHTCCGGGEEEEESCTT-THHHHHHHHTCEEEEESSSSCC-TTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred cCCCCHHHHHHHHHHhCCCchhEEEECCCch-HHHHHHHHCCCcEEEECCCCCC-HHHHHhhccccCCCCCEEECCHHHH
Confidence 58999999999999999999999999999 7 9999999999999999863222 11221 1124799999999999
Q ss_pred HHHHH
Q 023578 269 LSILE 273 (280)
Q Consensus 269 ~~~l~ 273 (280)
.++|+
T Consensus 263 ~~~l~ 267 (268)
T 3qgm_A 263 VEALE 267 (268)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 98764
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-19 Score=159.42 Aligned_cols=99 Identities=16% Similarity=0.197 Sum_probs=87.5
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCc------------hHHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNI------------KEAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~------------~~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
.++||+.++|+.|+++|++++|+||.. ...++..++.+|+.|+.+++++ ...+||+|.+|..+++++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l 166 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQA 166 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSTTSTTSSHHHHHHHHHS
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCCHHHHHHHHHHh
Confidence 379999999999999999999999965 2237788899999999888865 778999999999999999
Q ss_pred C----CCCCcEEEEcCCc----------------hhhHHHHHHcCCcEEEEc
Q 023578 210 E----VQPNEVMMVGDSL----------------KDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 210 g----i~~~~~v~iGDs~----------------~~Di~~a~~~G~~~i~v~ 241 (280)
| ++|++|+||||+. ..|+.+|+++|+.++...
T Consensus 167 ~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 167 NEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp STTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred CCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 8 9999999999995 379999999999987543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9.1e-20 Score=144.25 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=84.9
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
+|+.|+++|++++++||+....++..++.+|+. .++. ..||++..++.+++++|++|++++||||+. +|+.++
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~--~~~~----~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~-~Di~~a 133 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGIT--HLYQ----GQSNKLIAFSDLLEKLAIAPENVAYVGDDL-IDWPVM 133 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC--EEEC----SCSCSHHHHHHHHHHHTCCGGGEEEEESSG-GGHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc--eeec----CCCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHH
Confidence 899999999999999999999999999999975 2222 259999999999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL 265 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~ 265 (280)
+++|+.+++.+ +..... ..+++++.+.
T Consensus 134 ~~ag~~~~~~~-----~~~~~~---~~ad~v~~~~ 160 (188)
T 2r8e_A 134 EKVGLSVAVAD-----AHPLLI---PRADYVTRIA 160 (188)
T ss_dssp TTSSEEEECTT-----SCTTTG---GGSSEECSSC
T ss_pred HHCCCEEEecC-----cCHHHH---hcCCEEEeCC
Confidence 99999876532 222333 3689999997
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-20 Score=158.05 Aligned_cols=120 Identities=21% Similarity=0.287 Sum_probs=92.4
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCchHHH--H--HHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhc----CCCCCc
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNIKEAV--D--LFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTW----EVQPNE 215 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~~~~~--~--~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~l----gi~~~~ 215 (280)
...++++.|+++|++ +++||...... + .+++..++. |+.+++++ ...+||+|.+|+.+++++ |++|++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~ 227 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE 227 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence 556677789999999 99999876544 2 112344544 78887766 678899999999999999 999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccc----cCCCCCCEEEcCHHHH
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT----KSNLQPDFRVSSLTEV 268 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~----~~~~~~d~v~~~~~dl 268 (280)
|+||||+..+|+.+|+++|+.+++|.++. ....+.. .....|+++++++.||
T Consensus 228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~-~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 228 ILMVGDTLHTDILGGNKFGLDTALVLTGN-TRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSS-SCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCC-CCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999993399999999999999998632 2222222 1125899999998875
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=142.51 Aligned_cols=75 Identities=23% Similarity=0.289 Sum_probs=62.0
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDS-LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs-~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
..+||++.+++.+++++|++++++++|||+ . +|+.+|+++|+.+++|.++.. ...+.......||++++++.||.
T Consensus 179 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~-~Di~~a~~aG~~~~~v~~g~~-~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 179 FIGKPNAIIMNKALEILNIPRNQAVMVGDNYL-TDIMAGINNDIDTLLVTTGFT-TVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTT-THHHHHHHHTCEEEEETTSSS-CGGGGGGCSSCCSEEESCGGGCC
T ss_pred cCCCCCHHHHHHHHHHhCcCcccEEEECCCcH-HHHHHHHHCCCeEEEECCCCC-ChHHHHhcCCCCCEEECCHHHHh
Confidence 468999999999999999999999999999 7 999999999999999985322 22233321248999999999874
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-19 Score=139.46 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=79.7
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
.|+.|+++|++++|+||. ..++..++.+++.++ ++.+ .++|+..++.+++++|++|+++++|||+. +|+.++
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~~g----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~-nDi~~~ 115 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TEVS----VSDKLATVDEWRKEMGLCWKEVAYLGNEV-SDEECL 115 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EECS----CSCHHHHHHHHHHHTTCCGGGEEEECCSG-GGHHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EEEC----CCChHHHHHHHHHHcCcChHHEEEEeCCH-hHHHHH
Confidence 689999999999999999 667888884333334 4332 36889999999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL 265 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~ 265 (280)
+.+|+.+++ . ++.+..+ ..+++++.+.
T Consensus 116 ~~ag~~~a~-~----na~~~~k---~~Ad~v~~~~ 142 (168)
T 3ewi_A 116 KRVGLSAVP-A----DACSGAQ---KAVGYICKCS 142 (168)
T ss_dssp HHSSEEEEC-T----TCCHHHH---TTCSEECSSC
T ss_pred HHCCCEEEe-C----ChhHHHH---HhCCEEeCCC
Confidence 999998664 2 3333444 4899999874
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-18 Score=133.46 Aligned_cols=167 Identities=11% Similarity=0.031 Sum_probs=109.1
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCch-HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDE-YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (280)
.|+|+|||||||+|+...+..++++.+|.+. ...+. +...... + ....+ .....+ +.........++|
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~~--g~~~~~~---~-~~~~~---~~~~~~--~~~~~~~~~~~~p 72 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLN--GKKLKHM---I-PEHEG---LVMDIL--KEPGFFRNLDVMP 72 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGCT--TCCC------------C---HHHHHH--HSTTGGGSCCBCT
T ss_pred ccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHHc--CccHHHH---C-CchHH---HHHHHH--hCcchhccCCCCc
Confidence 5899999999999999988888888767653 11111 2111111 1 00111 111111 1112334578999
Q ss_pred CHHHHHHHhhhCCCeEEEEeCC---chH--HHHHHHHH-cCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 147 GTAQLCGFLDSKKIRRGLITRN---IKE--AVDLFHNR-FGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~---~~~--~~~~~l~~-~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
|+.++|+.|+++ ++++|+||. ... .....++. ++.. ++.+++++.. ++ ++|++
T Consensus 73 g~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~--------------~l----~~~l~ 133 (180)
T 3bwv_A 73 HAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN--------------II----LADYL 133 (180)
T ss_dssp THHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG--------------GB----CCSEE
T ss_pred CHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC--------------ee----cccEE
Confidence 999999999985 999999998 321 22334444 5544 5667776541 12 67899
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|||+. +|++ .++| .+++++++ +.. ...+++++.++.|+..+|.++.
T Consensus 134 ieDs~-~~i~--~aaG-~~i~~~~~--~~~------~~~~~~~i~~~~el~~~l~~~~ 179 (180)
T 3bwv_A 134 IDDNP-KQLE--IFEG-KSIMFTAS--HNV------YEHRFERVSGWRDVKNYFNSIE 179 (180)
T ss_dssp EESCH-HHHH--HCSS-EEEEECCG--GGT------TCCSSEEECSHHHHHHHHHHHC
T ss_pred ecCCc-chHH--HhCC-CeEEeCCC--ccc------CCCCceecCCHHHHHHHHHHhh
Confidence 99999 9985 5689 99999742 211 1378899999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-18 Score=142.27 Aligned_cols=112 Identities=18% Similarity=0.248 Sum_probs=89.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVG 220 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iG 220 (280)
.++||+.++++.|+++|++++++||.....++..++.+|+. |+.+++.+ +....+...+.+ ++++||
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~------k~~~~k~~~~~~-----~~~~vG 212 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE------KAEKVKEVQQKY-----VTAMVG 212 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG------HHHHHHHHHTTS-----CEEEEE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH------HHHHHHHHHhcC-----CEEEEe
Confidence 68899999999999999999999999999999999999987 66665542 334455555544 789999
Q ss_pred CCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHHh
Q 023578 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILEA 274 (280)
Q Consensus 221 Ds~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~~ 274 (280)
|+. +|++|++++|+.+++- ++..... ..+++++ .++.++.++|+.
T Consensus 213 D~~-nDi~~~~~Ag~~va~~-----~~~~~~~---~~a~~~~~~~~~~~l~~~l~~ 259 (280)
T 3skx_A 213 DGV-NDAPALAQADVGIAIG-----AGTDVAV---ETADIVLVRNDPRDVAAIVEL 259 (280)
T ss_dssp CTT-TTHHHHHHSSEEEECS-----CCSSSCC---CSSSEECSSCCTHHHHHHHHH
T ss_pred CCc-hhHHHHHhCCceEEec-----CCcHHHH---hhCCEEEeCCCHHHHHHHHHH
Confidence 999 9999999999755542 2333333 4788888 999999998874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-19 Score=151.91 Aligned_cols=126 Identities=12% Similarity=0.110 Sum_probs=100.0
Q ss_pred ccCcCHHHHHHHhhhC-CCeEEEEeCC---------------------chHHHHHHHHHcCCc--ccce----------e
Q 023578 143 QIMPGTAQLCGFLDSK-KIRRGLITRN---------------------IKEAVDLFHNRFGIT--FSPA----------L 188 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~-g~~i~ivS~~---------------------~~~~~~~~l~~~g~~--fd~v----------~ 188 (280)
.+.+++.++++.++++ |+++++.|+. ....+...++.+|+. |..+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 5678999999999988 9999999976 455667777888876 3322 3
Q ss_pred eCC-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH
Q 023578 189 SRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267 (280)
Q Consensus 189 ~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d 267 (280)
+.+ ...+++|+..++.+++++|+++++|++|||+. +|+.+++.+|+.+++ +++..+.+. .+++++.+..+
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~-~D~~~~~~ag~~~~~-----~~~~~~~~~---~a~~v~~~~~~ 272 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSG-NDVRMLQTVGNGYLL-----KNATQEAKN---LHNLITDSEYS 272 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHTTSSEEEEC-----TTCCHHHHH---HCCCBCSSCHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCH-HHHHHHHhCCcEEEE-----CCccHHHHH---hCCEEcCCCCc
Confidence 333 45778999999999999999999999999999 999999999976554 234334443 68999999887
Q ss_pred --HHHHHHhccC
Q 023578 268 --VLSILEANFD 277 (280)
Q Consensus 268 --l~~~l~~~~~ 277 (280)
+.+.|++++.
T Consensus 273 ~gv~~~~~~~~~ 284 (289)
T 3gyg_A 273 KGITNTLKKLIG 284 (289)
T ss_dssp HHHHHHHHHHTC
T ss_pred CHHHHHHHHHHH
Confidence 8888887765
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.71 E-value=7e-18 Score=141.86 Aligned_cols=110 Identities=16% Similarity=0.180 Sum_probs=81.1
Q ss_pred hCCCeEEEEe-C-CchHHHHHHHHHcCCcccceeeCC-----CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHH
Q 023578 157 SKKIRRGLIT-R-NIKEAVDLFHNRFGITFSPALSRE-----FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVAC 229 (280)
Q Consensus 157 ~~g~~i~ivS-~-~~~~~~~~~l~~~g~~fd~v~~~~-----~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~ 229 (280)
+..+++.++. . ......+.+.+.++-.+..+.++. ...+.+|+.+++.+++++|++++++++|||+. ||++|
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~-NDi~m 242 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNL-NDIEM 242 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHH
Confidence 5678888883 2 222223444455553344444433 23566788999999999999999999999999 99999
Q ss_pred HHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhc
Q 023578 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEAN 275 (280)
Q Consensus 230 a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~ 275 (280)
++.+|+.+++ +++.++.++ .|++|+.+.++ +...|+++
T Consensus 243 l~~ag~~vam-----~na~~~~k~---~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 243 LQNAGISYAV-----SNARQEVIA---AAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHSSEEEEE-----TTSCHHHHH---HSSEEECCGGGTHHHHHHHHT
T ss_pred HHhCCCEEEc-----CCCCHHHHH---hcCeECCCCCCChHHHHHHHh
Confidence 9999987776 355555554 89999999988 88888765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.4e-17 Score=138.11 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=63.8
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLS 270 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~ 270 (280)
..+.+|+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++.++.++ .|++|+.+.++ +..
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~ag~~vam-----~na~~~~k~---~A~~v~~~~~e~Gv~~ 263 (279)
T 4dw8_A 193 PQGIDKALSLSVLLENIGMTREEVIAIGDGY-NDLSMIKFAGMGVAM-----GNAQEPVKK---AADYITLTNDEDGVAE 263 (279)
T ss_dssp CTTCCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC-----TTSCHHHHH---HCSEECCCGGGTHHHH
T ss_pred cCCCChHHHHHHHHHHcCCCHHHEEEECCCh-hhHHHHHHcCcEEEc-----CCCcHHHHH---hCCEEcCCCCCcHHHH
Confidence 3667889999999999999999999999999 999999999987665 345555554 79999999877 888
Q ss_pred HHHhccC
Q 023578 271 ILEANFD 277 (280)
Q Consensus 271 ~l~~~~~ 277 (280)
.|++++.
T Consensus 264 ~i~~~~~ 270 (279)
T 4dw8_A 264 AIERIFN 270 (279)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 8887764
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-18 Score=145.40 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=95.9
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
....++||+.++|+.|+++|++++++||.....++.+++.+|+. |+.++ |..+..++++++.++++|+
T Consensus 133 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~----------p~~k~~~~~~l~~~~~~~~ 202 (263)
T 2yj3_A 133 ISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS----------PEDKVRIIEKLKQNGNKVL 202 (263)
Confidence 34578999999999999999999999999999999999999986 55443 3456789999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHHh
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILEA 274 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~~ 274 (280)
||||+. +|+.+++++|+.+++.+ +.... ...+|+++ +++.++.++++.
T Consensus 203 ~VGD~~-~D~~aa~~Agv~va~g~-----~~~~~---~~~ad~v~~~~~l~~l~~~l~~ 252 (263)
T 2yj3_A 203 MIGDGV-NDAAALALADVSVAMGN-----GVDIS---KNVADIILVSNDIGTLLGLIKN 252 (263)
Confidence 999999 99999999998765532 22222 24789999 999999887753
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=7.3e-17 Score=135.91 Aligned_cols=123 Identities=12% Similarity=0.082 Sum_probs=87.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc---CCcccceeeC----C-CCCCCCChHHHHHHHHhcCCCCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF---GITFSPALSR----E-FRPYKPDPGPLLHICSTWEVQPN 214 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~---g~~fd~v~~~----~-~~~~Kp~~~~~~~~~~~lgi~~~ 214 (280)
.+.+++.+++..+....+++.+ +... ...+.+.+.+ .-.+..+.++ + ...+.+|+.+++.+++++|++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~~-~~~~-~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 219 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIEV-YTEH-DIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD 219 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEEE-ECCG-GGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred cccCCHHHHHhcCCCCceEEEE-eCCH-HHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence 3456677777777777778755 3332 2334444432 1123434333 2 23667889999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhcc
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEANF 276 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~ 276 (280)
++++|||+. ||++|++.+|+.+++ +++.++.++ .|++++.+..+ +...|++++
T Consensus 220 ~~i~~GD~~-NDi~m~~~ag~~vam-----~na~~~~k~---~Ad~v~~s~~edGv~~~i~~~~ 274 (290)
T 3dnp_A 220 DVVAIGHQY-DDLPMIELAGLGVAM-----GNAVPEIKR---KADWVTRSNDEQGVAYMMKEYF 274 (290)
T ss_dssp GEEEEECSG-GGHHHHHHSSEEEEC-----TTSCHHHHH---HSSEECCCTTTTHHHHHHHHHH
T ss_pred HEEEECCch-hhHHHHHhcCCEEEe-----cCCcHHHHH---hcCEECCCCCccHHHHHHHHHH
Confidence 999999999 999999999997776 344445554 89999999888 777777654
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=8.4e-17 Score=134.25 Aligned_cols=105 Identities=10% Similarity=0.078 Sum_probs=78.9
Q ss_pred eEEEEeCCchHHHHHHHHHcCCcccceeeCC-------CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc
Q 023578 161 RRGLITRNIKEAVDLFHNRFGITFSPALSRE-------FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 161 ~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~-------~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
++.+. ......+.+.+.++..|+.+.++. ...+++|+.+++.+++++|++++++++|||+. ||++|++.+
T Consensus 159 ki~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~a 235 (274)
T 3fzq_A 159 KICLW--SNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQ-NDIVMFQAS 235 (274)
T ss_dssp EEEEE--CCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSG-GGHHHHHTC
T ss_pred EEEEE--cCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCCh-hHHHHHHhc
Confidence 44444 445556666666654444444432 34678899999999999999999999999999 999999999
Q ss_pred CCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhcc
Q 023578 234 GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEANF 276 (280)
Q Consensus 234 G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~ 276 (280)
|+.+++ +++.++.++ .|++++.+..| +...|+++.
T Consensus 236 g~~vam-----~na~~~~k~---~A~~v~~~~~edGv~~~l~~~~ 272 (274)
T 3fzq_A 236 DVTIAM-----KNSHQQLKD---IATSICEDIFDNGIYKELKRRN 272 (274)
T ss_dssp SEEEEE-----TTSCHHHHH---HCSEEECCGGGTHHHHHHHHTT
T ss_pred CceEEe-----cCccHHHHH---hhhheeCCCchhHHHHHHHHhC
Confidence 987776 345555554 79999999887 888887763
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.9e-17 Score=134.04 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=88.5
Q ss_pred cCHHHHHHHhh-hC-CCeE-----------EEEe-CCchHHHHHHHHHcCCcccceeeC----C-CCCCCCChHHHHHHH
Q 023578 146 PGTAQLCGFLD-SK-KIRR-----------GLIT-RNIKEAVDLFHNRFGITFSPALSR----E-FRPYKPDPGPLLHIC 206 (280)
Q Consensus 146 pg~~~~l~~L~-~~-g~~i-----------~ivS-~~~~~~~~~~l~~~g~~fd~v~~~----~-~~~~Kp~~~~~~~~~ 206 (280)
+.+.++++.++ +. |+.+ .+++ +.....++.+++.++-.|+.+ ++ + ...++||+.+++.++
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~ 162 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKAS 162 (231)
T ss_dssp SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHH
Confidence 55666666666 44 5443 5666 446677788888876336655 43 2 246899999999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhc
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEAN 275 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~ 275 (280)
+++|++++++++|||+. +|+++++.+|+.+ .+. ++..+.+ ..+++++.+..+ +.+.|+++
T Consensus 163 ~~~~~~~~~~~~iGD~~-nD~~~~~~ag~~v-~~~----~~~~~~~---~~a~~v~~~~~e~Gv~~~l~~~ 224 (231)
T 1wr8_A 163 EFLGIKPKEVAHVGDGE-NDLDAFKVVGYKV-AVA----QAPKILK---ENADYVTKKEYGEGGAEAIYHI 224 (231)
T ss_dssp HHHTSCGGGEEEEECSG-GGHHHHHHSSEEE-ECT----TSCHHHH---TTCSEECSSCHHHHHHHHHHHH
T ss_pred HHcCCCHHHEEEECCCH-HHHHHHHHcCCeE-Eec----CCCHHHH---hhCCEEecCCCcchHHHHHHHH
Confidence 99999999999999999 9999999999984 443 3444443 379999999876 66666654
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=135.09 Aligned_cols=102 Identities=13% Similarity=0.040 Sum_probs=87.5
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHH---HHHHHHH--------cCCcccceeeCCCCCCCCChHHHHHHHHh
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA---VDLFHNR--------FGITFSPALSREFRPYKPDPGPLLHICST 208 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~---~~~~l~~--------~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~ 208 (280)
....++||+.++|+.|+++|++++++||..... +...++. +|+.|+.+++++....||+|+++..++++
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 264 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeeccCCCCcHHHHHHHHHHHH
Confidence 356789999999999999999999999987543 3556667 88888888876655679999999999999
Q ss_pred cCCCCCc-EEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 209 WEVQPNE-VMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 209 lgi~~~~-~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
++.++.+ +++|||+. .|+++|+++|+.+++|.+
T Consensus 265 ~~~~~~~~~~~vgD~~-~di~~a~~aG~~~~~v~~ 298 (301)
T 1ltq_A 265 HIAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVAS 298 (301)
T ss_dssp HTTTTCEEEEEEECCH-HHHHHHHHTTCCEEECSC
T ss_pred HhccccceEEEeCCcH-HHHHHHHHcCCeEEEecC
Confidence 9887655 79999999 999999999999999973
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=9.8e-17 Score=134.36 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=51.9
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+..|+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++.++.++ .|++|+.+.++ +...
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~ag~~vam-----~na~~~~k~---~A~~v~~~~~e~Gv~~~ 264 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQG-NDLTMIKYAGLGVAM-----GNAIDEVKE---AAQAVTLTNAENGVAAA 264 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CC-TTHHHHHHSTEECBC--------CCHHHH---HCSCBC------CHHHH
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCch-hhHHHHHhcCceeec-----cCCCHHHHH---hcceeccCCCccHHHHH
Confidence 445588999999999999999999999999 999999999987666 344555554 78999988776 7777
Q ss_pred HHhcc
Q 023578 272 LEANF 276 (280)
Q Consensus 272 l~~~~ 276 (280)
|++++
T Consensus 265 i~~~~ 269 (279)
T 3mpo_A 265 IRKYA 269 (279)
T ss_dssp HC---
T ss_pred HHHHh
Confidence 76654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=123.46 Aligned_cols=124 Identities=14% Similarity=0.131 Sum_probs=94.8
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcc-----cc--eee--CC-C---------------------
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF-----SP--ALS--RE-F--------------------- 192 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~f-----d~--v~~--~~-~--------------------- 192 (280)
+.|...+.|++|+++|++++++|+.....+...++.+|+.. .+ ++. ++ .
T Consensus 23 i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~ 102 (227)
T 1l6r_A 23 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSM 102 (227)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSC
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcC
Confidence 45667889999999999999999999988888888887641 00 110 11 0
Q ss_pred ----------------------------------------------CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhh
Q 023578 193 ----------------------------------------------RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDD 226 (280)
Q Consensus 193 ----------------------------------------------~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~D 226 (280)
..+.+|+..++.+++++|++++++++|||+. ||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~-nD 181 (227)
T 1l6r_A 103 RSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN-ND 181 (227)
T ss_dssp BCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG-GG
T ss_pred CccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH-Hh
Confidence 2335778899999999999999999999999 99
Q ss_pred HHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhcc
Q 023578 227 VACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEANF 276 (280)
Q Consensus 227 i~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~ 276 (280)
++|++.+|+.++ +. ++..+.++ .+++++.+..+ +.+.|++++
T Consensus 182 ~~m~~~ag~~va-~~----n~~~~~k~---~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 182 MPMFQLPVRKAC-PA----NATDNIKA---VSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp HHHHTSSSEEEE-CT----TSCHHHHH---HCSEECSCCTTHHHHHHHHHTT
T ss_pred HHHHHHcCceEE-ec----CchHHHHH---hCCEEecCCCCcHHHHHHHHHh
Confidence 999999998644 32 34444443 78999988754 777777764
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.6e-16 Score=131.12 Aligned_cols=75 Identities=16% Similarity=0.255 Sum_probs=63.4
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+.+|+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++.++.++ .|++|+.+..| +...
T Consensus 225 ~~~~K~~al~~l~~~lgi~~~e~i~~GDs~-NDi~m~~~ag~~vam-----~na~~~~k~---~Ad~v~~~~~edGv~~~ 295 (304)
T 3l7y_A 225 KGLHKGWALQQLLKRWNFTSDHLMAFGDGG-NDIEMLKLAKYSYAM-----ANAPKNVKA---AANYQAKSNDESGVLDV 295 (304)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHCTEEEEC-----TTSCHHHHH---HCSEECCCGGGTHHHHH
T ss_pred CCCCHHHHHHHHHHHhCcCHHHEEEECCCH-HHHHHHHhcCCeEEc-----CCcCHHHHH---hccEEcCCCCcchHHHH
Confidence 566788999999999999999999999999 999999999987665 345555554 89999999888 8888
Q ss_pred HHhccC
Q 023578 272 LEANFD 277 (280)
Q Consensus 272 l~~~~~ 277 (280)
|++++.
T Consensus 296 l~~~~~ 301 (304)
T 3l7y_A 296 IDNYLA 301 (304)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-17 Score=137.79 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=63.7
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLS 270 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~ 270 (280)
..++||+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++..+.+ ..+++++.+..+ +.+
T Consensus 183 ~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~-nD~~~~~~ag~~v~~-----~n~~~~~~---~~a~~v~~~~~~dGv~~ 253 (261)
T 2rbk_A 183 AKGDTKQKGIDEIIRHFGIKLEETMSFGDGG-NDISMLRHAAIGVAM-----GQAKEDVK---AAADYVTAPIDEDGISK 253 (261)
T ss_dssp STTCSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC-----TTSCHHHH---HHSSEECCCGGGTHHHH
T ss_pred CCCCChHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCceEEe-----cCccHHHH---hhCCEEeccCchhhHHH
Confidence 4678999999999999999999999999999 999999999996655 23333443 479999999999 999
Q ss_pred HHHhcc
Q 023578 271 ILEANF 276 (280)
Q Consensus 271 ~l~~~~ 276 (280)
.|+++.
T Consensus 254 ~l~~~~ 259 (261)
T 2rbk_A 254 AMKHFG 259 (261)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 998764
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.5e-15 Score=123.32 Aligned_cols=136 Identities=15% Similarity=0.169 Sum_probs=92.8
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMP 146 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 146 (280)
.+++|+||+||||+|+.+.+...+... .. + ... +.++... ....++|
T Consensus 58 ~~kavifDlDGTLld~~~~~~~~~~~~--~~---------------------~-~~~-------~~~~~~~--~~~~~~p 104 (258)
T 2i33_A 58 KKPAIVLDLDETVLDNSPHQAMSVKTG--KG---------------------Y-PYK-------WDDWINK--AEAEALP 104 (258)
T ss_dssp SEEEEEECSBTTTEECHHHHHHHHHHS--CC---------------------T-TTT-------HHHHHHH--CCCEECT
T ss_pred CCCEEEEeCcccCcCCHHHHHHHHhcc--cc---------------------h-HHH-------HHHHHHc--CCCCcCc
Confidence 479999999999998765443333321 10 0 000 1111111 3567899
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCc---hHHHHHHHHHcCCc----ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNI---KEAVDLFHNRFGIT----FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~---~~~~~~~l~~~g~~----fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
|+.++|+.|+++|++++++||+. ...+...++.+|+. |+.+++.+. ..||.+ ...++ ..|. +.|++|
T Consensus 105 g~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~-~~K~~~--~~~~~-~~~~--~~~l~V 178 (258)
T 2i33_A 105 GSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK-EKGKEK--RRELV-SQTH--DIVLFF 178 (258)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT-CCSSHH--HHHHH-HHHE--EEEEEE
T ss_pred cHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC-CCCcHH--HHHHH-HhCC--CceEEe
Confidence 99999999999999999999987 55667778888876 344555443 245543 33333 3333 348999
Q ss_pred cCCchhhHHHHH-------H---------cCCcEEEEcC
Q 023578 220 GDSLKDDVACGK-------R---------AGAFTCLLDE 242 (280)
Q Consensus 220 GDs~~~Di~~a~-------~---------~G~~~i~v~~ 242 (280)
||+. +|+.+|. + +|+.++.+.+
T Consensus 179 GDs~-~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn 216 (258)
T 2i33_A 179 GDNL-SDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPN 216 (258)
T ss_dssp ESSG-GGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred CCCH-HHhcccccCCHHHHHHHHHHHHHHhcCceEECCC
Confidence 9999 9999983 4 8999999885
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-16 Score=128.85 Aligned_cols=75 Identities=12% Similarity=0.159 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+-.|..+++.+++++|+++++|++|||+. ||++|++.+|+.+++ +++.++.++ .+++|+.+..+ +...
T Consensus 180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~-NDi~ml~~ag~~vam-----~na~~~~k~---~A~~v~~~~~~dGva~~ 250 (258)
T 2pq0_A 180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGL-NDIEMLSFVGTGVAM-----GNAHEEVKR---VADFVTKPVDKEGIWYG 250 (258)
T ss_dssp SSCCHHHHHHHHHHHHTCCGGGEEEECCSG-GGHHHHHHSSEEEEE-----TTCCHHHHH---TCSEEECCGGGTHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcH-HhHHHHHhCCcEEEe-----CCCcHHHHH---hCCEEeCCCCcchHHHH
Confidence 344567889999999999999999999999 999999999998776 245555554 79999999876 8888
Q ss_pred HHhccC
Q 023578 272 LEANFD 277 (280)
Q Consensus 272 l~~~~~ 277 (280)
|+++..
T Consensus 251 i~~~~l 256 (258)
T 2pq0_A 251 LKQLQL 256 (258)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 887653
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-15 Score=126.43 Aligned_cols=111 Identities=16% Similarity=0.284 Sum_probs=79.9
Q ss_pred hhhCCCeEEEEeCCchHHHHHHHHHcC----CcccceeeC----C-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchh
Q 023578 155 LDSKKIRRGLITRNIKEAVDLFHNRFG----ITFSPALSR----E-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKD 225 (280)
Q Consensus 155 L~~~g~~i~ivS~~~~~~~~~~l~~~g----~~fd~v~~~----~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~ 225 (280)
+++.++++.++++... .+.+++.++ -.|+.+.++ + ...+++|+.+++.+++++|++++++++|||+. |
T Consensus 142 ~~~~~~ki~i~~~~~~--~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~-n 218 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDEQ--IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSG-N 218 (271)
T ss_dssp CCSCEEEEEEECCGGG--HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSG-G
T ss_pred CCCceEEEEEEcCHHH--HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcH-H
Confidence 3456778888876532 344443333 225555554 3 34678999999999999999999999999999 9
Q ss_pred hHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhcc
Q 023578 226 DVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEANF 276 (280)
Q Consensus 226 Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~ 276 (280)
|++|++.+|+.+++ . ++..+.+. .+++++.+..+ +...|++++
T Consensus 219 D~~m~~~ag~~va~-~----na~~~~k~---~a~~v~~~~~~dGVa~~l~~~~ 263 (271)
T 1rlm_A 219 DAEMLKMARYSFAM-G----NAAENIKQ---IARYATDDNNHEGALNVIQAVL 263 (271)
T ss_dssp GHHHHHHCSEEEEC-T----TCCHHHHH---HCSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEe-C----CccHHHHH---hCCeeCcCCCCChHHHHHHHHH
Confidence 99999999996553 2 34444443 79999999876 666666553
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.7e-14 Score=120.11 Aligned_cols=79 Identities=18% Similarity=0.195 Sum_probs=60.9
Q ss_pred CCCCChHHHHHHHHhc----------------------CC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 023578 194 PYKPDPGPLLHICSTW----------------------EV-----QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY 246 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~l----------------------gi-----~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~ 246 (280)
.+||.+.+|+.+++.+ |+ ++++++||||+..+|+.+|+++||.+++|.++..
T Consensus 244 ~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~- 322 (352)
T 3kc2_A 244 LGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY- 322 (352)
T ss_dssp CSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC-
T ss_pred ecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC-
Confidence 5789999999876654 22 6799999999994599999999999999986322
Q ss_pred CccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 247 SADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 247 ~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
...+ ......|+++++++.|+.++|.+
T Consensus 323 ~~~~-~~~~~~pd~vi~~l~el~~~il~ 349 (352)
T 3kc2_A 323 NEGD-DLKECKPTLIVNDVFDAVTKTLE 349 (352)
T ss_dssp CTTC-CCTTCCCSEECSSHHHHHHHHHH
T ss_pred Cccc-ccccCCCCEEECCHHHHHHHHHH
Confidence 2222 21246899999999999988754
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=6.5e-14 Score=116.40 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+.+|+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++.++.++ .|++++.+.++ +...
T Consensus 191 ~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~-NDi~m~~~ag~~vam-----~na~~~~k~---~Ad~v~~~~~edGv~~~ 261 (268)
T 3r4c_A 191 AGTSKATGLSLFADYYRVKVSEIMACGDGG-NDIPMLKAAGIGVAM-----GNASEKVQS---VADFVTDTVDNSGLYKA 261 (268)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHSSEEEEC-----TTSCHHHHH---TCSEECCCTTTTHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEECCcH-HhHHHHHhCCCeEEe-----CCCcHHHHH---hcCEeeCCCCcCHHHHH
Confidence 566788999999999999999999999999 999999999987766 355555554 79999999877 8888
Q ss_pred HHhcc
Q 023578 272 LEANF 276 (280)
Q Consensus 272 l~~~~ 276 (280)
|+++.
T Consensus 262 l~~~~ 266 (268)
T 3r4c_A 262 LKHFG 266 (268)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 87763
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-15 Score=127.02 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=75.3
Q ss_pred hCCCeEEEEeCCchHHHHHHHH----HcCCcccceeeCC-----CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhH
Q 023578 157 SKKIRRGLITRNIKEAVDLFHN----RFGITFSPALSRE-----FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDV 227 (280)
Q Consensus 157 ~~g~~i~ivS~~~~~~~~~~l~----~~g~~fd~v~~~~-----~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di 227 (280)
..++..+++++......+.+.+ .++-.+..++++. ...+.+|+.+++.+++++|++++++++|||+. ||+
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~-NDi 238 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGM-NDA 238 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSG-GGH
T ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcH-hhH
Confidence 3445455666544444443333 3332233333332 22567788999999999999999999999999 999
Q ss_pred HHHHHcCCcEEEEcCCCCCCccccccCCCCCC--EEEcCHHH--HHHHHHhcc
Q 023578 228 ACGKRAGAFTCLLDETGRYSADDFTKSNLQPD--FRVSSLTE--VLSILEANF 276 (280)
Q Consensus 228 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d--~v~~~~~d--l~~~l~~~~ 276 (280)
+|++.+|+.+++ +++.++.++ .++ +++.+.++ +...|++++
T Consensus 239 ~ml~~ag~~vAm-----~Na~~~vk~---~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 239 EMLSMAGKGCIM-----ANAHQRLKD---LHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHHSSEEEEC-----TTSCHHHHH---HCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHhcCCEEEc-----cCCCHHHHH---hCCCCEecccCCcchHHHHHHHHh
Confidence 999999987766 455555554 455 57888766 777777654
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-14 Score=115.37 Aligned_cols=94 Identities=14% Similarity=0.063 Sum_probs=82.6
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...+.||+.++|+++++. ++++|+|++...+++.+++.++.. |+.+++++ +...| ..|.+.++++|.++++|+
T Consensus 66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~v 141 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVI 141 (195)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEE
T ss_pred EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEE
Confidence 356799999999999998 999999999999999999999987 88888765 44434 467888999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEE
Q 023578 218 MVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
+|||+. .++.++.++|+.++.
T Consensus 142 ivDDs~-~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 142 IVDNSP-ASYIFHPENAVPVQS 162 (195)
T ss_dssp EEESCG-GGGTTCGGGEEECCC
T ss_pred EEECCH-HHhhhCccCccEEee
Confidence 999999 999999999987654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-14 Score=123.67 Aligned_cols=122 Identities=12% Similarity=0.125 Sum_probs=81.5
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCC---------------------CCCCC--
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFR---------------------PYKPD-- 198 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~---------------------~~Kp~-- 198 (280)
..+.+++.++++.|++ |++++++|+....++....+.+++. +.+.+.... ..++.
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR-GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh-hhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 3678999999999999 9999999998777777777777662 222221100 00111
Q ss_pred -------------hHHHH----------HHHHhcCCCCCc----EEEEcCCchhhHHHHHHc----CCcEEEEcCCCCCC
Q 023578 199 -------------PGPLL----------HICSTWEVQPNE----VMMVGDSLKDDVACGKRA----GAFTCLLDETGRYS 247 (280)
Q Consensus 199 -------------~~~~~----------~~~~~lgi~~~~----~v~iGDs~~~Di~~a~~~----G~~~i~v~~~~~~~ 247 (280)
|..+. +.....|+++++ |++|||+. ||++|++.+ |+.+++ + +
T Consensus 180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~-NDi~ml~~A~~~~g~~vam-n-----a 252 (332)
T 1y8a_A 180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSI-SDYKMFEAARGLGGVAIAF-N-----G 252 (332)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSG-GGHHHHHHHHHTTCEEEEE-S-----C
T ss_pred HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcH-hHHHHHHHHhhcCCeEEEe-c-----C
Confidence 11122 111112677888 99999999 999999999 998776 4 2
Q ss_pred ccccccCCCCCCEEEcC--HHHHHHHHHhc
Q 023578 248 ADDFTKSNLQPDFRVSS--LTEVLSILEAN 275 (280)
Q Consensus 248 ~~~~~~~~~~~d~v~~~--~~dl~~~l~~~ 275 (280)
.++.+ ..|++++.+ .+.+...|+++
T Consensus 253 ~~~lk---~~Ad~v~~~~~~dGV~~~l~~~ 279 (332)
T 1y8a_A 253 NEYAL---KHADVVIISPTAMSEAKVIELF 279 (332)
T ss_dssp CHHHH---TTCSEEEECSSTHHHHHHHHHH
T ss_pred CHHHH---hhCcEEecCCCCCHHHHHHHHH
Confidence 23343 479999987 55577766654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.39 E-value=9.6e-14 Score=116.81 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=57.8
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHH
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSIL 272 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l 272 (280)
+-.|..+++.+++++|++++++++|||+. ||++|++.+|+. +.+. ++..+.+. .+++++.+..+ +...|
T Consensus 214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~~-va~~----~~~~~~~~---~a~~v~~~~~~dGVa~~i 284 (288)
T 1nrw_A 214 KASKGQALKRLAKQLNIPLEETAAVGDSL-NDKSMLEAAGKG-VAMG----NAREDIKS---IADAVTLTNDEHGVAHMM 284 (288)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEESSG-GGHHHHHHSSEE-EECT----TCCHHHHH---HCSEECCCGGGTHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHcCcE-EEEc----CCCHHHHh---hCceeecCCCcChHHHHH
Confidence 34567889999999999999999999999 999999999994 4443 34444443 69999998876 77777
Q ss_pred Hhc
Q 023578 273 EAN 275 (280)
Q Consensus 273 ~~~ 275 (280)
+++
T Consensus 285 ~~~ 287 (288)
T 1nrw_A 285 KHL 287 (288)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.38 E-value=5.2e-14 Score=118.10 Aligned_cols=76 Identities=20% Similarity=0.219 Sum_probs=60.9
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+-+|+.+++.+++++|++++++++|||+. ||++|++.+|+.++ +. ++..+.++ .+++++.+..+ +.+.
T Consensus 195 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~~va-~~----n~~~~~~~---~a~~v~~~~~~dGV~~~ 265 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLGIKPEEIMAIGDQE-NDIAMIEYAGVGVA-VD----NAIPSVKE---VANFVTKSNLEDGVAFA 265 (282)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEE-CT----TSCHHHHH---HCSEECCCTTTTHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCHHHEEEECCcH-HHHHHHHHCCcEEE-ec----CCcHHHHh---hCCEEecCCCcchHHHH
Confidence 455778999999999999999999999999 99999999998543 32 34444443 68999998766 8888
Q ss_pred HHhccCC
Q 023578 272 LEANFDL 278 (280)
Q Consensus 272 l~~~~~~ 278 (280)
|++++.+
T Consensus 266 l~~~~~~ 272 (282)
T 1rkq_A 266 IEKYVLN 272 (282)
T ss_dssp HHHHTTC
T ss_pred HHHHHhc
Confidence 8877643
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.37 E-value=9.3e-14 Score=108.69 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=80.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...+.||+.++|+++++. ++++|+|++...+++.+++.++.. |+.+++.+ +...| ..+.+.++++|.++++|+
T Consensus 53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~v 128 (181)
T 2ght_A 53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVL 128 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEE
T ss_pred EEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEE
Confidence 356899999999999998 999999999999999999999987 78777765 33322 357788899999999999
Q ss_pred EEcCCchhhHHHHHHcCCcE
Q 023578 218 MVGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~ 237 (280)
+|||+. .++.++.++|+.+
T Consensus 129 ivdDs~-~~~~~~~~ngi~i 147 (181)
T 2ght_A 129 ILDNSP-ASYVFHPDNAVPV 147 (181)
T ss_dssp EECSCG-GGGTTCTTSBCCC
T ss_pred EEeCCH-HHhccCcCCEeEe
Confidence 999999 9999999999985
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.37 E-value=3.8e-13 Score=110.17 Aligned_cols=84 Identities=17% Similarity=0.247 Sum_probs=65.2
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCch----HHHHHHHHHcCCc-cc--ceeeCCCCCCCCChHHHHHHHHhcCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIK----EAVDLFHNRFGIT-FS--PALSREFRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~----~~~~~~l~~~g~~-fd--~v~~~~~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
....++||+.++++.|+++|++++++||... ..+...++.+|+. ++ .++..... ..|......+.+. |..
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~--~~K~~~r~~l~~~-Gy~ 174 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK--SAKAARFAEIEKQ-GYE 174 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC--SCCHHHHHHHHHT-TEE
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC--CChHHHHHHHHhc-CCC
Confidence 3568999999999999999999999999754 5888899999998 34 56554332 3445666666655 432
Q ss_pred CCcEEEEcCCchhhHHH
Q 023578 213 PNEVMMVGDSLKDDVAC 229 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~ 229 (280)
.+++|||+. +|+.+
T Consensus 175 --iv~~vGD~~-~Dl~~ 188 (262)
T 3ocu_A 175 --IVLYVGDNL-DDFGN 188 (262)
T ss_dssp --EEEEEESSG-GGGCS
T ss_pred --EEEEECCCh-HHhcc
Confidence 499999999 99997
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-13 Score=116.18 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc-CHHH--HHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS-SLTE--VLS 270 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~-~~~d--l~~ 270 (280)
.+-+|+.+++.+++++|++++++++|||+. ||++|++.+|+.++ +. ++..+.++ .+++++. +..+ +..
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~~va-~~----na~~~~k~---~a~~v~~~~~~~dGVa~ 291 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAE-NDIAMLSNFKYSFA-VA----NATDSAKS---HAKCVLPVSHREGAVAY 291 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHSCSEEEE-CT----TCCHHHHH---HSSEECSSCTTTTHHHH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCCeEE-Ec----CCcHHHHh---hCCEEEccCCCCcHHHH
Confidence 456788999999999999999999999999 99999999999644 33 44444443 7899998 7655 888
Q ss_pred HHHhccCCC
Q 023578 271 ILEANFDLI 279 (280)
Q Consensus 271 ~l~~~~~~~ 279 (280)
.|++++..+
T Consensus 292 ~l~~~~~~~ 300 (301)
T 2b30_A 292 LLKKVFDLK 300 (301)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 888877654
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.5e-12 Score=102.38 Aligned_cols=96 Identities=16% Similarity=0.240 Sum_probs=70.0
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch----HHHHHHHHHcCCc-cc--ceeeCCCCCCCCChHHHHHHHHhcCCCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK----EAVDLFHNRFGIT-FS--PALSREFRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~----~~~~~~l~~~g~~-fd--~v~~~~~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
...++||+.++++.|+++|++++++||... ..+...++.+|+. ++ .++..... ..|......+.+ .|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~--~~K~~~r~~L~~-~gy-- 173 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK--SNKSVRFKQVED-MGY-- 173 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC--SSSHHHHHHHHT-TTC--
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC--CChHHHHHHHHh-cCC--
Confidence 568999999999999999999999999754 5888899999998 33 45543222 233444444444 343
Q ss_pred CcEEEEcCCchhhHHH--------HHH---------cCCcEEEEcC
Q 023578 214 NEVMMVGDSLKDDVAC--------GKR---------AGAFTCLLDE 242 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~--------a~~---------~G~~~i~v~~ 242 (280)
.-+++|||+. +|+.+ +++ .|-..|.+.+
T Consensus 174 ~iv~~iGD~~-~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPN 218 (260)
T 3pct_A 174 DIVLFVGDNL-NDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPN 218 (260)
T ss_dssp EEEEEEESSG-GGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred CEEEEECCCh-HHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCC
Confidence 3499999999 99998 333 4667777764
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.29 E-value=3.4e-13 Score=112.26 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=60.5
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+.+|+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++..+.++ .+++++.+..+ +.+.
T Consensus 187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~-nD~~~~~~ag~~v~~-----~n~~~~~~~---~a~~v~~~~~~dGv~~~ 257 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNE-NDLFMFEEAGLRVAM-----ENAIEKVKE---ASDIVTLTNNDSGVSYV 257 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSH-HHHHHHTTCSEEEEC-----TTSCHHHHH---HCSEECCCTTTTHHHHH
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCch-hhHHHHHHcCCEEEe-----cCCCHHHHh---hCCEEEccCCcchHHHH
Confidence 456788999999999999999999999999 999999999996554 234444443 58999988655 8888
Q ss_pred HHhccC
Q 023578 272 LEANFD 277 (280)
Q Consensus 272 l~~~~~ 277 (280)
|+++++
T Consensus 258 i~~~~~ 263 (268)
T 1nf2_A 258 LERIST 263 (268)
T ss_dssp HTTBCB
T ss_pred HHHHHH
Confidence 887654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-11 Score=102.55 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCcccceeeC---C-CCCCCCChHHHHHHHHhcCCCC--CcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 023578 171 EAVDLFHNRFGITFSPALSR---E-FRPYKPDPGPLLHICSTWEVQP--NEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244 (280)
Q Consensus 171 ~~~~~~l~~~g~~fd~v~~~---~-~~~~Kp~~~~~~~~~~~lgi~~--~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~ 244 (280)
..+...++..++ +.+.++ + ... ++|+.+++.+++++|+++ +++++|||+. ||+.|++.+|+.+++-
T Consensus 149 ~~~~~~l~~~~~--~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~-nD~~m~~~ag~~va~~---- 220 (259)
T 3zx4_A 149 EAVLEALEAVGL--EWTHGGRFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSL-NDLPLFRAVDLAVYVG---- 220 (259)
T ss_dssp HHHHHHHHHTTC--EEEECSSSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSG-GGHHHHHTSSEEEECS----
T ss_pred HHHHHHHHHCCc--EEEecCceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCH-HHHHHHHhCCCeEEeC----
Confidence 344444555453 333332 3 234 788999999999999998 9999999999 9999999999876653
Q ss_pred CCCccccccCCCCCCEEEcCHHH--HHHHHHhccC
Q 023578 245 RYSADDFTKSNLQPDFRVSSLTE--VLSILEANFD 277 (280)
Q Consensus 245 ~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~~ 277 (280)
++.. . .+++++.+..+ +.+.|+.++.
T Consensus 221 -na~~-~-----~~~~~~~~~~~~gv~~~~~~~~~ 248 (259)
T 3zx4_A 221 -RGDP-P-----EGVLATPAPGPEGFRYAVERYLL 248 (259)
T ss_dssp -SSCC-C-----TTCEECSSCHHHHHHHHHHHHTT
T ss_pred -Chhh-c-----CCcEEeCCCCchHHHHHHHHHHH
Confidence 2322 1 56788877544 6666766654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-10 Score=94.76 Aligned_cols=77 Identities=10% Similarity=0.031 Sum_probs=40.5
Q ss_pred CCCChHHHHHHHHhcC-CCCCc--EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCC--CCC-EEEcCHHH-
Q 023578 195 YKPDPGPLLHICSTWE-VQPNE--VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNL--QPD-FRVSSLTE- 267 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lg-i~~~~--~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~--~~d-~v~~~~~d- 267 (280)
+-+|+.+++.+++++| +++++ +++|||+. ||+.|++.+|+. +.+. ++....++.+. .++ +++.+..+
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~~-va~~----n~~~~~~~~~~~~~a~~~v~~~~~~d 260 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGP-NDAPLLEVMDYA-VIVK----GLNREGVHLHDEDPARVWRTQREGPE 260 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSG-GGHHHHHTSSEE-EECC----CCC-----------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCCh-hhHHHHHhCCce-EEec----CCCccchhhccccCCceeEccCCCch
Confidence 4467889999999999 99999 99999999 999999999986 4443 33322222222 378 88877654
Q ss_pred -HHHHHHhccC
Q 023578 268 -VLSILEANFD 277 (280)
Q Consensus 268 -l~~~l~~~~~ 277 (280)
+...|++++.
T Consensus 261 GVa~~l~~~l~ 271 (275)
T 1xvi_A 261 GWREGLDHFFS 271 (275)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 6666666543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=95.30 Aligned_cols=64 Identities=9% Similarity=-0.057 Sum_probs=50.6
Q ss_pred CCCChHHHHHHHHhcCC-CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc-cccccCCCCCCEEEcCHHH
Q 023578 195 YKPDPGPLLHICSTWEV-QPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSA-DDFTKSNLQPDFRVSSLTE 267 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi-~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~d~v~~~~~d 267 (280)
+-.|..+++.+++++|+ +++++++|||+. ||++|++.+|+.+++ . ++. .+.++ .+++++.+..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~-NDi~Ml~~ag~~va~-g----na~~~~~~~---~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSY-NDFPMFEVVDKVFIV-G----SLKHKKAQN---VSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSG-GGHHHHTTSSEEEEE-S----SCCCTTEEE---ESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCc-ccHHHHHhCCcEEEe-C----CCCccccch---hceEEeccccc
Confidence 56778999999999998 999999999999 999999999997555 2 333 33443 57777766654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.2e-10 Score=97.99 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=65.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc----ccceeeCC-----CC-------------CCCCChH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT----FSPALSRE-----FR-------------PYKPDPG 200 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~----fd~v~~~~-----~~-------------~~Kp~~~ 200 (280)
+++||+.++++.|+++|++++|||++....++.+.+.+|+. .+.|++.+ .+ .+..|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~ 300 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ 300 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence 47999999999999999999999999999999999998753 24444321 11 1111333
Q ss_pred HHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcC
Q 023578 201 PLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG 234 (280)
Q Consensus 201 ~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G 234 (280)
.++..++. ......++++|||. +|+.|.++.+
T Consensus 301 ~i~~~~~~-~~~~~~i~a~GDs~-~D~~ML~~~~ 332 (385)
T 4gxt_A 301 TINKLIKN-DRNYGPIMVGGDSD-GDFAMLKEFD 332 (385)
T ss_dssp HHHHHTCC-TTEECCSEEEECSG-GGHHHHHHCT
T ss_pred HHHHHHHh-cCCCCcEEEEECCH-hHHHHHhcCc
Confidence 44443322 23445689999999 9999999854
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.96 E-value=3.4e-09 Score=89.31 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=65.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCccc--ceeeCC-----C------------CCCCCChHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS--PALSRE-----F------------RPYKPDPGP 201 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd--~v~~~~-----~------------~~~Kp~~~~ 201 (280)
..++.||+.++++.|+++|++++++|++....++.+.+.+|+.++ .+++.. . ...|+.+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 468899999999999999999999999999999999999998732 233211 0 112222211
Q ss_pred HHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc
Q 023578 202 LLHICSTWEVQPNEVMMVGDSLKDDVACGKRA 233 (280)
Q Consensus 202 ~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~ 233 (280)
-.....++.-...+++++||+. ||+.|++.+
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGi-NDa~m~k~l 249 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQ-GDLRMADGV 249 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSG-GGGGTTTTC
T ss_pred HHHHHHHhhccCCEEEEEeCcH-HHHHHHhCc
Confidence 1122223333567899999999 999997744
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=7.6e-09 Score=92.17 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=81.2
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc-CC-----------c----ccceeeCCCCCCCCChHH--
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF-GI-----------T----FSPALSREFRPYKPDPGP-- 201 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~-g~-----------~----fd~v~~~~~~~~Kp~~~~-- 201 (280)
..+...|++..+|+.||+.| ++.++||+...++..+.+.+ |. + ||.|+... .||....
T Consensus 243 kYv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A---~KP~FF~~~ 318 (555)
T 2jc9_A 243 KYVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA---RKPLFFGEG 318 (555)
T ss_dssp HHBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC---CTTGGGTTC
T ss_pred HhcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC---CCCCcccCC
Confidence 34556789999999999999 99999999999999998877 73 1 78766532 2332111
Q ss_pred --------------------------------HHHHHHhcCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcC
Q 023578 202 --------------------------------LLHICSTWEVQPNEVMMVGDSLKDDVACGK-RAGAFTCLLDE 242 (280)
Q Consensus 202 --------------------------------~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~-~~G~~~i~v~~ 242 (280)
+..+++.+|+.+++++||||+...||..++ .+||.|++|-.
T Consensus 319 ~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 319 TVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp CCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred CcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 588999999999999999999999999997 89999999973
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-08 Score=83.26 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=46.7
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc--CCcEEEEcCCCCCCccccccCCCCCCEEEcC---HHHHHHH
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA--GAFTCLLDETGRYSADDFTKSNLQPDFRVSS---LTEVLSI 271 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~---~~dl~~~ 271 (280)
.|..+++.+++++| +++|||+. ||++|.+.+ |..+++- ++ +..+++++.+ -+.+.+.
T Consensus 160 ~Kg~al~~l~~~~g-----via~GD~~-ND~~Ml~~a~~g~~vam~-----Na-------~~~A~~v~~~~~~~~gV~~~ 221 (239)
T 1u02_A 160 NKGSAIRSVRGERP-----AIIAGDDA-TDEAAFEANDDALTIKVG-----EG-------ETHAKFHVADYIEMRKILKF 221 (239)
T ss_dssp CHHHHHHHHHTTSC-----EEEEESSH-HHHHHHHTTTTSEEEEES-----SS-------CCCCSEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-----eEEEeCCC-ccHHHHHHhhCCcEEEEC-----CC-------CCcceEEeCCCCCHHHHHHH
Confidence 35566777777777 99999999 999999999 9877663 22 1478999998 5557676
Q ss_pred HHhcc
Q 023578 272 LEANF 276 (280)
Q Consensus 272 l~~~~ 276 (280)
|++++
T Consensus 222 l~~~~ 226 (239)
T 1u02_A 222 IEMLG 226 (239)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.80 E-value=3.5e-08 Score=91.63 Aligned_cols=113 Identities=13% Similarity=0.193 Sum_probs=86.2
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.|++.+.++.|+++|++++++|+.....++.+.+.+|++ .+++.-. ++.|...++.+ .-. +++++|||+
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~--P~~K~~~v~~l----~~~-~~v~~vGDg 527 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVL--PHQKSEEVKKL----QAK-EVVAFVGDG 527 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCC--TTCHHHHHHHH----TTT-CCEEEEECS
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEeCC--HHhHHHHHHHH----hhC-CeEEEEeCC
Confidence 57899999999999999999999999999999999999975 3332212 23344444444 333 789999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||+.|.+.+|+..++- .+.+... ..+|+++ +++.++.+.++
T Consensus 528 ~-ND~~al~~A~vgiamg-----~g~~~a~---~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 528 I-NDAPALAQADLGIAVG-----SGSDVAV---ESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp S-SCHHHHHHSSEEEEEC-----CCSCCSS---CCSSSEESSCCTTHHHHHHH
T ss_pred H-hHHHHHHhCCEEEEeC-----CCcHHHH---HhCCEEEecCCHHHHHHHHH
Confidence 9 9999999999766552 3333333 5899999 78888887765
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.71 E-value=5.8e-08 Score=72.05 Aligned_cols=44 Identities=18% Similarity=0.141 Sum_probs=34.5
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCch---HHHHHHHHHcCCcccce
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIK---EAVDLFHNRFGITFSPA 187 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~---~~~~~~l~~~g~~fd~v 187 (280)
+.|++.++|+.|+++|+.++++|+... ..+...++.+|+.++.+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEE
Confidence 567999999999999999999999873 34455667778765433
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=5.5e-08 Score=82.69 Aligned_cols=47 Identities=15% Similarity=0.216 Sum_probs=40.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH----cCCcccceee
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR----FGITFSPALS 189 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~----~g~~fd~v~~ 189 (280)
.++|++.++++.|+++|++++|||++....++.+.+. +|++-+.|++
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG 193 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIG 193 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEe
Confidence 5799999999999999999999999999999999877 5665455665
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-07 Score=88.59 Aligned_cols=113 Identities=13% Similarity=0.203 Sum_probs=85.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.|++.+.++.|+++|++++++|+.....++.+.+.+|++ .+++.-. +..|...++.+ .-. +++++|||+
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~--P~~K~~~v~~l----~~~-~~v~~vGDg 605 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVL--PHQKSEEVKKL----QAK-EVVAFVGDG 605 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCC--TTCHHHHHHHH----TTT-CCEEEEECS
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc--EEEccCC--HHHHHHHHHHH----hcC-CeEEEEECC
Confidence 57899999999999999999999999999999999999975 3333222 22334444444 333 789999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||+.|.+.+|+..++ +.+.+... ..+|+++ +++..+...++
T Consensus 606 ~-ND~~al~~A~vgiam-----g~g~~~a~---~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 606 I-NDAPALAQADLGIAV-----GSGSDVAV---ESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp S-TTHHHHHHSSEEEEC-----CCCSCCSS---CCSSEECSSCCTTHHHHHHH
T ss_pred h-hhHHHHhhCCEEEEe-----CCCcHHHH---HhCCEEEeCCCHHHHHHHHH
Confidence 9 999999999976554 23333333 5999999 78888887765
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.66 E-value=5.6e-09 Score=82.46 Aligned_cols=92 Identities=17% Similarity=0.180 Sum_probs=70.2
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
.....||+.++|+.+. +++.++|.|++...+++.+++.++.. |+..+..+....++ ..+.+.++.+|.++++|+
T Consensus 57 ~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~--g~y~KdL~~Lgrdl~~vI 133 (204)
T 3qle_A 57 RTAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKD--GVHIKDLSKLNRDLSKVI 133 (204)
T ss_dssp EEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEET--TEEECCGGGSCSCGGGEE
T ss_pred eEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEEC--CeeeecHHHhCCChHHEE
Confidence 3568999999999999 56999999999999999999999865 56555543211111 225667888999999999
Q ss_pred EEcCCchhhHHHHHHcCCc
Q 023578 218 MVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~ 236 (280)
+|+|++ .........|+.
T Consensus 134 iIDDsp-~~~~~~p~N~I~ 151 (204)
T 3qle_A 134 IIDTDP-NSYKLQPENAIP 151 (204)
T ss_dssp EEESCT-TTTTTCGGGEEE
T ss_pred EEECCH-HHHhhCccCceE
Confidence 999999 777654444443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-07 Score=86.74 Aligned_cols=114 Identities=17% Similarity=0.155 Sum_probs=87.0
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.|++.+.++.|+++|++++++|+.....++.+.+.+|++ .+++. -.|+-...+++++.-....+++|||+
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--~v~a~------~~P~~K~~~v~~l~~~g~~V~~vGDG 625 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--KVVAE------IMPEDKSRIVSELKDKGLIVAMAGDG 625 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--CEECS------CCHHHHHHHHHHHHHHSCCEEEEECS
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--EEEEe------cCHHHHHHHHHHHHhcCCEEEEEECC
Confidence 56799999999999999999999999999999999999975 33221 12344455555555456789999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
. ||+.|.+.+|+..++ +.+.+...+ .+|+++ +++..+...++
T Consensus 626 ~-ND~paL~~AdvGIAm-----g~g~d~a~~---~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 626 V-NDAPALAKADIGIAM-----GTGTDVAIE---SAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp S-TTHHHHHHSSEEEEE-----SSSCSHHHH---HCSEEECSCCSTTHHHHHH
T ss_pred h-HhHHHHHhCCEEEEe-----CCccHHHHH---hCCEEEccCCHHHHHHHHH
Confidence 9 999999999987666 234444443 889998 56767766554
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.47 E-value=3.8e-07 Score=88.85 Aligned_cols=122 Identities=16% Similarity=0.142 Sum_probs=86.3
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-c-----cceeeCC-CC----------------CCCCCh
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-F-----SPALSRE-FR----------------PYKPDP 199 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-f-----d~v~~~~-~~----------------~~Kp~~ 199 (280)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+. . +.+++++ .. ...-.|
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P 682 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 682 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCS
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCH
Confidence 56799999999999999999999999999999999999985 1 1222221 00 001112
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
+-...+++.+.-..+.++++||+. ||+.|.++|++..++ . .+.+..+ ..+|+++ +++..+...++
T Consensus 683 ~~K~~~v~~l~~~g~~v~~~GDG~-ND~~alk~Advgiam-g----~g~~~ak---~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 683 SHKSKIVEYLQSYDEITAMTGDGV-NDAPALKKAEIGIAM-G----SGTAVAK---TASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp SHHHHHHHHHHTTTCCEEEEECSG-GGHHHHHHSTEEEEE-T----TSCHHHH---HTCSEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHCCeEEEe-C----CCCHHHH---HhCCEEECCCCHHHHHHHHH
Confidence 233334444433357899999999 999999999997765 2 3333333 3899999 56888887764
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.34 E-value=2.6e-06 Score=62.06 Aligned_cols=29 Identities=3% Similarity=-0.258 Sum_probs=25.2
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKE 171 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~ 171 (280)
.+.|+..++++.++++|++++++||....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 46688999999999999999999997643
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.34 E-value=6e-07 Score=77.34 Aligned_cols=90 Identities=16% Similarity=0.075 Sum_probs=67.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---cc-ceeeCC-CCCCCCChHHHHHHHHhc-CCCCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FS-PALSRE-FRPYKPDPGPLLHICSTW-EVQPN 214 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd-~v~~~~-~~~~Kp~~~~~~~~~~~l-gi~~~ 214 (280)
.+...||+.++|+.+. .++.++|.|++...+++.+++.++.. |. .+++.+ .+. .+.+-++++ |.+++
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl~ 145 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDTS 145 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCCT
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCCc
Confidence 4678999999999999 66999999999999999999999876 55 466544 321 223345655 89999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|++|+|++ .-... . . ..|.|..
T Consensus 146 ~viiiDd~~-~~~~~-~--p-N~I~i~~ 168 (372)
T 3ef0_A 146 MVVVIDDRG-DVWDW-N--P-NLIKVVP 168 (372)
T ss_dssp TEEEEESCS-GGGTT-C--T-TEEECCC
T ss_pred eEEEEeCCH-HHcCC-C--C-cEeeeCC
Confidence 999999999 43322 2 3 5666653
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.8e-06 Score=82.91 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=85.5
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-cc-------------------------ceeeCC-----
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FS-------------------------PALSRE----- 191 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd-------------------------~v~~~~----- 191 (280)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+. .. .+++++
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 45799999999999999999999999999999999999885 10 111110
Q ss_pred --------------CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCC
Q 023578 192 --------------FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQ 257 (280)
Q Consensus 192 --------------~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 257 (280)
.......|+-...+.+.+.-....++++||+. ||+.|.+.|++..++- ..+.+..++ .
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~-ND~paLk~AdvGIAmg----~~gtd~ak~---a 750 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV-NDSPALKKADIGVAMG----ISGSDVSKQ---A 750 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSG-GGHHHHHHSSEEEEES----SSCCHHHHH---H
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCc-chHHHHHhCCceEEeC----CccCHHHHH---h
Confidence 01122334444444433322236799999999 9999999999987762 134444443 7
Q ss_pred CCEEEcC--HHHHHHHHH
Q 023578 258 PDFRVSS--LTEVLSILE 273 (280)
Q Consensus 258 ~d~v~~~--~~dl~~~l~ 273 (280)
+|+++.+ +..+...++
T Consensus 751 AD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 751 ADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp CSEEETTCCTHHHHHHHH
T ss_pred cCEEecCCCHHHHHHHHH
Confidence 8999865 777777664
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.17 E-value=4.1e-06 Score=80.34 Aligned_cols=122 Identities=14% Similarity=0.104 Sum_probs=83.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcc---cc---eeeCC---------------CCCCCCChHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF---SP---ALSRE---------------FRPYKPDPGP 201 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~f---d~---v~~~~---------------~~~~Kp~~~~ 201 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.- +. +++++ .....-.|+-
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 568999999999999999999999999999999999999851 10 11110 0111112222
Q ss_pred HHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHHH
Q 023578 202 LLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSILE 273 (280)
Q Consensus 202 ~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l~ 273 (280)
...+.+.+.-....+.|+||+. ||..|.++|++..++ . .+.+..++ .+|+++ +++..+...++
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGv-NDapaLk~AdvGIAm-g----~gtd~ak~---aADiVl~~~~~~~I~~ai~ 679 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGV-NDAPSLKKADTGIAV-E----GSSDAARS---AADIVFLAPGLGAIIDALK 679 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCG-GGHHHHHHSSEEEEE-T----TSCHHHHH---SSSEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCc-ccHHHHHhCCcCccc-c----cccHHHHH---hcCeEEcCCCHHHHHHHHH
Confidence 3333333322236799999999 999999999997776 2 23333333 789988 45766666554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.5e-06 Score=70.94 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=59.5
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccC----CCCCCEEEcCHHH--
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKS----NLQPDFRVSSLTE-- 267 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~----~~~~d~v~~~~~d-- 267 (280)
.+-+|+.+++.+++++|++++++++|||+. ||++|++.+|+.+++ +++.++.+.. ...+++++.+..+
T Consensus 159 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~-nD~~m~~~~g~~va~-----~na~~~~k~~a~~~~~~a~~v~~~~~~dG 232 (244)
T 1s2o_A 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSG-NDIGLFETSARGVIV-----RNAQPELLHWYDQWGDSRHYRAQSSHAGA 232 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHTSSSEEEEC-----TTCCHHHHHHHHHHCCTTEEECSSCHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCch-hhHHHHhccCcEEEE-----cCCcHHHHHHHhcccccceeecCCcchhH
Confidence 456788999999999999999999999999 999999999986444 2444444430 0037899988766
Q ss_pred HHHHHHhcc
Q 023578 268 VLSILEANF 276 (280)
Q Consensus 268 l~~~l~~~~ 276 (280)
+.+.|+++.
T Consensus 233 va~~i~~~~ 241 (244)
T 1s2o_A 233 ILEAIAHFD 241 (244)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 777777664
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=4.1e-06 Score=68.39 Aligned_cols=34 Identities=6% Similarity=-0.238 Sum_probs=26.4
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHH
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH 177 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l 177 (280)
+.+...++|++|+++|++++++|++....+...+
T Consensus 22 i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l 55 (246)
T 3f9r_A 22 QTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQL 55 (246)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence 3456777899999999999999998877554444
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.7e-05 Score=77.55 Aligned_cols=123 Identities=14% Similarity=0.084 Sum_probs=82.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCccc--------------------------ceeeCC-C---
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS--------------------------PALSRE-F--- 192 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd--------------------------~v~~~~-~--- 192 (280)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+.-+ .++.+. .
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 5689999999999999999999999999999999999988400 011110 0
Q ss_pred ---------------CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCC
Q 023578 193 ---------------RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQ 257 (280)
Q Consensus 193 ---------------~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 257 (280)
....-.|.-...+.+.+.-....++++||+. ||+.|.+.||+..++- .++.+..+ ..
T Consensus 684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~-ND~~mLk~A~vGIAMg----~ng~d~aK---~a 755 (1034)
T 3ixz_A 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGV-NDSPALKKADIGVAMG----IAGSDAAK---NA 755 (1034)
T ss_pred CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcH-HhHHHHHHCCeeEEeC----CccCHHHH---Hh
Confidence 0111123333333333333345699999999 9999999999987762 13444444 48
Q ss_pred CCEEEcC--HHHHHHHHH
Q 023578 258 PDFRVSS--LTEVLSILE 273 (280)
Q Consensus 258 ~d~v~~~--~~dl~~~l~ 273 (280)
+|+|+.+ +..+...++
T Consensus 756 AD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 756 ADMILLDDNFASIVTGVE 773 (1034)
T ss_pred cCEEeccCCchHHHHHHH
Confidence 9999875 344555443
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-06 Score=73.27 Aligned_cols=92 Identities=5% Similarity=-0.070 Sum_probs=64.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c--cc-eeeCC-C--C-CCCCChHHHHHHHHhc----
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F--SP-ALSRE-F--R-PYKPDPGPLLHICSTW---- 209 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f--d~-v~~~~-~--~-~~Kp~~~~~~~~~~~l---- 209 (280)
...||+.++|+.+.+. |.++|.|++...+++.+++.++.. + .. ++... . . ..+..+..+.+-++.+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~ 242 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY 242 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc
Confidence 4789999999999965 999999999999999999998765 2 21 12111 1 0 0111111234445555
Q ss_pred -CCCCCcEEEEcCCchhhHHHHHHcCCc
Q 023578 210 -EVQPNEVMMVGDSLKDDVACGKRAGAF 236 (280)
Q Consensus 210 -gi~~~~~v~iGDs~~~Di~~a~~~G~~ 236 (280)
|.++++++.|+|++ .-.......|+.
T Consensus 243 p~rdl~~tIiIDdsp-~~~~~~p~NgI~ 269 (320)
T 3shq_A 243 KQYNSSNTIMFDDIR-RNFLMNPKSGLK 269 (320)
T ss_dssp TTCCGGGEEEEESCG-GGGTTSGGGEEE
T ss_pred CCCChhHEEEEeCCh-HHhccCcCceEE
Confidence 88999999999999 777666555544
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.7e-06 Score=80.51 Aligned_cols=122 Identities=17% Similarity=0.087 Sum_probs=82.1
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcc----cceeeC-C-----------------CCCCCCChH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF----SPALSR-E-----------------FRPYKPDPG 200 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~f----d~v~~~-~-----------------~~~~Kp~~~ 200 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.- +.++.+ + .....-.|+
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~ 567 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE 567 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence 467999999999999999999999999999999999999841 111111 0 011122333
Q ss_pred HHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEc--CHHHHHHHHH
Q 023578 201 PLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVS--SLTEVLSILE 273 (280)
Q Consensus 201 ~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~--~~~dl~~~l~ 273 (280)
-...+.+.+.-....+.|+||+. ||..+.+++++..++- .+.+..++ .+|+++. ++..+.+.++
T Consensus 568 ~K~~iV~~lq~~g~~Vam~GDGv-NDapaLk~AdvGIAmg-----~gtd~ak~---aADivl~~~~~~~I~~ai~ 633 (885)
T 3b8c_A 568 HKYEIVKKLQERKHIVGMTGDGV-NDAPALKKADIGIAVA-----DATDAARG---ASDIVLTEPGLSVIISAVL 633 (885)
T ss_dssp HHHHHHHHHHHTTCCCCBCCCSS-TTHHHHHHSSSCCCCS-----SSHHHHGG---GCSSCCSSCSHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEcCCc-hhHHHHHhCCEeEEeC-----CccHHHHH---hcceeeccCchhHHHHHHH
Confidence 33333333322236789999999 9999999999987662 23333333 6788774 4666655543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.89 E-value=6e-05 Score=66.47 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=76.5
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-c------CCc----ccceeeCCCC-----------------
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-F------GIT----FSPALSREFR----------------- 193 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~------g~~----fd~v~~~~~~----------------- 193 (280)
+...|.+..+|++||++|.++.++||+...++...++. + |-+ ||.||+...+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 34468899999999999999999999999998877754 3 333 8988764211
Q ss_pred -----CC---CCC---hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHH-cCCcEEEEcC
Q 023578 194 -----PY---KPD---PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKR-AGAFTCLLDE 242 (280)
Q Consensus 194 -----~~---Kp~---~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~-~G~~~i~v~~ 242 (280)
.. +|. ..-...+.+.+|+...+|+||||+...||..++. .||.|++|-.
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 00 110 1134677788899999999999999899887775 6999999873
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.73 E-value=4.5e-05 Score=61.99 Aligned_cols=32 Identities=9% Similarity=0.005 Sum_probs=22.3
Q ss_pred cCCCCCcEEEEcC----CchhhHHHHHHcCCcEEEEc
Q 023578 209 WEVQPNEVMMVGD----SLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 209 lgi~~~~~v~iGD----s~~~Di~~a~~~G~~~i~v~ 241 (280)
+|++++++++||| +. ||++|.+.+|...+.+.
T Consensus 197 ~~i~~~~viafGD~~~~~~-ND~~Ml~~a~~ag~av~ 232 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGG-NDHEIFTDPRTMGYSVT 232 (246)
T ss_dssp TTSCCSEEEEEECSCC----CCCHHHHCTTEEEEECS
T ss_pred hCCCHHHEEEECCCCCCCC-CcHHHHHhCCcceEEee
Confidence 4677888888888 88 88888888776445543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=4e-05 Score=62.97 Aligned_cols=31 Identities=6% Similarity=-0.022 Sum_probs=27.2
Q ss_pred cCCCCCcEEEEcC----CchhhHHHHHHcCCcEEEE
Q 023578 209 WEVQPNEVMMVGD----SLKDDVACGKRAGAFTCLL 240 (280)
Q Consensus 209 lgi~~~~~v~iGD----s~~~Di~~a~~~G~~~i~v 240 (280)
+|++++++++||| +. ||++|.+.+|...+.+
T Consensus 206 ~gi~~~~viafGDs~~~~~-NDi~Ml~~~~~~g~av 240 (262)
T 2fue_A 206 DQDSFDTIHFFGNETSPGG-NDFEIFADPRTVGHSV 240 (262)
T ss_dssp TTSCCSEEEEEESCCSTTS-TTHHHHHSTTSEEEEC
T ss_pred HCCCHHHEEEECCCCCCCC-CCHHHHhcCccCcEEe
Confidence 6889999999999 89 9999999999755655
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=8.4e-05 Score=60.35 Aligned_cols=41 Identities=10% Similarity=0.016 Sum_probs=31.4
Q ss_pred HHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc-ccceeeC
Q 023578 149 AQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-FSPALSR 190 (280)
Q Consensus 149 ~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~-fd~v~~~ 190 (280)
.+++++++ +|++++++|++....+...++.+++. ++.+++.
T Consensus 25 ~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~ 66 (244)
T 1s2o_A 25 QEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTA 66 (244)
T ss_dssp HHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEET
T ss_pred HHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEEC
Confidence 45667766 57999999999998888898888875 4455553
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00022 Score=58.53 Aligned_cols=19 Identities=37% Similarity=0.385 Sum_probs=15.4
Q ss_pred CCccEEEEeCCCcccCCCC
Q 023578 66 TRLRGVVFDMDGTLTVPVI 84 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~ 84 (280)
.++|+|+||+||||+++..
T Consensus 11 ~~~kli~~DlDGTLl~~~~ 29 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQ 29 (262)
T ss_dssp --CEEEEEESBTTTBSTTS
T ss_pred cCeEEEEEeCccCCCCCCC
Confidence 4589999999999998765
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.016 Score=50.80 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=65.6
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc---ccc-eeeCC-CCCCCCChHHHHHHHHh-cCCCCC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT---FSP-ALSRE-FRPYKPDPGPLLHICST-WEVQPN 214 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~---fd~-v~~~~-~~~~Kp~~~~~~~~~~~-lgi~~~ 214 (280)
.+...||+.++|+.+.+ .|.++|.|.+...++..+++.++.. |.. +++.+ ++. .+.+-+.+ +|.+.+
T Consensus 81 ~V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~------~~~KdL~~ll~rdl~ 153 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDTS 153 (442)
T ss_dssp EEEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC------SSCCCGGGTCSSCCT
T ss_pred EEEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC------ceeeehHHhcCCCcc
Confidence 45779999999999994 5999999999999999999999876 555 55544 321 11122443 488999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 215 EVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 215 ~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
.+|.|+|++ . .-... . ..|.|..
T Consensus 154 ~vvIIDd~p-~-~~~~~--p-N~I~I~~ 176 (442)
T 3ef1_A 154 MVVVIDDRG-D-VWDWN--P-NLIKVVP 176 (442)
T ss_dssp TEEEEESCS-G-GGTTC--T-TEEECCC
T ss_pred eEEEEECCH-H-HhCCC--C-CEEEcCC
Confidence 999999999 4 32322 3 6666663
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.95 E-value=0.0056 Score=49.38 Aligned_cols=20 Identities=40% Similarity=0.526 Sum_probs=16.6
Q ss_pred CCccEEEEeCCCcccCCCCC
Q 023578 66 TRLRGVVFDMDGTLTVPVID 85 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~ 85 (280)
+++|+|+||+||||+++...
T Consensus 4 ~~~kli~~DlDGTLl~~~~~ 23 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQK 23 (246)
T ss_dssp CCSEEEEEESBTTTBCTTSC
T ss_pred CCceEEEEECCCCcCCCCcc
Confidence 35799999999999987653
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.47 Score=37.92 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=53.8
Q ss_pred CeEEEEeCCchHHHHHHHHHcCCc----ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCC
Q 023578 160 IRRGLITRNIKEAVDLFHNRFGIT----FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 160 ~~i~ivS~~~~~~~~~~l~~~g~~----fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~ 235 (280)
..-++||++.---.-..+=.+|+. .+-|+++.- . .|...|+.+.+++| +...-++|||+. ..-++|+..+|
T Consensus 177 ~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~k-i--GKesCFerI~~RFG-~k~~yvvIGDG~-eEe~AAk~~n~ 251 (274)
T 3geb_A 177 CVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATK-T--GKESCFERIMQRFG-RKAVYVVIGDGV-EEEQGAKKHNM 251 (274)
T ss_dssp EEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTT-T--CHHHHHHHHHHHHC-TTSEEEEEESSH-HHHHHHHHTTC
T ss_pred eeEEEEecCchHHHHHHHHHhhcccceecccccchhh-c--CHHHHHHHHHHHhC-CCceEEEECCCH-HHHHHHHHcCC
Confidence 345566665432222222344554 455777532 2 25689999999998 557788999999 99999999999
Q ss_pred cEEEEc
Q 023578 236 FTCLLD 241 (280)
Q Consensus 236 ~~i~v~ 241 (280)
+++-++
T Consensus 252 PFwrI~ 257 (274)
T 3geb_A 252 PFWRIS 257 (274)
T ss_dssp CEEECC
T ss_pred CeEEee
Confidence 999876
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.80 E-value=0.23 Score=40.11 Aligned_cols=83 Identities=19% Similarity=0.210 Sum_probs=54.6
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHH---HHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVD---LFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~---~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
+.|++.+.++.++++|++++++||+...... ..++.+|+. .+.++++. ......+++.. ...++.+
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~--------~~~~~~l~~~~-~~~~v~v 88 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG--------LATRLYMSKHL-DPGKIFV 88 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH--------HHHHHHHHHHS-CCCCEEE
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH--------HHHHHHHHHhC-CCCEEEE
Confidence 4589999999999999999999997653333 334456776 45566531 12223333332 2357888
Q ss_pred EcCCchhhHHHHHHcCCcE
Q 023578 219 VGDSLKDDVACGKRAGAFT 237 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~ 237 (280)
+|+. .....++..|+..
T Consensus 89 iG~~--~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 89 IGGE--GLVKEMQALGWGI 105 (263)
T ss_dssp ESCH--HHHHHHHHHTSCB
T ss_pred EcCH--HHHHHHHHcCCee
Confidence 8874 4677777788753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=92.83 E-value=0.027 Score=45.49 Aligned_cols=43 Identities=12% Similarity=-0.024 Sum_probs=33.5
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCC----chhhHHHHHHcCCcEEEEc
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDS----LKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs----~~~Di~~a~~~G~~~i~v~ 241 (280)
.+-.|..+++.+++ +++++++|||+ . ||++|.+.+|...+.|.
T Consensus 184 ~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~-NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 184 VGWDKTYCLQFVED----DFEEIHFFGDKTQEGG-NDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp TTCSGGGGGGGTTT----TCSEEEEEESCCSTTS-TTHHHHTCTTSEEEECS
T ss_pred CCCCHHHHHHHHHc----CcccEEEEeCCCCCCC-CCHHHHhCCCccEEEeC
Confidence 34455677777777 89999999996 8 99999998886555543
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=88.62 E-value=0.7 Score=37.58 Aligned_cols=97 Identities=9% Similarity=0.111 Sum_probs=62.7
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeC---CchHHHHHHHHHcCCc---ccceeeCC-CC-----CCCCC-------hHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITR---NIKEAVDLFHNRFGIT---FSPALSRE-FR-----PYKPD-------PGPLL 203 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~---~~~~~~~~~l~~~g~~---fd~v~~~~-~~-----~~Kp~-------~~~~~ 203 (280)
.+.|++.+.++.++++|++++++|| .....+...++.+|+. ++.++++. .. ..+|. ...+.
T Consensus 30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~~~~~~~l~~~~~~~v~~~lg~~~l~ 109 (284)
T 2hx1_A 30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGMITKEYIDLKVDGGIVAYLGTANSA 109 (284)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHHHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHHHHHHHHHHhhcCCcEEEEecCHHHH
Confidence 5679999999999999999999998 4556667778888875 34555531 00 01222 12446
Q ss_pred HHHHhcCCC-------------CCcEEEEcCCchh-----hHH----HHHHcCCcEEEEc
Q 023578 204 HICSTWEVQ-------------PNEVMMVGDSLKD-----DVA----CGKRAGAFTCLLD 241 (280)
Q Consensus 204 ~~~~~lgi~-------------~~~~v~iGDs~~~-----Di~----~a~~~G~~~i~v~ 241 (280)
..++.+|+. +.+++++|+.. + +.. ..++.|+. +.++
T Consensus 110 ~~l~~~G~~~~~~~~~~~~~~~~~~avv~~~~~-~~~~~~~~~~l~~~L~~~g~~-~i~t 167 (284)
T 2hx1_A 110 NYLVSDGIKMLPVSAIDDSNIGEVNALVLLDDE-GFNWFHDLNKTVNLLRKRTIP-AIVA 167 (284)
T ss_dssp HTTCBTTEEEEEGGGCCTTTGGGEEEEEECCSS-SSCHHHHHHHHHHHHHHCCCC-EEEE
T ss_pred HHHHHCCCeeccCCCCCcccCCCCCEEEEeCCC-CcCccccHHHHHHHHhcCCCe-EEEE
Confidence 677777762 34677777765 3 222 34567888 5555
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=85.94 E-value=1.3 Score=36.55 Aligned_cols=41 Identities=17% Similarity=0.291 Sum_probs=34.2
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeC---CchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITR---NIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~---~~~~~~~~~l~~~g~~ 183 (280)
.+.|++.+.++.|+++|++++++|| .........++.+|+.
T Consensus 37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4678999999999999999999997 4455666777888875
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=85.80 E-value=1.9 Score=33.27 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=54.0
Q ss_pred CHHHHHHHhhhCCCeEEEEeCC-chHHHHHHHHHcCCcccce-eeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCch
Q 023578 147 GTAQLCGFLDSKKIRRGLITRN-IKEAVDLFHNRFGITFSPA-LSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~-~~~~~~~~l~~~g~~fd~v-~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~ 224 (280)
++...|..+++.+-++++++-. .....+.+.+.+|+++... +..+. +.+....-+++-|++ ++|||..
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~-----e~~~~i~~l~~~G~~----vvVG~~~- 151 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSED-----EITTLISKVKTENIK----IVVSGKT- 151 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGG-----GHHHHHHHHHHTTCC----EEEECHH-
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHH-----HHHHHHHHHHHCCCe----EEECCHH-
Confidence 4556666777777799999853 2233566667788774332 11111 112333444455765 7999988
Q ss_pred hhHHHHHHcCCcEEEEc
Q 023578 225 DDVACGKRAGAFTCLLD 241 (280)
Q Consensus 225 ~Di~~a~~~G~~~i~v~ 241 (280)
-...|++.|+.++.+.
T Consensus 152 -~~~~A~~~Gl~~vli~ 167 (196)
T 2q5c_A 152 -VTDEAIKQGLYGETIN 167 (196)
T ss_dssp -HHHHHHHTTCEEEECC
T ss_pred -HHHHHHHcCCcEEEEe
Confidence 5889999999999986
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=85.74 E-value=1.3 Score=35.42 Aligned_cols=41 Identities=17% Similarity=0.198 Sum_probs=34.2
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeC---CchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITR---NIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~---~~~~~~~~~l~~~g~~ 183 (280)
.+.|+..+.+++++++|++++++|| .....+...++.+|+.
T Consensus 33 ~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 33 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 4678999999999999999999995 4556666777888876
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=85.65 E-value=13 Score=29.97 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=61.8
Q ss_pred ccCcCHHHHHHH---hhhCCCeEEEEeCCchHHHHHHHHHcCCcccceee--CCCCC--CCCChHHHHHHHHhcCCCCCc
Q 023578 143 QIMPGTAQLCGF---LDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALS--REFRP--YKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 143 ~~~pg~~~~l~~---L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~--~~~~~--~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.+.|+..+.++. |.+.|+++..+++.+.. .-..++.+|-. .+.- ...+. +-.+++.++.+.+..+++
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~-~akrl~~~G~~--aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP--- 189 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPI-IARQLAEIGCI--AVMPLAGLIGSGLGICNPYNLRIILEEAKVP--- 189 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHH-HHHHHHHSCCS--EEEECSSSTTCCCCCSCHHHHHHHHHHCSSC---
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHhCCC--EEEeCCccCCCCCCcCCHHHHHHHHhcCCCC---
Confidence 456777776555 45559999966655544 44566778864 2222 22332 234688898998877765
Q ss_pred EEEEc---CCchhhHHHHHHcCCcEEEEcC
Q 023578 216 VMMVG---DSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 216 ~v~iG---Ds~~~Di~~a~~~G~~~i~v~~ 242 (280)
|.++ .++ .|+..|.+.|...|+|+.
T Consensus 190 -VI~eGGI~TP-sDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 190 -VLVDAGVGTA-SDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp -BEEESCCCSH-HHHHHHHHHTCSEEEESH
T ss_pred -EEEeCCCCCH-HHHHHHHHcCCCEEEECh
Confidence 4445 567 899999999999999974
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=85.29 E-value=0.96 Score=35.57 Aligned_cols=41 Identities=17% Similarity=0.039 Sum_probs=35.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+.+...+.+++++++|++++++|+........+++.+|+.
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence 35677889999999999999999999988888888888875
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=85.15 E-value=0.25 Score=42.61 Aligned_cols=20 Identities=25% Similarity=0.532 Sum_probs=15.9
Q ss_pred ccEEEEeCCCcccCCCCCHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFP 87 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~ 87 (280)
+|.|+||+|||+++...+|.
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d 20 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFD 20 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHH
T ss_pred CceEEEecCceeechhhhcc
Confidence 47899999999997655443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=84.73 E-value=0.76 Score=37.46 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.9
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+.+...+.|++++++|++++++|++....+...++.+++.
T Consensus 22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 35677889999999999999999999988888888888875
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=82.18 E-value=2.2 Score=33.67 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=52.4
Q ss_pred CHHHHHHHhhhCCCeEEEEeCCc-hHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchh
Q 023578 147 GTAQLCGFLDSKKIRRGLITRNI-KEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKD 225 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~~-~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~ 225 (280)
++...|+.+++.+-++++++-.. ....+.+.+.+|++++...-.+. .+.+....-+++-|++ ++|||..
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~----ee~~~~i~~l~~~G~~----vVVG~~~-- 163 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITE----EDARGQINELKANGTE----AVVGAGL-- 163 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSH----HHHHHHHHHHHHTTCC----EEEESHH--
T ss_pred HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCH----HHHHHHHHHHHHCCCC----EEECCHH--
Confidence 34555555666677899998533 34456677888887433211100 0112222334445665 6999988
Q ss_pred hHHHHHHcCCcEEEEc
Q 023578 226 DVACGKRAGAFTCLLD 241 (280)
Q Consensus 226 Di~~a~~~G~~~i~v~ 241 (280)
-...|++.|+.++.+.
T Consensus 164 ~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 164 ITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHTTSEEEESS
T ss_pred HHHHHHHcCCcEEEEC
Confidence 5889999999999976
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=80.31 E-value=1.3 Score=35.93 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=36.5
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
.+.+...+.|++++++|++++++|+.....+..+++.+|+.
T Consensus 38 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 38 FLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp CCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 45677888999999999999999999988889999999876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 280 | ||||
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 4e-15 | |
| d1vjra_ | 261 | c.108.1.14 (A:) Hypothetical protein TM1742 {Therm | 3e-13 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 5e-13 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 1e-11 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 2e-11 | |
| d1wvia_ | 253 | c.108.1.14 (A:) Putative phosphatase SMU.1415c {St | 4e-11 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 1e-10 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 2e-10 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-10 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 6e-10 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 6e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 9e-10 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 2e-09 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 2e-09 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-09 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 4e-09 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 6e-09 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 8e-09 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 1e-08 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 1e-08 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 2e-08 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 2e-08 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 3e-08 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 4e-08 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 4e-08 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 5e-07 | |
| d2gmwa1 | 182 | c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate | 1e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-05 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 8e-05 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 4e-04 | |
| d1ltqa1 | 149 | c.108.1.9 (A:153-301) Polynucleotide kinase, phosp | 5e-04 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.002 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 0.002 |
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 71.0 bits (172), Expect = 4e-15
Identities = 33/242 (13%), Positives = 64/242 (26%), Gaps = 37/242 (15%)
Query: 69 RGVVFDMDGTL--TVPVID------------FPAMYRAVLGEDEYKRVKAENPTGIDILH 114
+ VVFD GTL V D ++R E + R +
Sbjct: 3 KAVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVT 62
Query: 115 HIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT---RNIKE 171
+ ++ P + ++R +++ ++ +
Sbjct: 63 REALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQ 122
Query: 172 AVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK 231
A+ + R +KP P + V P EV+ V + DV K
Sbjct: 123 ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN-GFDVGGAK 181
Query: 232 RAGAFTCLLDETGRYSA-------------------DDFTKSNLQPDFRVSSLTEVLSIL 272
G + + + PDF V +L ++ ++
Sbjct: 182 NFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241
Query: 273 EA 274
Sbjct: 242 RG 243
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Score = 65.8 bits (159), Expect = 3e-13
Identities = 35/191 (18%), Positives = 63/191 (32%), Gaps = 12/191 (6%)
Query: 88 AMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPG 147
+L R+ + + D + + + G D+
Sbjct: 78 ITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVL------GFDKTLTYER 131
Query: 148 TAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPY-----KPDPGPL 202
+ C L K + + G + + R KP+P +
Sbjct: 132 LKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVV 191
Query: 203 LHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV 262
I + V + MVGD L DV GK AG + L+ TG + +D ++ +PDF
Sbjct: 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVL-TGETTPEDLERAETKPDFVF 250
Query: 263 SSLTEVLSILE 273
+L E+ ++
Sbjct: 251 KNLGELAKAVQ 261
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 65.2 bits (157), Expect = 5e-13
Identities = 26/252 (10%), Positives = 64/252 (25%), Gaps = 53/252 (21%)
Query: 66 TRLRGVVFDMDGTLT----VPVIDFPAMYRAV---------------------------- 93
+ ++ D++GT T V I FP + V
Sbjct: 5 AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDA 64
Query: 94 -------------LGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLD 140
G D+ +++ + ++ + L++ G
Sbjct: 65 HLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRM 124
Query: 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF----SPALSREFRPYK 196
+ + ++ + + EA L +K
Sbjct: 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHK 184
Query: 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNL 256
+ I + N ++ + D + + + + A ++ G D K
Sbjct: 185 VESESYRKIADSIGCSTNNILFLTDVTR-EASAAEEADVHVAVVVRPGNAGLTDDEK--- 240
Query: 257 QPDFRVSSLTEV 268
++S +E+
Sbjct: 241 TYYSLITSFSEL 252
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 60.6 bits (145), Expect = 1e-11
Identities = 38/231 (16%), Positives = 66/231 (28%), Gaps = 30/231 (12%)
Query: 68 LRGVVFDMDGTLT---------------------VPVIDFPAMYRAVLGEDEYKRVKAEN 106
+R V FD GTL + Y + E
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 107 PTGIDILHHI-ESWSPDLQRHAYQTIADFERQGLDR-LQIMPGTAQLCGFLDSKKIRRGL 164
DI + + + + + R ++ P ++ L K +
Sbjct: 62 RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHVGMI 121
Query: 165 ITRNIKEAVDLFHNRFGITFSPALSREFR--PYKPDPGPLLHICSTWEVQPNEVMMVGDS 222
+ + + +++ +KP P V+ E + VGD+
Sbjct: 122 TDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDN 181
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
D K G + LLD G + DF VS L EV+ I++
Sbjct: 182 PVKDCGGSKNLGMTSILLDRKGEKREFWD-----KCDFIVSDLREVIKIVD 227
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 59.9 bits (143), Expect = 2e-11
Identities = 39/222 (17%), Positives = 75/222 (33%), Gaps = 24/222 (10%)
Query: 69 RGVVFDMDGTL--TVPVID-----FPAMYRAVLGED-----EYKRVKAENPTGIDILHHI 116
+G+ FD+ GTL V+ FP R + EY +++ ++
Sbjct: 3 KGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQAT 62
Query: 117 ESWSPDLQRHAYQTIADFERQGLD----RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA 172
E RH + R L RL L + ++ +++ ++
Sbjct: 63 EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 122
Query: 173 VDLFHNRFGITF---SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVAC 229
+D + G+ + YKPD + + ++ V + D
Sbjct: 123 IDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASN-AWDATG 181
Query: 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271
+ G TC ++ TG + PD+ V+SL V+ +
Sbjct: 182 ARYFGFPTCWINRTGNVFEEMGQT----PDWEVTSLRAVVEL 219
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Score = 59.7 bits (143), Expect = 4e-11
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 192 FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDF 251
KP+ + V+ +E +MVGD+ D+ G + T L+ TG ++
Sbjct: 176 IIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLV-TTGFTKPEEV 234
Query: 252 TKSNLQPDFRVSSLTE 267
+QPDF +SSL E
Sbjct: 235 PALPIQPDFVLSSLAE 250
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.3 bits (139), Expect = 1e-10
Identities = 44/240 (18%), Positives = 86/240 (35%), Gaps = 35/240 (14%)
Query: 66 TRLRGVVFDMDGTL--TVPVID------FPAMYRAVLGEDEYKRVKAENPTGID------ 111
+R+R V FD+D TL T + ++E + + + +
Sbjct: 4 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 63
Query: 112 --------ILHHIESW------SPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDS 157
H E D ++ A + ++ L + + + L
Sbjct: 64 YSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK 123
Query: 158 KKIRRGLITRNIKEAVDL--FHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNE 215
+ L + + + + + E + KP P H C VQP +
Sbjct: 124 EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD 183
Query: 216 VMMVGDSLKDDVACGKRAGA-FTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
+MVGD+L+ D+ G AG T ++++GR + P + VSS+ E+ ++L++
Sbjct: 184 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTS----SPMPHYMVSSVLELPALLQS 239
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.1 bits (136), Expect = 2e-10
Identities = 30/225 (13%), Positives = 53/225 (23%), Gaps = 34/225 (15%)
Query: 71 VVFDMDGTLT----VPVIDFPAMYRAVLG---------EDEYKRVKAENPTGIDILHHIE 117
+ D++GT+ V FP V + + HI
Sbjct: 6 YLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHIL 65
Query: 118 SWSPDLQRHA--YQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDL 175
+ Q G + QI +K R + + +A L
Sbjct: 66 ELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQKL 125
Query: 176 FHNRFGITFSPALSR-------------EFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222
+PA K + +I + +EV+ + D+
Sbjct: 126 LFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSDN 185
Query: 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267
++ G T L G D Q +
Sbjct: 186 P-LELDAAAGVGIATGLASRPGNAPVPD-----GQKYQVYKNFET 224
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 56.7 bits (136), Expect = 6e-10
Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 33/165 (20%)
Query: 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFG----------------IT 183
L+ + L L G+ T + G +
Sbjct: 212 IILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE 271
Query: 184 FSPALSREFRPYKPDPGPLLH--------------ICSTWEVQPNEVMMVGDSLKDDVAC 229
+ KP+P + V ++V +VGDSL D+
Sbjct: 272 AENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLA-DLLS 330
Query: 230 GKRAGAFTCLLDETGRYSADDFTK-SNLQPDFRVSSLTEVLSILE 273
++ GA TG D + D+ ++ L E+ +L+
Sbjct: 331 AQKIGATFIGT-LTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 55.9 bits (133), Expect = 6e-10
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 192 FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDF 251
F KP P + + + E ++VGD+L+ D+ G +AG T L+ +G S DD
Sbjct: 172 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL-SGVSSLDDI 230
Query: 252 TKSNLQPDFRVSSLTEVLSI 271
+P + S+ E+ I
Sbjct: 231 DSMPFRPSWIYPSVAEIDVI 250
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 55.5 bits (132), Expect = 6e-10
Identities = 19/200 (9%), Positives = 57/200 (28%), Gaps = 23/200 (11%)
Query: 71 VVFDMDGTLT-------------VPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIE 117
+FD+ + + I ++ ++ + + + + + +
Sbjct: 3 YIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALC 62
Query: 118 SWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH 177
+ + P + L + R +++ + +
Sbjct: 63 HE----MALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118
Query: 178 NRFGITFSP----ALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA 233
+ LS++ KP+ H+ P++ + D+ D++ +
Sbjct: 119 EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNA-DNIEGANQL 177
Query: 234 GAFTCLLDETGRYSADDFTK 253
G + L+ + D F K
Sbjct: 178 GITSILVKDKTTI-PDYFAK 196
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 55.4 bits (132), Expect = 9e-10
Identities = 30/224 (13%), Positives = 56/224 (25%), Gaps = 27/224 (12%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR 125
TR ++ D DGT+T+ D E+ +K L E
Sbjct: 2 TRKPFIICDFDGTITMN--DNIINIMKTFAPPEWMALKDG--VLSKTLSIKEGVGRMFGL 57
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI--- 182
+ L+ +I G + F++ +I +I+ + V
Sbjct: 58 LPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR 117
Query: 183 -------------TFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVAC 229
S + + ++M+GDS DV
Sbjct: 118 IYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDS-VTDVEA 176
Query: 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
K + R + + E+ +E
Sbjct: 177 AKLSDLCFA------RDYLLNECREQNLNHLPYQDFYEIRKEIE 214
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 54.5 bits (129), Expect = 2e-09
Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 9/213 (4%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGE-----DEYKRVKAENPTGIDILHHIESWS 120
T + + FD+DGTL I + E + K ++ ++
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSK 61
Query: 121 PDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF 180
+ + ++ +G+ Q+ P L L S T++ A D+ N
Sbjct: 62 DQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLE 121
Query: 181 GITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL 240
F + + T ++ P + +++GD+ D+ + G +
Sbjct: 122 IHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKF-DMLGARETGIQKLAI 180
Query: 241 DETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
G D QPD+ EVL+ +
Sbjct: 181 -TWGFGEQADLLNY--QPDYIAHKPLEVLAYFQ 210
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 54.7 bits (130), Expect = 2e-09
Identities = 25/208 (12%), Positives = 64/208 (30%), Gaps = 1/208 (0%)
Query: 60 SPPKPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESW 119
+ P+T + + + D + ++ + ++ + K ++ I
Sbjct: 44 TTKSPETVAQRLANEFDIHVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEA 103
Query: 120 SPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR 179
+ + L +++ T + + + +
Sbjct: 104 GFEWDETNPDYVVVGLDTELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSV 163
Query: 180 FGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239
+ ++ KP + + V+ +V+MVGD+ + D+ G + G + L
Sbjct: 164 VTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLL 223
Query: 240 LDETGRYSADDFTKSNLQPDFRVSSLTE 267
+ +G P + V SL E
Sbjct: 224 V-TSGFTPKSAVPTLPTPPTYVVDSLDE 250
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 54.1 bits (128), Expect = 2e-09
Identities = 38/217 (17%), Positives = 65/217 (29%), Gaps = 17/217 (7%)
Query: 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAE--------------NPTGIDIL 113
+ V+FD+DG +T ++A+ E V +
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61
Query: 114 HHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKE-A 172
+ + Q + + PG QL L S KI+ L + +
Sbjct: 62 KKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF 121
Query: 173 VDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKR 232
+ N G + A E KP P + V P+E + + DS + K
Sbjct: 122 LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQA-GIQAIKD 180
Query: 233 AGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269
+GA + D + + + L EV
Sbjct: 181 SGALPIGVGRPEDLGDDIVIVPDT-SHYTLEFLKEVW 216
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 52.8 bits (125), Expect = 4e-09
Identities = 24/176 (13%), Positives = 60/176 (34%), Gaps = 2/176 (1%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRH 126
+ ++D+ GTL A + L + + + +
Sbjct: 2 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPNLE 61
Query: 127 AY-QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS 185
+ + + E + L+ + G + L + ++ R L++ + +++ +
Sbjct: 62 NFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYF 121
Query: 186 PALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
+ +K P P + + Q + +++GD D+ G+ AG T L
Sbjct: 122 TEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIGDRPI-DIEAGQAAGLDTHLFT 176
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 52.9 bits (125), Expect = 6e-09
Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 25/225 (11%)
Query: 71 VVFDMDGTL--TVPVID------FPAMYRAVLGEDEYKRVKAENPTGI-DILHHIESWSP 121
V+FD+DGTL + +Y + + I ++L ++
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 64
Query: 122 DLQRHAYQTIADF-----ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLF 176
++ + + ER + + ++ G +L L S+ + EA
Sbjct: 65 EIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRH 124
Query: 177 HNRFGITFSPALSREFRPYKPDPGPLLH-------ICSTWEVQPNEVMMVGDSLKDDVAC 229
+ F D L H + P++++++GD+ D+ C
Sbjct: 125 KLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEH-DIRC 183
Query: 230 GKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
+ A + + TG ++ ++ + +P + E +L +
Sbjct: 184 ARELDARSIAVA-TGNFTMEELARH--KPGTLFKNFAETDEVLAS 225
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.4 bits (124), Expect = 8e-09
Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 30/205 (14%)
Query: 69 RGVVFDMDGTLT----------------VPVIDFPAMYRAVLGEDEYKRVKAENPTGIDI 112
R FD+DG L +P Y+ E +++ T
Sbjct: 1 RVAAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQW 60
Query: 113 LHHIESWSPDLQRH------AYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLIT 166
+ ++ + +I+ Q + I Q L K ++T
Sbjct: 61 VPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVT 120
Query: 167 RNIKEAVDLFHNRFGITF-------SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219
N + D + + S + KP+P + T + +PNEV+ +
Sbjct: 121 NNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFL 180
Query: 220 GDSLKDDVACGKRAGAFTCLLDETG 244
D ++ + G T L+ T
Sbjct: 181 DDFGS-NLKPARDMGMVTILVHNTA 204
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (123), Expect = 1e-08
Identities = 32/215 (14%), Positives = 63/215 (29%), Gaps = 18/215 (8%)
Query: 67 RLRGVVFDMDGTL--TVPVI-----------DFPAMYRAVLGEDEYKRVKAENPTGIDIL 113
++ +FDMDG L + P+ R L + R+
Sbjct: 2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQ 61
Query: 114 HHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV 173
++ + L + LC ++ E V
Sbjct: 62 PWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKV 121
Query: 174 DLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA 233
+ + A + + KP P L + V P + + DS+ + + K A
Sbjct: 122 LTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSV-NGMIASKAA 180
Query: 234 GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268
+ ++ + F + ++SSLTE+
Sbjct: 181 RMRSIVVPAPEAQNDPRFV----LANVKLSSLTEL 211
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 51.8 bits (122), Expect = 1e-08
Identities = 37/226 (16%), Positives = 68/226 (30%), Gaps = 21/226 (9%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGE-----DEYKRVKAENPTGIDILHHIESWS 120
T+ + + FD+DGTL + D + L + V G D+L
Sbjct: 2 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDW 61
Query: 121 PDLQRHAYQTIADF-----------ERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNI 169
Q T +F + ++ P + L ++ ++T
Sbjct: 62 ACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKP 121
Query: 170 KEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDV 227
+ V FGI FS L + P + + ++ ++D+
Sbjct: 122 TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDI 181
Query: 228 ACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
AG L G +S PD+ ++L I +
Sbjct: 182 FAAHSAGCAVVGLT-YGYNYNIPIAQSK--PDWIFDDFADILKITQ 224
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 51.0 bits (120), Expect = 2e-08
Identities = 22/211 (10%), Positives = 63/211 (29%), Gaps = 20/211 (9%)
Query: 71 VVFDMDGTLTVPVIDFPAMYRAVLGE-------DEYKRVKAENPTGIDILHHIESWSPDL 123
++D+DGTL + + ++ + + ++ E + D+
Sbjct: 4 FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDV 63
Query: 124 QRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183
+ + + + L +S + + L
Sbjct: 64 EVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESY 123
Query: 184 FSPALSREFRPYKPDP-GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242
F+ L+ + + ++ +++ + +GD DV + +G + E
Sbjct: 124 FTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTL-DVEFAQNSGIQSINFLE 182
Query: 243 TGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ + + R+ +L ++ I E
Sbjct: 183 STY-----------EGNHRIQALADISRIFE 202
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 51.4 bits (121), Expect = 2e-08
Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 13/216 (6%)
Query: 71 VVFDMDGTLTVPVIDFPAMYRAVLGE-----DEYKRVKAENPTGIDILHHIESWSPDLQR 125
++FD DG L I + +L E + + + +
Sbjct: 5 IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFG---- 181
A + + + + + L R + + + +D+ + G
Sbjct: 65 SASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPY 124
Query: 182 --ITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239
A KP P LH + + V P+ V++V DS+ + + AG
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVH-GIHGARAAGMRVIG 183
Query: 240 LDETGRYSADDFTK-SNLQPDFRVSSLTEVLSILEA 274
+ ++ + +S + ++ +++ A
Sbjct: 184 FTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 219
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 50.9 bits (120), Expect = 3e-08
Identities = 31/254 (12%), Positives = 71/254 (27%), Gaps = 48/254 (18%)
Query: 67 RLRGVVFDMDGTL--TVPVIDFPAMYRAV------LGEDEYKRV--------------KA 104
++ V+F GT + +E ++
Sbjct: 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMP 60
Query: 105 ENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGL 164
+ + + D+Q + + G ++ L + I+ G
Sbjct: 61 RIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGS 120
Query: 165 ITRNIKEAVDLFHNRFGITFSPAL----SREFRPYKPDPGPLLHICSTWEVQPNE-VMMV 219
T +E +D+ + + +P P V P ++ V
Sbjct: 121 TTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKV 180
Query: 220 GDSLKDDVACGKRAGAFTCLL-----------DETGRYSADDFTKS---------NLQPD 259
GD++ D G+ AG +T + +E + + +
Sbjct: 181 GDTVSDMKE-GRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239
Query: 260 FRVSSLTEVLSILE 273
F + ++ E+ S++E
Sbjct: 240 FTIETMQELESVME 253
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (119), Expect = 4e-08
Identities = 33/206 (16%), Positives = 60/206 (29%), Gaps = 30/206 (14%)
Query: 68 LRGVVFDMDGTLT----------------VPVIDFPAMYRAVLGEDEYKRVKAENPTGID 111
LR VFD+DG L +P ++ E R+ T
Sbjct: 2 LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61
Query: 112 ILHHIESWSPDLQRHAYQT------IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLI 165
+ +E A I + + + +I Q L K ++
Sbjct: 62 WIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAIL 121
Query: 166 TRNIKEAVDLFHNRFGITFSPA-------LSREFRPYKPDPGPLLHICSTWEVQPNEVMM 218
T + + S + KP+P + T + P+EV+
Sbjct: 122 TNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVF 181
Query: 219 VGDSLKDDVACGKRAGAFTCLLDETG 244
+ D ++ + G T L+ +T
Sbjct: 182 LDDIGA-NLKPARDLGMVTILVQDTD 206
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 50.3 bits (118), Expect = 4e-08
Identities = 41/211 (19%), Positives = 69/211 (32%), Gaps = 12/211 (5%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAEN----PTGIDILHHIESWSPD 122
+ ++FD+DGTLT + + R VL A+ P + +
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAAS 61
Query: 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKE--AVDLFHNRF 180
H D D++++ PG L L S+ + ++ E + +
Sbjct: 62 EFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFM 121
Query: 181 GITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL 240
+ + KPDP PLL V P + +GDS+ D + A L
Sbjct: 122 MRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVS-DEQTAQAANVDFGLA 180
Query: 241 DETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271
G D K R ++L +
Sbjct: 181 V-WGMDPNADHQK----VAHRFQKPLDILEL 206
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.4 bits (109), Expect = 5e-07
Identities = 23/177 (12%), Positives = 42/177 (23%), Gaps = 37/177 (20%)
Query: 66 TRL-RGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQ 124
TRL + VFD+D TL +D + S
Sbjct: 2 TRLPKLAVFDLDYTLWPFWVD------------------------THVDPPFHKSSDGTV 37
Query: 125 RHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITF 184
R +Q+ P ++ G L S + +R E
Sbjct: 38 RDRRG----------QNIQLYPEVPEVLGRLQSLGVPVAAASRT-SEIQGANQLLELFDL 86
Query: 185 SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
+ + V ++++ D ++ R G +
Sbjct: 87 GKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDE-NRNIIDVGRLGVTCIHIR 142
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Score = 45.4 bits (106), Expect = 1e-06
Identities = 31/203 (15%), Positives = 62/203 (30%), Gaps = 26/203 (12%)
Query: 71 VVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQT 130
+ D DGT+ +D ++ D ++ + + L + + +
Sbjct: 5 IFLDRDGTI---NVDHGYVHE----IDNFEFID-GVIDAMRELKKMGFALVVVTNQSGIA 56
Query: 131 IADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSR 190
F + L L R++ + +
Sbjct: 57 RGKFTEAQFETLTEWM--------------DWSLADRDVDLDGIYYCPHHPQGSVEEFRQ 102
Query: 191 EFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADD 250
KP PG LL + MVGD L+ D+ A T +L TG+ +
Sbjct: 103 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPE 161
Query: 251 FTKSNLQPDFRVSSLTEVLSILE 273
+ D+ ++SL ++ ++
Sbjct: 162 ---AENAADWVLNSLADLPQAIK 181
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 1e-05
Identities = 37/216 (17%), Positives = 66/216 (30%), Gaps = 29/216 (13%)
Query: 71 VVFDMDGTLT-VPVIDFPAMYRAVLGEDEYKRVKAENPTG-IDILHHIESWSPDLQRHAY 128
V FD+D T+ ID A V ED + G + + +Q
Sbjct: 13 VCFDVDSTVIREEGIDELAKICGV--EDAVSEMTRRAMGGAVPFKAALTERLALIQPSRE 70
Query: 129 QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPAL 188
Q Q + PG +L L + ++ LI+ + V+ ++ I +
Sbjct: 71 QVQRLIAEQ---PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVF 127
Query: 189 SREF-------------RPYKPDPGPLLHICSTW--EVQPNEVMMVGDSLKDDVACGKRA 233
+ + G + + +++M+GD D AC A
Sbjct: 128 ANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEAC-PPA 186
Query: 234 GAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269
AF R D + ++ E+L
Sbjct: 187 DAFIGFGGNVIRQQVKD------NAKWYITDFVELL 216
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 39.9 bits (92), Expect = 8e-05
Identities = 20/175 (11%), Positives = 43/175 (24%), Gaps = 29/175 (16%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAY 128
+ + D DGTL + + + + + LQ+ Y
Sbjct: 3 KYLFIDRDGTLI---------------SEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGY 47
Query: 129 QTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPAL 188
+L ++ L + G ++ + P L
Sbjct: 48 ------------KLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHL 95
Query: 189 SREFRPY-KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242
+ KP + + + ++GD D+ + G D
Sbjct: 96 PADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRAT-DIQLAENMGINGLRYDR 149
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 38.4 bits (88), Expect = 4e-04
Identities = 36/218 (16%), Positives = 63/218 (28%), Gaps = 29/218 (13%)
Query: 59 FSPPKPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIES 118
F P P + D DGT+ V + +Y +P I + +
Sbjct: 19 FPPHLP-----ALFLDRDGTINV--------------DTDYPS----DPAEIVLRPQMLP 55
Query: 119 WSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN 178
R + + G + ++ L + + L
Sbjct: 56 AIATANRAGIPVVVVTNQSG----IARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACA 111
Query: 179 RFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTC 238
P + KP+PG L+ + ++VGD L D+ GKRAG
Sbjct: 112 YHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLA-DMQAGKRAGLAQG 170
Query: 239 LLDETGRYSADDFTKSNLQPDFRVSSLTEVL-SILEAN 275
L + F L+ + L + ++ N
Sbjct: 171 WLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLGRDN 208
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Score = 37.4 bits (86), Expect = 5e-04
Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 41/184 (22%)
Query: 59 FSPPKPKTRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIES 118
+P KPK V+FD+DGTL R ++ NP +++
Sbjct: 2 GTPGKPKA----VIFDVDGTLAKMN------GRGPYDLEKCDTDVI-NPMVVELSKMYAL 50
Query: 119 WSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHN 178
QI+ + + G + T+ + +
Sbjct: 51 MGY---------------------QIVVVSGRESGT-------KEDPTKYYRMTRKWVED 82
Query: 179 RFGITFSPALSREFRPYKPDPGPLLHIC-STWEVQPNEVMMVGDSLKDDVACGKRAGAFT 237
G+ RE + D I + + + D + V +R G
Sbjct: 83 IAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQ-VVEMWRRIGVEC 141
Query: 238 CLLD 241
+
Sbjct: 142 WQVA 145
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 36.3 bits (82), Expect = 0.002
Identities = 31/219 (14%), Positives = 64/219 (29%), Gaps = 23/219 (10%)
Query: 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRH 126
+ + ++FD D TL V + R E+E K++ E G L +
Sbjct: 3 KKKLILFDFDSTL-VNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKD 61
Query: 127 AYQTIADFERQGL-------DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR 179
+ + + + ++ + + + + F NR
Sbjct: 62 LPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR 121
Query: 180 FGITFSPALSREFRPY---KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAF 236
+ L I + + + VGD +D++ K+AG
Sbjct: 122 LIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGA-NDISMFKKAGLK 180
Query: 237 TCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSILE 273
+ A K + D + L E+L ++
Sbjct: 181 IA-------FCAKPILKE--KADICIEKRDLREILKYIK 210
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.5 bits (84), Expect = 0.002
Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 42/197 (21%)
Query: 71 VVFDMDGTLT-VPVIDFPA------MYRAVLGEDEYKRVKAE-----NPTGIDILHHIES 118
++ D D TL+ + L DE +R + +D + +E
Sbjct: 40 IITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEE 99
Query: 119 WSPDLQRHAYQTIADFERQGLDRLQI-----------MPGTAQLCGFLDSKKIRRGLITR 167
P + ++ QG+ + ++ G G L I + +
Sbjct: 100 KFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA 159
Query: 168 NIKEAVDLFHNRFGITFSP----ALSREFRP---YKPDPGPLLH-------ICSTWE--- 210
I + ++ + G+ S + +F K G L+H +
Sbjct: 160 GIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFS 219
Query: 211 --VQPNEVMMVGDSLKD 225
+ ++++GDS D
Sbjct: 220 QLKDNSNIILLGDSQGD 236
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 280 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.98 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.97 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.97 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.96 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.96 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.96 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.95 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.94 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.94 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.9 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.89 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.89 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.88 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.88 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.88 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.88 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.87 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.86 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.86 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.85 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.82 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.81 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.8 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.78 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.72 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.69 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.65 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.63 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.56 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.54 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.52 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.52 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.5 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.5 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.43 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.43 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.4 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.35 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.27 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.22 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.08 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.05 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.04 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.02 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.91 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.76 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.61 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 98.52 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.49 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 98.2 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.94 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.85 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.82 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 89.03 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 83.15 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 83.14 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.98 E-value=9.1e-32 Score=214.71 Aligned_cols=197 Identities=21% Similarity=0.297 Sum_probs=158.0
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDR 141 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (280)
++|+|+||+||||+|+.+.+.+++++++ |.+. ....+..+.........+ .......+.....+.++.......
T Consensus 2 ~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 80 (207)
T d2hdoa1 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTEL-GIAASEFDHFQAQYEDVMASHYDQ 80 (207)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHT-TCCGGGHHHHHHHHHHHHTTCGGG
T ss_pred CCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhhhcc-ccchhhHHHHHHHhhhhhcccccc
Confidence 4899999999999999888888887776 4443 344444555544444433 234455556666666777777778
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEE
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMM 218 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~ 218 (280)
..++||+.++|+.|++ +++++|+||+....++..++++|+. |+.+++++ .+.+||+|++++.+++++|++|++|++
T Consensus 81 ~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 159 (207)
T d2hdoa1 81 IELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF 159 (207)
T ss_dssp CEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred cccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeE
Confidence 8999999999999986 6999999999999999999999998 89888865 778999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 219 VGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 219 iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
|||+. +|+.+|+++|+.+|++.++. ...... ..+++++.++.||+++
T Consensus 160 VgDs~-~Di~~a~~aG~~~i~v~~g~--~~~~~~---~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 160 IGDSV-SDEQTAQAANVDFGLAVWGM--DPNADH---QKVAHRFQKPLDILEL 206 (207)
T ss_dssp EESSH-HHHHHHHHHTCEEEEEGGGC--CTTGGG---SCCSEEESSGGGGGGG
T ss_pred ecCCH-HHHHHHHHcCCeEEEEecCC--CChhHh---hhcCcEeCCHHHHHhh
Confidence 99999 99999999999999998522 222222 3789999999998754
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.97 E-value=5.2e-31 Score=212.26 Aligned_cols=204 Identities=20% Similarity=0.311 Sum_probs=152.7
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhc-CCChhhHHHHhh---------ccChhHHHHHHHH
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAE-NPTGIDILHHIE---------SWSPDLQRHAYQT 130 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~ 130 (280)
+++|+|+||+||||+|+...+..++++.+ |.+. ....+.. +........... .+...........
T Consensus 2 ~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (224)
T d2hsza1 2 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ 81 (224)
T ss_dssp SSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHH
Confidence 35899999999999999887776666665 4433 2333332 222222111111 1122222222222
Q ss_pred HH-HHHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHH
Q 023578 131 IA-DFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHIC 206 (280)
Q Consensus 131 ~~-~~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~ 206 (280)
.. .+.+.......++||+.++|+.|+++|++++++||+....++..++.+|+. |+.+++++ .+..||+|+++..++
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~ 161 (224)
T d2hsza1 82 FGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLC 161 (224)
T ss_dssp HHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHH
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHH
Confidence 22 233445567789999999999999999999999999999999999999998 89988865 789999999999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
+++|+++++|++|||+. +|+.+|+++|+.+|++.++... ..+.. ..+++++++++.||+++|+
T Consensus 162 ~~~~~~~~~~~~igD~~-~Di~~A~~aG~~~i~v~~g~~~-~~~l~--~~~~d~~v~~l~dL~~iie 224 (224)
T d2hsza1 162 GKFGLYPKQILFVGDSQ-NDIFAAHSAGCAVVGLTYGYNY-NIPIA--QSKPDWIFDDFADILKITQ 224 (224)
T ss_dssp HHHTCCGGGEEEEESSH-HHHHHHHHHTCEEEEESSSCST-TCCGG--GGCCSEEESSGGGGGGGTC
T ss_pred HHhhhhhhccchhcCcH-HHHHHHHHcCCeEEEEeCCCCC-cchhh--hcCCCEEECCHHHHHHhhC
Confidence 99999999999999999 9999999999999999864322 22222 3689999999999998764
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=5.4e-31 Score=211.67 Aligned_cols=197 Identities=18% Similarity=0.232 Sum_probs=146.8
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCchH--HHHHh-cCCChhhHHHHhh---ccChhHHHHHHH-HHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDEY--KRVKA-ENPTGIDILHHIE---SWSPDLQRHAYQ-TIADFER 136 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~~--~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~ 136 (280)
+||+++||+||||+|+.+.+..++++.+ |.+.. ..+.. .+........... .+.........+ ....+..
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 81 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHHH
Confidence 5899999999999998887766666655 55432 22222 2333333332222 222222222222 2222322
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQP 213 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~ 213 (280)
.......++||+.++|+.|+++|++++|+||+.+..++..++.+|+. |+.+++++ .+.+||+|++|+.+++++|++|
T Consensus 82 ~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~ 161 (218)
T d1te2a_ 82 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDP 161 (218)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCG
T ss_pred hhhccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCc
Confidence 23334567899999999999999999999999999999999999998 99999976 7789999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 214 ~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
++|++|||+. +|+.+|+++|+.+|+|+++.. ..+.. ...++++++++.||
T Consensus 162 ~~~l~igD~~-~di~aA~~~G~~~i~v~~~~~--~~~~~--~~~a~~~i~~l~el 211 (218)
T d1te2a_ 162 LTCVALEDSV-NGMIASKAARMRSIVVPAPEA--QNDPR--FVLANVKLSSLTEL 211 (218)
T ss_dssp GGEEEEESSH-HHHHHHHHTTCEEEECCCTTT--TTCGG--GGGSSEECSCGGGC
T ss_pred hhcEEEeeCH-HHHHHHHHcCCEEEEECCCCC--ccchh--hcCCCEEECChhhC
Confidence 9999999999 999999999999999975322 22222 35899999999997
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=3.1e-30 Score=212.47 Aligned_cols=210 Identities=15% Similarity=0.166 Sum_probs=150.0
Q ss_pred CccEEEEeCCCcccCCCCC-HHHHHHHHh---CCch-HHHHH-hcCCChhhHHHHhhc---------------cChhHHH
Q 023578 67 RLRGVVFDMDGTLTVPVID-FPAMYRAVL---GEDE-YKRVK-AENPTGIDILHHIES---------------WSPDLQR 125 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~-~~~~~~~~~---g~~~-~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~ 125 (280)
++|+|+||+||||+|+... ...++.+.+ |.+. ...++ ..+....+....+.. .......
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ 80 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHH
Confidence 4899999999999997653 244444433 5543 22222 233333332222111 1122233
Q ss_pred HHHHHHHH-HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--c-cceeeCC-CCCCCCChH
Q 023578 126 HAYQTIAD-FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--F-SPALSRE-FRPYKPDPG 200 (280)
Q Consensus 126 ~~~~~~~~-~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--f-d~v~~~~-~~~~Kp~~~ 200 (280)
.......+ +.........++||+.++|+.|+++|++++|+||+....++..++.+|+. | |.+++++ .+.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~ 160 (257)
T d1swva_ 81 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 160 (257)
T ss_dssp HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSH
T ss_pred HHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChH
Confidence 33333333 33444455689999999999999999999999999999999999999987 4 7777766 678999999
Q ss_pred HHHHHHHhcCCC-CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC-C--ccccc-----------------cCCCCCC
Q 023578 201 PLLHICSTWEVQ-PNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRY-S--ADDFT-----------------KSNLQPD 259 (280)
Q Consensus 201 ~~~~~~~~lgi~-~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~-~--~~~~~-----------------~~~~~~d 259 (280)
+|..+++++|+. +++|+||||+. +|+.+|+++|+.+|+|.++... + .+++. -...+||
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~-~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSH-HHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCCCcceEEEEeCCh-hhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999995 58999999999 9999999999999999864321 1 00000 0135699
Q ss_pred EEEcCHHHHHHHHHhccC
Q 023578 260 FRVSSLTEVLSILEANFD 277 (280)
Q Consensus 260 ~v~~~~~dl~~~l~~~~~ 277 (280)
|+++++.||+.+|+.+.+
T Consensus 240 ~vi~~l~eL~~ii~~~~~ 257 (257)
T d1swva_ 240 FTIETMQELESVMEHIEK 257 (257)
T ss_dssp EEESSGGGHHHHHHHHTC
T ss_pred EEECCHHHHHHHHHHHhC
Confidence 999999999999998753
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=6.1e-30 Score=204.25 Aligned_cols=199 Identities=19% Similarity=0.248 Sum_probs=150.1
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhc-CCChhhHHHHhhccChhHHHHHHHHHHH-HHHhcC
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAE-NPTGIDILHHIESWSPDLQRHAYQTIAD-FERQGL 139 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 139 (280)
++|+|+||+||||+|+...+..++.+.+ |.+. ...++.. +.......... +.............. +.....
T Consensus 3 ~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 80 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC--LSKDQISEAVQIYRSYYKAKGI 80 (210)
T ss_dssp TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT--SCGGGHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhcccc--ccchhhHHHHHHHHHHHHhhhh
Confidence 5899999999999999887666666654 5443 3344432 33333322222 233344444333333 444455
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
....++||+.++++.++.+ ++++++||+.....+..++.+|+. |+.+++++. .+||+|+++..+++++|++|++++
T Consensus 81 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~-~~~~~p~~~~~~~~~~~~~~~~~v 158 (210)
T d2ah5a1 81 YEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSP-EAPHKADVIHQALQTHQLAPEQAI 158 (210)
T ss_dssp GSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECS-SCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred hcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhcccccccccccccc-cccccccccchhhhhhhcccccce
Confidence 6778999999999999987 599999999999999999999999 888887653 358889999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
+|||+. +|+.+|+++|+++|+|.++.. ...+.. ..+|+++++++.||.++|+
T Consensus 159 ~VGDs~-~Di~aa~~aGi~~i~v~~g~~-~~~~l~--~~~pd~vi~~l~el~~~le 210 (210)
T d2ah5a1 159 IIGDTK-FDMLGARETGIQKLAITWGFG-EQADLL--NYQPDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp EEESSH-HHHHHHHHHTCEEEEESSSSS-CHHHHH--TTCCSEEESSTTHHHHHTC
T ss_pred eecCCH-HHHHHHHHcCCeEEEEcCCCC-CHHHHH--hCCCCEEECCHHHHHHHhC
Confidence 999999 999999999999999985221 222333 3689999999999998764
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=2.7e-30 Score=205.54 Aligned_cols=192 Identities=17% Similarity=0.201 Sum_probs=144.1
Q ss_pred cEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHh-cCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCc
Q 023578 69 RGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKA-ENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRL 142 (280)
Q Consensus 69 k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
++++||+||||+|+...+..++.+.+ |.+. ...... .+.........+........+........+........
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKNAQV 81 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCCHHHHHHHHHHHHTTCGGGC
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhhHHHHHHHHHHHHHhhcccC
Confidence 68999999999999887666666654 5543 111111 22222333333221111112223333344555555677
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
.++||+.++|+.|+++|++++|+||+... ....++++|+. |+.+++++ .+.+||+|++|+.+++++|++|++|++|
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~V 160 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 160 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred cccchHHhhhhcccccccchhhhcccchh-hhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEE
Confidence 89999999999999999999999998764 56688999999 89998866 7899999999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
||+. +|+.+|+++|+.+|++.++ . ..+++.+.++.|+.++++
T Consensus 161 gD~~-~Di~~A~~~G~~~i~v~~~----~-------~~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 161 GDRT-LDVEFAQNSGIQSINFLES----T-------YEGNHRIQALADISRIFE 202 (204)
T ss_dssp ESSH-HHHHHHHHHTCEEEESSCC----S-------CTTEEECSSTTHHHHHTS
T ss_pred eCCH-HHHHHHHHcCCeEEEEcCC----C-------CCcCeecCCHHHHHHHhc
Confidence 9999 9999999999999998742 1 367788999999988775
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=1.1e-28 Score=201.87 Aligned_cols=135 Identities=23% Similarity=0.309 Sum_probs=113.7
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....++||+.++|+.|++ |++++++||+....++..++.+|+. |+.+++++ .+.+||+|++|+.+++++|++|++
T Consensus 105 ~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~ 183 (247)
T d2gfha1 105 LQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD 183 (247)
T ss_dssp HHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred hccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHh
Confidence 3456789999999999985 7999999999999999999999998 89887755 788999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
|+||||+..+|+.+|+++|+.++.+..++... ... ....|++++.++.||.++|+++..
T Consensus 184 ~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~--~~~-~~~~p~~~i~~l~eL~~ll~~i~~ 242 (247)
T d2gfha1 184 CVMVGDTLETDIQGGLNAGLKATVWINKSGRV--PLT-SSPMPHYMVSSVLELPALLQSIDC 242 (247)
T ss_dssp EEEEESCTTTHHHHHHHTTCSEEEEECTTCCC--CSS-CCCCCSEEESSGGGHHHHHHHHTT
T ss_pred cceeccChHhHHHHHHHcCCeEEEEECCCCCC--ccc-ccCCCCEEECCHHHHHHHHHHHhh
Confidence 99999997479999999999855443222221 111 246899999999999999998754
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.96 E-value=4e-29 Score=202.40 Aligned_cols=129 Identities=27% Similarity=0.347 Sum_probs=113.7
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.++|+.|++ |++++++||+....++..++.+|+. |+.+++++ .+.+||+|++|+.+++++|++|++|+
T Consensus 98 ~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l 176 (230)
T d1x42a1 98 YGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (230)
T ss_dssp HCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred hCcccccHHHHHHHhhc-cCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhcccccccc
Confidence 45689999999999975 6999999999999999999999998 89988864 78899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
+|||+..+|+++|+++|+.++++++.+. .... ...+|+++.|+.||.++|+++
T Consensus 177 ~vgD~~~~Di~~A~~~G~~~v~v~~~~~--~~~~---~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 177 YVGDNPVKDCGGSKNLGMTSILLDRKGE--KREF---WDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp EEESCTTTTHHHHHTTTCEEEEECTTSC--CGGG---GGGSSEEESSTTHHHHHHHHH
T ss_pred eeecCcHhHHHHHHHcCCEEEEECCCCC--Cccc---ccCCCEEECCHHHHHHHHHHc
Confidence 9999864799999999999999985332 1222 247899999999999999986
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.96 E-value=2.5e-28 Score=196.04 Aligned_cols=128 Identities=20% Similarity=0.316 Sum_probs=113.5
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....++|++.++++.+++.|++++++||+.....+..++..++. ||.+++++ .+..||+|+.|+.+++++|++|++
T Consensus 89 ~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e 168 (220)
T d1zrna_ 89 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 168 (220)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred hccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence 345678999999999999999999999999999999999999988 89988864 889999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
|+||||+. .|+.+|+++||.+|+|++++.... + ....||++++|+.||+++
T Consensus 169 ~l~VgD~~-~Di~~A~~aG~~~v~v~r~~~~~~-~---~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 169 ILFVASNA-WDATGARYFGFPTCWINRTGNVFE-E---MGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp EEEEESCH-HHHHHHHHHTCCEEEECTTCCCCC-S---SSCCCSEEESSHHHHHTT
T ss_pred EEEEecCh-HhHHHHHHcCCEEEEEcCCCCCcc-c---ccCCCCEEECCHHHHHhh
Confidence 99999999 999999999999999986444322 2 235799999999999864
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.96 E-value=1.1e-28 Score=199.61 Aligned_cols=205 Identities=17% Similarity=0.230 Sum_probs=145.3
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh----CCchH-HHHHhcCCChhhHHHH-hhc--cChhH----HHHHHHHHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL----GEDEY-KRVKAENPTGIDILHH-IES--WSPDL----QRHAYQTIADFE 135 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~----g~~~~-~~~~~~~~~~~~~~~~-~~~--~~~~~----~~~~~~~~~~~~ 135 (280)
.|+|+||+||||+|+...+..++.+.+ |.+.. ......+......... +.. +.... .+...+.+....
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIALF 81 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Confidence 589999999999999887766655543 43331 1111122222222222 221 12211 112222222222
Q ss_pred Hh-c-CCCcccCcCHHHHHHHhhhCC-CeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 136 RQ-G-LDRLQIMPGTAQLCGFLDSKK-IRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 136 ~~-~-~~~~~~~pg~~~~l~~L~~~g-~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
.. . .....++||+.++|+.|+++| ++++++||+....+...++.+|+. |+.+++++ ....||+|..+...+..+
T Consensus 82 ~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~ 161 (228)
T d2hcfa1 82 RERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRM 161 (228)
T ss_dssp HHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHH
T ss_pred HHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhh
Confidence 22 2 234678999999999999987 899999999999999999999998 89988866 667789888877666665
Q ss_pred ---CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 210 ---EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 210 ---gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
|++|++|+||||+. +|+.+|+++|+.+|+|..+ .+..+++. +.+||++++|+.||.++|.++.
T Consensus 162 ~~~~~~p~~~l~VGD~~-~Di~aA~~aG~~~i~v~~g-~~~~~~l~--~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 162 TGANYSPSQIVIIGDTE-HDIRCARELDARSIAVATG-NFTMEELA--RHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp HCCCCCGGGEEEEESSH-HHHHHHHTTTCEEEEECCS-SSCHHHHH--TTCCSEEESCSCCHHHHHHHHH
T ss_pred cccCCChhHheeecCCh-HHHHHHHHcCCEEEEEcCC-CCCHHHHh--hCCCCEEECCHHHHHHHHHHHh
Confidence 78999999999999 9999999999999999742 22333333 4689999999999999999874
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.96 E-value=4.4e-28 Score=197.62 Aligned_cols=134 Identities=22% Similarity=0.315 Sum_probs=113.6
Q ss_pred CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCc
Q 023578 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNE 215 (280)
Q Consensus 139 ~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~ 215 (280)
.....++|++.+.|++|+ ++.++++||+....+...++.+|+. ||.+++++ .+..||+|++|..+++++|++|++
T Consensus 89 ~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e 166 (245)
T d1qq5a_ 89 YNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAE 166 (245)
T ss_dssp GGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGG
T ss_pred ccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhh
Confidence 345688999999999886 5789999999999999999999988 89888865 889999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc-------------------cccccCCCCCCEEEcCHHHHHHHHHhc
Q 023578 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSA-------------------DDFTKSNLQPDFRVSSLTEVLSILEAN 275 (280)
Q Consensus 216 ~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~-------------------~~~~~~~~~~d~v~~~~~dl~~~l~~~ 275 (280)
|+||||+. +|+.+|+++||.+|+|++++.... .........||+++.++.||+++|+.+
T Consensus 167 ~l~VgD~~-~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 167 VLFVSSNG-FDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp EEEEESCH-HHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred EEEEeCCH-HHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence 99999999 999999999999999986432100 001112357999999999999999864
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.95 E-value=8.5e-28 Score=193.18 Aligned_cols=173 Identities=21% Similarity=0.252 Sum_probs=131.1
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHH-hcCCChhhHHHHhhc-----cChhHHHHHHHHHHHHH
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVK-AENPTGIDILHHIES-----WSPDLQRHAYQTIADFE 135 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 135 (280)
|+|+|+||+||||+|+...+.+++++++ |.+. ..... ..+.........+.. +..+..........+.+
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence 4799999999999998776677766655 5544 22222 234444444444432 23334444443333332
Q ss_pred Hhc---CCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhc
Q 023578 136 RQG---LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 136 ~~~---~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~l 209 (280)
... .....++||+.++|+.|+++|++++++||+.. ....++.+|+. |+.+++++ .+.+||+|++|+.+++++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~ 158 (221)
T d1o08a_ 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHT
T ss_pred cccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccccccccChHHHHHHHHHc
Confidence 222 23467899999999999999999999999754 57788999998 88888765 788999999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|++|++|++|||+. +|+++|+++|+.+|+|++
T Consensus 159 ~i~~~~~l~VgD~~-~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 159 GVAPSESIGLEDSQ-AGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp TCCGGGEEEEESSH-HHHHHHHHHTCEEEEESC
T ss_pred CCCCceEEEEecCH-HHHHHHHHcCCEEEEECC
Confidence 99999999999999 999999999999999975
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=5.1e-28 Score=194.63 Aligned_cols=202 Identities=19% Similarity=0.260 Sum_probs=147.0
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHH-HHhcCCChhhHHHHhhcc-----ChhHHHHHHHHHHHHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKR-VKAENPTGIDILHHIESW-----SPDLQRHAYQTIADFER 136 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 136 (280)
+|+|+||+||||+|+...+.+++++.+ |.+. ... .+..+.........+... ..+..+.. ...+..
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 78 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKS---EKLLDM 78 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHH---HHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccccccccchhHH---HHHHHH
Confidence 689999999999999887777777665 5543 222 223445555555544221 12222222 222333
Q ss_pred hcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cccee-eCC---CCCCCCChHHHHHHHHhcC
Q 023578 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPAL-SRE---FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 137 ~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~-~~~---~~~~Kp~~~~~~~~~~~lg 210 (280)
.......++||+.++++.|+. +.+++||+....++..++.+|+. |+.++ +++ ....||+|+.|..+++++|
T Consensus 79 ~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~ 155 (222)
T d2fdra1 79 RLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG 155 (222)
T ss_dssp HHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred HhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhC
Confidence 333456789999999998875 45799999999999999999999 77654 433 4678999999999999999
Q ss_pred CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccc-cCCCCCCEEEcCHHHHHHHHHhcc
Q 023578 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFT-KSNLQPDFRVSSLTEVLSILEANF 276 (280)
Q Consensus 211 i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~-~~~~~~d~v~~~~~dl~~~l~~~~ 276 (280)
++|++|++|||+. .|+.+|+++|+.+|++.++......... -...+|++++.|+.||..+|.++.
T Consensus 156 ~~p~~~l~vgDs~-~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~ 221 (222)
T d2fdra1 156 VSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA 221 (222)
T ss_dssp CCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred CCCceEEEEcCCH-HHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence 9999999999999 9999999999999999864322111111 013579999999999999998764
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=5.4e-27 Score=183.93 Aligned_cols=169 Identities=17% Similarity=0.247 Sum_probs=125.9
Q ss_pred CCccEEEEeCCCcccCCCCCHHHHHHHHh---CCch--HHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCC
Q 023578 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVL---GEDE--YKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLD 140 (280)
Q Consensus 66 ~~~k~iiFD~DGTL~d~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (280)
|++|+|+||+||||+|+...+..++++++ |.+. ....+..+.......+.+.... +...+.+.+.......
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPNL----ENFLEKYKENEARELE 76 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHHHCTTC----TTHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhhhhhhHHH----HHHHHHHHHHHHHHhh
Confidence 35899999999999998887777777765 4433 2222222222222222221111 1222233333333445
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
...++||+.++|+.|+++|++++++||+.....+ .++++++. |+.+++++ ....||+|++|+.+++++|+ ++|+
T Consensus 77 ~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l 153 (187)
T d2fi1a1 77 HPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGL 153 (187)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEE
T ss_pred cCcccchhHHHHHHHHhhhccccccccCccchhh-hhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeE
Confidence 6788999999999999999999999998876654 68899998 99998876 77899999999999999986 4699
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+|||+. .|+++|+++|+.++++++
T Consensus 154 ~vgDs~-~Di~aA~~aG~~~i~v~~ 177 (187)
T d2fi1a1 154 VIGDRP-IDIEAGQAAGLDTHLFTS 177 (187)
T ss_dssp EEESSH-HHHHHHHHTTCEEEECSC
T ss_pred EEeCCH-HHHHHHHHcCCEEEEECC
Confidence 999999 999999999999999873
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=8.2e-27 Score=190.09 Aligned_cols=131 Identities=10% Similarity=0.059 Sum_probs=110.0
Q ss_pred HHHhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceee-CC-CCCCCCChHHHHHHHHhc
Q 023578 134 FERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALS-RE-FRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 134 ~~~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~-~~-~~~~Kp~~~~~~~~~~~l 209 (280)
.+........++||+.+++++|+++|++++|+||+.....+..++..|+. |+.... .+ ....||+|.+|..+++++
T Consensus 118 ~~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~ 197 (253)
T d1zs9a1 118 AFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSI 197 (253)
T ss_dssp HHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHH
T ss_pred HHHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHh
Confidence 33445566788999999999999999999999999999999999999987 554332 23 567899999999999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 210 EVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 210 gi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
|++|++|+||||+. +|+.+|+++||.+|+|+++++....+.. ..++.+++||.||
T Consensus 198 ~~~p~~~l~vgD~~-~dv~aA~~aG~~ti~v~r~g~~~~~~~~---~~~~~~i~sl~EL 252 (253)
T d1zs9a1 198 GCSTNNILFLTDVT-REASAAEEADVHVAVVVRPGNAGLTDDE---KTYYSLITSFSEL 252 (253)
T ss_dssp TSCGGGEEEEESCH-HHHHHHHHTTCEEEEECCTTCCCCCHHH---HHHSCEESSGGGC
T ss_pred CCCcCcEEEEeCCH-HHHHHHHHcCCEEEEEeCCCCCCCchhh---cCCCcEECChHHh
Confidence 99999999999999 9999999999999999876544332222 4778899999886
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1.1e-23 Score=164.08 Aligned_cols=129 Identities=18% Similarity=0.191 Sum_probs=99.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCch---------------HHHHHHHHHcCCcccc-eeeC------------CC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIK---------------EAVDLFHNRFGITFSP-ALSR------------EF 192 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~---------------~~~~~~l~~~g~~fd~-v~~~------------~~ 192 (280)
.++++||+.++|+.|+++|++++++||.+. ......+...|+.++. .+|. +.
T Consensus 25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~ 104 (182)
T d2gmwa1 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVC 104 (182)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCC
T ss_pred HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccc
Confidence 457899999999999999999999999753 1223334445555333 3332 24
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCccccccCCCCCCEEEcCHHHHHHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFT-CLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSI 271 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~ 271 (280)
..+||+|.++..+++++++++++++||||+. +|+++|+++|+.+ +++.. +++..+.. ...+|++++++.|+.++
T Consensus 105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~-~Di~aA~~Ag~~~~~lv~~--g~~~~~~~--~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRT--GKPITPEA--ENAADWVLNSLADLPQA 179 (182)
T ss_dssp SSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESS--SSCCCHHH--HHHCSEEESCGGGHHHH
T ss_pred cccCCccccccchhhhcccccccccccCCCH-HHHHHHHHhCCCcEEEECC--CCCCCccc--ccCCCEEECCHHHHHHH
Confidence 4689999999999999999999999999999 9999999999976 55653 23322222 24799999999999999
Q ss_pred HHh
Q 023578 272 LEA 274 (280)
Q Consensus 272 l~~ 274 (280)
|++
T Consensus 180 ikk 182 (182)
T d2gmwa1 180 IKK 182 (182)
T ss_dssp HHC
T ss_pred hcC
Confidence 874
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=6e-24 Score=169.97 Aligned_cols=102 Identities=18% Similarity=0.211 Sum_probs=86.9
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHH----HHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV----DLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~----~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
....++||+.+++..|+++|++++++||+..... +......++. ||.+++++ .+.+||+|++|+.+++++|++
T Consensus 96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence 4557899999999999999999999998654432 3333344444 89988865 889999999999999999999
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|++|+||||+. .|+++|+++||.+|+|++
T Consensus 176 p~e~l~VgD~~-~Di~~A~~~G~~ti~v~~ 204 (225)
T d1zd3a1 176 PSEVVFLDDIG-ANLKPARDLGMVTILVQD 204 (225)
T ss_dssp GGGEEEEESCH-HHHHHHHHTTCEEEECSS
T ss_pred ccceeEEecCH-HHHHHHHHcCCEEEEECC
Confidence 99999999999 999999999999999874
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=6.1e-24 Score=170.21 Aligned_cols=102 Identities=20% Similarity=0.211 Sum_probs=89.6
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCc----hHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNI----KEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQ 212 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~----~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~ 212 (280)
....++|++.++|..|+++|++++++||+. ....+......|+. ||.+++++ .+.+||+|++|+.+++++|++
T Consensus 94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~ 173 (222)
T d1cr6a1 94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAK 173 (222)
T ss_dssp HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSC
T ss_pred hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCC
Confidence 456789999999999999999999999843 33445556667776 89988865 788999999999999999999
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 213 PNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 213 ~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|++|+||||+. .|+++|+++||.+|+|.+
T Consensus 174 p~~~l~IgD~~-~Di~~A~~aG~~ti~V~~ 202 (222)
T d1cr6a1 174 PNEVVFLDDFG-SNLKPARDMGMVTILVHN 202 (222)
T ss_dssp TTSEEEEESSS-TTTHHHHHHTCEEEECCS
T ss_pred cceEEEEECCH-HHHHHHHHcCCEEEEECC
Confidence 99999999999 999999999999999974
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.88 E-value=8.3e-23 Score=161.86 Aligned_cols=101 Identities=22% Similarity=0.284 Sum_probs=82.3
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCc---------------hHHHHHHHHHcCCcccceeeC-------------CC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNI---------------KEAVDLFHNRFGITFSPALSR-------------EF 192 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~---------------~~~~~~~l~~~g~~fd~v~~~-------------~~ 192 (280)
...++||+.++|+.|+++|++++|+||.+ ...+...++..|+.++.++.+ +.
T Consensus 46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 125 (209)
T d2o2xa1 46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDH 125 (209)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSC
T ss_pred HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccc
Confidence 45789999999999999999999999943 122344456666654443322 12
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
..+||+|.++..+++++|+++++|+||||+. +|+++|+++||.++++..
T Consensus 126 ~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~-~Di~aA~~AGi~~i~v~~ 174 (209)
T d2o2xa1 126 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVD 174 (209)
T ss_dssp TTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEET
T ss_pred ccccccchhhhHhHHHhCCCccceEEeCCCH-HHHHHHHHCCCcEEEEeC
Confidence 3569999999999999999999999999999 999999999999999874
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.88 E-value=4.5e-23 Score=157.89 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=85.3
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCch-HHHHHHHHHcCCc--ccceeeCCCCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIK-EAVDLFHNRFGIT--FSPALSREFRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~-~~~~~~l~~~g~~--fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
....++||+.++|+.|+++|++++|+||+.. ...+..++.+++. |+.+. ...||+|..+..+++++|++|++|
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~----~~~kp~~~~~~~~~~~~~~~~~~~ 118 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQRE----IYPGSKVTHFERLHHKTGVPFSQM 118 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEE----ESSSCHHHHHHHHHHHHCCCGGGE
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeee----cccCCChHHHHHHHHHhCCChHHE
Confidence 3567999999999999999999999998765 4566678888877 34333 245899999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+||||+. .|+++|+++|+.+|+|.+
T Consensus 119 l~igD~~-~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 119 VFFDDEN-RNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp EEEESCH-HHHHHHHTTTCEEEECSS
T ss_pred EEEcCCH-HHHHHHHHcCCEEEEECC
Confidence 9999999 999999999999999975
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=1.2e-22 Score=162.70 Aligned_cols=123 Identities=12% Similarity=0.140 Sum_probs=92.3
Q ss_pred HhcCCCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHH-----------HHcCCc--ccceeeCCCCCCCCChHHH
Q 023578 136 RQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFH-----------NRFGIT--FSPALSREFRPYKPDPGPL 202 (280)
Q Consensus 136 ~~~~~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l-----------~~~g~~--fd~v~~~~~~~~Kp~~~~~ 202 (280)
........+.+++.+++. .+...++.++.......... +.+|+. |+.+++++....||+|++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f 165 (225)
T d2g80a1 90 ESGQIKAPVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSY 165 (225)
T ss_dssp HTTSCCBCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHH
T ss_pred HhhcccccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHh
Confidence 333344455666665554 44567888888766555443 344555 8888887755679999999
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 203 LHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 203 ~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
..+++++|++|++|+||||+. +|+.+|+++||.+|+|+++|.... . ...+..++.+|.||
T Consensus 166 ~~~~~~lg~~p~e~l~VgD~~-~Dv~~A~~aG~~ti~v~r~g~~~~---~--~~~~~~~i~~~~eL 225 (225)
T d2g80a1 166 ANILRDIGAKASEVLFLSDNP-LELDAAAGVGIATGLASRPGNAPV---P--DGQKYQVYKNFETL 225 (225)
T ss_dssp HHHHHHHTCCGGGEEEEESCH-HHHHHHHTTTCEEEEECCTTSCCC---C--SSCCSCEESCSTTC
T ss_pred HHHHHhcccCchhceeecCCH-HHHHHHHHcCCEEEEEeCCCCCCC---c--ccCCCCccCChhhC
Confidence 999999999999999999999 999999999999999997544322 2 24667789998875
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=5.6e-23 Score=160.60 Aligned_cols=101 Identities=12% Similarity=0.224 Sum_probs=90.3
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHc-CCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRF-GIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEV 216 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~-g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~ 216 (280)
...+.+++.+++..++.+|++++++||+........+..+ ++. |+.+++++ .+..||+|++|+.+++++|++|++|
T Consensus 82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 161 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT 161 (197)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeE
Confidence 3578899999999999999999999998877666666654 565 89988765 8899999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 217 MMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 217 v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
+||||+. +|+++|+++|+.+|+|++
T Consensus 162 l~vgDs~-~di~~A~~aG~~ti~v~~ 186 (197)
T d2b0ca1 162 VFFDDNA-DNIEGANQLGITSILVKD 186 (197)
T ss_dssp EEEESCH-HHHHHHHTTTCEEEECCS
T ss_pred EEEeCCH-HHHHHHHHcCCEEEEECC
Confidence 9999999 999999999999999985
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=5.3e-22 Score=159.50 Aligned_cols=195 Identities=14% Similarity=0.131 Sum_probs=129.3
Q ss_pred CccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHh----cCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCc
Q 023578 67 RLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKA----ENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRL 142 (280)
Q Consensus 67 ~~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
+..+|+|||||||+++. .+...++.. +.+....+.. .................... ...+........
T Consensus 3 ~k~lVifD~DGTL~~~d-~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 74 (226)
T d2feaa1 3 RKPFIICDFDGTITMND-NIINIMKTF-APPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSL------KEEITSFVLEDA 74 (226)
T ss_dssp CCEEEEECCTTTTBSSC-HHHHHHHHH-SCTHHHHHHHHHHTTSSCHHHHHHHHHTTSBGGG------HHHHHHHHHHHC
T ss_pred CCeEEEEeCCCCCcCch-HHHHHHHHH-CcchHHHHHHHHHcCcccHHHHHHHHHHHhcccc------HHHHHHHHHhcc
Confidence 35789999999999875 234444444 5554322211 11111222221111111110 111111222345
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceee------C-----------CCCCCCCChHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALS------R-----------EFRPYKPDPGPLLHI 205 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~------~-----------~~~~~Kp~~~~~~~~ 205 (280)
+++||+.++++.|+++|++++++||+....++.+++++|+. +.+++ . .....++++.....+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~-~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCc-cceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence 68999999999999999999999999999999999999875 22221 1 122457788899999
Q ss_pred HHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHhccC
Q 023578 206 CSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277 (280)
Q Consensus 206 ~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~~~~ 277 (280)
++++++++++|+||||+. +|+.||++||+.++. . +......+ ...+...++++.|+...|+++.+
T Consensus 154 ~~~~~~~~~~~i~iGDs~-~Dl~~a~~A~~~~a~-~----~~~~~~~~-~~~~~~~~~d~~~i~~~l~~~~~ 218 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSV-TDVEAAKLSDLCFAR-D----YLLNECRE-QNLNHLPYQDFYEIRKEIENVKE 218 (226)
T ss_dssp HHHHCCTTCEEEEEECCG-GGHHHHHTCSEEEEC-H----HHHHHHHH-TTCCEECCSSHHHHHHHHHTSHH
T ss_pred HHHhcCCCceEEEEeCch-hhHHHHHHCCEEEEe-c----chHHHHHH-cCCCeeecCCHHHHHHHHHHHHH
Confidence 999999999999999999 999999999975432 2 22222222 34556678999999999987643
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=2.4e-21 Score=158.28 Aligned_cols=75 Identities=27% Similarity=0.356 Sum_probs=63.0
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
.+||+|.+++.+++++|++|++|+||||++.+|+.+|+++||.+|+|.++. ....++......||++++|+.||.
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~-~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGV-SSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSS-CCGGGGSSCSSCCSEEESSGGGCC
T ss_pred cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCC-CCHHHHHhCCCCCCEEECCHHHhC
Confidence 469999999999999999999999999997359999999999999997532 333344444567899999999964
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.86 E-value=2.1e-21 Score=159.59 Aligned_cols=79 Identities=30% Similarity=0.487 Sum_probs=66.5
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
.+||+|.++..+++++|++|++++||||+..+||.+|+++||.+|+|.+ |.+...+.......|||+++|+.||.++|+
T Consensus 183 ~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~-G~~~~~~~~~~~~~PD~ii~~l~eL~~~l~ 261 (261)
T d1vjra_ 183 AGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLT-GETTPEDLERAETKPDFVFKNLGELAKAVQ 261 (261)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESS-SSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred cCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECC-CCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 3699999999999999999999999999974699999999999999975 333333333334679999999999999874
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=6.9e-23 Score=155.67 Aligned_cols=102 Identities=17% Similarity=0.195 Sum_probs=81.6
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCc---------------hHHHHHHHHHcCCcccce-eeC-----CCCCCCCC
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNI---------------KEAVDLFHNRFGITFSPA-LSR-----EFRPYKPD 198 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~---------------~~~~~~~l~~~g~~fd~v-~~~-----~~~~~Kp~ 198 (280)
....++||+.++|+.|+++|++++++||.+ .......+...|+.++.+ ++. +...+||+
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~ 106 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPK 106 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTS
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccc
Confidence 356789999999999999999999999964 223455667777765443 332 35578999
Q ss_pred hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 199 PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 199 ~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
|.++..+++++|++|++++||||+. .|+++|+++||.++++++
T Consensus 107 p~~~~~~~~~~~id~~~~~~IGD~~-~Di~aA~~aG~~~i~i~~ 149 (161)
T d2fpwa1 107 VKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDR 149 (161)
T ss_dssp SGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBT
T ss_pred cHHHHHHHHhcCCChhcEEEECCCH-HHHHHHHHcCCeEEEECC
Confidence 9999999999999999999999999 999999999999999874
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=8.7e-21 Score=151.62 Aligned_cols=120 Identities=15% Similarity=0.267 Sum_probs=88.2
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeC--------C-CC--------CCCCChHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSR--------E-FR--------PYKPDPGPLL 203 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~--------~-~~--------~~Kp~~~~~~ 203 (280)
...++||+.++++.|+++|++++|+|++....++.+++.+|++.+.+++. . .+ ..+.|....+
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~ 159 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 159 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHH
Confidence 45689999999999999999999999999999999999999873333321 1 01 1122345555
Q ss_pred HHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHH
Q 023578 204 HICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 204 ~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~ 269 (280)
.+++++ ++++|++|||+. +|+.|++.+|+.++ ++. ....... +..+++++.|+.||+
T Consensus 160 ~~~~~~--~~~~~~~vGDs~-~Di~~~~~ag~~va-~~~--~~~~~~~---~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 160 LLKEKF--HFKKIIMIGDGA-TDMEACPPADAFIG-FGG--NVIRQQV---KDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHH--CCSCEEEEESSH-HHHTTTTTSSEEEE-ECS--SCCCHHH---HHHCSEEESCGGGGC
T ss_pred HHHhcc--CccccEEEEeCH-hhHHHHHhCCceEE-ECC--CHHHHHH---HHhCCCEeCCHHHhc
Confidence 555544 578999999999 99999999998654 431 1121222 347999999999874
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.81 E-value=2.3e-19 Score=141.60 Aligned_cols=123 Identities=18% Similarity=0.256 Sum_probs=97.5
Q ss_pred CCcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceee-----------CCCCCCCCChHHHHHHH
Q 023578 140 DRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALS-----------REFRPYKPDPGPLLHIC 206 (280)
Q Consensus 140 ~~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~-----------~~~~~~Kp~~~~~~~~~ 206 (280)
....+.+|+.+.++.++.+|..++++|+..........+..+.. +..... .....+++++..+...+
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence 45578999999999999999999999999999998888888776 222111 12335677889999999
Q ss_pred HhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHHH
Q 023578 207 STWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSIL 272 (280)
Q Consensus 207 ~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~l 272 (280)
++++++++++++|||+. ||+.|++.||+.+++ + +.+.++ ..|++++.+ +.+++++|
T Consensus 152 ~~~~~~~~~~i~iGDs~-nDi~m~~~ag~~va~-n-----a~~~lk---~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGA-NDISMFKKAGLKIAF-C-----AKPILK---EKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHTCCGGGEEEEESSG-GGHHHHHHCSEEEEE-S-----CCHHHH---TTCSEEECSSCGGGGGGGC
T ss_pred HHhcccccceEEecCCc-ChHHHHHHCCCCEEE-C-----CCHHHH---HhCCEEEcCCCHHHHHHHh
Confidence 99999999999999999 999999999997665 3 233443 479999984 45665544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.80 E-value=2.9e-19 Score=145.93 Aligned_cols=74 Identities=23% Similarity=0.282 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
.+||+|.+|+.+++++|++|++|+||||+..+|+++|+++||.+|+|..+ .....+..+....|||+++|+.|+
T Consensus 178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G-~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSG-FTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS-SSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCC-CCCHHHHHhcCCCCCEEECCHHHc
Confidence 48999999999999999999999999999735999999999999999753 223334444456799999999885
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.78 E-value=4e-20 Score=151.16 Aligned_cols=75 Identities=28% Similarity=0.371 Sum_probs=63.3
Q ss_pred CCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHH
Q 023578 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEV 268 (280)
Q Consensus 193 ~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl 268 (280)
..+||+|.+|+.+++++|++|++|+||||+..+|+++|+++||.+|+|.. |.+...+.......||++++|+.|+
T Consensus 177 ~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~-G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 177 IIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTT-GFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESS-SSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred EeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECC-CCCCHHHHhhcCCCCCEEECCHHHc
Confidence 35699999999999999999999999999984599999999999999985 3344444444456799999999885
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.72 E-value=3.6e-18 Score=127.94 Aligned_cols=101 Identities=13% Similarity=0.041 Sum_probs=75.4
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHH---HHHHHHH--------cCCcccceeeCCCCCCCCChHHHHHHHHhc
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEA---VDLFHNR--------FGITFSPALSREFRPYKPDPGPLLHICSTW 209 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~---~~~~l~~--------~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~l 209 (280)
...++||+.++++.|+++|++++++||..... ....++. .+..++.......+..+|+.......+.++
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 45689999999999999999999999965321 1222222 222244444555666677778888888888
Q ss_pred CCCCCcE-EEEcCCchhhHHHHHHcCCcEEEEcC
Q 023578 210 EVQPNEV-MMVGDSLKDDVACGKRAGAFTCLLDE 242 (280)
Q Consensus 210 gi~~~~~-v~iGDs~~~Di~~a~~~G~~~i~v~~ 242 (280)
..++.++ ++|||+. .|+++|+++|+.++.|..
T Consensus 114 ~~~~~~i~~~igD~~-~dv~a~~~~Gi~~~~V~~ 146 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVAS 146 (149)
T ss_dssp TTTTCEEEEEEECCH-HHHHHHHHTTCCEEECSC
T ss_pred ccCCCceEEEEcCCH-HHHHHHHHCCCcEEEeCC
Confidence 7766664 6789999 999999999999999973
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.69 E-value=2.3e-17 Score=142.13 Aligned_cols=132 Identities=18% Similarity=0.210 Sum_probs=108.8
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccc--eeeC------------CCCCCCCChHHHHHHH
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSP--ALSR------------EFRPYKPDPGPLLHIC 206 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~--v~~~------------~~~~~Kp~~~~~~~~~ 206 (280)
.|.||+.++|+.|+++|++++++||.....++..++.+|+. |+. ++++ .....||+|+.+..++
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~ 294 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence 35679999999999999999999999999999999999997 554 4432 1357899999999887
Q ss_pred Hh--------------cCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc---ccccCCCCCCEEEcCHHHHH
Q 023578 207 ST--------------WEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSAD---DFTKSNLQPDFRVSSLTEVL 269 (280)
Q Consensus 207 ~~--------------lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~---~~~~~~~~~d~v~~~~~dl~ 269 (280)
.. +++.+++|+||||+. +|+.+|+++|+.+|+|..+ ..+.. ++. +.+||++++|+.|+.
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~-~D~~aak~Ag~~~Igv~~G-~~g~~~~~el~--~~~AD~ii~~~~el~ 370 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTG-LKGKDAAGELE--AHHADYVINHLGELR 370 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCB-TTBGGGHHHHH--HTTCSEEESSGGGHH
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCH-HHHHHHHHCCCCEEEEecC-CCCcccHHHHH--hCCCCEEECCHHHHH
Confidence 54 456789999999999 9999999999999999752 11221 222 358999999999999
Q ss_pred HHHHhccCC
Q 023578 270 SILEANFDL 278 (280)
Q Consensus 270 ~~l~~~~~~ 278 (280)
.+|+.++.+
T Consensus 371 ~il~~l~~~ 379 (380)
T d1qyia_ 371 GVLDNLLEH 379 (380)
T ss_dssp HHHSCTTTT
T ss_pred HHHHHHHhc
Confidence 999988763
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=7.6e-16 Score=120.66 Aligned_cols=189 Identities=14% Similarity=0.179 Sum_probs=120.7
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHH---HHHHHHHhcCCCccc
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQ---TIADFERQGLDRLQI 144 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 144 (280)
+|+|+|||||||+++ .+....+.. |... ....+++...+.+.+.. ...-+.. ....+ .........
T Consensus 2 mkli~fDlDGTLl~e--~~~~~a~~~-Gi~~---~~~tgR~~~~~~~~~~~----~v~ll~~~~~~~~~~-~~~~~~~~~ 70 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE--IWIAFAEKT-GIDA---LKATTRDIPDYDVLMKQ----RLRILDEHGLKLGDI-QEVIATLKP 70 (206)
T ss_dssp CEEEEEESBTTTBCC--HHHHHHHHH-TCGG---GGCCTTTCCCHHHHHHH----HHHHHHHTTCCHHHH-HHHHTTCCC
T ss_pred cEEEEEcCccchHHH--HHHHHHHHc-CCHH---HHHHCCCCCCHHHHHHH----HHHHHHhCCCceehh-hhhhhhccc
Confidence 589999999999974 233322333 6643 23344433332222110 0000000 00111 112245567
Q ss_pred CcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--cc-ceeeCC----CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 145 MPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FS-PALSRE----FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 145 ~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd-~v~~~~----~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
.++....+..++ .+++.+++|++...........++.. +. ...... .....+++......++++|+++++++
T Consensus 71 ~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~evi 149 (206)
T d1rkua_ 71 LEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVI 149 (206)
T ss_dssp CTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEE
T ss_pred cchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccceE
Confidence 888888887765 67999999999999999999888876 11 111111 11334555677889999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEE-EcCHHHHHHHHHhccC
Q 023578 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFR-VSSLTEVLSILEANFD 277 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v-~~~~~dl~~~l~~~~~ 277 (280)
+|||+. ||++|.+.||+.+++ + .. ++... ..++++ ..+..|+.+.|.+..+
T Consensus 150 aiGDg~-NDi~Ml~~Ag~gIAm-n----a~-~~v~~--~~~~~~~~~~~~d~~~~~~~~~~ 201 (206)
T d1rkua_ 150 AAGDSY-NDTTMLSEAHAGILF-H----AP-ENVIR--EFPQFPAVHTYEDLKREFLKASS 201 (206)
T ss_dssp EEECSS-TTHHHHHHSSEEEEE-S----CC-HHHHH--HCTTSCEECSHHHHHHHHHHHCS
T ss_pred EecCCc-cCHHHHHhCCccEEE-C----CC-HHHHH--hCCCceeecCHHHHHHHHHHHhh
Confidence 999999 999999999998877 4 22 23332 367774 6789999988776654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.63 E-value=7.1e-16 Score=123.02 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=70.2
Q ss_pred chHHHHHHHHHcCCcccceeeC---C-CCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 023578 169 IKEAVDLFHNRFGITFSPALSR---E-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244 (280)
Q Consensus 169 ~~~~~~~~l~~~g~~fd~v~~~---~-~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~ 244 (280)
....++.+++.++..+....++ + ...+.+|+.+++.+++++|++++++++|||+. ||+.|++.+|+.+++ .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~-NDi~ml~~ag~~vav-~--- 194 (230)
T d1wr8a_ 120 NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE-NDLDAFKVVGYKVAV-A--- 194 (230)
T ss_dssp CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG-GGHHHHHHSSEEEEC-T---
T ss_pred cHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc-cHHHHHHHCCeEEEE-C---
Confidence 3445666777776552222111 2 33567889999999999999999999999999 999999999986554 2
Q ss_pred CCCccccccCCCCCCEEEcCHHH--HHHHHHhcc
Q 023578 245 RYSADDFTKSNLQPDFRVSSLTE--VLSILEANF 276 (280)
Q Consensus 245 ~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~~ 276 (280)
++.+..+ ..+++|+.+..+ +.+.|++++
T Consensus 195 -na~~~~k---~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 195 -QAPKILK---ENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp -TSCHHHH---TTCSEECSSCHHHHHHHHHHHHH
T ss_pred -CCCHHHH---HhCCEEECCCCcCHHHHHHHHHH
Confidence 3444444 489999987543 555555543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.56 E-value=3.5e-15 Score=119.08 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=56.3
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCH--HHHHHHHHh
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSL--TEVLSILEA 274 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~--~dl~~~l~~ 274 (280)
.|..+++.+++++|++++++++|||+. ||+.|++.+|..+++ . ++.+..++ .+++++.+. ..+.+.+++
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~-nD~~m~~~a~~~vav-~----na~~~~k~---~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSN-NDMPMFQLPVRKACP-A----NATDNIKA---VSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSG-GGHHHHTSSSEEEEC-T----TSCHHHHH---HCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHHhhhhccchhheeeecCCc-chHHHHHHCCeEEEE-C----CCcHHHHH---hCCEEECCCCcCHHHHHHHH
Confidence 456788999999999999999999999 999999999986554 2 34445554 789998665 557777776
Q ss_pred cc
Q 023578 275 NF 276 (280)
Q Consensus 275 ~~ 276 (280)
+.
T Consensus 222 ~~ 223 (225)
T d1l6ra_ 222 FE 223 (225)
T ss_dssp TT
T ss_pred hC
Confidence 64
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.54 E-value=2.6e-14 Score=117.77 Aligned_cols=70 Identities=20% Similarity=0.229 Sum_probs=57.1
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHh
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEA 274 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~ 274 (280)
.|..+++.+++++|++++++++|||+. ||+.|.+.+|..+++ .++.++.++ .|++++.+..+ +.+.|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~-ND~~Ml~~a~~svam-----~na~~~~k~---~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSL-NDKSMLEAAGKGVAM-----GNAREDIKS---IADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSG-GGHHHHHHSSEEEEC-----TTCCHHHHH---HCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCH-HHHHHHHhCCeEEEe-----CCCCHHHHH---hCCEEcCCCCccHHHHHHHH
Confidence 467788999999999999999999999 999999999987665 345555554 88999998664 6677666
Q ss_pred c
Q 023578 275 N 275 (280)
Q Consensus 275 ~ 275 (280)
+
T Consensus 284 l 284 (285)
T d1nrwa_ 284 L 284 (285)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.3e-14 Score=118.67 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=56.2
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhc
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEAN 275 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~ 275 (280)
|..+++.++++++++++++++|||+. ||+.|.+.+|..+++ .++.++.+. .+++++.+..+ +.+.|+++
T Consensus 198 K~~al~~l~~~~~i~~~~ii~~GD~~-ND~~ml~~~~~~~am-----~na~~~lk~---~a~~i~~~~~~~Gv~~~l~~~ 268 (271)
T d1rkqa_ 198 KGTGVKSLADVLGIKPEEIMAIGDQE-NDIAMIEYAGVGVAV-----DNAIPSVKE---VANFVTKSNLEDGVAFAIEKY 268 (271)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC-----TTSCHHHHH---HCSEECCCTTTTHHHHHHHHH
T ss_pred cccccceehhhcccchhcEEEEeCcH-hHHHHHHhCCcEEEe-----CCCCHHHHH---hCCEEcCCCCcChHHHHHHHH
Confidence 44578899999999999999999999 999999999987665 345556654 88999988766 77777665
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.52 E-value=1e-14 Score=112.65 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=77.3
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCc--------h----HHHHHHHHHcCCcccceeeCC-CCCCCCChHHHHHHHHhcC
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNI--------K----EAVDLFHNRFGITFSPALSRE-FRPYKPDPGPLLHICSTWE 210 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~--------~----~~~~~~l~~~g~~fd~v~~~~-~~~~Kp~~~~~~~~~~~lg 210 (280)
++|++.+.|+.|.++|+.++|+||.. . .....+++.++..++..++.. ...+||.+.++..++++++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n 130 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQAN 130 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSS
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhc
Confidence 47999999999999999999999942 1 224556677777655555543 6689999999999999985
Q ss_pred ----CCCCcEEEEcC-----------------CchhhHHHHHHcCCcEE
Q 023578 211 ----VQPNEVMMVGD-----------------SLKDDVACGKRAGAFTC 238 (280)
Q Consensus 211 ----i~~~~~v~iGD-----------------s~~~Di~~a~~~G~~~i 238 (280)
++.++++|||| |. .|++.|.++|+.+.
T Consensus 131 ~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~-sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 131 EGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSC-ADRLFALNVGLPFA 178 (195)
T ss_dssp SSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCC-HHHHHHHHHTCCEE
T ss_pred ccccCCcCceEEEeCccCccccccccccccCcch-hHHHHHHHCCCccc
Confidence 88999999999 56 89999999999864
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.50 E-value=4.7e-15 Score=113.41 Aligned_cols=110 Identities=11% Similarity=0.053 Sum_probs=88.9
Q ss_pred HHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHH
Q 023578 151 LCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230 (280)
Q Consensus 151 ~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a 230 (280)
.++.|+..|+.++++|+.....+....+.+++. .++. ..+++...++.+++++|+++++|+||||+. ||+++.
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~-nDl~~l 112 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFL----GKLEKETACFDLMKQAGVTAEQTAYIGDDS-VDLPAF 112 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEE----SCSCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhhccc--cccc----ccccHHHHHHHHHHHhcCCcceeEEecCCc-cHHHHH
Confidence 578899999999999999989999998898865 2221 125667889999999999999999999999 999999
Q ss_pred HHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC------HHHHHHHHHhc
Q 023578 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS------LTEVLSILEAN 275 (280)
Q Consensus 231 ~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~------~~dl~~~l~~~ 275 (280)
+.+|+.++.- ++..+.+ ..+++|+.+ +.|+.++|-..
T Consensus 113 ~~~g~siap~-----nA~~~vk---~~A~~Vt~~~GG~GavrE~~e~il~~ 155 (177)
T d1k1ea_ 113 AACGTSFAVA-----DAPIYVK---NAVDHVLSTHGGKGAFREMSDMILQA 155 (177)
T ss_dssp HHSSEEEECT-----TSCHHHH---TTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred hhCCeEEEcC-----CccHHHH---HhCCEEeCCCCCCchHHHHHHHHHHH
Confidence 9999877652 3444444 599999987 77777776543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=8.3e-15 Score=119.86 Aligned_cols=71 Identities=18% Similarity=0.363 Sum_probs=59.0
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHhc
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEAN 275 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~~ 275 (280)
|..+++.+++++|++++++++|||+. ||+.|.+.+|..+++ .++.+++++ .|++|+.+.++ +.+.|+++
T Consensus 191 K~~al~~l~~~lgi~~~~vi~~GD~~-ND~~Ml~~ag~~vam-----~Na~~~lk~---~A~~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 191 KANGISRLLKRWDLSPQNVVAIGDSG-NDAEMLKMARYSFAM-----GNAAENIKQ---IARYATDDNNHEGALNVIQAV 261 (269)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHCSEEEEC-----TTCCHHHHH---HCSEECCCGGGTHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccccEEEEcCCc-chHHHHHhCCeEEEe-----CCCCHHHHH---hCCEEcCCCCccHHHHHHHHH
Confidence 66789999999999999999999999 999999999998776 345555554 88999998776 77777766
Q ss_pred cC
Q 023578 276 FD 277 (280)
Q Consensus 276 ~~ 277 (280)
++
T Consensus 262 l~ 263 (269)
T d1rlma_ 262 LD 263 (269)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.43 E-value=9e-14 Score=114.10 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=59.0
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH---HHHHHH
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE---VLSILE 273 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d---l~~~l~ 273 (280)
.|..++..++++++++++++++|||+. ||+.|.+.+|..+++ .++.++.++ .+++++.+-.+ +..+|+
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~-ND~~Ml~~a~~~va~-----~na~~~~k~---~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAE-NDIAMLSNFKYSFAV-----ANATDSAKS---HAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHSCSEEEEC-----TTCCHHHHH---HSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCCh-hhHHHHHhCCcEEEe-----CCCCHHHHH---hCCEEECCcCCCcHHHHHHH
Confidence 356678889999999999999999999 999999999987665 345555554 88999975432 788898
Q ss_pred hccCC
Q 023578 274 ANFDL 278 (280)
Q Consensus 274 ~~~~~ 278 (280)
++++|
T Consensus 278 ~~~~~ 282 (283)
T d2b30a1 278 KVFDL 282 (283)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 88876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.43 E-value=5.4e-14 Score=114.51 Aligned_cols=70 Identities=14% Similarity=0.245 Sum_probs=56.7
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHHHHh
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSILEA 274 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~l~~ 274 (280)
.|..+++.+++++|++++++++|||+. ||+.|.+.+|..+++ . ++.++.++ .+++|+.+..+ +.+.|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~-ND~~Ml~~a~~svav-~----na~~~lk~---~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGG-NDISMLRHAAIGVAM-G----QAKEDVKA---AADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC-T----TSCHHHHH---HSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCc-ccHHHHHhCCeEEEe-C----CCCHHHHH---hCCEEeCCCCccHHHHHHHH
Confidence 466789999999999999999999999 999999999996554 3 45555554 88999998755 7777766
Q ss_pred c
Q 023578 275 N 275 (280)
Q Consensus 275 ~ 275 (280)
+
T Consensus 257 ~ 257 (260)
T d2rbka1 257 F 257 (260)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.40 E-value=6.6e-13 Score=106.35 Aligned_cols=63 Identities=17% Similarity=0.161 Sum_probs=48.2
Q ss_pred ChHHHHHHHHhcC-CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 198 DPGPLLHICSTWE-VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 198 ~~~~~~~~~~~lg-i~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
|..+++.+++++| +.++++++|||+. ||++|.+.+|..+++- ++.. +..-.+.++.|+.++|+
T Consensus 180 K~~al~~l~~~~~~~~~~~~~a~GD~~-ND~~Ml~~a~~~va~~-----Na~~-------~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 180 KGKAAKILLDFYKRLGQIESYAVGDSY-NDFPMFEVVDKVFIVG-----SLKH-------KKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEEECSG-GGHHHHTTSSEEEEES-----SCCC-------TTCEEESCHHHHHHHHT
T ss_pred cHHHHHHHHHHhcCCCcccEEEEcCCH-hHHHHHHcCCcEEEeC-----CCCh-------HHHhhhhHHHHHHHhhC
Confidence 3446778888885 8889999999999 9999999999876662 3332 22234889999888763
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.35 E-value=1.4e-12 Score=100.70 Aligned_cols=152 Identities=14% Similarity=0.051 Sum_probs=94.4
Q ss_pred ccEEEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHHHhcCCCcccCcC
Q 023578 68 LRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPG 147 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg 147 (280)
+.+|+||+|.|++|+.+.+........ .... ... .....+..+...+.....+.||
T Consensus 35 P~AIifDIDETvLdnspy~~~~~~~~~-~~~~-----------~y~------------~~~~~W~~~~~~~~~~A~p~pg 90 (209)
T d2b82a1 35 PMAVGFDIDDTVLFSSPGFWRGKKTFS-PESE-----------DYL------------KNPVFWEKMNNGWDEFSIPKEV 90 (209)
T ss_dssp CCEEEECCBTTTEECHHHHHHHHHHHC-TTSS-----------GGG------------GCHHHHHHHHTTGGGGCEECHH
T ss_pred CceEEEcchhhhhcCcHHHHhhhhhcC-cCcc-----------ccc------------CCCcchHHHhcccccccCcchh
Confidence 459999999999988765554444331 1000 000 0001122222222234568899
Q ss_pred HHHHHHHhhhCCCeEEEEeCCchH---HHHHHH-HHcCCcc----cceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 148 TAQLCGFLDSKKIRRGLITRNIKE---AVDLFH-NRFGITF----SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 148 ~~~~l~~L~~~g~~i~ivS~~~~~---~~~~~l-~~~g~~f----d~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
+.++++.++++|++|+.+||+... .....+ +.+|+.+ +.++.++. ..|.. -...++++++ ++++
T Consensus 91 a~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~-~~K~~---rr~~Ik~y~I----~l~~ 162 (209)
T d2b82a1 91 ARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK-PGQNT---KSQWLQDKNI----RIFY 162 (209)
T ss_dssp HHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-TTCCC---SHHHHHHTTE----EEEE
T ss_pred HHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC-CCchH---HHHHHHHcCe----EEEe
Confidence 999999999999999999996432 333444 5588862 22333322 22332 2333466776 7899
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCCCCccccc
Q 023578 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFT 252 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~ 252 (280)
||+. +|+.+|.++|+..|.+-+.........+
T Consensus 163 GD~l-~Df~aA~eagi~~iRi~r~~~s~y~p~p 194 (209)
T d2b82a1 163 GDSD-NDITAARDVGARGIRILRASNSTYKPLP 194 (209)
T ss_dssp ESSH-HHHHHHHHTTCEEEECCCCTTCSSCSCC
T ss_pred cCCH-HHHhHHHHcCCCceEeeccCCCCCCCch
Confidence 9999 9999999999999999765444433333
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.27 E-value=8.3e-12 Score=101.66 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=62.0
Q ss_pred CCCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHH--HHHH
Q 023578 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE--VLSI 271 (280)
Q Consensus 194 ~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~d--l~~~ 271 (280)
.+-.|..+++.+++++|++++++++|||+. ||+.|.+.+|..+++ +++.++.++ .|++++.+..+ +...
T Consensus 187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~-ND~~ml~~~~~sva~-----~na~~~~k~---~A~~i~~~~~~~Gva~~ 257 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNE-NDLFMFEEAGLRVAM-----ENAIEKVKE---ASDIVTLTNNDSGVSYV 257 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSH-HHHHHHTTCSEEEEC-----TTSCHHHHH---HCSEECCCTTTTHHHHH
T ss_pred CCCchhHHHHHHHHhhccCcccEEEEcCCc-chHHHHHhCCcEEEe-----CCCCHHHHH---hCCEEcCCCCccHHHHH
Confidence 344677899999999999999999999999 999999999987655 355555654 89999998876 8888
Q ss_pred HHhccC
Q 023578 272 LEANFD 277 (280)
Q Consensus 272 l~~~~~ 277 (280)
|++++.
T Consensus 258 i~~ll~ 263 (267)
T d1nf2a_ 258 LERIST 263 (267)
T ss_dssp HTTBCB
T ss_pred HHHHHh
Confidence 877653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=4.9e-11 Score=94.33 Aligned_cols=40 Identities=10% Similarity=0.061 Sum_probs=35.0
Q ss_pred cCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc
Q 023578 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT 183 (280)
Q Consensus 144 ~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~ 183 (280)
+.+...+++++|+++|+.++++|+++...+...++.+++.
T Consensus 22 i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 22 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 4567788999999999999999999999888888888865
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.08 E-value=7.3e-11 Score=94.53 Aligned_cols=42 Identities=12% Similarity=0.173 Sum_probs=37.8
Q ss_pred CChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 023578 197 PDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL 239 (280)
Q Consensus 197 p~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~ 239 (280)
.|..+++.+++++|++++++++|||+. ||+.|.+.+|..+++
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~-ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSG-NDIGLFETSARGVIV 203 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHTSSSEEEEC
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCC-CCHHHHhhCCcEEEe
Confidence 356788999999999999999999999 999999999976654
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.05 E-value=6.1e-09 Score=75.06 Aligned_cols=112 Identities=14% Similarity=0.170 Sum_probs=79.6
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCC
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDS 222 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs 222 (280)
++.|++.+.++.|++.|++++++|+......+.+.+.+|++ .+++. -.|+-.....+++.-. ..+.|+||+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~------~~p~~k~~~v~~~q~~-~~v~~vGDg 91 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAE------VLPHQKSEEVKKLQAK-EVVAFVGDG 91 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECS------CCHHHHHHHHHHHTTT-SCEEEEECS
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--hhccc------cchhHHHHHHHHHHcC-CEEEEEeCC
Confidence 58899999999999999999999999999999999999975 33322 1234444555555543 578899999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEE--cCHHHHHHHH
Q 023578 223 LKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRV--SSLTEVLSIL 272 (280)
Q Consensus 223 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~--~~~~dl~~~l 272 (280)
. ||..+.+.+++..++-+ +.... +..+|+++ +++..+.+.|
T Consensus 92 ~-nD~~aL~~Advgia~~~-----~~~~~---~~aADivl~~~~l~~i~~aI 134 (135)
T d2b8ea1 92 I-NDAPALAQADLGIAVGS-----GSDVA---VESGDIVLIRDDLRDVVAAI 134 (135)
T ss_dssp S-SSHHHHHHSSEEEEECC-----C-----------SEEESSCCTHHHHHHH
T ss_pred C-CcHHHHHhCCeeeecCc-----cCHHH---HHhCCEEEECCCHHHHHHHh
Confidence 9 99999999998765422 22222 34889988 4577766655
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=4.2e-10 Score=91.97 Aligned_cols=93 Identities=14% Similarity=0.179 Sum_probs=67.8
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCccc--ceeeCC-----CC----------CCCCChHHHH
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFS--PALSRE-----FR----------PYKPDPGPLL 203 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd--~v~~~~-----~~----------~~Kp~~~~~~ 203 (280)
...+.||+.++++.|+++|++++|+|+|....++.+++.+|+.++ .+++.. .+ ...-+.....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 567999999999999999999999999999999999999998733 244411 11 1111222333
Q ss_pred HHHHhcC--CCCCcEEEEcCCchhhHHHHHHcC
Q 023578 204 HICSTWE--VQPNEVMMVGDSLKDDVACGKRAG 234 (280)
Q Consensus 204 ~~~~~lg--i~~~~~v~iGDs~~~Di~~a~~~G 234 (280)
.....+. -+..+++++|||. +|+.||..+.
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~-~Dl~Ma~g~~ 244 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQ-GDLRMADGVA 244 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSS-GGGGTTTTCS
T ss_pred hhHHHHhccCCcCcEEEEeCCH-hHHHHHhCCc
Confidence 3333222 3567899999999 9999998764
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.02 E-value=1.6e-09 Score=85.06 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=48.6
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHHHh
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l~~ 274 (280)
+-.|..+++.++++ +++++|||+. ||+.|.+.+|..+.... +.. +..|++++.+..|+.++|+.
T Consensus 157 g~~Kg~al~~l~~~-----~~~i~~GDs~-ND~~Mf~~~~~~~av~~-----g~~-----~~~A~~~~~~~~ev~~~l~~ 220 (229)
T d1u02a_ 157 GVNKGSAIRSVRGE-----RPAIIAGDDA-TDEAAFEANDDALTIKV-----GEG-----ETHAKFHVADYIEMRKILKF 220 (229)
T ss_dssp TCCHHHHHHHHHTT-----SCEEEEESSH-HHHHHHHTTTTSEEEEE-----SSS-----CCCCSEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcc-----ccceeecCCC-ChHHHHhccCCeEEEEe-----CCC-----CccCeEEcCCHHHHHHHHHH
Confidence 34456777777654 6899999999 99999999987644332 111 24889999999998888876
Q ss_pred c
Q 023578 275 N 275 (280)
Q Consensus 275 ~ 275 (280)
+
T Consensus 221 l 221 (229)
T d1u02a_ 221 I 221 (229)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=1.7e-09 Score=85.67 Aligned_cols=40 Identities=13% Similarity=0.032 Sum_probs=29.3
Q ss_pred ChHHHHHHHHhcCCCCCcEEEEcC----CchhhHHHHHHcCCcEEEEc
Q 023578 198 DPGPLLHICSTWEVQPNEVMMVGD----SLKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 198 ~~~~~~~~~~~lgi~~~~~v~iGD----s~~~Di~~a~~~G~~~i~v~ 241 (280)
|..+++++ ++++++++++||| +. ||++|.+++|...++++
T Consensus 186 Kg~al~~l---~~~~~~ev~afGD~~~~g~-NDi~Ml~~~g~~~~~v~ 229 (243)
T d2amya1 186 KRYCLRHV---ENDGYKTIYFFGDKTMPGG-NDHEIFTDPRTMGYSVT 229 (243)
T ss_dssp GGGGGGGT---TTSCCSEEEEEECSCC----CCCHHHHCTTEEEEECS
T ss_pred HHHHHHHH---hCCCcceEEEEcCCCCCCC-CcHHHHHccCCcEEEeC
Confidence 33445444 3678999999999 78 99999999997666654
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=1.5e-08 Score=77.99 Aligned_cols=173 Identities=18% Similarity=0.226 Sum_probs=96.2
Q ss_pred EEEeCCCcccCCCCCHHHHHHHHhCCchHHHHHhcCCChhhHHHHhhccChhHHHHHHHHHHHHH-HhcCCCcccCcCHH
Q 023578 71 VVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFE-RQGLDRLQIMPGTA 149 (280)
Q Consensus 71 iiFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pg~~ 149 (280)
|++||||||+|....+.+.+.+.++........... .......+....++..+.... .+. ...+..++++||+.
T Consensus 6 I~iDmDGVL~Df~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~e~~~~~~~---~~~~~~ff~~L~p~~gA~ 80 (195)
T d1q92a_ 6 VLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRR--GFWVSEQYGRLRPGLSEKAIS---IWESKNFFFELEPLPGAV 80 (195)
T ss_dssp EEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCC--SSCHHHHHHHHSTTHHHHHHH---HHTSTTTTTTCCBCTTHH
T ss_pred EEEECCCccccCHHHHHHHHHHHcCCccccChhhhc--cchhHHHhCCCcHHHHHHHHH---HhhhhhHHhhCCcccCHH
Confidence 789999999987777777776654433211000000 001111111111111111111 111 12456789999999
Q ss_pred HHHHHhhhCC-CeEEEEeCCchH---H---HHHHHHHc-CCc-ccce-eeCCCCCCCCChHHHHHHHHhcCCCCCcEEEE
Q 023578 150 QLCGFLDSKK-IRRGLITRNIKE---A---VDLFHNRF-GIT-FSPA-LSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219 (280)
Q Consensus 150 ~~l~~L~~~g-~~i~ivS~~~~~---~---~~~~l~~~-g~~-fd~v-~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~i 219 (280)
++++.|++.| +.+.++|..... . -...+++. +-. .+.+ ++.+ |- .++. -++|
T Consensus 81 e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~----K~----------~~~~----d~lI 142 (195)
T d1q92a_ 81 EAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD----KT----------VVSA----DLLI 142 (195)
T ss_dssp HHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC----ST----------TSCC----SEEE
T ss_pred HHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc----cc----------eecC----eEEe
Confidence 9999999865 468888875422 1 12234443 322 3333 3322 21 1121 2799
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcCHHHHHHHH
Q 023578 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSIL 272 (280)
Q Consensus 220 GDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~~~dl~~~l 272 (280)
+|++ .+++.+.++|+.+++++.+++- . .. .....+.+.++.|+.+.|
T Consensus 143 DD~p-~n~~~~~~~g~~~il~~~~~N~--~-~~--~~~~~~Rv~~W~e~~~~i 189 (195)
T d1q92a_ 143 DDRP-DITGAEPTPSWEHVLFTACHNQ--H-LQ--LQPPRRRLHSWADDWKAI 189 (195)
T ss_dssp ESCS-CCCCSCSSCSSEEEEECCTTTT--T-CC--CCTTCEEECCTTSCHHHH
T ss_pred cCcH-HHHHHHhcCCCeEEEECCCccc--C-CC--CCCCceeeCCHHHHHHHH
Confidence 9999 9999999999999999864332 1 11 123457799999965443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=1.8e-07 Score=73.44 Aligned_cols=43 Identities=7% Similarity=-0.137 Sum_probs=33.9
Q ss_pred CCCChHHHHHHHHhcCCCCCcEEEEcCC----chhhHHHHHHcCCcEEEEc
Q 023578 195 YKPDPGPLLHICSTWEVQPNEVMMVGDS----LKDDVACGKRAGAFTCLLD 241 (280)
Q Consensus 195 ~Kp~~~~~~~~~~~lgi~~~~~v~iGDs----~~~Di~~a~~~G~~~i~v~ 241 (280)
+-.|..+++.+++ .+++++++|||+ . ||++|.+.+|...+.|.
T Consensus 183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~-ND~eml~~a~~~~~av~ 229 (244)
T d2fuea1 183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGG-NDFEIFADPRTVGHSVV 229 (244)
T ss_dssp TCSTTHHHHHHTT---SCCSEEEEEESCCSTTS-TTHHHHHSTTSEEEECS
T ss_pred hccHHHHHHHHhc---CChhhEEEEcCCCCCCC-CcHHHHHcCCCcEEEcC
Confidence 4455678877765 488999999996 6 99999999997666654
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=98.52 E-value=1.6e-07 Score=66.03 Aligned_cols=50 Identities=4% Similarity=-0.049 Sum_probs=41.1
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCc---------------hHHHHHHHHHcCCcccceeeC
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNI---------------KEAVDLFHNRFGITFSPALSR 190 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~---------------~~~~~~~l~~~g~~fd~v~~~ 190 (280)
...|.+++.+.++.|++.|+++++.|++. ...+...|+..|+.||.++.+
T Consensus 22 ~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~Yd~Li~g 86 (124)
T d1xpja_ 22 NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEILVG 86 (124)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCCSEEEEC
T ss_pred ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 45789999999999999999999999874 244667788889988877653
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.49 E-value=6.9e-07 Score=66.60 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=87.5
Q ss_pred ccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc------ccceeeCC-----------------CCCCCCCh
Q 023578 143 QIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT------FSPALSRE-----------------FRPYKPDP 199 (280)
Q Consensus 143 ~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~------fd~v~~~~-----------------~~~~Kp~~ 199 (280)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+. .+..+.++ .....-.|
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p 99 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 99 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence 68899999999999999999999999999999999999985 11111110 01222334
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccccccCCCCCCEEEcC--HHHHHHHHHh
Q 023578 200 GPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSS--LTEVLSILEA 274 (280)
Q Consensus 200 ~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~d~v~~~--~~dl~~~l~~ 274 (280)
+--..+++.++-....+.|+||+. ||..+.+.+.+.... . .+....+ ..+|+++.+ |..+.+.|++
T Consensus 100 ~~K~~lv~~l~~~g~~Va~vGDG~-nD~~AL~~AdvGIa~-~----~gt~~a~---~aAdivl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 100 SHKSKIVEYLQSYDEITAMTGDGV-NDAPALKKAEIGIAM-G----SGTAVAK---TASEMVLADDNFSTIVAAVEE 167 (168)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSG-GGHHHHHHSSEEEEE-T----TSCHHHH---HTCSEEETTCCTHHHHHHHHH
T ss_pred hHHHHHHHHHHhcccceeEEecCC-CCHHHHHhCCEEEEe-c----cccHHHH---HhCCEEEccCCHHHHHHHHHc
Confidence 444555555544456799999999 999999999986554 3 2222223 378888766 8888887764
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.20 E-value=2.1e-06 Score=60.19 Aligned_cols=46 Identities=20% Similarity=0.125 Sum_probs=37.4
Q ss_pred cccCcCHHHHHHHhhhCCCeEEEEeCCchHHH---HHHHHHcCCcccce
Q 023578 142 LQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV---DLFHNRFGITFSPA 187 (280)
Q Consensus 142 ~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~---~~~l~~~g~~fd~v 187 (280)
..|.|++.+.|+.|++.|+.|++.|++..... ...+++.|+.|+.+
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~yd~i 68 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAA 68 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCCceeh
Confidence 36899999999999999999999999876553 44566778877655
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=1.9e-06 Score=65.03 Aligned_cols=90 Identities=12% Similarity=0.055 Sum_probs=63.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCc--ccceeeCC-CCCCCCChHHHHHHHHhcCCCCCcEE
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVM 217 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~--fd~v~~~~-~~~~Kp~~~~~~~~~~~lgi~~~~~v 217 (280)
.+...||+.++|+.+.+. +.++|.|.+...+++.+++.++-. +...+..+ +...+. .+.+-++.+|-+.+.++
T Consensus 53 ~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~---~~~KdL~~l~~~l~~vv 128 (181)
T d1ta0a_ 53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRG---NYVKDLSRLGRDLRRVL 128 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETT---EEECCGGGSCSCGGGEE
T ss_pred EEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCC---cccccHhhcCCCHHHeE
Confidence 346799999999999988 999999999999999999998765 43333322 111111 12234567788889999
Q ss_pred EEcCCchhhHHHHHHcCC
Q 023578 218 MVGDSLKDDVACGKRAGA 235 (280)
Q Consensus 218 ~iGDs~~~Di~~a~~~G~ 235 (280)
.|+|++ .-...-..-|+
T Consensus 129 ivDd~~-~~~~~~~~N~I 145 (181)
T d1ta0a_ 129 ILDNSP-ASYVFHPDNAV 145 (181)
T ss_dssp EECSCG-GGGTTCGGGBC
T ss_pred EEcCCh-hhhhcCccCee
Confidence 999999 55433223344
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.85 E-value=3.2e-05 Score=65.78 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=76.7
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHH-c------CCc----ccceeeCCC-----------------
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNR-F------GIT----FSPALSREF----------------- 192 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~-~------g~~----fd~v~~~~~----------------- 192 (280)
.+...|.+..+|++||++|.++.++||+...++...++. + |-+ ||.||+...
T Consensus 183 Yv~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~ 262 (458)
T d2bdea1 183 YVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPE 262 (458)
T ss_dssp SEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTT
T ss_pred hhcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCC
Confidence 345578899999999999999999999999998876643 3 323 888875311
Q ss_pred -C-------CCCCC---hHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcC
Q 023578 193 -R-------PYKPD---PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGK-RAGAFTCLLDE 242 (280)
Q Consensus 193 -~-------~~Kp~---~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~-~~G~~~i~v~~ 242 (280)
+ ..||. ..-...+.+.+|+...+++||||+...||...+ ..||.|++|-.
T Consensus 263 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 263 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp TCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred CCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 0 00110 113467788889999999999999989988775 57999999873
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.82 E-value=0.00032 Score=53.82 Aligned_cols=124 Identities=13% Similarity=0.116 Sum_probs=79.6
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchHHHHHHHHHcCCcccceeeCCCC---CCCC--------------------
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFR---PYKP-------------------- 197 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~~~~~~l~~~g~~fd~v~~~~~~---~~Kp-------------------- 197 (280)
...+.||+.+.++.+.+. .+.+|+|.+...+++.+....|+.++ +++.+.. ..-|
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-eecccccccccCCChHHHHHHHHHhhhccCccHH
Confidence 567999999999999988 89999999999999999999998633 3322111 1111
Q ss_pred -----------------------------ChHHHHHHHHhcCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEcCCCCCC
Q 023578 198 -----------------------------DPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA-GAFTCLLDETGRYS 247 (280)
Q Consensus 198 -----------------------------~~~~~~~~~~~lgi~~~~~v~iGDs~~~Di~~a~~~-G~~~i~v~~~~~~~ 247 (280)
+..+.+..++..++++. ++||||. +|+++.+.+ |-..+.++. +|
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSI-TDve~Lr~~r~~gGlaIsF---NG 230 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSI-SDYKMFEAARGLGGVAIAF---NG 230 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSG-GGHHHHHHHHHTTCEEEEE---SC
T ss_pred HHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCcc-ccHHHHHHHhcCCCeeEEe---cC
Confidence 22344556667787664 9999999 999998877 222333332 33
Q ss_pred ccccccCCCCCCEEEcCHHHHHHHHH
Q 023578 248 ADDFTKSNLQPDFRVSSLTEVLSILE 273 (280)
Q Consensus 248 ~~~~~~~~~~~d~v~~~~~dl~~~l~ 273 (280)
+.-..+ .+....+-.+...+..+++
T Consensus 231 N~Yal~-eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 231 NEYALK-HADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CHHHHT-TCSEEEECSSTHHHHHHHH
T ss_pred cccccc-ccceEEeccchhHHHHHHH
Confidence 332222 2333344445555555554
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=89.03 E-value=0.052 Score=44.77 Aligned_cols=21 Identities=24% Similarity=0.509 Sum_probs=17.3
Q ss_pred ccEEEEeCCCcccCCCCCHHH
Q 023578 68 LRGVVFDMDGTLTVPVIDFPA 88 (280)
Q Consensus 68 ~k~iiFD~DGTL~d~~~~~~~ 88 (280)
+|.|+||+||+|++....+..
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~ 21 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDV 21 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHH
T ss_pred CceEEEeCCcEEEcceeecch
Confidence 478999999999987776653
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=83.15 E-value=0.24 Score=37.83 Aligned_cols=49 Identities=16% Similarity=0.255 Sum_probs=33.5
Q ss_pred CcccCcCHHHHHHHhhhCCCeEEEEeCCchH---HHHHHH-HHcCCc--ccceee
Q 023578 141 RLQIMPGTAQLCGFLDSKKIRRGLITRNIKE---AVDLFH-NRFGIT--FSPALS 189 (280)
Q Consensus 141 ~~~~~pg~~~~l~~L~~~g~~i~ivS~~~~~---~~~~~l-~~~g~~--fd~v~~ 189 (280)
...+.|++.++++.|+++|++++++||+... .+...+ ..+|+. .+.+++
T Consensus 16 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~ 70 (253)
T d1wvia_ 16 GKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYT 70 (253)
T ss_dssp TTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEE
T ss_pred CCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccccccccc
Confidence 3456899999999999999999999995433 233333 334554 344443
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=83.14 E-value=0.98 Score=32.74 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=53.5
Q ss_pred CHHHHHHHhhhCCCeEEEEeCC-chHHHHHHHHHcCCcccce-eeCCCCCCCCChHHHHHHHHhcCCCCCcEEEEcCCch
Q 023578 147 GTAQLCGFLDSKKIRRGLITRN-IKEAVDLFHNRFGITFSPA-LSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLK 224 (280)
Q Consensus 147 g~~~~l~~L~~~g~~i~ivS~~-~~~~~~~~l~~~g~~fd~v-~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~v~iGDs~~ 224 (280)
++...|..+++.+-++++++-. .....+.+.+.+|+++... +..+. +.+....-+++-|++ ++|||..
T Consensus 82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~~~~~~~~~-----e~~~~v~~l~~~G~~----vVVG~~~- 151 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEE-----DARGQINELKANGTE----AVVGAGL- 151 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHH-----HHHHHHHHHHHTTCC----EEEESHH-
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCceEEEEecCHH-----HHHHHHHHHHHCCCC----EEECChH-
Confidence 3455556666678899999853 4455677778888873322 11110 112233344455665 6799988
Q ss_pred hhHHHHHHcCCcEEEEc
Q 023578 225 DDVACGKRAGAFTCLLD 241 (280)
Q Consensus 225 ~Di~~a~~~G~~~i~v~ 241 (280)
-...|++.|+..+++.
T Consensus 152 -~~~~A~~~Gl~~vli~ 167 (186)
T d2pjua1 152 -ITDLAEEAGMTGIFIY 167 (186)
T ss_dssp -HHHHHHHTTSEEEESS
T ss_pred -HHHHHHHcCCCEEEEe
Confidence 4688999999999875
|