Citrus Sinensis ID: 023829

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV
Secondary Structure (PSIPRED)
cccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccccccccccccccccccccEEEEcccccccccccEEEEEccccccccccccEEEcccccccccccHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHcccccccccccccEEEEcccccEEcccccccEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccEEEEEEEcccEEcccccHHHcHHHHccccccEEEEEccccEEEEccccccEEEEccccccccHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALghhpllsssasasthafkplqvvelpetdssatvdigavrdsgddvvsEERLQKLTVVLDLDETLVCAYetsslpvtlrnqatgagLKWFEMEClssdkecegkpkinhvtvferPGLREFLKQLSEFADLILFTAGlegyarplvdridgenlfslrlyrpsttsteyrehvkdLSCLSKDLCRTlivdnnpfsfllqplngipcipfsagqphdnqvlTNVTLLKFLLSSLNHV
Flexible Loop (DISEMBL)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVelpetdssatvdigavrdsgddvvseerLQKLtvvldldeTLVCAyetsslpvtlrNQATGAGLKWFEMECLSSdkecegkpkiNHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRlyrpsttsteyrehvKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV
Low Complexity Region (SEG)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPllsssasasTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKltvvldldetlvCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV
Disordered region (IsUnstruct)
********VAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLL*****************************I*********VVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLY**************DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLS*****
Disordered Region (DISOPRED)
*********AYSHRSIQVWRTLLNWLAFFFQIFAKILRA****************************************************LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLN**
Disordered Region (DISEMBL)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV
Disordered Region (DISPRO)
***LTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLL****************************D**A*RDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLS*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
O14595	271	Carboxy-terminal domain R	yes	no	0.503	0.512	0.377	2e-16
Q07949	397	Probable phosphatase PSR2	yes	no	0.565	0.392	0.312	2e-16
P58466	261	Carboxy-terminal domain R	yes	no	0.478	0.505	0.388	2e-15
Q9GZU7	261	Carboxy-terminal domain R	no	no	0.478	0.505	0.388	2e-15
Q8BX07	270	Carboxy-terminal domain R	no	no	0.503	0.514	0.358	2e-15
Q9XYL0	306	Probable C-terminal domai	no	no	0.471	0.424	0.38	5e-15
Q9PTJ6	275	CTD small phosphatase-lik	no	no	0.478	0.48	0.355	5e-15
Q09695	325	Uncharacterized protein C	yes	no	0.5	0.424	0.318	7e-15
P58465	276	CTD small phosphatase-lik	no	no	0.478	0.478	0.348	1e-14
O15194	276	CTD small phosphatase-lik	no	no	0.478	0.478	0.348	1e-14

>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 20/159 (12%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           V+EE   ++ VV+DLDETLV    +S  P+   N A                 E EG   
Sbjct: 94  VTEEDQGRICVVIDLDETLV---HSSFKPI---NNAD-----------FIVPIEIEGT-- 134

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
            + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL+R S   
Sbjct: 135 THQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVF 194

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
            +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct: 195 HQ-GCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells. May contribute to the development of sarcomas.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSR2 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 33/189 (17%)

Query: 89  EERLQKLTVVLDLDETLVCA---YETSS---LPVTLRNQATGAGLKWFEMECLSSDKECE 142
           +E  QK  ++LDLDETLV +   Y  S+   LPV + +Q                     
Sbjct: 222 QEFQQKKCLILDLDETLVHSSFKYMHSADFVLPVEIDDQ--------------------- 260

Query: 143 GKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP 202
               +++V V +RPG+ EFL ++S+  ++++FTA +  YA PL+D +D       RL+R 
Sbjct: 261 ----VHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTIHHRLFRE 316

Query: 203 STTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTN 262
           +  + E   ++K+LS + + L  T+I+DN+P S++  P + +P   + +   HDN++L  
Sbjct: 317 ACYNYE-GNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPISSWFSDT-HDNELLDI 374

Query: 263 VTLLKFLLS 271
           + LL+ L S
Sbjct: 375 IPLLEDLSS 383

Probable phosphatase. Involved in the response to sodium and lithium ion stress (but not to potassium or sorbitol stress) by inducing transcription of the sodium pump ENA1/PMR2. Acts through a calcineurin-independent pathway and is functionally redundant with PSR1. Also involved in the general stress response; acts together with WHI2 to activate stress response element (STRE)-mediated gene expression, possibly through dephosphorylation of MSN2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K+ VV+DLDETLV    +S  PV   N A       F +       E +G   ++ V V 
Sbjct: 90  KICVVIDLDETLV---HSSFKPV---NNAD------FIIPV-----EIDGV--VHQVYVL 130

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S        +V
Sbjct: 131 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-FHRGNYV 189

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 190 KDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 221

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation (By similarity). Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K+ VV+DLDETLV    +S  PV   N A       F +       E +G   ++ V V 
Sbjct: 90  KICVVIDLDETLV---HSSFKPV---NNAD------FIIPV-----EIDGV--VHQVYVL 130

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S        +V
Sbjct: 131 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-FHRGNYV 189

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 190 KDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 221

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 20/159 (12%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           V+E+   ++ VV+DLDETLV    +S  P+   N A                 E EG   
Sbjct: 93  VTEQDQGRICVVIDLDETLV---HSSFKPI---NNAD-----------FIVPVEIEGT-- 133

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
            + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL+R +   
Sbjct: 134 THQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVF 193

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
            +   +VKDLS L +DL +T+I+DN+P S++  P N +P
Sbjct: 194 HQ-GCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVP 231

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum GN=fcpA PE=3 SV=1

 Score = 82.0 bits (201), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 83/150 (55%), Gaps = 20/150 (13%)

Query: 96  TVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER 155
           T+VLDLDETLV    +S  PV   +                   E EG   I+ V V +R
Sbjct: 138 TLVLDLDETLV---HSSFKPVHNPDFIVPV--------------EIEGT--IHQVYVVKR 178

Query: 156 PGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKD 215
           P + +FL+ ++E  ++++FTA L  YA P++D +D   +   RL+R S  + +   +VKD
Sbjct: 179 PFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGRVIHYRLFRESCHNHK-GNYVKD 237

Query: 216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           LS L +DL  T+IVDN+P S+L  P N IP
Sbjct: 238 LSRLGRDLKSTIIVDNSPSSYLFHPENAIP 267

May function as a phosphatase involved in the regulation of cell growth and differentiation.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2

 Score = 81.6 bits (200), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K  VV+DLDETLV    +S  P++  +                   E +G   I+ V V 
Sbjct: 105 KKCVVIDLDETLV---HSSFKPISNADFIVPV--------------EIDGT--IHQVYVL 145

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL+R S        +V
Sbjct: 146 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYV 204

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L ++L + +IVDN+P S++  P N +P
Sbjct: 205 KDLSRLGRELSKVIIVDNSPASYIFHPENAVP 236

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1

 Score = 81.3 bits (199), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 22/160 (13%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           +++E   K  ++LDLDETLV                  +  K+ E        E +G   
Sbjct: 150 IAKEDEGKKCLILDLDETLV-----------------HSSFKYIEPADFVVSIEIDG--- 189

Query: 147 INH-VTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
           + H V V +RPG+ EFLK++ +  ++++FTA L  YA P++D +D  ++   RL+R +  
Sbjct: 190 LQHDVRVVKRPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSHVIRHRLFREACC 249

Query: 206 STEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           + E    VKDLS L ++L  ++I+DN+P S++  P + +P
Sbjct: 250 NYE-GNFVKDLSQLGRNLEDSIIIDNSPSSYIFHPSHAVP 288

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2 SV=3

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K  VV+DLDETLV    +S  P++  +                   E +G   I+ V V 
Sbjct: 106 KKCVVIDLDETLV---HSSFKPISNADFIVPV--------------EIDGT--IHQVYVL 146

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S        +V
Sbjct: 147 KRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYV 205

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L ++L + +IVDN+P S++  P N +P
Sbjct: 206 KDLSRLGRELSKVIIVDNSPASYIFHPENAVP 237

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1 SV=2

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K  VV+DLDETLV    +S  P++  +                   E +G   I+ V V 
Sbjct: 106 KKCVVIDLDETLV---HSSFKPISNADFIVPV--------------EIDGT--IHQVYVL 146

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S        +V
Sbjct: 147 KRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYV 205

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L ++L + +IVDN+P S++  P N +P
Sbjct: 206 KDLSRLGRELSKVIIVDNSPASYIFHPENAVP 237

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation (By similarity). Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
224109316	261	predicted protein [Populus trichocarpa]	0.902	0.954	0.763	1e-109
224101149	307	predicted protein [Populus trichocarpa]	0.942	0.846	0.736	1e-106
297820342	304	NLI interacting factor family protein [A	0.942	0.855	0.717	1e-106
225448441	318	PREDICTED: CTD small phosphatase-like pr	0.974	0.845	0.698	1e-105
15228783	305	haloacid dehalogenase-like hydrolase dom	0.938	0.849	0.719	1e-104
225448443	298	PREDICTED: CTD small phosphatase-like pr	0.909	0.842	0.689	1e-101
357492701	305	CTD small phosphatase-like protein [Medi	0.985	0.891	0.671	3e-98
363808300	304	uncharacterized protein LOC100783451 [Gl	0.981	0.891	0.692	1e-94
449463020	297	PREDICTED: CTD small phosphatase-like pr	0.981	0.912	0.679	1e-94
388492828	292	unknown [Lotus japonicus]	0.920	0.869	0.666	3e-90

>gi|224109316|ref|XP_002315157.1| predicted protein [Populus trichocarpa] gi|222864197|gb|EEF01328.1| predicted protein [Populus trichocarpa]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/262 (76%), Positives = 220/262 (83%), Gaps = 13/262 (4%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQ EV YS RSIQ+WRTL +WLAFFF IF +ILRA+G   L      +S+H FKPL
Sbjct: 1   MAELTQPEVVYSPRSIQLWRTLWDWLAFFFHIFLQILRAVGPQTL------SSSHPFKPL 54

Query: 61  QVVELPETDSS--ATVDIGAVRDSGDDVVS-EERLQKLTVVLDLDETLVCAYETSSLPVT 117
            +VELP+T     ATV+I A    G D VS  E +QKL VVLDLDETLVCAYETSSLP  
Sbjct: 55  PLVELPDTTDPPPATVEISA----GTDAVSANEPIQKLKVVLDLDETLVCAYETSSLPAA 110

Query: 118 LRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAG 177
           LRNQAT AGLKWFE++C+SSDKECEGKPKIN+VTVFERPGL EFLKQLSEFA+L+LFTAG
Sbjct: 111 LRNQATEAGLKWFELDCISSDKECEGKPKINYVTVFERPGLDEFLKQLSEFAELVLFTAG 170

Query: 178 LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFL 237
           LEGYARPLVDRID EN FSLRLYRPST+STEYREHVKDLSC+SKD CR +IVDNNPFSFL
Sbjct: 171 LEGYARPLVDRIDTENRFSLRLYRPSTSSTEYREHVKDLSCISKDPCRIVIVDNNPFSFL 230

Query: 238 LQPLNGIPCIPFSAGQPHDNQV 259
           LQPLNGIPC+PFSAGQPHD QV
Sbjct: 231 LQPLNGIPCVPFSAGQPHDTQV 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101149|ref|XP_002312160.1| predicted protein [Populus trichocarpa] gi|222851980|gb|EEE89527.1| predicted protein [Populus trichocarpa]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/273 (73%), Positives = 221/273 (80%), Gaps = 13/273 (4%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELT  EV YS RSIQ+WR L NWLAFFFQIF +ILRA+G       S S  +H FKPL
Sbjct: 1   MAELTHPEVVYSPRSIQLWRALWNWLAFFFQIFLQILRAVGPR-----SLSTPSHTFKPL 55

Query: 61  QVVELPET--DSSATVDIGAVRDSGDDVVS-EERLQKLTVVLDLDETLVCAYETSSLPVT 117
            + ELPET     ATV+I A    G D +S  E +QKLTVVLDLDETLVCAYETSSLP  
Sbjct: 56  PLGELPETTDPPPATVEIPA----GTDAISANEPIQKLTVVLDLDETLVCAYETSSLPAL 111

Query: 118 LRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAG 177
           L NQA  AGLKWFE+EC+SSDKECEGK KIN+VTVFERPGL EFLKQLSEFA+L+LFTAG
Sbjct: 112 LCNQAMEAGLKWFELECVSSDKECEGKLKINYVTVFERPGLDEFLKQLSEFAELVLFTAG 171

Query: 178 LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFL 237
           LEGYARPLVDRID EN FSLRLYRPSTTSTEY+EHVKDLSC+S D CR +IVDNNPFSFL
Sbjct: 172 LEGYARPLVDRIDTENRFSLRLYRPSTTSTEYQEHVKDLSCISNDPCRIVIVDNNPFSFL 231

Query: 238 LQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLL 270
           LQPLNGIPC+PFSAGQPHD QV  +  LLKF++
Sbjct: 232 LQPLNGIPCVPFSAGQPHDTQVGIS-KLLKFII 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820342|ref|XP_002878054.1| NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297323892|gb|EFH54313.1| NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/262 (71%), Positives = 215/262 (82%), Gaps = 2/262 (0%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQA+V YS RS QVW+TL+NWLAFF+QIF +ILRA+G+HPLLSSSA AS   FKPL
Sbjct: 1   MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPL 60

Query: 61  QVVELPE--TDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTL 118
             +EL +  ++S  TVDI +   S        R  +L VVLDLDETLVCAYETSSLP  L
Sbjct: 61  PAIELLDRASESPTTVDIASTTTSDSSDCERSRFHRLKVVLDLDETLVCAYETSSLPAAL 120

Query: 119 RNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGL 178
           RNQA  AGLKWFE+ECLS+DKEC+GKPKIN+VTVFERPGL EFL+QLSEFADL+LFTAGL
Sbjct: 121 RNQAIEAGLKWFELECLSTDKECDGKPKINYVTVFERPGLHEFLEQLSEFADLVLFTAGL 180

Query: 179 EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL 238
           EGYARPLVDRID   + S RLYRPST ST+YR+HVKDL   SK++CRT+IVDNNPFSFLL
Sbjct: 181 EGYARPLVDRIDTRKVLSNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSFLL 240

Query: 239 QPLNGIPCIPFSAGQPHDNQVL 260
           QP NGIPCI FSAGQP+D Q+L
Sbjct: 241 QPSNGIPCIAFSAGQPNDTQLL 262

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448441|ref|XP_002273682.1| PREDICTED: CTD small phosphatase-like protein 2 isoform 1 [Vitis vinifera] gi|297736603|emb|CBI25474.3| unnamed protein product [Vitis vinifera]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/289 (69%), Positives = 227/289 (78%), Gaps = 20/289 (6%)

Query: 2   AELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRA------------LGHHPLLSSS 49
           AELTQAEV Y+ RS+Q+WRTLLNWLAFFFQIF +ILR             L HH LL SS
Sbjct: 10  AELTQAEV-YAPRSLQLWRTLLNWLAFFFQIFLQILRGTPSVTQVLSYVGLRHHSLLPSS 68

Query: 50  ASASTHAFKPLQVVELPETDSSA-TVDIGAVRDSGDDVVSEER-LQKLTVVLDLDETLVC 107
            S     FKPL VVELPE +    +V I A   +     + +R  +K TVVLDLDETLVC
Sbjct: 69  PS-----FKPLPVVELPELEPPPDSVQINATDGTDSAAAAVDRPAEKFTVVLDLDETLVC 123

Query: 108 AYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSE 167
           AYETSSLP ++RNQA  +GLKWFE+EC+SSDKECEGKPK+N+VTVFERPGLREFLKQLSE
Sbjct: 124 AYETSSLPASIRNQAIESGLKWFELECVSSDKECEGKPKVNYVTVFERPGLREFLKQLSE 183

Query: 168 FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227
           F++L+LFTAGLEGYARPLVDRID ENLFSLRLYRPST STEYREHVKDLSCLSKDLCR +
Sbjct: 184 FSELVLFTAGLEGYARPLVDRIDVENLFSLRLYRPSTISTEYREHVKDLSCLSKDLCRIV 243

Query: 228 IVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV 276
           IVDNNPFSFLLQPLNG+PCIPFSAGQP+D Q+L  +  L   LS  N V
Sbjct: 244 IVDNNPFSFLLQPLNGVPCIPFSAGQPNDGQLLEVLLPLLKHLSQQNDV 292

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228783|ref|NP_191155.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|7573491|emb|CAB87850.1| putative protein [Arabidopsis thaliana] gi|20466680|gb|AAM20657.1| putative protein [Arabidopsis thaliana] gi|21537285|gb|AAM61626.1| unknown [Arabidopsis thaliana] gi|23198192|gb|AAN15623.1| putative protein [Arabidopsis thaliana] gi|332645940|gb|AEE79461.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/264 (71%), Positives = 218/264 (82%), Gaps = 5/264 (1%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQA+V YS RS QVW+TL+NWLAFF+QIF +ILRA+G+HPLLSSSA AS   FKPL
Sbjct: 1   MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPL 60

Query: 61  QVVELPE--TDSSATVDIGAV--RDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPV 116
             +EL +  ++S  TV+I A    DS  D  +  R Q+L VVLDLDETLVCAYETSSLP 
Sbjct: 61  PAIELLDRASESPTTVEIAATTTSDSCSDG-ARSRFQRLKVVLDLDETLVCAYETSSLPA 119

Query: 117 TLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTA 176
            LRNQA  AGLKWFE+ECLS+DKE +GKPKIN+VTVFERPGL EFL+QLSEFADLILFTA
Sbjct: 120 ALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLEQLSEFADLILFTA 179

Query: 177 GLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF 236
           GLEGYARPLVDRID   + + RLYRPST ST+YR+HVKDL   SK++CRT+IVDNNPFSF
Sbjct: 180 GLEGYARPLVDRIDTRKVLTNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSF 239

Query: 237 LLQPLNGIPCIPFSAGQPHDNQVL 260
           LLQP NGIPCI FSAGQP+D Q+L
Sbjct: 240 LLQPSNGIPCIAFSAGQPNDTQLL 263

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448443|ref|XP_002274356.1| PREDICTED: CTD small phosphatase-like protein 2 isoform 2 [Vitis vinifera]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/287 (68%), Positives = 220/287 (76%), Gaps = 36/287 (12%)

Query: 2   AELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRA------------LGHHPLLSSS 49
           AELTQAEV Y+ RS+Q+WRTLLNWLAFFFQIF +ILR             L HH LL SS
Sbjct: 10  AELTQAEV-YAPRSLQLWRTLLNWLAFFFQIFLQILRGTPSVTQVLSYVGLRHHSLLPSS 68

Query: 50  ASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAY 109
            S     FKPL VVELPE +              D V       ++ VVLDLDETLVCAY
Sbjct: 69  PS-----FKPLPVVELPELEPPP-----------DSV-------QINVVLDLDETLVCAY 105

Query: 110 ETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA 169
           ETSSLP ++RNQA  +GLKWFE+EC+SSDKECEGKPK+N+VTVFERPGLREFLKQLSEF+
Sbjct: 106 ETSSLPASIRNQAIESGLKWFELECVSSDKECEGKPKVNYVTVFERPGLREFLKQLSEFS 165

Query: 170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV 229
           +L+LFTAGLEGYARPLVDRID ENLFSLRLYRPST STEYREHVKDLSCLSKDLCR +IV
Sbjct: 166 ELVLFTAGLEGYARPLVDRIDVENLFSLRLYRPSTISTEYREHVKDLSCLSKDLCRIVIV 225

Query: 230 DNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV 276
           DNNPFSFLLQPLNG+PCIPFSAGQP+D Q+L  +  L   LS  N V
Sbjct: 226 DNNPFSFLLQPLNGVPCIPFSAGQPNDGQLLEVLLPLLKHLSQQNDV 272

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492701|ref|XP_003616639.1| CTD small phosphatase-like protein [Medicago truncatula] gi|355517974|gb|AES99597.1| CTD small phosphatase-like protein [Medicago truncatula]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 190/283 (67%), Positives = 226/283 (79%), Gaps = 11/283 (3%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHA---- 56
           M ELTQ EV    R+ QVW++LL+W AFFFQIF++I+R LGH+PLLSSS+S+S+ +    
Sbjct: 1   MGELTQTEVYSPPRTQQVWKSLLSWFAFFFQIFSQIIRTLGHYPLLSSSSSSSSSSSSTS 60

Query: 57  --FKPLQVVELPETDSSATVDIGAVRDSGDDVVSEER-LQKLTVVLDLDETLVCAYETSS 113
             FKPL  VEL + DSS++    A+  + D   +++R  QKLTVVLDLDETLVCAYETSS
Sbjct: 61  SSFKPLPSVELQDFDSSSS----ALEITADYPAADQRPFQKLTVVLDLDETLVCAYETSS 116

Query: 114 LPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173
           LP  LR+QA  AGL WF+MEC+SSDKE EG+PKIN+VTVFERPGL+EFL +LSEFADL+L
Sbjct: 117 LPAALRSQAIEAGLNWFDMECVSSDKEGEGRPKINYVTVFERPGLKEFLTKLSEFADLVL 176

Query: 174 FTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNP 233
           FTAGLEGYARPLVD ID EN FSLRLYRPST STE+REHVKDL+C+SKDL R +IVDNNP
Sbjct: 177 FTAGLEGYARPLVDIIDKENRFSLRLYRPSTISTEHREHVKDLTCISKDLDRIVIVDNNP 236

Query: 234 FSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV 276
           FSF+LQP+NGIPCIPFSAG PHD Q+L  +  L   LS  N V
Sbjct: 237 FSFVLQPVNGIPCIPFSAGHPHDTQLLDVILPLLKQLSEQNDV 279

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808300|ref|NP_001242244.1| uncharacterized protein LOC100783451 [Glycine max] gi|255641128|gb|ACU20842.1| unknown [Glycine max]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/283 (69%), Positives = 221/283 (78%), Gaps = 12/283 (4%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHA---- 56
           M ELTQAEV YS R+ QVWR LL+WLAFFFQIF +I+RALGH+PLLS S+S+   +    
Sbjct: 1   MGELTQAEV-YSPRTQQVWRALLSWLAFFFQIFFQIIRALGHYPLLSFSSSSDAASSSNA 59

Query: 57  -FKPLQVVELPETDS--SATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSS 113
            FKPL  VEL E DS  S+ + I  +  S  D      + KLTVVLDLDETLVCAYETSS
Sbjct: 60  SFKPLPSVELSEHDSPPSSALQISPLHCSPKD----HPIPKLTVVLDLDETLVCAYETSS 115

Query: 114 LPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173
           LP  LR QA   GL WFE+EC+S DKE EGKPKIN+VTVFERPGL+EFLKQLSEFAD+ L
Sbjct: 116 LPAALRTQAIEGGLNWFELECVSIDKEGEGKPKINYVTVFERPGLKEFLKQLSEFADMAL 175

Query: 174 FTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNP 233
           FTAGLEGYARPLVDRID EN F LRLYRPST STEYREHVKDL+C+SKDLCR +IVDNNP
Sbjct: 176 FTAGLEGYARPLVDRIDVENRFCLRLYRPSTISTEYREHVKDLTCISKDLCRIVIVDNNP 235

Query: 234 FSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV 276
           FSF+LQP+NGIPCIPFSAGQPHD Q+L  +  L   LS  N +
Sbjct: 236 FSFVLQPVNGIPCIPFSAGQPHDTQLLDVILPLLKQLSERNDI 278

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463020|ref|XP_004149232.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus] gi|449530283|ref|XP_004172125.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 189/278 (67%), Positives = 220/278 (79%), Gaps = 7/278 (2%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQ EV YS  ++ VW+TLLNWLAFFFQIF  IL A GH  LLSS +S+S      L
Sbjct: 1   MAELTQPEV-YSPGTLHVWKTLLNWLAFFFQIFVSILTAFGHLRLLSSHSSSSPSFKP-L 58

Query: 61  QVVELPETD--SSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTL 118
            VVELP+ +  +++ VDI +V D  +   S+  ++KLT+VLDLDETL+CAYETS+LP  +
Sbjct: 59  PVVELPDHELLAASAVDIASVEDEEE---SDGLMEKLTIVLDLDETLICAYETSTLPAII 115

Query: 119 RNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGL 178
           R+QA  AGLK FE+EC SSDK+CEGKPK+N+VTVFERPGL +FLK L  FADL+LFTAGL
Sbjct: 116 RSQAIEAGLKSFELECFSSDKDCEGKPKVNYVTVFERPGLHDFLKHLGGFADLVLFTAGL 175

Query: 179 EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL 238
           EGYARPLVDRID EN FSLRLYRPST STEYR+HVKDLSCLSKDL R +IVDNNPFSFLL
Sbjct: 176 EGYARPLVDRIDEENRFSLRLYRPSTISTEYRDHVKDLSCLSKDLRRVVIVDNNPFSFLL 235

Query: 239 QPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLSSLNHV 276
           QP NGIPCIPFSAGQPHD+Q+L  +  L   LS  N V
Sbjct: 236 QPQNGIPCIPFSAGQPHDSQLLDVILPLLEHLSQQNDV 273

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492828|gb|AFK34480.1| unknown [Lotus japonicus]

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 180/270 (66%), Positives = 209/270 (77%), Gaps = 16/270 (5%)

Query: 4   LTQAEVAYS-HRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQV 62
           LTQ +V YS  R+ Q WR LL+W  FFFQIF +I+    H+PLLS S+S+ + +F+P+  
Sbjct: 6   LTQCDVVYSVPRTQQAWRALLSWFGFFFQIFYQIIGVFAHYPLLSFSSSSDSSSFEPVPA 65

Query: 63  VE--LPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRN 120
           V+  LP   SS+         +GDD      LQKLTVVLDL+ETLVCAYETSS+P TLR 
Sbjct: 66  VDQDLPPLRSSSA--------AGDD----GPLQKLTVVLDLNETLVCAYETSSVPATLRT 113

Query: 121 QATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEG 180
           QA  AGL WFEMECL SDK+ EG  K ++VTVFERPGL+EFLKQLSEFADL+LFTAGLEG
Sbjct: 114 QAIQAGLNWFEMECLCSDKDAEGITKTSYVTVFERPGLKEFLKQLSEFADLVLFTAGLEG 173

Query: 181 YARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQP 240
           YARPLVDRID +NLFSLRLYRPST STE+REHVKDL+C+SKDLCR +IVDNNPFSFLLQP
Sbjct: 174 YARPLVDRIDSDNLFSLRLYRPSTISTEHREHVKDLTCISKDLCRIVIVDNNPFSFLLQP 233

Query: 241 LNGIPCIPFSAGQPHDNQVLTNV-TLLKFL 269
            NGIPCI FSAGQP D Q+L  +  LLK L
Sbjct: 234 DNGIPCISFSAGQPCDTQLLDVILPLLKHL 263

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2082048	305	AT3G55960 [Arabidopsis thalian	0.971	0.878	0.638	7.7e-87
TAIR|locus:2019352	221	AT1G29780 [Arabidopsis thalian	0.434	0.542	0.430	1.1e-18
TAIR|locus:2019332	278	AT1G29770 [Arabidopsis thalian	0.351	0.348	0.474	3.6e-18
UNIPROTKB|G4N711	505	MGG_03646 "Serine/threonine-pr	0.467	0.255	0.345	7.8e-17
SGD|S000004009	397	PSR2 "Functionally redundant P	0.449	0.312	0.333	2.3e-16
TAIR|locus:2171978	272	AT5G45700 [Arabidopsis thalian	0.355	0.360	0.44	4.7e-16
DICTYBASE|DDB_G0286145	375	DDB_G0286145 "dullard-like pho	0.434	0.32	0.352	8.8e-16
DICTYBASE|DDB_G0286143	344	DDB_G0286143 "dullard-like pho	0.434	0.348	0.352	1.3e-15
FB|FBgn0036556	329	CG5830 [Drosophila melanogaste	0.351	0.294	0.41	1.8e-15
UNIPROTKB|Q2KJ43	271	CTDSP2 "Uncharacterized protei	0.373	0.380	0.415	2.6e-15

TAIR|locus:2082048 AT3G55960 [Arabidopsis thaliana (taxid:3702)]

 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 175/274 (63%), Positives = 204/274 (74%)

Query:     1 MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPXXXXXXXXXTHAFKPL 60
             MAELTQA+V YS RS QVW+TL+NWLAFF+QIF +ILRA+G+HP            FKPL
Sbjct:     1 MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPL 60

Query:    61 QVVELPE--TDSSATVDIGAVR--DSGDDVVSEERLQKXXXXXXXXXXXXCAYETSSLPV 116
               +EL +  ++S  TV+I A    DS  D  +  R Q+            CAYETSSLP 
Sbjct:    61 PAIELLDRASESPTTVEIAATTTSDSCSDG-ARSRFQRLKVVLDLDETLVCAYETSSLPA 119

Query:   117 TLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTA 176
              LRNQA  AGLKWFE+ECLS+DKE +GKPKIN+VTVFERPGL EFL+QLSEFADLILFTA
Sbjct:   120 ALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLEQLSEFADLILFTA 179

Query:   177 GLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF 236
             GLEGYARPLVDRID   + + RLYRPST ST+YR+HVKDL   SK++CRT+IVDNNPFSF
Sbjct:   180 GLEGYARPLVDRIDTRKVLTNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSF 239

Query:   237 LLQPLNGIPCIPFSAGQPHDNQVLTNVT-LLKFL 269
             LLQP NGIPCI FSAGQP+D Q+L  +  LLK L
Sbjct:   240 LLQPSNGIPCIAFSAGQPNDTQLLDVILPLLKQL 273

GO:0005634 "nucleus" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2019352 AT1G29780 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 53/123 (43%), Positives = 76/123 (61%)

Query:   146 KINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
             +I  + V +RPG+ EFL++L E   +++FTAGLE YA  ++D++D   + S RLYR S T
Sbjct:    83 EIMPIFVVKRPGVTEFLERLGENYKVVVFTAGLEEYASQVLDKLDKNGVISQRLYRDSCT 142

Query:   206 STEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVT 264
                 + +VKDLS +  KDL   LIVD+NP S+ LQP NG+P   F      D ++L  V 
Sbjct:   143 EVNGK-YVKDLSLVVGKDLRSALIVDDNPSSYSLQPENGVPIKAF-VDDLKDQELLNLVE 200

Query:   265 LLK 267
              L+
Sbjct:   201 FLE 203

GO:0005886 "plasma membrane" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

TAIR|locus:2019332 AT1G29770 [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 47/99 (47%), Positives = 67/99 (67%)

Query:   152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYRE 211
             V +RPG+ EFL+++S+   + +FTAGL  YA  ++D++D   + S RLYR S T    R 
Sbjct:   143 VVKRPGVTEFLERISKNYRVAIFTAGLPEYASQVLDKLDKNRVISQRLYRDSCTEVNGR- 201

Query:   212 HVKDLSCLSK-DLCRTLIVDNNPFSFLLQPLNGIPCIPF 249
             + KDLS ++K DL   L+VD+NPFS+ LQP NG+P  PF
Sbjct:   202 YAKDLSLVAKNDLGSVLLVDDNPFSYSLQPDNGVPIKPF 240

GO:0005634 "nucleus" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|G4N711 MGG_03646 "Serine/threonine-protein phosphatase dullard" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 215 (80.7 bits), Expect = 7.8e-17, P = 7.8e-17
 Identities = 46/133 (34%), Positives = 83/133 (62%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    ++V V +RPG+ +F+K++ E  ++++FTA +  Y  PL+D++D  N+   RL
Sbjct:   364 EIEGN--YHNVYVIKRPGVDQFMKRVGELYEVVVFTASVSKYGDPLLDQLDIHNVVHHRL 421

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQV 259
             +R S  + +   +VKDLS + +DL  T+I+DN+P S++  P + +P   + +   HDN++
Sbjct:   422 FRESCYNHQ-GNYVKDLSQVGRDLKDTIIIDNSPTSYIFHPQHAVPISSWFS-DAHDNEL 479

Query:   260 LTNVTLLKFLLSS 272
             L  + +L+ L  S
Sbjct:   480 LDLIPVLEDLAGS 492

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

SGD|S000004009 PSR2 "Functionally redundant Psr1p homolog" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 208 (78.3 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 42/126 (33%), Positives = 79/126 (62%)

Query:   146 KINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
             ++++V V +RPG+ EFL ++S+  ++++FTA +  YA PL+D +D       RL+R +  
Sbjct:   260 QVHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTIHHRLFREACY 319

Query:   206 STEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTL 265
             + E   ++K+LS + + L  T+I+DN+P S++  P + +P   + +   HDN++L  + L
Sbjct:   320 NYE-GNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPISSWFS-DTHDNELLDIIPL 377

Query:   266 LKFLLS 271
             L+ L S
Sbjct:   378 LEDLSS 383

GO:0005886 "plasma membrane" evidence=IEA;ISS

GO:0016311 "dephosphorylation" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0006950 "response to stress" evidence=IGI

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2171978 AT5G45700 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:   152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYR 210
             V +RPG+ EFLK++ E   +++FTAGL  YA  ++D++D E  + S   YR + +  + R
Sbjct:   137 VIKRPGVDEFLKKIGEKYQIVVFTAGLREYASLVLDKLDPERRVISRSFYRDACSEIDGR 196

Query:   211 EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250
               VKDL  + +DL R +IVD+NP S+ LQP N  P  PFS
Sbjct:   197 L-VKDLGFVMRDLRRVVIVDDNPNSYALQPENAFPIKPFS 235

GO:0005739 "mitochondrion" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

GO:0001708 "cell fate specification" evidence=RCA

DICTYBASE|DDB_G0286145 DDB_G0286145 "dullard-like phosphatase domain containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 202 (76.2 bits), Expect = 8.8e-16, P = 8.8e-16
 Identities = 44/125 (35%), Positives = 75/125 (60%)

Query:   152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYRE 211
             V +RP +  FL+++S++ D+++FTA ++ YA PL+D++D   +F  RL+R S    ++  
Sbjct:   240 VIKRPHVDYFLEKVSQWYDIVIFTASMQQYADPLLDQLDTHKVFKKRLFRDSCLE-KHGN 298

Query:   212 HVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLS 271
              VKDLS + +DL  T+I+DN+P ++     N +P   +    P D  +L+   LL FL  
Sbjct:   299 FVKDLSMIDQDLTSTIIIDNSPIAYSNNLENALPIDNWMGDNPSDTSLLS---LLPFL-E 354

Query:   272 SLNHV 276
              + HV
Sbjct:   355 MIRHV 359

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

DICTYBASE|DDB_G0286143 DDB_G0286143 "dullard-like phosphatase domain containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 199 (75.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 44/125 (35%), Positives = 74/125 (59%)

Query:   152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYRE 211
             V +RP +  FL+++S++ D+++FTA ++ YA PL+D++D   +F  RL+R S    +   
Sbjct:   210 VIKRPHVDYFLEKVSQWYDIVIFTASMQQYADPLLDQLDTHKVFKKRLFRDSCLEKD-GN 268

Query:   212 HVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLS 271
              VKDLS + +DL  T+I+DN+P ++     N +P   +    P D  +L+   LL FL  
Sbjct:   269 FVKDLSMIDQDLTSTIIIDNSPIAYSNNLENALPIDNWMGDNPSDTSLLS---LLPFL-E 324

Query:   272 SLNHV 276
              + HV
Sbjct:   325 IIRHV 329

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

FB|FBgn0036556 CG5830 [Drosophila melanogaster (taxid:7227)]

 Score = 197 (74.4 bits), Expect = 1.8e-15, P = 1.8e-15
 Identities = 41/100 (41%), Positives = 64/100 (64%)

Query:   147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
             ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D  N+F  RL+R S   
Sbjct:   123 VHQVYVLKRPHVDEFLQKMGELYECVLFTASLAKYADPVADLLDKWNVFRARLFRESCVY 182

Query:   207 TEYR-EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
               YR  ++KDL+ L +DL + +IVDN+P S++  P N +P
Sbjct:   183 --YRGNYIKDLNRLGRDLQKIVIVDNSPASYIFHPDNAVP 220

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q2KJ43 CTDSP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 44/106 (41%), Positives = 65/106 (61%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct:   130 EIEGTT--HQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 187

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
             +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct:   188 FRESCVFHQGC-YVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232

GO:0008420 "CTD phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691
3rd Layer	3.1.3.16	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
TIGR02251	162	TIGR02251, HIF-SF_euk, Dullard-like phosphatase do	7e-53
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	4e-44
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	3e-41
COG5190	390	COG5190, FCP1, TFIIF-interacting CTD phosphatases,	3e-16
TIGR02250	156	TIGR02250, FCP1_euk, FCP1-like phosphatase, phosph	2e-05

>gnl|CDD|233801 TIGR02251, HIF-SF_euk, Dullard-like phosphatase domain

 Score =  169 bits (430), Expect = 7e-53
 Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 24/179 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K T+VLDLDETLV     S+  +   +    A  K   +             KI  V VF
Sbjct: 1   KKTLVLDLDETLVH----STFKMPKVD----ADFKVPVLIDG----------KIIPVYVF 42

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREH 212
           +RP + EFL+++S++ +L++FTA LE YA P++D +D    + S RLYR S   T  + +
Sbjct: 43  KRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK-Y 101

Query: 213 VKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFLLS 271
           VKDLS + KDL + +I+DN+P+S+ LQP N IP   +  G P+D ++L    L+ FL  
Sbjct: 102 VKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF-GDPNDTELL---NLIPFLEG 156

This model represents the putative phosphatase domain of a family of eukaryotic proteins including "Dullard" , and the NLI interacting factor (NIF)-like phosphatases. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDNxPxxa) and aparrently lacking the last aspartate. This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the pfam03031. Length = 162

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score =  146 bits (370), Expect = 4e-44
 Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 19/166 (11%)

Query: 93  QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTV 152
           +K T+VLDLDETLV +   S    T R+                           + V V
Sbjct: 1   KKKTLVLDLDETLVHSTHRSFKEWTNRDFIV----------------PVLIDGHPHGVYV 44

Query: 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLR-LYRPSTTSTEYRE 211
            +RPG+ EFLK+ SE  +L++FTAGL  YA P++D +D +  F  R L+R      + + 
Sbjct: 45  KKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK- 103

Query: 212 HVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN 257
           +VKDLS L++DL + +I+D++P S+   P N IP  P+    P D 
Sbjct: 104 YVKDLSLLNRDLSKVIIIDDSPDSWPFHPENLIPIKPWFGD-PDDT 148

Length = 148

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score =  138 bits (351), Expect = 3e-41
 Identities = 71/176 (40%), Positives = 96/176 (54%), Gaps = 31/176 (17%)

Query: 95  LTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFE 154
            T+VLDLDETLV +     LP                                + V V +
Sbjct: 1   KTLVLDLDETLVHSSFEPDLPFDFVL------------------------NFNHGVYVKK 36

Query: 155 RPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHV 213
           RPGL EFL++LS++ ++++FTA  + YA P++D++D +   F  RLYR S T      +V
Sbjct: 37  RPGLDEFLQELSKYYEIVIFTASSKEYADPVLDKLDPKKKYFKHRLYRESCT-----FYV 91

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFL 269
           KDLS L +DL R +IVDN+P SFLLQP NGIP  PF  G P D ++L  +  LK L
Sbjct: 92  KDLSLLGRDLSRVVIVDNSPRSFLLQPDNGIPIPPFY-GDPDDTELLKLLPFLKEL 146

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|227517 COG5190, FCP1, TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

 Score = 77.5 bits (191), Expect = 3e-16
 Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 21/175 (12%)

Query: 86  VVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKP 145
            VS+    K T+VLDLDETLV    +S   +TL +         F ++        E   
Sbjct: 204 PVSKSTSPKKTLVLDLDETLV---HSSFRYITLLD---------FLVKV-------EISL 244

Query: 146 KINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
             + V V +RP L  FL +LS+  +L+ FTA ++ YA P++D +D + +FS RL+R S  
Sbjct: 245 LQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCV 304

Query: 206 STEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVL 260
           S     ++KD+S + + L + +I+DN+P S+   P N IP I       HD+++L
Sbjct: 305 SYL-GVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIP-IEKWISDEHDDELL 357

Length = 390

>gnl|CDD|131304 TIGR02250, FCP1_euk, FCP1-like phosphatase, phosphatase domain

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 20/115 (17%)

Query: 91  RLQKLTVVLDLDETLVCAYETSSL------PVTLRNQATGAGLKWFEMECLSSDKECEGK 144
           R +KL +VLDLD+TL+   +  +L       +   N  T   L+ F +            
Sbjct: 3   REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG----------- 51

Query: 145 PKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLR 198
             + ++T   RP L EFLK+ S+  ++ ++T G   YA+ +   ID +   F  R
Sbjct: 52  -TMWYLTKL-RPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDR 104

This model represents the phosphatase domain of the humanRNA polymerase II subunit A C-terminal domain phosphatase (FCP1, ) and closely related phosphatases from eukaryotes including plants, fungi and slime mold. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDDppphW). This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3.This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the pfam03031. Length = 156

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	100.0
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	100.0
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	100.0
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	100.0
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	99.96
KOG2832	393	consensus TFIIF-interacting CTD phosphatase, inclu	99.95
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.95
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	99.89
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	99.69
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.18
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.17
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.13
PRK11587	218	putative phosphatase; Provisional	99.12
PRK13288	214	pyrophosphatase PpaX; Provisional	99.11
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.11
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.06
PLN02575	381	haloacid dehalogenase-like hydrolase	99.06
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.05
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.03
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.02
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.01
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.0
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.99
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	98.99
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	98.97
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.97
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.97
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.94
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.94
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.93
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	98.92
PRK09449	224	dUMP phosphatase; Provisional	98.9
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.89
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	98.88
PLN02940	382	riboflavin kinase	98.88
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	98.87
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.87
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	98.85
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	98.84
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.84
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	98.83
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	98.83
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.79
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	98.77
PRK13222	226	phosphoglycolate phosphatase; Provisional	98.76
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.76
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	98.76
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.75
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.74
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.72
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.71
PHA02597	197	30.2 hypothetical protein; Provisional	98.71
COG4996	164	Predicted phosphatase [General function prediction	98.7
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.7
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.67
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.62
COG0546	220	Gph Predicted phosphatases [General function predi	98.61
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.59
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.58
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.53
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.5
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.5
PHA02530	300	pseT polynucleotide kinase; Provisional	98.5
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.47
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.4
PRK06769	173	hypothetical protein; Validated	98.35
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.32
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.27
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.25
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.2
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.2
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.16
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.11
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	98.06
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.06
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.97
PLN02954	224	phosphoserine phosphatase	97.97
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.97
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	97.88
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.84
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.83
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.83
PRK11133	322	serB phosphoserine phosphatase; Provisional	97.83
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	97.83
PLN02811	220	hydrolase	97.81
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	97.57
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.53
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.45
PRK08238	479	hypothetical protein; Validated	97.44
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	97.43
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	97.32
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	97.27
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.25
PRK10748	238	flavin mononucleotide phosphatase; Provisional	97.23
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.19
PTZ00445	219	p36-lilke protein; Provisional	97.09
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	96.96
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.95
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.94
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.68
PRK11590	211	hypothetical protein; Provisional	96.64
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.55
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	96.53
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	96.49
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.4
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	96.33
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.3
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	96.26
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.05
PRK10444	248	UMP phosphatase; Provisional	96.02
COG4359	220	Uncharacterized conserved protein [Function unknow	95.91
PRK10513	270	sugar phosphate phosphatase; Provisional	95.9
PRK01158	230	phosphoglycolate phosphatase; Provisional	95.88
PLN02645	311	phosphoglycolate phosphatase	95.75
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	95.75
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	95.68
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	95.58
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.56
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	95.56
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.56
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	95.53
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	95.47
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	95.42
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.39
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.38
PRK10976	266	putative hydrolase; Provisional	95.35
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.23
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	95.21
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	94.99
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	94.93
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	94.87
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	94.81
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	94.76
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	94.69
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	94.66
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	94.44
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	94.38
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	94.34
PTZ00174	247	phosphomannomutase; Provisional	94.01
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	93.95
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	93.18
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	92.87
PLN02423	245	phosphomannomutase	92.69
PLN02887	580	hydrolase family protein	92.6
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	92.56
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	92.22
COG2503	274	Predicted secreted acid phosphatase [General funct	91.94
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	91.71
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	91.4
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	90.69
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	89.89
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	89.78
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	89.68
PRK10748	238	flavin mononucleotide phosphatase; Provisional	89.53
COG4229	229	Predicted enolase-phosphatase [Energy production a	88.76
PLN02151	354	trehalose-phosphatase	87.62
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	87.27
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	87.23
PLN03017	366	trehalose-phosphatase	86.96
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	86.77
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	86.77
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	85.98
PLN02580	384	trehalose-phosphatase	85.8
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	83.55
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	83.45
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	82.26
KOG4549	144	consensus Magnesium-dependent phosphatase [General	81.46
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	80.46

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=100.00  E-value=6.9e-41  Score=302.76  Aligned_cols=168  Identities=41%  Similarity=0.587  Sum_probs=143.6

Q ss_pred             cccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc
Q 023829           89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF  168 (276)
Q Consensus        89 ~~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~  168 (276)
                      ....+|++|||||||||+||...  ++....        ..|.++     +..+|  ....+||++|||+++||+.++++
T Consensus        84 ~~~~~kk~lVLDLDeTLvHss~~--~~~~~~--------~d~~~~-----v~~~~--~~~~~yV~kRP~vdeFL~~~s~~  146 (262)
T KOG1605|consen   84 LATVGRKTLVLDLDETLVHSSLN--LKPIVN--------ADFTVP-----VEIDG--HIHQVYVRKRPHVDEFLSRVSKW  146 (262)
T ss_pred             cccCCCceEEEeCCCcccccccc--cCCCCC--------cceeee-----eeeCC--cceEEEEEcCCCHHHHHHHhHHH
Confidence            34568999999999999997421  111111        012221     22332  34578999999999999999999


Q ss_pred             ceEEEEccCchhhHHHHHHHhcC-CCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          169 ADLILFTAGLEGYARPLVDRIDG-ENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       169 yelvI~Ts~~~~yA~~vl~~Ldp-~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      ||+++|||+.+.||.+|++.||+ .+.|++|+||++|+.. ++.|+|||..+|+|+++||||||+|.+|.+||+|||+|+
T Consensus       147 ~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~-~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~  225 (262)
T KOG1605|consen  147 YELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK-DGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIK  225 (262)
T ss_pred             HHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE-CCcEEEEcceeccCcccEEEEcCChHHhccCccCCCccc
Confidence            99999999999999999999999 6789999999999986 589999999999999999999999999999999999999


Q ss_pred             ccCCCCCCChHHhHHHHHHHHhhhcCCC
Q 023829          248 PFSAGQPHDNQVLTNVTLLKFLLSSLNH  275 (276)
Q Consensus       248 ~f~~g~~~D~eL~~l~~~L~~La~~~d~  275 (276)
                      +|. +++.|+||++|+|||++|+.++||
T Consensus       226 sw~-~d~~D~eLL~LlpfLe~L~~~~Dv  252 (262)
T KOG1605|consen  226 SWF-DDPTDTELLKLLPFLEALAFVDDV  252 (262)
T ss_pred             ccc-cCCChHHHHHHHHHHHHhcccccH
Confidence            998 788999999999999999999776

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=100.00  E-value=6.2e-38  Score=266.40  Aligned_cols=161  Identities=43%  Similarity=0.639  Sum_probs=137.7

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL  173 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelvI  173 (276)
                      |++|||||||||||+.....    ..    .+   .|.+.+.     ..|  ...++|+++|||+++||++|+++|+++|
T Consensus         1 k~~lvlDLDeTLi~~~~~~~----~~----~~---~~~~~~~-----~~~--~~~~~~v~~RPgl~eFL~~l~~~yei~I   62 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMP----KV----DA---DFKVPVL-----IDG--KIIPVYVFKRPHVDEFLERVSKWYELVI   62 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCC----CC----CC---ceEEEEE-----ecC--cEEEEEEEECCCHHHHHHHHHhcCEEEE
Confidence            68999999999999853211    00    11   1211111     111  2457899999999999999999999999


Q ss_pred             EccCchhhHHHHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCC
Q 023829          174 FTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       174 ~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      ||++.+.||++++++||+.+ +|.++++|++|...+ +.+.|+|+.+|+++++||+|||++..|..+++|||+|.+|. |
T Consensus        63 ~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~-~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~-~  140 (162)
T TIGR02251        63 FTASLEEYADPVLDILDRGGKVISRRLYRESCVFTN-GKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF-G  140 (162)
T ss_pred             EcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeC-CCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC-C
Confidence            99999999999999999987 899999999998765 45999999999999999999999999999999999999998 8


Q ss_pred             CCCChHHhHHHHHHHHhhhcCC
Q 023829          253 QPHDNQVLTNVTLLKFLLSSLN  274 (276)
Q Consensus       253 ~~~D~eL~~l~~~L~~La~~~d  274 (276)
                      +.+|++|.+|++||+.|++.+|
T Consensus       141 ~~~D~~L~~l~~~L~~l~~~~~  162 (162)
T TIGR02251       141 DPNDTELLNLIPFLEGLRFEDD  162 (162)
T ss_pred             CCCHHHHHHHHHHHHHHhccCC
Confidence            9999999999999999999876

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=100.00  E-value=6.9e-36  Score=251.09  Aligned_cols=156  Identities=41%  Similarity=0.629  Sum_probs=120.2

Q ss_pred             eEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEEE
Q 023829           95 LTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILF  174 (276)
Q Consensus        95 ~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelvI~  174 (276)
                      |+|||||||||||+...+..+..            +..        .   .....+++++|||+++||++|+++|+++||
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~------------~~~--------~---~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~   57 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYD------------FKI--------I---DQRGGYYVKLRPGLDEFLEELSKHYEVVIW   57 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-S------------EEE--------E---TEEEEEEEEE-TTHHHHHHHHHHHCEEEEE
T ss_pred             CEEEEeCCCcEEEEeecCCCCcc------------cce--------e---ccccceeEeeCchHHHHHHHHHHhceEEEE
Confidence            68999999999998654322100            000        0   023467899999999999999999999999


Q ss_pred             ccCchhhHHHHHHHhcCC-CceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCCC
Q 023829          175 TAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ  253 (276)
Q Consensus       175 Ts~~~~yA~~vl~~Ldp~-~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~  253 (276)
                      |++++.||++|++.|+|+ .+|.++++|++|...+ +.+.|||+++|++++++|+|||++.+|..+++|+|.|++|. ++
T Consensus        58 T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~-~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~-~~  135 (159)
T PF03031_consen   58 TSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDK-GSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFF-GD  135 (159)
T ss_dssp             -SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEET-TEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----S-SC
T ss_pred             EeehhhhhhHHHHhhhhhccccccccccccccccc-cccccchHHHhhccccEEEEeCCHHHeeccCCceEEecccc-CC
Confidence            999999999999999995 6899999999998665 35589999999999999999999999999999999999998 67


Q ss_pred             -CCChHHhHHHHHHHHhhhcCCC
Q 023829          254 -PHDNQVLTNVTLLKFLLSSLNH  275 (276)
Q Consensus       254 -~~D~eL~~l~~~L~~La~~~d~  275 (276)
                       ++|++|.+|+++|++|++.+||
T Consensus       136 ~~~D~~L~~l~~~L~~l~~~~Dv  158 (159)
T PF03031_consen  136 TPNDRELLRLLPFLEELAKEDDV  158 (159)
T ss_dssp             HTT--HHHHHHHHHHHHHTHS-C
T ss_pred             CcchhHHHHHHHHHHHhCcccCC
Confidence             8999999999999999999887

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=100.00  E-value=2.3e-35  Score=257.49  Aligned_cols=149  Identities=23%  Similarity=0.282  Sum_probs=123.6

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceE
Q 023829           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADL  171 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yel  171 (276)
                      .+|++|||||||||+|+....                                   .+.++.+|||+++||++|+++|||
T Consensus        19 ~~kklLVLDLDeTLvh~~~~~-----------------------------------~~~~~~kRP~l~eFL~~~~~~feI   63 (195)
T TIGR02245        19 EGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGEELMRPYLHEFLTSAYEDYDI   63 (195)
T ss_pred             CCCcEEEEeCCCceEcccccC-----------------------------------CCceEEeCCCHHHHHHHHHhCCEE
Confidence            378999999999999852100                                   124578999999999999999999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC--ceeEEEECCCccc-----cCCc-cccccccccCc------CCCcEEEEEcCccccc
Q 023829          172 ILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTS-----TEYR-EHVKDLSCLSK------DLCRTLIVDNNPFSFL  237 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~--~f~~rl~r~~c~~-----~k~~-~~~KdL~~L~r------d~~~~IiVDDsp~~~~  237 (276)
                      +||||+++.||+.+++.|+..+  .+...++.++|..     ...+ .++|||+.+|+      +++|||+|||+|.++.
T Consensus        64 vVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~  143 (195)
T TIGR02245        64 VIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFL  143 (195)
T ss_pred             EEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHh
Confidence            9999999999999999997542  3444555577631     1223 36999998853      8899999999999999


Q ss_pred             CCCCCeeeeCccCC---CCCCChHHhHHHHHHHHhhhcCCC
Q 023829          238 LQPLNGIPCIPFSA---GQPHDNQVLTNVTLLKFLLSSLNH  275 (276)
Q Consensus       238 ~~p~NgI~V~~f~~---g~~~D~eL~~l~~~L~~La~~~d~  275 (276)
                      .||+|||+|++|..   +++.|+||++|++||+.||+.+||
T Consensus       144 ~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL~~la~~~Dv  184 (195)
T TIGR02245       144 MNPQNGLKIRPFKKAHANRGTDQELLKLTQYLKTIAELEDF  184 (195)
T ss_pred             cCCCCccccCCccccCCCCcccHHHHHHHHHHHHHhcCccc
Confidence            99999999999984   357899999999999999999997

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=99.96  E-value=2.2e-29  Score=212.94  Aligned_cols=143  Identities=24%  Similarity=0.320  Sum_probs=112.1

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhh--h--hcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRN--Q--ATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF  168 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~--~--~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~  168 (276)
                      +|++||||||+|||||............  +  ..+...+.|.+...           ...+++++|||+++||+.|++.
T Consensus         5 ~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-----------~~~~~v~~rPgv~efL~~l~~~   73 (156)
T TIGR02250         5 KKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG-----------TMWYLTKLRPFLHEFLKEASKL   73 (156)
T ss_pred             CceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcC-----------CeEEEEEECCCHHHHHHHHHhh
Confidence            7999999999999998764433322110  0  00000011111110           2457899999999999999999


Q ss_pred             ceEEEEccCchhhHHHHHHHhcCCC-ceeE-EEECCCccccCCccccccccc-cCcCCCcEEEEEcCcccccCCCCCeee
Q 023829          169 ADLILFTAGLEGYARPLVDRIDGEN-LFSL-RLYRPSTTSTEYREHVKDLSC-LSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (276)
Q Consensus       169 yelvI~Ts~~~~yA~~vl~~Ldp~~-~f~~-rl~r~~c~~~k~~~~~KdL~~-L~rd~~~~IiVDDsp~~~~~~p~NgI~  245 (276)
                      |+++|||++.+.||+++++.|||.+ +|.. +++|++|.    +.+.|||+. ++++++++|||||++.+|..||+|||+
T Consensus        74 yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~----~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~  149 (156)
T TIGR02250        74 YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG----SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQ  149 (156)
T ss_pred             cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC----CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEE
Confidence            9999999999999999999999996 7855 47799985    578999955 589999999999999999999999999


Q ss_pred             eCccC
Q 023829          246 CIPFS  250 (276)
Q Consensus       246 V~~f~  250 (276)
                      |++|.
T Consensus       150 i~~~~  154 (156)
T TIGR02250       150 IEPYN  154 (156)
T ss_pred             eCCcc
Confidence            99996

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=99.95  E-value=5.1e-28  Score=224.17  Aligned_cols=144  Identities=29%  Similarity=0.502  Sum_probs=132.8

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI  172 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelv  172 (276)
                      ++.||||||.++|||..|+-.                                  -.+.+++|||++.||.+|+++||||
T Consensus       188 p~yTLVleledvLVhpdws~~----------------------------------tGwRf~kRPgvD~FL~~~a~~yEIV  233 (393)
T KOG2832|consen  188 PPYTLVLELEDVLVHPDWSYK----------------------------------TGWRFKKRPGVDYFLGHLAKYYEIV  233 (393)
T ss_pred             CCceEEEEeeeeEeccchhhh----------------------------------cCceeccCchHHHHHHhhcccceEE
Confidence            589999999999999654210                                  1245889999999999999999999


Q ss_pred             EEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCC
Q 023829          173 LFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       173 I~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      |||+....++.++++.+||.|+++++++|++|.+. ++.++|||++|+||++++|+||-.++.+.+||+|+|.+++|. |
T Consensus       234 i~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~-~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~-G  311 (393)
T KOG2832|consen  234 VYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYE-EGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWS-G  311 (393)
T ss_pred             EEecCCccchhhhHhhcCCcceEEEEEecCccccc-CccchhhhhhhccccceeEEEEccccccccCcccccccCcCC-C
Confidence            99999999999999999999999999999999875 589999999999999999999999999999999999999997 9


Q ss_pred             CCCChHHhHHHHHHHHhhhc
Q 023829          253 QPHDNQVLTNVTLLKFLLSS  272 (276)
Q Consensus       253 ~~~D~eL~~l~~~L~~La~~  272 (276)
                      +++|+.|.+|++||+.|+..
T Consensus       312 n~dDt~L~dL~~FL~~ia~~  331 (393)
T KOG2832|consen  312 NDDDTSLFDLLAFLEYIAQQ  331 (393)
T ss_pred             CcccchhhhHHHHHHHHHHc
Confidence            99999999999999999864

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.95  E-value=3.3e-27  Score=197.27  Aligned_cols=147  Identities=40%  Similarity=0.545  Sum_probs=120.0

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI  172 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelv  172 (276)
                      +|++|||||||||+|+.+.+..+.......+.                .........+++++|||+++||++|++.|+++
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~   64 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVP----------------VLIDGHPHGVYVKKRPGVDEFLKRASELFELV   64 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCCCCccceEEE----------------EEeCCceEEEEEEECCCHHHHHHHHHhccEEE
Confidence            58999999999999986533222111111111                11112345678999999999999999889999


Q ss_pred             EEccCchhhHHHHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCC
Q 023829          173 LFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA  251 (276)
Q Consensus       173 I~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~  251 (276)
                      |||++.++|++.+++++++.+ +|..++++++|...|+. |.|+|+++|.++++||+|||++..+..++.|||.|++|. 
T Consensus        65 I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~-  142 (148)
T smart00577       65 VFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWF-  142 (148)
T ss_pred             EEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcC-
Confidence            999999999999999999965 56889999999987765 999999999999999999999999999999999999998 


Q ss_pred             CCCCCh
Q 023829          252 GQPHDN  257 (276)
Q Consensus       252 g~~~D~  257 (276)
                      |+++|+
T Consensus       143 ~~~~d~  148 (148)
T smart00577      143 GDPDDT  148 (148)
T ss_pred             CCCCCC
Confidence            777663

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.89  E-value=1.1e-23  Score=199.52  Aligned_cols=172  Identities=34%  Similarity=0.448  Sum_probs=144.4

Q ss_pred             CCCccccccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHH
Q 023829           83 GDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFL  162 (276)
Q Consensus        83 ~~~~~~~~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL  162 (276)
                      ..+...++...++++++|||+||+|+.....     .  .     ..|..       ..++......+|+..|||+++|+
T Consensus       201 l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~-----~--~-----~df~~-------~~e~~~~~~~~~v~kRp~l~~fl  261 (390)
T COG5190         201 LEPPVSKSTSPKKTLVLDLDETLVHSSFRYI-----T--L-----LDFLV-------KVEISLLQHLVYVSKRPELDYFL  261 (390)
T ss_pred             ccchhhcCCCCccccccCCCccceeeccccc-----c--c-----cchhh-------ccccccceeEEEEcCChHHHHHH
Confidence            3344557778899999999999999743211     0  0     00211       11222233578899999999999


Q ss_pred             HHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCC
Q 023829          163 KQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLN  242 (276)
Q Consensus       163 ~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~N  242 (276)
                      ..+++.|++++||++.+.|+++|++.|++.+.|++++||.+|.... +.|+|||..+++++..+|+||++|.+|.++|+|
T Consensus       262 ~~ls~~~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~~~-G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~  340 (390)
T COG5190         262 GKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVSYL-GVYIKDISKIGRSLDKVIIIDNSPASYEFHPEN  340 (390)
T ss_pred             hhhhhhEEEEEEecchhhhcchHHHhccccceeehhhhcccceecc-CchhhhHHhhccCCCceEEeeCChhhhhhCccc
Confidence            9999999999999999999999999999999999999999999875 569999999999999999999999999999999


Q ss_pred             eeeeCccCCCCCCChHHhHHHHHHHHhhh--cCCC
Q 023829          243 GIPCIPFSAGQPHDNQVLTNVTLLKFLLS--SLNH  275 (276)
Q Consensus       243 gI~V~~f~~g~~~D~eL~~l~~~L~~La~--~~d~  275 (276)
                      +|++++|. +++.|++|++++++|+.|+.  ..||
T Consensus       341 ~i~i~~W~-~d~~d~el~~ll~~le~L~~~~~~d~  374 (390)
T COG5190         341 AIPIEKWI-SDEHDDELLNLLPFLEDLPDRDLKDV  374 (390)
T ss_pred             eeccCccc-ccccchhhhhhcccccccccccchhh
Confidence            99999997 78899999999999999988  5544

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.69  E-value=8.4e-17  Score=160.41  Aligned_cols=150  Identities=26%  Similarity=0.248  Sum_probs=106.7

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL  173 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelvI  173 (276)
                      ++.+|+|||.||+|+...+.+-+.......+.    +..+....-..+........+|+++|||+++||+.+++.|+|+|
T Consensus       146 ~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~----~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhV  221 (635)
T KOG0323|consen  146 KLHLVLDLDHTLLHTILKSDLSETEKYLKEEA----ESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHV  221 (635)
T ss_pred             cceeehhhhhHHHHhhccchhhhhhhhccccc----ccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEE
Confidence            36999999999999865444433322111000    00000000000000011236899999999999999999999999


Q ss_pred             EccCchhhHHHHHHHhcCCC-ceeEE-EECCCccccCCccccccccccC-cCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          174 FTAGLEGYARPLVDRIDGEN-LFSLR-LYRPSTTSTEYREHVKDLSCLS-KDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       174 ~Ts~~~~yA~~vl~~Ldp~~-~f~~r-l~r~~c~~~k~~~~~KdL~~L~-rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ||.|.+.||..|++.|||++ +|..| ++|++-.    ..-.+||..++ .+.+++|||||+..+|..++.|.|.|.+|.
T Consensus       222 yTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~----~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~  297 (635)
T KOG0323|consen  222 YTMGTRDYALEIAKLIDPEGKYFGDRIISRDESP----FFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP  297 (635)
T ss_pred             EeccchHHHHHHHHHhCCCCccccceEEEecCCC----cccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence            99999999999999999997 78766 5677722    23367777764 567889999999999999999999999987


Q ss_pred             C
Q 023829          251 A  251 (276)
Q Consensus       251 ~  251 (276)
                      +
T Consensus       298 y  298 (635)
T KOG0323|consen  298 Y  298 (635)
T ss_pred             c
Confidence            5

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.18  E-value=4e-12  Score=112.99  Aligned_cols=100  Identities=16%  Similarity=0.186  Sum_probs=93.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.+||+.|... ..+++-|++.+..++.+++.++...+|..++++++....|+.  .|.+.+++||.++++||+
T Consensus        85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv  164 (221)
T COG0637          85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV  164 (221)
T ss_pred             CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence            46899999999999988 999999999999999999999999999999999988877765  799999999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccCC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFSA  251 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~~  251 (276)
                      |||++.........|+.|--+..
T Consensus       165 iEDs~~Gi~Aa~aAGm~vv~v~~  187 (221)
T COG0637         165 VEDSPAGIQAAKAAGMRVVGVPA  187 (221)
T ss_pred             EecchhHHHHHHHCCCEEEEecC
Confidence            99999999988889999998874

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.17  E-value=1.2e-11  Score=112.71  Aligned_cols=99  Identities=17%  Similarity=0.199  Sum_probs=88.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++..++|..+++.+++...|+.  .|.+.++++|.++++|++
T Consensus       108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~  187 (260)
T PLN03243        108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV  187 (260)
T ss_pred             cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence            45789999999999977 999999999999999999999988899999999887666655  688899999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |+|+...+.....+|+.+..+.
T Consensus       188 IgDs~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        188 FGNSNSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             EcCCHHHHHHHHHcCCEEEEEe
Confidence            9999999988888898776664

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.13  E-value=2.5e-11  Score=109.30  Aligned_cols=99  Identities=12%  Similarity=0.144  Sum_probs=88.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|++|++. +.++|.|++.+.+++.++++++..++|..+++.+++...|+.  .+.+.+++++.++++|++
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~  186 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFV  186 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEE
Confidence            45789999999999876 999999999999999999999999999999999987766655  688889999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |+|++........+|+.+.-..
T Consensus       187 vgDs~~Di~aA~~aGi~~i~v~  208 (248)
T PLN02770        187 FEDSVSGIKAGVAAGMPVVGLT  208 (248)
T ss_pred             EcCCHHHHHHHHHCCCEEEEEe
Confidence            9999998888888888876554

>PRK11587 putative phosphatase; Provisional

Probab=99.12  E-value=3.3e-11  Score=106.03  Aligned_cols=99  Identities=14%  Similarity=0.106  Sum_probs=81.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|.+. +.++|.|++...++...++.... ..|..+++.+++...|+.  .|.+.++.+|.++++||+
T Consensus        82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~  160 (218)
T PRK11587         82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV  160 (218)
T ss_pred             ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            45799999999999876 99999999999888888877665 456777777776555554  678889999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccCC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFSA  251 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~~  251 (276)
                      |+|++........+|+.+.-+..
T Consensus       161 igDs~~di~aA~~aG~~~i~v~~  183 (218)
T PRK11587        161 VEDAPAGVLSGLAAGCHVIAVNA  183 (218)
T ss_pred             EecchhhhHHHHHCCCEEEEECC
Confidence            99999998888888988766653

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.11  E-value=5.1e-11  Score=104.23  Aligned_cols=97  Identities=18%  Similarity=0.129  Sum_probs=84.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. +.++|.|++.+.+++.+++.++..++|..++..+++...|+.  .+.+-++.++.+++++++
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~  160 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM  160 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence            45789999999999976 999999999999999999999999999999998887655543  577888889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|++.-+.....+|+.+..
T Consensus       161 iGDs~~Di~aa~~aG~~~i~  180 (214)
T PRK13288        161 VGDNHHDILAGKNAGTKTAG  180 (214)
T ss_pred             ECCCHHHHHHHHHCCCeEEE
Confidence            99999988888788887553

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.11  E-value=9.8e-11  Score=100.90  Aligned_cols=103  Identities=13%  Similarity=0.085  Sum_probs=81.7

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccC-chhhHHHHHHHhcCC---------CceeEEEECCCccccCCc-cccccccc
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRIDGE---------NLFSLRLYRPSTTSTEYR-EHVKDLSC  218 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~-~~~yA~~vl~~Ldp~---------~~f~~rl~r~~c~~~k~~-~~~KdL~~  218 (276)
                      .+..+||+.++|+.|.+. +.+.|.|++ ...+++.+++.++..         .+|..+++.+.....++. ...+.+..
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~  122 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK  122 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence            367899999999999976 999999998 999999999999877         889888887653322211 22333333


Q ss_pred             c---CcCCCcEEEEEcCcccccCCCCCeeeeCccCCCC
Q 023829          219 L---SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ  253 (276)
Q Consensus       219 L---~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~  253 (276)
                      .   |.++++|++|||++..+.....+|+.+--...|.
T Consensus       123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence            2   5889999999999999998899999988776444

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.06  E-value=6.8e-11  Score=105.09  Aligned_cols=94  Identities=16%  Similarity=0.045  Sum_probs=83.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. +.++|.|++.+.+++..++.++...+|..+++.++....|+.  .|.+-++++|.++++|++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~  171 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF  171 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            45789999999999987 999999999999999999998888899999888877666654  578888999999999999


Q ss_pred             EEcCcccccCCCCCeee
Q 023829          229 VDNNPFSFLLQPLNGIP  245 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~  245 (276)
                      |+|++..+.....+|+.
T Consensus       172 igDs~~di~aA~~aG~~  188 (224)
T PRK14988        172 IDDSEPILDAAAQFGIR  188 (224)
T ss_pred             EcCCHHHHHHHHHcCCe
Confidence            99999988888888885

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.06  E-value=5.4e-11  Score=113.79  Aligned_cols=99  Identities=13%  Similarity=0.132  Sum_probs=88.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.+||+.|.+. +.++|.|++.+.+++.+++.++..++|..++..+++...|+.  .|.+.++.+|.++++||+
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~  294 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIV  294 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            34789999999999987 999999999999999999999999999999999988766654  688899999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |+|++..+.....+|+.+....
T Consensus       295 IGDS~~DIeAAk~AGm~~IgV~  316 (381)
T PLN02575        295 FGNSNQTVEAAHDARMKCVAVA  316 (381)
T ss_pred             EcCCHHHHHHHHHcCCEEEEEC
Confidence            9999999888888888777664

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.05  E-value=4.1e-11  Score=102.25  Aligned_cols=96  Identities=9%  Similarity=0.113  Sum_probs=82.6

Q ss_pred             eeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..-||+ +.|+.+.+.+.++|.|++...+++.+++.++..++|..+++.+++...|+.  .+.+.+++++.++++||+|+
T Consensus        88 ~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ig  166 (188)
T PRK10725         88 EPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFE  166 (188)
T ss_pred             CCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEe
Confidence            355764 899999877999999999999999999999999999999999887666655  57888888999999999999


Q ss_pred             cCcccccCCCCCeeeeCcc
Q 023829          231 NNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f  249 (276)
                      |++..+.....+|+.+...
T Consensus       167 Ds~~di~aA~~aG~~~i~~  185 (188)
T PRK10725        167 DADFGIQAARAAGMDAVDV  185 (188)
T ss_pred             ccHhhHHHHHHCCCEEEee
Confidence            9999998888888876543

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.03  E-value=1.8e-10  Score=102.37  Aligned_cols=97  Identities=12%  Similarity=0.090  Sum_probs=83.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++..++|..++..+++...|+.  .+.+.++++|.++++|++
T Consensus        94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~  173 (229)
T PRK13226         94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY  173 (229)
T ss_pred             CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            56899999999999987 899999999999999999999888889888888876655554  578888899999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|++........+|+.+..
T Consensus       174 IGDs~~Di~aA~~aG~~~i~  193 (229)
T PRK13226        174 VGDDERDILAARAAGMPSVA  193 (229)
T ss_pred             eCCCHHHHHHHHHCCCcEEE
Confidence            99999888777778887653

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.02  E-value=1.3e-10  Score=104.47  Aligned_cols=102  Identities=10%  Similarity=-0.015  Sum_probs=87.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCccccCCc--cccccccccCc-CCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~k~~--~~~KdL~~L~r-d~~~~  226 (276)
                      +...||+.++|++|++. +.++|.|++...+++.+++.++..++| ..+++.++....|+.  .+.+.++++|. ++++|
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~  177 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC  177 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence            45789999999999987 999999999999999999999988886 788888876655554  67888899997 49999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccCCCC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFSAGQ  253 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~~g~  253 (276)
                      |+|.|++.-+.....+|+.+.....|.
T Consensus       178 l~IGDs~~Di~aA~~aGi~~i~v~~g~  204 (253)
T TIGR01422       178 VKVGDTVPDIEEGRNAGMWTVGLILSS  204 (253)
T ss_pred             EEECCcHHHHHHHHHCCCeEEEEecCC
Confidence            999999999888888898877665443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.01  E-value=2.1e-10  Score=99.64  Aligned_cols=99  Identities=18%  Similarity=0.164  Sum_probs=85.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +..+||+.++|+.|++. +.++|.|++...+++.++++++..++|..++..++....|+.  .+.+.++++|.+++++++
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~  163 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVY  163 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence            46899999999999877 999999999999999999999988899988888766544543  578888999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |+|++..+.....+|+.+-...
T Consensus       164 igDs~~d~~aa~~aG~~~i~v~  185 (213)
T TIGR01449       164 VGDSRVDIQAARAAGCPSVLLT  185 (213)
T ss_pred             eCCCHHHHHHHHHCCCeEEEEc
Confidence            9999998887777888776553

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.00  E-value=1.2e-10  Score=101.22  Aligned_cols=97  Identities=16%  Similarity=0.113  Sum_probs=84.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|++|.+. +.++|.|++...+++.+++.++..++|..+++.+++...|+.  .+.+.++.++.+++++++
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~  153 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM  153 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence            55789999999999976 999999999999999999999999999999888876554543  567778889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|++..+.....+|+.+..
T Consensus       154 igD~~~Di~aA~~~Gi~~i~  173 (205)
T TIGR01454       154 VGDAVTDLASARAAGTATVA  173 (205)
T ss_pred             EcCCHHHHHHHHHcCCeEEE
Confidence            99999888888888887654

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.99  E-value=1.1e-10  Score=99.81  Aligned_cols=93  Identities=22%  Similarity=0.246  Sum_probs=79.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccc----cCCc--cccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS----TEYR--EHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~----~k~~--~~~KdL~~L~rd~~~  225 (276)
                      +...||+.++|+.|+  +.++|.|++....+..+++.++..++|..++..++...    .|+.  .|.+-++++|.++++
T Consensus        83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  160 (184)
T TIGR01993        83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER  160 (184)
T ss_pred             CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence            346799999999998  68999999999999999999988889999988876554    2443  678888899999999


Q ss_pred             EEEEEcCcccccCCCCCeeee
Q 023829          226 TLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      +++|+|++........+|+.+
T Consensus       161 ~l~vgD~~~di~aA~~~G~~~  181 (184)
T TIGR01993       161 AIFFDDSARNIAAAKALGMKT  181 (184)
T ss_pred             eEEEeCCHHHHHHHHHcCCEE
Confidence            999999998877777777764

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=98.99  E-value=1.9e-10  Score=100.61  Aligned_cols=98  Identities=16%  Similarity=0.135  Sum_probs=84.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|++|.+. +.++|.|++...+++..++.++...+|..+++.++....|+.  .|.+.++++|.+++++|+
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  172 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVM  172 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence            56899999999999987 999999999999999999999999999999998887766654  678889999999999999


Q ss_pred             EEcCc-ccccCCCCCeeeeCcc
Q 023829          229 VDNNP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~V~~f  249 (276)
                      |+|++ ..+.....+|+.+.-.
T Consensus       173 igDs~~~di~~A~~aG~~~i~~  194 (221)
T TIGR02253       173 VGDRLDKDIKGAKNLGMKTVWI  194 (221)
T ss_pred             ECCChHHHHHHHHHCCCEEEEE
Confidence            99998 5666666677765444

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=98.97  E-value=1.3e-10  Score=98.62  Aligned_cols=93  Identities=12%  Similarity=0.123  Sum_probs=79.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|.+. +.++|.|++  .+++.+++.++..++|..++..+.+...|+.  .+.+-++.++.+++++|+
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~  164 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV  164 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            56899999999999987 999999988  7799999998888899999888776655544  567788888999999999


Q ss_pred             EEcCcccccCCCCCeeee
Q 023829          229 VDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V  246 (276)
                      |+|+...+.....+|+.+
T Consensus       165 IgD~~~di~aA~~~G~~~  182 (185)
T TIGR02009       165 FEDALAGVQAARAAGMFA  182 (185)
T ss_pred             EeCcHhhHHHHHHCCCeE
Confidence            999998888777788764

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.97  E-value=1.3e-10  Score=97.92  Aligned_cols=94  Identities=19%  Similarity=0.233  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. +.++|.|++.... ..+..+++..++|..+++.+++...|+.  .|.+-++.+|.+++++++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  162 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF  162 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence            46789999999999976 9999999999999 7777768888899999988777666654  577778889999999999


Q ss_pred             EEcCcccccCCCCCeeee
Q 023829          229 VDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V  246 (276)
                      |||++.........|+..
T Consensus       163 vgD~~~di~aA~~~G~~~  180 (183)
T TIGR01509       163 VDDSPAGIEAAKAAGMHT  180 (183)
T ss_pred             EcCCHHHHHHHHHcCCEE
Confidence            999998877666777653

HAD subfamilies caused by an overly broad single model.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.97  E-value=4.1e-10  Score=103.36  Aligned_cols=96  Identities=14%  Similarity=0.113  Sum_probs=79.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD  230 (276)
                      +...||+.++|++|.+. +.++|.|++...+++.+++.++..++|..+++.+... .+...+.+-+++++.++++|++|+
T Consensus       141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IG  219 (273)
T PRK13225        141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVG  219 (273)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEEC
Confidence            34679999999999977 9999999999999999999999999999887765542 233356666777888999999999


Q ss_pred             cCcccccCCCCCeeeeCc
Q 023829          231 NNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~  248 (276)
                      |++........+|+.+.-
T Consensus       220 Ds~~Di~aA~~AG~~~I~  237 (273)
T PRK13225        220 DETRDVEAARQVGLIAVA  237 (273)
T ss_pred             CCHHHHHHHHHCCCeEEE
Confidence            999888777778887654

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.94  E-value=8.5e-11  Score=97.14  Aligned_cols=96  Identities=19%  Similarity=0.248  Sum_probs=82.9

Q ss_pred             EEeeCccHHHHHHHhh-hcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829          151 TVFERPGLREFLKQLS-EFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~-~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      .....||+.++|+.|+ +.+.++|.|++....++.+++.+....+|..+++.+++...|+.  .|.+-++.+|.++++++
T Consensus        75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~  154 (176)
T PF13419_consen   75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL  154 (176)
T ss_dssp             GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred             ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence            4779999999999999 45999999999999999999999888899999998887766664  57788888999999999


Q ss_pred             EEEcCcccccCCCCCeeee
Q 023829          228 IVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V  246 (276)
                      +|||++.........|+..
T Consensus       155 ~vgD~~~d~~~A~~~G~~~  173 (176)
T PF13419_consen  155 FVGDSPSDVEAAKEAGIKT  173 (176)
T ss_dssp             EEESSHHHHHHHHHTTSEE
T ss_pred             EEeCCHHHHHHHHHcCCeE
Confidence            9999998776666666643

...

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.94  E-value=6.9e-10  Score=90.56  Aligned_cols=82  Identities=17%  Similarity=0.019  Sum_probs=67.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccC-chhhHHHHHHHhc-------CCCceeEEEECCCccccCCccccccccccC--c
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRID-------GENLFSLRLYRPSTTSTEYREHVKDLSCLS--K  221 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~-~~~yA~~vl~~Ld-------p~~~f~~rl~r~~c~~~k~~~~~KdL~~L~--r  221 (276)
                      ...||+.++|+.|++. +.++|.|++ .+.++..+++...       ..++|..+...+..  .+...+.+-++++|  .
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~--pkp~~~~~a~~~lg~~~  106 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL--PKSPRLVEIALKLNGVL  106 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC--cHHHHHHHHHHHhcCCC
Confidence            3789999999999976 999999999 8999999999877       55677776655442  23346788888899  9


Q ss_pred             CCCcEEEEEcCcccc
Q 023829          222 DLCRTLIVDNNPFSF  236 (276)
Q Consensus       222 d~~~~IiVDDsp~~~  236 (276)
                      ++++|++|||++...
T Consensus       107 ~p~~~l~igDs~~n~  121 (128)
T TIGR01681       107 KPKSILFVDDRPDNN  121 (128)
T ss_pred             CcceEEEECCCHhHH
Confidence            999999999998763

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.93  E-value=4.7e-10  Score=98.24  Aligned_cols=95  Identities=11%  Similarity=0.078  Sum_probs=81.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEECCCccccCCc--cccccccccCcC-CCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd-~~~  225 (276)
                      ..+.||+.++|++|++. +.++|.|++...+++.+++.++..  .+|..+++.++....|+.  .+.+-+++++.. +++
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  165 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS  165 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence            45899999999999876 999999999999999999999887  889988888775444443  577888889886 799


Q ss_pred             EEEEEcCcccccCCCCCeeee
Q 023829          226 TLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      |++|+|++.........|+.+
T Consensus       166 ~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       166 VAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             eEEeCCCHHHHHHHHHCCCCe
Confidence            999999998888777888876

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=98.92  E-value=4.4e-10  Score=98.93  Aligned_cols=99  Identities=12%  Similarity=0.037  Sum_probs=86.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|++. +.++|.|++....++.+++.++..++|..++..+.....|+.  .+.+-++.+|.++++|++
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  170 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVA  170 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            45789999999999977 999999999999999999999999999999988876555544  678888899999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |+|++........+|+.+.-+.
T Consensus       171 igDs~~Di~aA~~aG~~~i~v~  192 (222)
T PRK10826        171 LEDSFNGMIAAKAARMRSIVVP  192 (222)
T ss_pred             EcCChhhHHHHHHcCCEEEEec
Confidence            9999998888888888876664

>PRK09449 dUMP phosphatase; Provisional

Probab=98.90  E-value=5.4e-10  Score=98.16  Aligned_cols=95  Identities=20%  Similarity=0.217  Sum_probs=80.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCc-CCCcEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~r-d~~~~Ii  228 (276)
                      +...||+.++|+.|++.+.++|.|++....++..++.++..++|..+++.+++...|+.  .|.+-++.+|. +.++|++
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~  173 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM  173 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence            45789999999999977999999999999999999999888999999998888766665  67888899986 4589999


Q ss_pred             EEcCcc-cccCCCCCeeee
Q 023829          229 VDNNPF-SFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~-~~~~~p~NgI~V  246 (276)
                      |+|++. .......+|+.+
T Consensus       174 vgD~~~~Di~~A~~aG~~~  192 (224)
T PRK09449        174 VGDNLHSDILGGINAGIDT  192 (224)
T ss_pred             EcCCcHHHHHHHHHCCCcE
Confidence            999984 666666667654

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.89  E-value=6.3e-10  Score=97.63  Aligned_cols=96  Identities=8%  Similarity=0.084  Sum_probs=81.2

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee-EEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~-~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|.  +.++|.|++.+.+++.++++.+...+|. .+++.++....|+.  .|.+-++++|.++++||+
T Consensus        87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~  164 (221)
T PRK10563         87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL  164 (221)
T ss_pred             CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            457899999999994  8999999999999999999999888995 56677666655554  678888999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |+|++.........|+.+.-+
T Consensus       165 igDs~~di~aA~~aG~~~i~~  185 (221)
T PRK10563        165 VDDSSAGAQSGIAAGMEVFYF  185 (221)
T ss_pred             EeCcHhhHHHHHHCCCEEEEE
Confidence            999999888878888877544

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=98.88  E-value=4.6e-10  Score=97.93  Aligned_cols=98  Identities=11%  Similarity=0.020  Sum_probs=83.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--ccccccccc-CcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL-SKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L-~rd~~~~Ii  228 (276)
                      +..+||+.++|+++++.+.++|-|++....++.+++.++..++|..+++.+++...|++  .|.+.++.+ |.+++++|+
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~  175 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM  175 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence            56899999999999988999999999999999999999998999999998887766655  577888999 999999999


Q ss_pred             EEcCc-ccccCCCCCeeeeCcc
Q 023829          229 VDNNP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~V~~f  249 (276)
                      |+|++ ..+.....+|+...-+
T Consensus       176 igD~~~~di~~A~~~G~~~i~~  197 (224)
T TIGR02254       176 IGDSLTADIKGGQNAGLDTCWM  197 (224)
T ss_pred             ECCCcHHHHHHHHHCCCcEEEE
Confidence            99998 5666666677654433

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN02940 riboflavin kinase

Probab=98.88  E-value=5.1e-10  Score=107.32  Aligned_cols=99  Identities=11%  Similarity=0.160  Sum_probs=85.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHH-HhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD-RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~-~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      +...||+.++|++|.+. +.++|.|++.+.+++.+++ ..+..++|..+++.+++...|+.  .+.+.++.+|.++++||
T Consensus        92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l  171 (382)
T PLN02940         92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL  171 (382)
T ss_pred             CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEE
Confidence            34789999999999887 9999999999999999887 67777899999999988766654  67888899999999999


Q ss_pred             EEEcCcccccCCCCCeeeeCccC
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|+|+.........+|+.+.-..
T Consensus       172 ~VGDs~~Di~aA~~aGi~~I~v~  194 (382)
T PLN02940        172 VIEDSLPGVMAGKAAGMEVIAVP  194 (382)
T ss_pred             EEeCCHHHHHHHHHcCCEEEEEC
Confidence            99999998887878888765543

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=98.87  E-value=1.2e-09  Score=99.24  Aligned_cols=101  Identities=11%  Similarity=-0.024  Sum_probs=84.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCccccCCc--cccccccccCcC-CCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~k~~--~~~KdL~~L~rd-~~~~  226 (276)
                      +...||+.++|+.|++. +.++|.|++.+..++.+++.+...++| ..+++.+++...|+.  .+.+.++++|.+ +++|
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~  179 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC  179 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence            45789999999999977 999999999999999999998877775 777888876655554  678888999975 6999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccCCC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      |+|+|++..+.....+|+.+.....|
T Consensus       180 l~IGDs~~Di~aA~~aG~~~i~v~~g  205 (267)
T PRK13478        180 VKVDDTVPGIEEGLNAGMWTVGVILS  205 (267)
T ss_pred             EEEcCcHHHHHHHHHCCCEEEEEccC
Confidence            99999999888888888876655433

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.87  E-value=1.7e-09  Score=99.02  Aligned_cols=95  Identities=19%  Similarity=0.285  Sum_probs=80.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ...+||+.++|+.|++. +.++|.|++...+++.+++.++..++|..+++.+.+...|+.  .+.+-++++|.++++||+
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~  179 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF  179 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence            34789999999999876 999999999999999999998888889888887766554443  466777888999999999


Q ss_pred             EEcCcccccCCCCCeeee
Q 023829          229 VDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V  246 (276)
                      |+|+.........+|+.+
T Consensus       180 IGD~~~Di~aA~~aGi~~  197 (272)
T PRK13223        180 VGDSRSDVLAAKAAGVQC  197 (272)
T ss_pred             ECCCHHHHHHHHHCCCeE
Confidence            999998887777788754

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=98.85  E-value=1.8e-09  Score=99.59  Aligned_cols=100  Identities=13%  Similarity=0.183  Sum_probs=79.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc---eeEEEECCCccccCCc--cccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL---FSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~---f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~  225 (276)
                      +...||+.++|+.|++. +.++|.|++...++..+++.+...++   |..+ ..+++...|+.  .+.+-++.+|.++++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            46899999999999986 99999999999999999987743333   3333 66666555554  678888999999999


Q ss_pred             EEEEEcCcccccCCCCCeeeeCccCCC
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      +|+|+|++..+.....+|+.+.-...|
T Consensus       222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g  248 (286)
T PLN02779        222 CVVVEDSVIGLQAAKAAGMRCIVTKSS  248 (286)
T ss_pred             EEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence            999999999888888888876655433

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=98.84  E-value=5.4e-10  Score=97.38  Aligned_cols=99  Identities=16%  Similarity=-0.007  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhh--HHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY--ARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~y--A~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~  226 (276)
                      +...||+.++|+.|++. +.++|.|++....  +...+..++...+|..++..+++...|+.  .|.+.++++|.++++|
T Consensus        93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~  172 (211)
T TIGR02247        93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC  172 (211)
T ss_pred             cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            55789999999999976 9999999987655  33333334455678888877766555554  6778889999999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++|||++.........|+...-+.
T Consensus       173 l~i~D~~~di~aA~~aG~~~i~v~  196 (211)
T TIGR02247       173 VFLDDLGSNLKPAAALGITTIKVS  196 (211)
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEEC
Confidence            999999999888888899887775

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.84  E-value=1.1e-08  Score=82.95  Aligned_cols=93  Identities=12%  Similarity=0.139  Sum_probs=69.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc--------hhhHHHHHHHhcCCCceeEEEECCCccccCCcccccccccc-Cc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGL--------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL-SK  221 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~--------~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L-~r  221 (276)
                      ....||+.++|++|.+. +.++|.|++.        ..+++.+++.++..  +...++...+...+...+.+-++.+ +.
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~  101 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACPHCRKPKPGMFLEALKRFNEI  101 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence            34789999999999877 9999999999        88899999988765  3333333322222223567788888 59


Q ss_pred             CCCcEEEEEc-CcccccCCCCCeeee
Q 023829          222 DLCRTLIVDN-NPFSFLLQPLNGIPC  246 (276)
Q Consensus       222 d~~~~IiVDD-sp~~~~~~p~NgI~V  246 (276)
                      +++++++|+| +...+.....+|+..
T Consensus       102 ~~~~~v~IGD~~~~Di~~A~~~Gi~~  127 (132)
T TIGR01662       102 DPEESVYVGDQDLTDLQAAKRAGLAF  127 (132)
T ss_pred             ChhheEEEcCCCcccHHHHHHCCCeE
Confidence            9999999999 677777777777754

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=98.83  E-value=7.9e-10  Score=93.80  Aligned_cols=93  Identities=11%  Similarity=0.128  Sum_probs=77.2

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ...||+.++|+.|++. +.++|.|++.  .+..++++++...+|..++..++....|+.  .|.+.+++++.+++++|+|
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v  164 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI  164 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence            5789999999999977 9999999864  467889998888899998887765544444  5788888999999999999


Q ss_pred             EcCcccccCCCCCeeeeC
Q 023829          230 DNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~  247 (276)
                      +|++..+.....+|+.+.
T Consensus       165 gD~~~di~aA~~aG~~~i  182 (185)
T TIGR01990       165 EDAQAGIEAIKAAGMFAV  182 (185)
T ss_pred             ecCHHHHHHHHHcCCEEE
Confidence            999988887778888653

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=98.83  E-value=1.4e-09  Score=94.09  Aligned_cols=92  Identities=13%  Similarity=0.023  Sum_probs=75.7

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ...||+.++|+.|++. +.++|.|++... ++.+++.++..++|..++..+++...|+.  .+.+.++.+|.+++++|+|
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I  183 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI  183 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence            5689999999999987 999999998875 47888888888899999888877666654  5778888999999999999


Q ss_pred             EcCc-ccccCCCCCeee
Q 023829          230 DNNP-FSFLLQPLNGIP  245 (276)
Q Consensus       230 DDsp-~~~~~~p~NgI~  245 (276)
                      +|++ .-+......|+.
T Consensus       184 gD~~~~Di~~A~~aG~~  200 (203)
T TIGR02252       184 GDSLRNDYQGARAAGWR  200 (203)
T ss_pred             CCCchHHHHHHHHcCCe
Confidence            9997 456555566664

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.79  E-value=6.8e-09  Score=86.30  Aligned_cols=94  Identities=17%  Similarity=0.184  Sum_probs=66.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEEC-----CCccccCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR  210 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~---------------~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~  210 (276)
                      ....||+.++|+.|++. |.++|.|++..               ..+..+++.++..  +...++.     +.....|+.
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~KP~  103 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA--VDGVLFCPHHPADNCSCRKPK  103 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence            35789999999999977 99999999874               4566666666553  2222222     222222333


Q ss_pred             --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                        .+.+-++.++.++++|++|+|+..-......+|+..-
T Consensus       104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v  142 (147)
T TIGR01656       104 PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV  142 (147)
T ss_pred             HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence              5677778889999999999999888777777777543

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=98.77  E-value=4.6e-09  Score=90.90  Aligned_cols=82  Identities=12%  Similarity=0.167  Sum_probs=70.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..|+..++|+.|++. +.++|.|++.+.+++.+++.++...+|..+++.++... |+.  .+.+.++.+|.++++||+|+
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG  185 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG  185 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence            445669999999977 99999999999999999999999999999988887654 544  57788888999999999999


Q ss_pred             cCcccc
Q 023829          231 NNPFSF  236 (276)
Q Consensus       231 Dsp~~~  236 (276)
                      |++...
T Consensus       186 D~~~Di  191 (197)
T TIGR01548       186 DTVDDI  191 (197)
T ss_pred             CCHHHH
Confidence            998654

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=98.76  E-value=8.1e-09  Score=90.29  Aligned_cols=96  Identities=19%  Similarity=0.199  Sum_probs=79.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ...+||+.+||+.+++. +.++|.|++...+++.+++.++..++|...+..+.+...|+.  .+.+-++.++.+++++++
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  171 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF  171 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence            55899999999999976 999999999999999999999888888887777665444433  467778888999999999


Q ss_pred             EEcCcccccCCCCCeeeeC
Q 023829          229 VDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~  247 (276)
                      |+|++..+......|+.+-
T Consensus       172 igD~~~Di~~a~~~g~~~i  190 (226)
T PRK13222        172 VGDSRNDIQAARAAGCPSV  190 (226)
T ss_pred             ECCCHHHHHHHHHCCCcEE
Confidence            9999988777666766433

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.76  E-value=2.5e-09  Score=92.82  Aligned_cols=99  Identities=11%  Similarity=0.030  Sum_probs=83.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-cCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L-dp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      ...+||+.++|+.+++. +.++|.|++....+..++... ....+|..+++.+++...|+.  .|.+.++.+|.++++|+
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  162 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV  162 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence            45799999999999876 999999999988776655442 345679999998888877765  67888899999999999


Q ss_pred             EEEcCcccccCCCCCeeeeCccC
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|||++..+......|+.+.-+.
T Consensus       163 ~vgD~~~di~aA~~aG~~~i~~~  185 (199)
T PRK09456        163 FFDDNADNIEAANALGITSILVT  185 (199)
T ss_pred             EeCCCHHHHHHHHHcCCEEEEec
Confidence            99999999888888999987775

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=98.76  E-value=4.3e-09  Score=102.98  Aligned_cols=95  Identities=16%  Similarity=0.156  Sum_probs=78.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccc-cCCccccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS-TEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~-~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|++|++. +.++|.|++..++++.+++.++..++|..+++.++... .++..+.+.++.++  +++||+|
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~V  406 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVV  406 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEE
Confidence            45789999999999876 99999999999999999999999999999998887532 33445666666664  5889999


Q ss_pred             EcCcccccCCCCCeeeeCc
Q 023829          230 DNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~  248 (276)
                      .|++.-+.....+|+.+.-
T Consensus       407 GDs~~Di~aAk~AG~~~I~  425 (459)
T PRK06698        407 GDRLSDINAAKDNGLIAIG  425 (459)
T ss_pred             eCCHHHHHHHHHCCCeEEE
Confidence            9999988888888876533

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.75  E-value=3.4e-09  Score=87.62  Aligned_cols=83  Identities=19%  Similarity=0.124  Sum_probs=68.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|.+. +.++|.|++.+..++.+++.+ ...+|..++..+++. .|+.  .+.+-++++|.++ +|++
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~  139 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH  139 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence            33569999999999866 999999999999999999996 556788888877765 5544  5778888889888 9999


Q ss_pred             EEcCccccc
Q 023829          229 VDNNPFSFL  237 (276)
Q Consensus       229 VDDsp~~~~  237 (276)
                      |.|++....
T Consensus       140 iGDs~~Di~  148 (154)
T TIGR01549       140 VGDNLNDIE  148 (154)
T ss_pred             EeCCHHHHH
Confidence            999976543

HAD subfamilies caused by an overly broad single model.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.74  E-value=2.3e-08  Score=85.48  Aligned_cols=93  Identities=13%  Similarity=0.110  Sum_probs=67.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch----hhHH-----------HHHHHhcCCCceeEEEECC-----------Cc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLE----GYAR-----------PLVDRIDGENLFSLRLYRP-----------ST  204 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~----~yA~-----------~vl~~Ldp~~~f~~rl~r~-----------~c  204 (276)
                      +.+.||+.++|++|++. |.++|.|++..    .+++           .++..+...  |..++++.           .|
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~  102 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC  102 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence            44789999999999987 99999999985    2333           333332222  55555532           33


Q ss_pred             cccCCc--cccccccccCcCCCcEEEEEcCcccccCCCCCeeee
Q 023829          205 TSTEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       205 ~~~k~~--~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      ...|+.  .+.+-++++|.+++++++|+|++........+|+.+
T Consensus       103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213       103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcE
Confidence            333443  677888899999999999999999888777888764

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.72  E-value=2.2e-08  Score=87.64  Aligned_cols=98  Identities=17%  Similarity=0.224  Sum_probs=74.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEE-----------CCCcccc-CCccccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLY-----------RPSTTST-EYREHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~-----------r~~c~~~-k~~~~~KdL~~  218 (276)
                      +..+||+.+||+.|.+. +.++|.|++...+++.+++.++...+|...+.           .+.+... |...+.+-++.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  163 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK  163 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence            45899999999999986 99999999999999999999887777754322           1111111 22245566677


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++.++++|++|+|+..........|+.+ .|.
T Consensus       164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~  194 (219)
T TIGR00338       164 EGISPENTVAVGDGANDLSMIKAAGLGI-AFN  194 (219)
T ss_pred             cCCCHHHEEEEECCHHHHHHHHhCCCeE-EeC
Confidence            8889999999999998887766677776 453

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.71  E-value=1.3e-08  Score=80.11  Aligned_cols=89  Identities=19%  Similarity=0.188  Sum_probs=66.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc----------------CCc--cc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST----------------EYR--EH  212 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~----------------k~~--~~  212 (276)
                      ...+|++.++|+.|.+. +.++|.|++...+++.+++.+.....+..++..+.....                +..  .+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            45899999999999998 999999999999999999998766566666654433221                222  33


Q ss_pred             cccccccCcCCCcEEEEEcCcccccCCC
Q 023829          213 VKDLSCLSKDLCRTLIVDNNPFSFLLQP  240 (276)
Q Consensus       213 ~KdL~~L~rd~~~~IiVDDsp~~~~~~p  240 (276)
                      .+-++.++.+.+.+++|+|+........
T Consensus       103 ~~~~~~~~~~~~~~~~igD~~~d~~~~~  130 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDSLNDIEMAK  130 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCCHHHHHHHH
Confidence            4445556677899999999997654433

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PHA02597 30

Probab=98.71  E-value=2.1e-09  Score=92.81  Aligned_cols=99  Identities=16%  Similarity=0.087  Sum_probs=76.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCC----ceeEEEECCCccccCCccccccccccCcCCCcEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN----LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~----~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~I  227 (276)
                      +...||+.++|+.|++.+.+++-|++.........+.+...+    +|+.+++.++... +...+.+.++++|  ++.+|
T Consensus        73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~--~~~~v  149 (197)
T PHA02597         73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYG--DRVVC  149 (197)
T ss_pred             ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhC--CCcEE
Confidence            458999999999999888888878877666655666664433    5677777776543 4456777888888  78899


Q ss_pred             EEEcCcccccCCCCC--eeeeCccCCCC
Q 023829          228 IVDNNPFSFLLQPLN--GIPCIPFSAGQ  253 (276)
Q Consensus       228 iVDDsp~~~~~~p~N--gI~V~~f~~g~  253 (276)
                      +|||+.........+  ||.+--+..|.
T Consensus       150 ~vgDs~~di~aA~~a~~Gi~~i~~~~~~  177 (197)
T PHA02597        150 FVDDLAHNLDAAHEALSQLPVIHMLRGE  177 (197)
T ss_pred             EeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence            999999999888888  99888776553

2 hypothetical protein; Provisional

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.70  E-value=5.1e-08  Score=79.93  Aligned_cols=150  Identities=19%  Similarity=0.096  Sum_probs=103.9

Q ss_pred             EEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEEEE
Q 023829           96 TVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLILF  174 (276)
Q Consensus        96 tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelvI~  174 (276)
                      .+|||+||||++....|++.++.+--.      .-.++      ...      ..-++++|++.+||+++... |-+..+
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs------~n~i~------Ds~------G~ev~L~~~v~~~l~warnsG~i~~~~   63 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRRVS------SNTIE------DSK------GREVHLFPDVKETLKWARNSGYILGLA   63 (164)
T ss_pred             cEEEeCCCcccccccchhcCCcceecC------cccee------cCC------CeEEEEcHHHHHHHHHHHhCCcEEEEe
Confidence            589999999998887888777654211      00111      112      23488999999999999988 999999


Q ss_pred             ccCchhhHHHHHHHhcCCCceeEEEECCCccccCCcccccccccc------CcCCCcEEEEEcCccccc---CCCCCeee
Q 023829          175 TAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL------SKDLCRTLIVDNNPFSFL---LQPLNGIP  245 (276)
Q Consensus       175 Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L------~rd~~~~IiVDDsp~~~~---~~p~NgI~  245 (276)
                      |...+.-|-++++.+|...+|.+.....+=  .|.....+-|..+      ...++++|.+||+...+.   .+-+|-=.
T Consensus        64 sWN~~~kA~~aLral~~~~yFhy~ViePhP--~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~  141 (164)
T COG4996          64 SWNFEDKAIKALRALDLLQYFHYIVIEPHP--YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKC  141 (164)
T ss_pred             ecCchHHHHHHHHHhchhhhEEEEEecCCC--hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeee
Confidence            999999999999999999999998877762  2323333444433      347899999999998763   23445444


Q ss_pred             eCccCCCCCCChHHhHHHHHHHHh
Q 023829          246 CIPFSAGQPHDNQVLTNVTLLKFL  269 (276)
Q Consensus       246 V~~f~~g~~~D~eL~~l~~~L~~L  269 (276)
                      ++.|. +-   ..-..+.++|...
T Consensus       142 ~~~~~-Di---~c~~ei~slLs~~  161 (164)
T COG4996         142 LEMWK-DI---SCYSEIFSLLSHV  161 (164)
T ss_pred             eEeec-ch---HHHHHHHHHHHhh
Confidence            45553 11   2334456665543

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.70  E-value=2.5e-07  Score=85.69  Aligned_cols=124  Identities=19%  Similarity=0.146  Sum_probs=92.0

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeC-ccHHHHHHHhhhc-ce
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF-AD  170 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~R-Pgl~eFL~~l~~~-ye  170 (276)
                      .++.+||||||||+...+                                        -+..| ||+.++|++|++. +.
T Consensus       127 ~~~~i~~D~D~TL~~~~~----------------------------------------~v~irdp~V~EtL~eLkekGik  166 (303)
T PHA03398        127 IPHVIVFDLDSTLITDEE----------------------------------------PVRIRDPFVYDSLDELKERGCV  166 (303)
T ss_pred             eccEEEEecCCCccCCCC----------------------------------------ccccCChhHHHHHHHHHHCCCE
Confidence            568999999999997421                                        14478 9999999999987 99


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCC---------------cccccccc---cc-------------
Q 023829          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY---------------REHVKDLS---CL-------------  219 (276)
Q Consensus       171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~---------------~~~~KdL~---~L-------------  219 (276)
                      ++|+|++.+++++.+++.++..++|..++..++......               ..++.|..   .|             
T Consensus       167 LaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~  246 (303)
T PHA03398        167 LVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRK  246 (303)
T ss_pred             EEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHH
Confidence            999999999999999999999999988888776544321               02234443   22             


Q ss_pred             -CcC-CCcEEEEEcCcccccCCCCCeeeeCccCCCCCCChH
Q 023829          220 -SKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ  258 (276)
Q Consensus       220 -~rd-~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~e  258 (276)
                       |.+ .+.+-+|||-+.+ ..+-+|-+.|.... ...+|-+
T Consensus       247 ~gvn~~KtiTLVDDl~~N-n~~YD~fv~v~rcp-~P~~DW~  285 (303)
T PHA03398        247 KGVNYFKTITLVDDLKSN-NYSYDYFVNVKRCP-EPVNDWD  285 (303)
T ss_pred             cCcceeccEEEeccCccc-CccceeEEEeeeCC-CCcHHHH
Confidence             323 3557899999876 35668889888885 3444433

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.67  E-value=5.3e-08  Score=82.73  Aligned_cols=98  Identities=13%  Similarity=0.063  Sum_probs=78.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC---------------chhhHHHHHHHhcCCCceeEEEEC-----CCccccCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR  210 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~---------------~~~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~  210 (276)
                      +..-||+.++|++|.+. |.++|.|+.               ...+++.+++.++..  |..++++     +++...|+.
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~  105 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK  105 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence            56889999999999987 999999996               356788888888886  7666654     555555553


Q ss_pred             --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCC
Q 023829          211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA  251 (276)
Q Consensus       211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~  251 (276)
                        .+..-++.++.+++++++|.|+..-......+|+.+--+..
T Consensus       106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~  148 (161)
T TIGR01261       106 IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE  148 (161)
T ss_pred             HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence              45566677888999999999998888888889999888863

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.62  E-value=1e-07  Score=81.67  Aligned_cols=95  Identities=14%  Similarity=0.093  Sum_probs=68.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEECCC-----ccccCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYRPS-----TTSTEYR  210 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~---------------~yA~~vl~~Ldp~~~f~~rl~r~~-----c~~~k~~  210 (276)
                      +...||+.++|++|++. |.++|.|++..               ++...+++.++.  .|..+++...     +...|+.
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~  105 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK  105 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence            45789999999999987 99999999873               223334443332  3666666432     3333443


Q ss_pred             --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCc
Q 023829          211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~  248 (276)
                        .+.+.++.+|.+++++++|+|++........+|+.+--
T Consensus       106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~  145 (181)
T PRK08942        106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVL  145 (181)
T ss_pred             HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEE
Confidence              57788888999999999999999887777777765443

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.61  E-value=2.1e-08  Score=88.70  Aligned_cols=99  Identities=18%  Similarity=0.174  Sum_probs=84.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ...-||+.+.|..+++. |.++|.|+.....++.+++.++...+|..+...+.+...|+.  ....-++.+|.+++++|+
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~  167 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALM  167 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEE
Confidence            35789999999999988 999999999999999999999999999999886666665554  466777888988789999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |=|+..-......+|+.+.-..
T Consensus       168 VGDs~~Di~aA~~Ag~~~v~v~  189 (220)
T COG0546         168 VGDSLNDILAAKAAGVPAVGVT  189 (220)
T ss_pred             ECCCHHHHHHHHHcCCCEEEEE
Confidence            9999999888888887655443

>TIGR01684 viral_ppase viral phosphatase

Probab=98.59  E-value=1.6e-07  Score=86.95  Aligned_cols=124  Identities=17%  Similarity=0.135  Sum_probs=92.3

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeC-ccHHHHHHHhhhc-ce
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF-AD  170 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~R-Pgl~eFL~~l~~~-ye  170 (276)
                      .++.+||||||||+...+                                        -+..| ||+.+.|++|.+. +.
T Consensus       125 ~~kvIvFDLDgTLi~~~~----------------------------------------~v~irdPgV~EaL~~LkekGik  164 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEE----------------------------------------PVRIRDPRIYDSLTELKKRGCI  164 (301)
T ss_pred             cceEEEEecCCCCcCCCC----------------------------------------ccccCCHHHHHHHHHHHHCCCE
Confidence            467999999999997411                                        14478 9999999999998 99


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc---------------ccccccc-----------------c
Q 023829          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLS-----------------C  218 (276)
Q Consensus       171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~---------------~~~KdL~-----------------~  218 (276)
                      ++|||++.+++++.+++.++..++|..+++.++....++.               .++.|..                 +
T Consensus       165 LaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~  244 (301)
T TIGR01684       165 LVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYD  244 (301)
T ss_pred             EEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHH
Confidence            9999999999999999999999999888887776544322               1233332                 2


Q ss_pred             cCcC-CCcEEEEEcCcccccCCCCCeeeeCccCCCCCCChH
Q 023829          219 LSKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ  258 (276)
Q Consensus       219 L~rd-~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~e  258 (276)
                      .|.+ .+.+-+|||-+.+ ..+-+|-+.|.... ...+|-+
T Consensus       245 ~gvn~~KtitLVDDl~~N-n~~YD~fv~v~rcp-~P~~DW~  283 (301)
T TIGR01684       245 LGVNYFKSITLVDDLADN-NFNYDYFVNVSRCP-VPVNDWD  283 (301)
T ss_pred             cCCceeeeEEEeccCccc-CccceeEEEeeeCC-CCchHHH
Confidence            2333 3557899998876 35668888888885 3444543

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.58  E-value=2.7e-08  Score=106.36  Aligned_cols=99  Identities=9%  Similarity=0.091  Sum_probs=87.1

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC-CceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~-~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ..||+.++|++|++. +.++|.|++...+++.+++.++.. .+|..+++.+++...|+.  .|.+.+++++.++++||+|
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I  241 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI  241 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence            589999999999987 999999999999999999999875 689999999888766654  6788899999999999999


Q ss_pred             EcCcccccCCCCCeeeeCccCCC
Q 023829          230 DNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      +|++..+.....+|+.+.-...+
T Consensus       242 gDs~~Di~AA~~aGm~~I~v~~~  264 (1057)
T PLN02919        242 EDALAGVQAARAAGMRCIAVTTT  264 (1057)
T ss_pred             cCCHHHHHHHHHcCCEEEEECCC
Confidence            99999988888889888776543

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.53  E-value=1.8e-07  Score=80.15  Aligned_cols=96  Identities=14%  Similarity=0.140  Sum_probs=71.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc------------cccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR------------EHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~------------~~~KdL~~  218 (276)
                      +..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|...+..++....+..            .+.+-++.
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            45899999999999977 999999999999999999999877777665543322211111            12222445


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      ++.+++++++|.|+..-.......|+.+.
T Consensus       159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a  187 (201)
T TIGR01491       159 LNPSLTETVAVGDSKNDLPMFEVADISIS  187 (201)
T ss_pred             hCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence            67889999999999987766666777653

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.50  E-value=4.5e-07  Score=77.32  Aligned_cols=91  Identities=10%  Similarity=0.052  Sum_probs=63.8

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchh------------hHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccc
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEG------------YARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSC  218 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~------------yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~  218 (276)
                      .-||+.+.|+.|.+. |.++|.|++...            +++.+++.++...  ...++.+.....|+.  .+..-++.
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~  120 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQ  120 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHH
Confidence            459999999999876 999999998763            5677788777642  334444443233332  45566677


Q ss_pred             cC--cCCCcEEEEEcCc--------ccccCCCCCeeee
Q 023829          219 LS--KDLCRTLIVDNNP--------FSFLLQPLNGIPC  246 (276)
Q Consensus       219 L~--rd~~~~IiVDDsp--------~~~~~~p~NgI~V  246 (276)
                      +|  .+++++++|.|++        .-......+|+..
T Consensus       121 ~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~  158 (166)
T TIGR01664       121 YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF  158 (166)
T ss_pred             cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence            77  8899999999997        2445555667654

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01686 FkbH FkbH-like domain

Probab=98.50  E-value=1.8e-07  Score=87.58  Aligned_cols=82  Identities=22%  Similarity=0.113  Sum_probs=66.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH----hcCCCceeEEEECCCccccCCccccccccccCcCCCcEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR----IDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~----Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~Ii  228 (276)
                      ..||+.++|+.|++. +.+.|.|+..+..|..+++.    +....+|..+...   ...+.....+-++.+|.+++.+|+
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vf  108 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFLF  108 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEE
Confidence            478999999999987 99999999999999999998    7777778765333   112333567777889999999999


Q ss_pred             EEcCcccccC
Q 023829          229 VDNNPFSFLL  238 (276)
Q Consensus       229 VDDsp~~~~~  238 (276)
                      |||++.....
T Consensus       109 idD~~~d~~~  118 (320)
T TIGR01686       109 IDDNPAERAN  118 (320)
T ss_pred             ECCCHHHHHH
Confidence            9999987643

The C-terminal portion of this domain is unique to this family (by BLAST).

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.50  E-value=1.3e-07  Score=86.92  Aligned_cols=131  Identities=16%  Similarity=0.142  Sum_probs=97.7

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      +++.+++|+||||....+...             .++..                 .......||+.++|+.|.+. +.+
T Consensus       157 ~~~~~~~D~dgtl~~~~~~~~-------------~~~~~-----------------~~~~~~~~~~~~~l~~l~~~g~~i  206 (300)
T PHA02530        157 LPKAVIFDIDGTLAKMGGRSP-------------YDWTK-----------------VKEDKPNPMVVELVKMYKAAGYEI  206 (300)
T ss_pred             CCCEEEEECCCcCcCCCCCCc-------------cchhh-----------------cccCCCChhHHHHHHHHHhCCCEE
Confidence            468899999999997532110             00000                 00123799999999999987 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC-ceeEEEECC-------CccccCCc--cccccccccCc-CCCcEEEEEcCcccccCCC
Q 023829          172 ILFTAGLEGYARPLVDRIDGEN-LFSLRLYRP-------STTSTEYR--EHVKDLSCLSK-DLCRTLIVDNNPFSFLLQP  240 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~-------~c~~~k~~--~~~KdL~~L~r-d~~~~IiVDDsp~~~~~~p  240 (276)
                      +|.|+.....++.+++.|+..+ +|..+...+       .+...++.  ...+.|..++. +.+.+++|||++.......
T Consensus       207 ~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~  286 (300)
T PHA02530        207 IVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWR  286 (300)
T ss_pred             EEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHH
Confidence            9999999999999999999997 887776666       22233333  45666777777 6799999999999999999


Q ss_pred             CCeeeeCccCCCC
Q 023829          241 LNGIPCIPFSAGQ  253 (276)
Q Consensus       241 ~NgI~V~~f~~g~  253 (276)
                      .+||.+-....|+
T Consensus       287 ~~Gi~~i~v~~g~  299 (300)
T PHA02530        287 RIGLECWQVAPGD  299 (300)
T ss_pred             HhCCeEEEecCCC
Confidence            9999887654343

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.47  E-value=4.2e-07  Score=82.03  Aligned_cols=90  Identities=8%  Similarity=0.067  Sum_probs=66.2

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~Ii  228 (276)
                      ..|++.+||+++.+. +.++|.|+.    .+.+++.+++.++..++|..++..+.....+.... .-++    ...-+|+
T Consensus       115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~----~~~i~i~  189 (237)
T TIGR01672       115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQ----DKNIRIH  189 (237)
T ss_pred             chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHH----hCCCeEE
Confidence            445599999999988 999999998    66799999999998888988877776543333211 1112    2233799


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |-|+..-+.....+|+.+..
T Consensus       190 vGDs~~DI~aAk~AGi~~I~  209 (237)
T TIGR01672       190 YGDSDNDITAAKEAGARGIR  209 (237)
T ss_pred             EeCCHHHHHHHHHCCCCEEE
Confidence            99999988777777776443

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.40  E-value=6.1e-07  Score=77.05  Aligned_cols=83  Identities=18%  Similarity=0.252  Sum_probs=53.9

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEcc-CchhhHHHHHHHhcCC----------CceeEEEECCCccccCCcccccccc-
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTA-GLEGYARPLVDRIDGE----------NLFSLRLYRPSTTSTEYREHVKDLS-  217 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts-~~~~yA~~vl~~Ldp~----------~~f~~rl~r~~c~~~k~~~~~KdL~-  217 (276)
                      -+.+-|++.+.|+.|++. .+|++.|. ..++.|+++++.|+..          .+|.+.-....+   | ..+.+.|. 
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs---K-~~Hf~~i~~  118 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGS---K-TTHFRRIHR  118 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS----H-HHHHHHHHH
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCc---h-HHHHHHHHH
Confidence            477999999999999987 99999995 5689999999999888          677765333332   1 23444443 


Q ss_pred             ccCcCCCcEEEEEcCccccc
Q 023829          218 CLSKDLCRTLIVDNNPFSFL  237 (276)
Q Consensus       218 ~L~rd~~~~IiVDDsp~~~~  237 (276)
                      ..|.+.+.++++||...+..
T Consensus       119 ~tgI~y~eMlFFDDe~~N~~  138 (169)
T PF12689_consen  119 KTGIPYEEMLFFDDESRNIE  138 (169)
T ss_dssp             HH---GGGEEEEES-HHHHH
T ss_pred             hcCCChhHEEEecCchhcce
Confidence            57899999999999987653

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK06769 hypothetical protein; Validated

Probab=98.35  E-value=4.8e-07  Score=77.39  Aligned_cols=99  Identities=11%  Similarity=0.036  Sum_probs=66.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhh-----HHHHHHHhcCCCceeEEEE----CCCccccCCc--ccccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY-----ARPLVDRIDGENLFSLRLY----RPSTTSTEYR--EHVKDLSCL  219 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~y-----A~~vl~~Ldp~~~f~~rl~----r~~c~~~k~~--~~~KdL~~L  219 (276)
                      +...||+.++|++|++. |.++|.|++....     .......+...++.....+    .+.+...|+.  .+.+.++++
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l  106 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH  106 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence            34789999999999987 9999999987421     1223333333332222222    2333333443  678888899


Q ss_pred             CcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          220 SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       220 ~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +.++++|++|+|++........+|+.+.-..
T Consensus       107 ~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~  137 (173)
T PRK06769        107 GLDLTQCAVIGDRWTDIVAAAKVNATTILVR  137 (173)
T ss_pred             CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence            9999999999999988777777777665443

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.32  E-value=8.4e-07  Score=78.20  Aligned_cols=95  Identities=13%  Similarity=0.111  Sum_probs=67.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--Ccee--EEEECCCccccCCc------------cccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFS--LRLYRPSTTSTEYR------------EHVK  214 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~--~rl~r~~c~~~k~~------------~~~K  214 (276)
                      +..+||+.+||++|.+. +.++|.|++...+++++++.+ ..  ..+.  ..+..+.....++.            ...+
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~  151 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS  151 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence            56899999999999977 999999999999999999987 32  2332  22333222211111            1234


Q ss_pred             cccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       215 dL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      .++.++.+..+||+|.|+..-......+|+.+.
T Consensus       152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA  184 (219)
T ss_pred             HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence            555667788899999999988776666677544

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.27  E-value=2.9e-06  Score=71.79  Aligned_cols=93  Identities=17%  Similarity=0.288  Sum_probs=66.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc--------------CC--ccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST--------------EY--REHVK  214 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~--------------k~--~~~~K  214 (276)
                      +..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..+++.+.....              ..  ....|
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            56999999999999876 999999999999999999998888888877764432110              00  01112


Q ss_pred             --cccccCcC-CCcEEEEEcCcccccCCCCCee
Q 023829          215 --DLSCLSKD-LCRTLIVDNNPFSFLLQPLNGI  244 (276)
Q Consensus       215 --dL~~L~rd-~~~~IiVDDsp~~~~~~p~NgI  244 (276)
                        -++.+... .+++|+|+|+...+.....+++
T Consensus       151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~  183 (188)
T TIGR01489       151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDV  183 (188)
T ss_pred             HHHHHHHHhhcCceEEEECCCcchhchHhcCCc
Confidence              22233333 7889999999988766555443

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.25  E-value=8.7e-07  Score=76.37  Aligned_cols=97  Identities=18%  Similarity=0.140  Sum_probs=84.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. |.++|.|++...+++.+++.++..++|..+++.++....|+.  .|.+-++.+|.+++++++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~  170 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF  170 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            44789999999999997 999999999999999999999888899999998887766654  577888899999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|++..+.....+|+.+.-
T Consensus       171 vgD~~~Di~~A~~~G~~~i~  190 (198)
T TIGR01428       171 VASNPWDLGGAKKFGFKTAW  190 (198)
T ss_pred             EeCCHHHHHHHHHCCCcEEE
Confidence            99999877777777876543

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.20  E-value=3.6e-07  Score=80.91  Aligned_cols=92  Identities=17%  Similarity=0.158  Sum_probs=73.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccC------C--ccccccccccCcC-
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTE------Y--REHVKDLSCLSKD-  222 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k------~--~~~~KdL~~L~rd-  222 (276)
                      ++.-|-|++||-.|.+.+ .++||++.+..|..++.+|+...+|..+++.+-....+      +  .-|.|..+..|.+ 
T Consensus        99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~  177 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS  177 (244)
T ss_pred             cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence            456677899999998877 99999999999999999999999999988866432111      1  1455666667876 


Q ss_pred             CCcEEEEEcCcccccCCCCCee
Q 023829          223 LCRTLIVDNNPFSFLLQPLNGI  244 (276)
Q Consensus       223 ~~~~IiVDDsp~~~~~~p~NgI  244 (276)
                      ++||+++|||..+......=|+
T Consensus       178 p~~t~FfDDS~~NI~~ak~vGl  199 (244)
T KOG3109|consen  178 PRNTYFFDDSERNIQTAKEVGL  199 (244)
T ss_pred             cCceEEEcCchhhHHHHHhccc
Confidence            9999999999999877665554

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.20  E-value=1.1e-06  Score=75.88  Aligned_cols=95  Identities=16%  Similarity=0.149  Sum_probs=64.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECC-Cc---ccc--CCccccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP-ST---TST--EYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~-~c---~~~--k~~~~~KdL~~L~rd~~~  225 (276)
                      +..+||+.++|+.|++.+.++|.|++...+++.+++.++...+|...+.-+ +.   ...  .......-++.++...++
T Consensus        67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~  146 (205)
T PRK13582         67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR  146 (205)
T ss_pred             CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence            447899999999999779999999999999999999998877775543221 10   000  111111222334445578


Q ss_pred             EEEEEcCcccccCCCCCeeee
Q 023829          226 TLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      ++.|.|+..-......+|+.|
T Consensus       147 ~v~iGDs~~D~~~~~aa~~~v  167 (205)
T PRK13582        147 VIAAGDSYNDTTMLGEADAGI  167 (205)
T ss_pred             EEEEeCCHHHHHHHHhCCCCE
Confidence            999999998764444444433

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.16  E-value=1.8e-06  Score=73.66  Aligned_cols=113  Identities=19%  Similarity=0.154  Sum_probs=81.4

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      +-+.||+|+||||.....                                         ....||+.++|+.|.+. +.+
T Consensus        24 ~v~~vv~D~Dgtl~~~~~-----------------------------------------~~~~pgv~e~L~~Lk~~g~~l   62 (170)
T TIGR01668        24 GIKGVVLDKDNTLVYPDH-----------------------------------------NEAYPALRDWIEELKAAGRKL   62 (170)
T ss_pred             CCCEEEEecCCccccCCC-----------------------------------------CCcChhHHHHHHHHHHcCCEE
Confidence            568899999999996310                                         12579999999999987 999


Q ss_pred             EEEccCc-hhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcc-cccCCCCCeeeeCcc
Q 023829          172 ILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPF-SFLLQPLNGIPCIPF  249 (276)
Q Consensus       172 vI~Ts~~-~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~-~~~~~p~NgI~V~~f  249 (276)
                      +|.|++. ...+..+++.++...+     .  .+.......+.+-++.++.+++++++|+|+.. -......+|+...-.
T Consensus        63 ~I~Sn~~~~~~~~~~~~~~gl~~~-----~--~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v  135 (170)
T TIGR01668        63 LIVSNNAGEQRAKAVEKALGIPVL-----P--HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV  135 (170)
T ss_pred             EEEeCCchHHHHHHHHHHcCCEEE-----c--CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence            9999998 6777777776654321     1  11111223567778888999999999999984 666666777766555


Q ss_pred             CCCC
Q 023829          250 SAGQ  253 (276)
Q Consensus       250 ~~g~  253 (276)
                      ..|.
T Consensus       136 ~~g~  139 (170)
T TIGR01668       136 EPLV  139 (170)
T ss_pred             ccCc
Confidence            4343

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.11  E-value=7.1e-06  Score=78.16  Aligned_cols=124  Identities=16%  Similarity=0.146  Sum_probs=83.8

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      +++.|+||-||||+.... ..                |.              ....-.+...||+.++|++|.+. |.+
T Consensus         1 ~~k~l~lDrDgtl~~~~~-~~----------------y~--------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL   49 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPP-TD----------------FQ--------------VDSLDKLAFEPGVIPALLKLQKAGYKL   49 (354)
T ss_pred             CCcEEEEeCCCCccCCCC-cc----------------cc--------------ccCcccceECcCHHHHHHHHHhCCCeE
Confidence            378999999999997421 00                00              00011256899999999999976 999


Q ss_pred             EEEccC---------------chhhHHHHHHHhcCCCceeEEEEC-----CCccccCCc--cccccccccCcCCCcEEEE
Q 023829          172 ILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       172 vI~Ts~---------------~~~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +|.|+.               ...++..+++.++.  .|..++++     ++|...|+.  .+..-++.++.+++++++|
T Consensus        50 ~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmI  127 (354)
T PRK05446         50 VMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVI  127 (354)
T ss_pred             EEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            999994               23445555555544  35555543     455554544  3344456678899999999


Q ss_pred             EcCcccccCCCCCeeeeCcc
Q 023829          230 DNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f  249 (276)
                      -|+..-......+|+..--.
T Consensus       128 GDs~sDi~aAk~aGi~~I~v  147 (354)
T PRK05446        128 GDRETDVQLAENMGIKGIRY  147 (354)
T ss_pred             cCCHHHHHHHHHCCCeEEEE
Confidence            99998777777788875544

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=98.06  E-value=4.5e-07  Score=81.02  Aligned_cols=99  Identities=14%  Similarity=0.173  Sum_probs=83.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc-CCCceeEEEE--CCCccccCCc--cccccccccCcCC-C
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID-GENLFSLRLY--RPSTTSTEYR--EHVKDLSCLSKDL-C  224 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld-p~~~f~~rl~--r~~c~~~k~~--~~~KdL~~L~rd~-~  224 (276)
                      ...-||+.++++.|..+ ..+.++|++.+..++..++++. .-+.|+....  .+.+...|+.  .|.+.++++|.++ +
T Consensus        91 ~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~  170 (222)
T KOG2914|consen   91 SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPS  170 (222)
T ss_pred             cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCcc
Confidence            55889999999999988 9999999999999999999876 5567877666  4455544443  7899999999988 9


Q ss_pred             cEEEEEcCcccccCCCCCeeeeCccC
Q 023829          225 RTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       225 ~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|++++|++.........|.+|.-..
T Consensus       171 k~lVfeds~~Gv~aa~aagm~vi~v~  196 (222)
T KOG2914|consen  171 KCLVFEDSPVGVQAAKAAGMQVVGVA  196 (222)
T ss_pred             ceEEECCCHHHHHHHHhcCCeEEEec
Confidence            99999999999988888888877765

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.06  E-value=3.5e-06  Score=76.10  Aligned_cols=87  Identities=11%  Similarity=0.140  Sum_probs=62.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcC--CCceeEEEECCCccccCCc--cccccccccCcC
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDG--ENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD  222 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~vl~~Ldp--~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd  222 (276)
                      ....||+.+||+++.+. ++|++.|+.    ...+++.+++.++.  ..+|..++..+..  .|+.  ...+       .
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~-------~  183 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLK-------K  183 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHH-------h
Confidence            44667799999999776 999999984    46688888887877  6778777766642  2222  2222       2


Q ss_pred             CCcEEEEEcCcccccCCCCCeeeeC
Q 023829          223 LCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       223 ~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      .+-+|+|.|+..-+.....+|+.+.
T Consensus       184 ~~i~I~IGDs~~Di~aA~~AGi~~I  208 (237)
T PRK11009        184 KNIRIFYGDSDNDITAAREAGARGI  208 (237)
T ss_pred             cCCeEEEcCCHHHHHHHHHcCCcEE
Confidence            2338999999988877777777653

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.97  E-value=2.9e-05  Score=77.50  Aligned_cols=112  Identities=14%  Similarity=0.035  Sum_probs=76.5

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023829           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye  170 (276)
                      ...+++.||+||||+........+..                             ..+ +...-||+.+.|+.|.+. |.
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg~~~~~~-----------------------------~~d-~~~l~pgV~e~L~~L~~~Gy~  215 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSGKVFPKG-----------------------------PDD-WQIIFPEIPEKLKELEADGFK  215 (526)
T ss_pred             ccCcEEEEECCCCccccCCCccCCCC-----------------------------HHH-eeecccCHHHHHHHHHHCCCE
Confidence            45789999999999964211111100                             001 122569999999999987 99


Q ss_pred             EEEEccCch------------hhHHHHHHHhcCCCceeEEEECCCccccCCc--ccccccccc----CcCCCcEEEEEcC
Q 023829          171 LILFTAGLE------------GYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL----SKDLCRTLIVDNN  232 (276)
Q Consensus       171 lvI~Ts~~~------------~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L----~rd~~~~IiVDDs  232 (276)
                      |+|+|+...            ..++.+++.++..  |...+..+.|...|+.  .+..-++.+    +.|++++++|-|+
T Consensus       216 IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDa  293 (526)
T TIGR01663       216 ICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDA  293 (526)
T ss_pred             EEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCc
Confidence            999999776            4577888887754  7766666666666654  333333333    4789999999999


Q ss_pred             ccc
Q 023829          233 PFS  235 (276)
Q Consensus       233 p~~  235 (276)
                      ..-
T Consensus       294 agr  296 (526)
T TIGR01663       294 AGR  296 (526)
T ss_pred             ccc
Confidence            844

Note that the EC number for the kinase function is: 2.7.1.78

>PLN02954 phosphoserine phosphatase

Probab=97.97  E-value=2.5e-05  Score=68.45  Aligned_cols=92  Identities=15%  Similarity=0.208  Sum_probs=62.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEE-CCC------------ccc-cCCccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLY-RPS------------TTS-TEYREHVK  214 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~~rl~-r~~------------c~~-~k~~~~~K  214 (276)
                      ...+||+.++|+.+.+. +.++|.|++.+.+++.+++.++..  .+|...+. .++            |.. .|.....+
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~  162 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH  162 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence            44789999999999877 999999999999999999998765  46654322 110            110 11111222


Q ss_pred             cccccCcCCCcEEEEEcCcccccCCCCCeee
Q 023829          215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (276)
Q Consensus       215 dL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~  245 (276)
                      -++.++  .+++|+|-|+..-......+|+.
T Consensus       163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~  191 (224)
T PLN02954        163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD  191 (224)
T ss_pred             HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence            222333  46899999999988775555554

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.97  E-value=4.6e-06  Score=69.98  Aligned_cols=85  Identities=9%  Similarity=0.066  Sum_probs=65.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ++.+|+.  -+++|++. +.++|.|+.....++.+++.+....+|...       ..+...+.+-++.+|.++++|++|-
T Consensus        29 ~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vG   99 (154)
T TIGR01670        29 FNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ-------SNKLIAFSDILEKLALAPENVAYIG   99 (154)
T ss_pred             EechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc-------cchHHHHHHHHHHcCCCHHHEEEEC
Confidence            4577776  79999876 999999999999999999999877766531       1222345566677888999999999


Q ss_pred             cCcccccCCCCCeee
Q 023829          231 NNPFSFLLQPLNGIP  245 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~  245 (276)
                      |+..-.......|+.
T Consensus       100 Ds~~D~~~~~~ag~~  114 (154)
T TIGR01670       100 DDLIDWPVMEKVGLS  114 (154)
T ss_pred             CCHHHHHHHHHCCCe
Confidence            999877665556655

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=97.88  E-value=1.3e-05  Score=76.90  Aligned_cols=146  Identities=27%  Similarity=0.335  Sum_probs=98.9

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023829           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA  169 (276)
Q Consensus        90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y  169 (276)
                      +..++..+|.|+|.|.+|+......|.... +.....+..+.      +...  -.....++++.||++..|+...++.|
T Consensus        22 ~q~~~~~l~~~~~~~~~h~~~~~~~p~~~~-~~~~~~~~~~~------~~~~--~~~~~~~~~k~~~~l~~~~~~i~~~~   92 (390)
T COG5190          22 RQDKKLILVVDLDQTIIHTTVDPNDPNNVN-QSLERTLKSVN------DRDP--VQEKCAYYVKARPKLFPFLTKISPLY   92 (390)
T ss_pred             hcCcccccccccccceecccccCCCCCchh-hhhhccccchh------cccc--ccccccceeeecccccchhhhhchhc
Confidence            445678899999999999754332222211 22222221111      1001  11235788999999999999999999


Q ss_pred             eEEEEccCchhhHHHHHHHhcCCC-ceeEEEE-CCCccccCCcccccccccc-CcCCCcEEEEEcCcccccCC--CCCee
Q 023829          170 DLILFTAGLEGYARPLVDRIDGEN-LFSLRLY-RPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQ--PLNGI  244 (276)
Q Consensus       170 elvI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~-r~~c~~~k~~~~~KdL~~L-~rd~~~~IiVDDsp~~~~~~--p~NgI  244 (276)
                      ++.++|.+.+.|++.+..++|+.| .|..+.. ++.-    .+.-.|-++++ ..+.+.++++||.+..|..+  -.|.+
T Consensus        93 e~~~~~~~~~~~~~~~~~i~d~~g~~~~d~~~~~~~~----~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v  168 (390)
T COG5190          93 ELHIYTMGTRAYAERIAKIIDPTGKLFNDRILSRDES----GSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFV  168 (390)
T ss_pred             ceeeEeeccccchhhhhhccccccccccccccccccc----ccchhhhhhhcCccccccccccccccccCCccchhhhhh
Confidence            999999999999999999999987 6665544 4432    23456777776 57888999999999998211  13455


Q ss_pred             eeCc
Q 023829          245 PCIP  248 (276)
Q Consensus       245 ~V~~  248 (276)
                      ...+
T Consensus       169 ~~~~  172 (390)
T COG5190         169 AKSP  172 (390)
T ss_pred             cccc
Confidence            4444

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.84  E-value=1.1e-05  Score=72.07  Aligned_cols=97  Identities=14%  Similarity=0.052  Sum_probs=75.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh---cCCCceeEEEECCCccccCCccccccccccCcCCCcEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI---DGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L---dp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~I  227 (276)
                      ....||+.++|+.+.+. +.++|+|+++....+.+++..   +..++|...+....+...+...|.+-++.+|.++++++
T Consensus        94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~l  173 (220)
T TIGR01691        94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREIL  173 (220)
T ss_pred             cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence            45899999999999876 999999999999999888876   44456665554332222222378889999999999999


Q ss_pred             EEEcCcccccCCCCCeeeeCc
Q 023829          228 IVDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~  248 (276)
                      +|+|+.........+|+.+.-
T Consensus       174 fVgDs~~Di~AA~~AG~~ti~  194 (220)
T TIGR01691       174 FLSDIINELDAARKAGLHTGQ  194 (220)
T ss_pred             EEeCCHHHHHHHHHcCCEEEE
Confidence            999999888777778886543

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.83  E-value=0.00014  Score=66.95  Aligned_cols=102  Identities=15%  Similarity=0.126  Sum_probs=74.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc---------------ccccccc
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLS  217 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~---------------~~~KdL~  217 (276)
                      .-|.+-+-|..|++. .-+++||.|.+++|..-+++++..++|..++.+.+-......               .++.|..
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~  222 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVT  222 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCC
Confidence            347888999999988 589999999999999999999999999999986653221111               1233333


Q ss_pred             c---c--------------CcC-CCcEEEEEcCcccccCCCCCeeeeCccCCCCCCCh
Q 023829          218 C---L--------------SKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN  257 (276)
Q Consensus       218 ~---L--------------~rd-~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~  257 (276)
                      .   |              |.+ .+.+-+|||-+.+ ..+-+|-+.|.... ...+|-
T Consensus       223 ~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~N-n~~YD~FVnvkrcp-~P~~DW  278 (297)
T PF05152_consen  223 NVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSN-NYSYDYFVNVKRCP-VPVNDW  278 (297)
T ss_pred             cCCCCCCCCeehHHHHHHcCCceeeeEEEeccCccc-CccceeEEEeccCC-CCchHH
Confidence            3   2              333 3557899999887 46778999999985 344454

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.83  E-value=1.8e-05  Score=69.58  Aligned_cols=91  Identities=13%  Similarity=0.161  Sum_probs=63.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC--ccc-----cCCc--cccccccccCcC
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS--TTS-----TEYR--EHVKDLSCLSKD  222 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~--c~~-----~k~~--~~~KdL~~L~rd  222 (276)
                      +..+||+.+|++.+.+.+.++|.|++...+++++++.++...+|..++--++  ...     .+.+  ..++.+...+  
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~--  144 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY--  144 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC--
Confidence            3589999999999998889999999999999999999998877765433222  100     1111  2344443333  


Q ss_pred             CCcEEEEEcCcccccCCCCCeee
Q 023829          223 LCRTLIVDNNPFSFLLQPLNGIP  245 (276)
Q Consensus       223 ~~~~IiVDDsp~~~~~~p~NgI~  245 (276)
                       .+++.|-|+..-.......|+.
T Consensus       145 -~~~v~vGDs~nDl~ml~~Ag~~  166 (203)
T TIGR02137       145 -YRVIAAGDSYNDTTMLSEAHAG  166 (203)
T ss_pred             -CCEEEEeCCHHHHHHHHhCCCC
Confidence             3799999999865444334433

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=97.83  E-value=2.9e-05  Score=73.12  Aligned_cols=95  Identities=15%  Similarity=0.224  Sum_probs=69.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEE-----------ECCCccccCCc--ccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRL-----------YRPSTTSTEYR--EHVKDLS  217 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl-----------~r~~c~~~k~~--~~~KdL~  217 (276)
                      +.++||+.++|+.|.+. +.++|.|++...+++.+.+.++....+...+           ..+ +...+.+  .+.+-++
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-iv~~k~K~~~L~~la~  258 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-IVDAQYKADTLTRLAQ  258 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-cCCcccHHHHHHHHHH
Confidence            45899999999999988 9999999999999999999987765443222           111 1111111  2334446


Q ss_pred             ccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          218 CLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       218 ~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      .+|.++++||.|-|+..-...-...|+.|-
T Consensus       259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA  288 (322)
T PRK11133        259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA  288 (322)
T ss_pred             HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            788999999999999988776666676654

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.83  E-value=2e-05  Score=68.78  Aligned_cols=94  Identities=16%  Similarity=0.066  Sum_probs=83.2

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +..-|++.++|+.+...|+++|.|++...++...++.+....+|..+++.++.+..|+.  .|..-++++|.+++++++|
T Consensus        98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~V  177 (229)
T COG1011          98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFV  177 (229)
T ss_pred             CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEE
Confidence            56789999999999988999999999999999999999988899999999998877765  6889999999999999999


Q ss_pred             EcCcccc-cCCCCCeee
Q 023829          230 DNNPFSF-LLQPLNGIP  245 (276)
Q Consensus       230 DDsp~~~-~~~p~NgI~  245 (276)
                      ||+...- .....-|+.
T Consensus       178 gD~~~~di~gA~~~G~~  194 (229)
T COG1011         178 GDSLENDILGARALGMK  194 (229)
T ss_pred             CCChhhhhHHHHhcCcE
Confidence            9999987 555555665

>PLN02811 hydrolase

Probab=97.81  E-value=2.2e-05  Score=69.16  Aligned_cols=99  Identities=9%  Similarity=0.038  Sum_probs=77.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHH-HHHHhcCCCceeEEEECC--CccccCCc--cccccccccC---cC
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARP-LVDRIDGENLFSLRLYRP--STTSTEYR--EHVKDLSCLS---KD  222 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~-vl~~Ldp~~~f~~rl~r~--~c~~~k~~--~~~KdL~~L~---rd  222 (276)
                      ....||+.++|+.|++. +.++|.|++.+.+... ..+......+|..+++.+  ++...|+.  .|.+-++.++   .+
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  156 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD  156 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence            34689999999999987 9999999998876554 333334456888899888  66555544  6778888886   88


Q ss_pred             CCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          223 LCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       223 ~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +++||+|+|+...+.....+|+.+.-..
T Consensus       157 ~~~~v~IgDs~~di~aA~~aG~~~i~v~  184 (220)
T PLN02811        157 PGKVLVFEDAPSGVEAAKNAGMSVVMVP  184 (220)
T ss_pred             ccceEEEeccHhhHHHHHHCCCeEEEEe
Confidence            9999999999999888888888777664

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=97.57  E-value=0.0002  Score=60.05  Aligned_cols=84  Identities=23%  Similarity=0.375  Sum_probs=58.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC------------ccccCC-cccccc-c
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS------------TTSTEY-REHVKD-L  216 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~------------c~~~k~-~~~~Kd-L  216 (276)
                      +..+||+.++++.+.+. +.++|.|++...+++++++.++...+|...+.-+.            |..... ...++. +
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~  151 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL  151 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence            44789999999999877 99999999999999999999987777665544321            100000 011222 2


Q ss_pred             cccCcCCCcEEEEEcCccc
Q 023829          217 SCLSKDLCRTLIVDNNPFS  235 (276)
Q Consensus       217 ~~L~rd~~~~IiVDDsp~~  235 (276)
                      +..+.+.++++.|-|+..-
T Consensus       152 ~~~~~~~~~~~~iGDs~~D  170 (177)
T TIGR01488       152 EESKITLKKIIAVGDSVND  170 (177)
T ss_pred             HHhCCCHHHEEEEeCCHHH
Confidence            3345567888999888654

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.53  E-value=0.00017  Score=64.54  Aligned_cols=78  Identities=5%  Similarity=-0.007  Sum_probs=56.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHH--HHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR--PLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~--~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      .-||+.++|+.|.+. +.++|.|++.+..++  ..++.++... .|..+++......   .....-++.++.+.+++++|
T Consensus        25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~---~~l~~~~~~~~~~~~~~~~v  101 (242)
T TIGR01459        25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV---QMILESKKRFDIRNGIIYLL  101 (242)
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH---HHHHhhhhhccCCCceEEEe
Confidence            479999999999987 999999999988776  6778888776 7888877665322   11222234455566778887


Q ss_pred             EcCcc
Q 023829          230 DNNPF  234 (276)
Q Consensus       230 DDsp~  234 (276)
                      -|+..
T Consensus       102 Gd~~~  106 (242)
T TIGR01459       102 GHLEN  106 (242)
T ss_pred             CCccc
Confidence            77654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.45  E-value=5.3e-05  Score=65.32  Aligned_cols=78  Identities=9%  Similarity=0.089  Sum_probs=57.4

Q ss_pred             HHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCC
Q 023829          162 LKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQP  240 (276)
Q Consensus       162 L~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p  240 (276)
                      ++.+.+. ++++|.|+.....+..+++.+....+|..       ...+...+.+-++.+|.+++++++|-|+..-.....
T Consensus        57 i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g-------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~  129 (183)
T PRK09484         57 IRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG-------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVME  129 (183)
T ss_pred             HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC-------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence            4445544 99999999999999999999887666641       112223556667788999999999999988776655


Q ss_pred             CCeeee
Q 023829          241 LNGIPC  246 (276)
Q Consensus       241 ~NgI~V  246 (276)
                      ..|+.+
T Consensus       130 ~aG~~~  135 (183)
T PRK09484        130 KVGLSV  135 (183)
T ss_pred             HCCCeE
Confidence            556654

>PRK08238 hypothetical protein; Validated

Probab=97.44  E-value=0.00039  Score=68.86  Aligned_cols=79  Identities=14%  Similarity=0.060  Sum_probs=55.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc-cccccccccCcCCCcEEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR-EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~-~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..+||+.++++.+++. ++++|.|++.+.+++++++.++.   |+.++..+.....+.. .-.+-.+.++  .++++++-
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yvG  146 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYAG  146 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEec
Confidence            3789999999999877 99999999999999999999864   7888877654333211 1111112223  35577788


Q ss_pred             cCcccc
Q 023829          231 NNPFSF  236 (276)
Q Consensus       231 Dsp~~~  236 (276)
                      |+..-.
T Consensus       147 DS~~Dl  152 (479)
T PRK08238        147 NSAADL  152 (479)
T ss_pred             CCHHHH
Confidence            877543

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=97.43  E-value=3.8e-05  Score=64.65  Aligned_cols=79  Identities=8%  Similarity=0.012  Sum_probs=68.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +..+||+.++|+.      ++|.|++.+.+.+.+++++....+|..+++.+++...|+.  .|.+-++++|.++++|++|
T Consensus        89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v  162 (175)
T TIGR01493        89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV  162 (175)
T ss_pred             CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence            4589999999993      7899999999999999999888899988888877666654  6888999999999999999


Q ss_pred             EcCcccc
Q 023829          230 DNNPFSF  236 (276)
Q Consensus       230 DDsp~~~  236 (276)
                      +|++...
T Consensus       163 gD~~~Di  169 (175)
T TIGR01493       163 AAHQWDL  169 (175)
T ss_pred             ecChhhH
Confidence            9997543

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=97.32  E-value=0.0004  Score=64.14  Aligned_cols=86  Identities=13%  Similarity=0.205  Sum_probs=60.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC----CceeEEEE-C-CCccccCCcc----ccc------
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE----NLFSLRLY-R-PSTTSTEYRE----HVK------  214 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~----~~f~~rl~-r-~~c~~~k~~~----~~K------  214 (276)
                      +.+|||+.+|++.|.++ ..++|+|+|...+++.+++.++..    ..++.++- . +.+.....+.    +.|      
T Consensus       120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~  199 (277)
T TIGR01544       120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL  199 (277)
T ss_pred             CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence            67999999999999887 999999999999999999987653    23344432 2 2222122221    222      


Q ss_pred             -cccccC--cCCCcEEEEEcCccccc
Q 023829          215 -DLSCLS--KDLCRTLIVDNNPFSFL  237 (276)
Q Consensus       215 -dL~~L~--rd~~~~IiVDDsp~~~~  237 (276)
                       ..+.++  .+.++||+|.|+..-..
T Consensus       200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~  225 (277)
T TIGR01544       200 RNTEYFNQLKDRSNIILLGDSQGDLR  225 (277)
T ss_pred             HHHHHhCccCCcceEEEECcChhhhh
Confidence             223345  68899999999998654

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.27  E-value=0.00035  Score=62.00  Aligned_cols=87  Identities=14%  Similarity=0.187  Sum_probs=65.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC-----------ccccCCcc-ccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS-----------TTSTEYRE-HVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~-----------c~~~k~~~-~~KdL~~  218 (276)
                      ..++||+.+.++++++. ++++|.|+|-..+++++.+.+.....+..++..++           |....... ...-++.
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~  155 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE  155 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence            67899999999999998 99999999999999999999998877766665554           21100001 1122344


Q ss_pred             cCcCCCcEEEEEcCcccccC
Q 023829          219 LSKDLCRTLIVDNNPFSFLL  238 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~  238 (276)
                      +|.++++++.+=|+..-...
T Consensus       156 ~g~~~~~~~a~gDs~nDlpm  175 (212)
T COG0560         156 LGIPLEETVAYGDSANDLPM  175 (212)
T ss_pred             cCCCHHHeEEEcCchhhHHH
Confidence            68889999999999876644

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.25  E-value=0.0012  Score=60.56  Aligned_cols=80  Identities=14%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc----eeEEEECCCccccCCccccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL----FSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~----f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~  226 (276)
                      ...-||+.+||+++.+. ..+++.|+....+.+...+.|...++    +..++.++.- ..|.. -.+.   +...-.=+
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-~~K~~-rr~~---I~~~y~Iv  191 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-SSKES-RRQK---VQKDYEIV  191 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-CCcHH-HHHH---HHhcCCEE
Confidence            33689999999999887 89999999987777755555544432    4677777642 22211 1111   11111116


Q ss_pred             EEEEcCcccc
Q 023829          227 LIVDNNPFSF  236 (276)
Q Consensus       227 IiVDDsp~~~  236 (276)
                      +.|.|+..-+
T Consensus       192 l~vGD~~~Df  201 (266)
T TIGR01533       192 LLFGDNLLDF  201 (266)
T ss_pred             EEECCCHHHh
Confidence            7788776655

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=97.23  E-value=0.00019  Score=64.19  Aligned_cols=91  Identities=14%  Similarity=0.031  Sum_probs=72.2

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +..-||+.++|+.|++.|.++|.|++...     ++..+..++|..++..+.....|+.  .|.+-++.+|.++++||+|
T Consensus       112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V  186 (238)
T PRK10748        112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV  186 (238)
T ss_pred             CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence            34569999999999988999999998875     3556667789999888776655554  6778888999999999999


Q ss_pred             EcCc-ccccCCCCCeeeeC
Q 023829          230 DNNP-FSFLLQPLNGIPCI  247 (276)
Q Consensus       230 DDsp-~~~~~~p~NgI~V~  247 (276)
                      .|++ .-+.....+|+.+.
T Consensus       187 GD~~~~Di~~A~~aG~~~i  205 (238)
T PRK10748        187 GDDLTTDVAGAIRCGMQAC  205 (238)
T ss_pred             cCCcHHHHHHHHHCCCeEE
Confidence            9995 66666666777654

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.19  E-value=0.0014  Score=55.48  Aligned_cols=84  Identities=14%  Similarity=0.100  Sum_probs=43.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch-------hhHHHHHHHh----cCCCceeEEEE-CCCccccCCc--cccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLE-------GYARPLVDRI----DGENLFSLRLY-RPSTTSTEYR--EHVKDL  216 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~-------~yA~~vl~~L----dp~~~f~~rl~-r~~c~~~k~~--~~~KdL  216 (276)
                      ...-|++-+-|+.+.+. |.|+|+|+..-       .-.+.+.+++    ..-+....+++ .+.....|++  .+..-+
T Consensus        28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~  107 (159)
T PF08645_consen   28 KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFAL  107 (159)
T ss_dssp             EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred             hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHH
Confidence            44667899999999987 99999998621       2222222222    12232222222 2222233333  333333


Q ss_pred             ccc----CcCCCcEEEEEcCccc
Q 023829          217 SCL----SKDLCRTLIVDNNPFS  235 (276)
Q Consensus       217 ~~L----~rd~~~~IiVDDsp~~  235 (276)
                      +.+    ..|.++.++|=|+...
T Consensus       108 ~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen  108 KDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             CCTSTT--S-CCC-EEEESSCHC
T ss_pred             HhccccccccccceEEEeccCCC
Confidence            333    3588999999987654

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PTZ00445 p36-lilke protein; Provisional

Probab=97.09  E-value=0.00032  Score=62.24  Aligned_cols=134  Identities=10%  Similarity=0.037  Sum_probs=84.2

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023829           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-  168 (276)
Q Consensus        90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-  168 (276)
                      +..+-+.|++|||.|||.. ++.   .+.+..                   .+    ...+.-..+|.+.++++.|.+. 
T Consensus        39 ~~~GIk~Va~D~DnTlI~~-Hsg---G~~~~~-------------------~~----~~~~~~~~tpefk~~~~~l~~~~   91 (219)
T PTZ00445         39 NECGIKVIASDFDLTMITK-HSG---GYIDPD-------------------ND----DIRVLTSVTPDFKILGKRLKNSN   91 (219)
T ss_pred             HHcCCeEEEecchhhhhhh-hcc---cccCCC-------------------cc----hhhhhccCCHHHHHHHHHHHHCC
Confidence            4457899999999999952 110   000000                   00    0122344899999999999976 


Q ss_pred             ceEEEEccCchhh-----------HHHHHHHhcC-CC---ceeEEE------ECCC-----ccccCCc--c--c--cccc
Q 023829          169 ADLILFTAGLEGY-----------ARPLVDRIDG-EN---LFSLRL------YRPS-----TTSTEYR--E--H--VKDL  216 (276)
Q Consensus       169 yelvI~Ts~~~~y-----------A~~vl~~Ldp-~~---~f~~rl------~r~~-----c~~~k~~--~--~--~KdL  216 (276)
                      +.|+|.|-+.+..           .+++++..-. .+   .+..++      +.+.     +...|+.  .  |  .+-+
T Consensus        92 I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll  171 (219)
T PTZ00445         92 IKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVC  171 (219)
T ss_pred             CeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHH
Confidence            9999999988855           2333333211 11   122211      2221     1112222  2  4  5566


Q ss_pred             cccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          217 SCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       217 ~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++.|.++++|++|||++.++.....-|+..--|.
T Consensus       172 ~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~  205 (219)
T PTZ00445        172 SDFNVNPDEILFIDDDMNNCKNALKEGYIALHVT  205 (219)
T ss_pred             HHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence            7779999999999999999988888899888886

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=96.96  E-value=0.0018  Score=55.37  Aligned_cols=135  Identities=19%  Similarity=0.162  Sum_probs=91.5

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023829           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-  168 (276)
Q Consensus        90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-  168 (276)
                      ...+.+.+|+|||+|||-=..                                         -..=|-+.+-+..+.+. 
T Consensus        24 ~~~Gikgvi~DlDNTLv~wd~-----------------------------------------~~~tpe~~~W~~e~k~~g   62 (175)
T COG2179          24 KAHGIKGVILDLDNTLVPWDN-----------------------------------------PDATPELRAWLAELKEAG   62 (175)
T ss_pred             HHcCCcEEEEeccCceecccC-----------------------------------------CCCCHHHHHHHHHHHhcC
Confidence            344789999999999995110                                         01357788999999988 


Q ss_pred             ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccc-cCCCCC---ee
Q 023829          169 ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF-LLQPLN---GI  244 (276)
Q Consensus       169 yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~-~~~p~N---gI  244 (276)
                      ..++|.|+.++.-+..+++.||-..+....     -..  ...+.|.|..++-++++|+.|=|.-.-= .....+   .|
T Consensus        63 i~v~vvSNn~e~RV~~~~~~l~v~fi~~A~-----KP~--~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tI  135 (175)
T COG2179          63 IKVVVVSNNKESRVARAAEKLGVPFIYRAK-----KPF--GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTI  135 (175)
T ss_pred             CEEEEEeCCCHHHHHhhhhhcCCceeeccc-----Ccc--HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEE
Confidence            999999999999999999998876443321     110  1257899999999999999999987632 223334   45


Q ss_pred             eeCccCCCCCCChHHhHH--HHHHHHhhhc
Q 023829          245 PCIPFSAGQPHDNQVLTN--VTLLKFLLSS  272 (276)
Q Consensus       245 ~V~~f~~g~~~D~eL~~l--~~~L~~La~~  272 (276)
                      .|.|-...+.--+.+.+.  ..+++.|.+.
T Consensus       136 lV~Pl~~~d~~~t~~nR~~Er~v~~~l~~k  165 (175)
T COG2179         136 LVEPLVAPDGWITKINRWRERRVLKKLGKK  165 (175)
T ss_pred             EEEEeccccchhhhhhHHHHHHHHHHHHHh
Confidence            667765322211222222  3566666554

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.95  E-value=0.002  Score=56.03  Aligned_cols=85  Identities=16%  Similarity=0.202  Sum_probs=60.3

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccC----chhhHHH--------HHHHhcCCC-ceeEEEECCC-----ccccCCc--c
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAG----LEGYARP--------LVDRIDGEN-LFSLRLYRPS-----TTSTEYR--E  211 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~--------vl~~Ldp~~-~f~~rl~r~~-----c~~~k~~--~  211 (276)
                      .+.||+.+=|..+.+. |.+||+|+.    ...+...        +.+.|...+ .|+.++++.|     |...|+.  .
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm  110 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGM  110 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHH
Confidence            3789999999999887 999999992    2233333        444444444 6899999765     4444443  4


Q ss_pred             ccccccccCcCCCcEEEEEcCccccc
Q 023829          212 HVKDLSCLSKDLCRTLIVDNNPFSFL  237 (276)
Q Consensus       212 ~~KdL~~L~rd~~~~IiVDDsp~~~~  237 (276)
                      +..-++..+.|+++.++|=|+..-..
T Consensus       111 ~~~~~~~~~iD~~~s~~VGD~~~Dlq  136 (181)
T COG0241         111 LLSALKEYNIDLSRSYVVGDRLTDLQ  136 (181)
T ss_pred             HHHHHHHhCCCccceEEecCcHHHHH
Confidence            55666777889999999999965443

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.94  E-value=0.0019  Score=50.62  Aligned_cols=40  Identities=18%  Similarity=0.218  Sum_probs=31.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      .=||+.+|++.|.+. ..+++.|+++..-.+.++++|..-|
T Consensus        15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G   55 (101)
T PF13344_consen   15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG   55 (101)
T ss_dssp             E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred             cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence            469999999999987 9999999999877777777775444

...

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.68  E-value=0.0012  Score=56.64  Aligned_cols=117  Identities=13%  Similarity=0.076  Sum_probs=77.6

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhh-cceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSE-FADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~-~yel  171 (276)
                      .-+++|||.||||-+-.-                  +         ...+|..+   .-+..|-|.--.  .|.+ .+.+
T Consensus         6 ~i~~~v~d~dGv~tdg~~------------------~---------~~~~g~~~---~~~~~~D~~~~~--~L~~~Gi~l   53 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRI------------------V---------INDEGIES---RNFDIKDGMGVI--VLQLCGIDV   53 (169)
T ss_pred             cCeEEEEeCceeeECCeE------------------E---------EcCCCcEE---EEEecchHHHHH--HHHHCCCEE
Confidence            468999999999997310                  0         01122211   113355555432  3433 4999


Q ss_pred             EEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCc
Q 023829          172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~  248 (276)
                      +|.|+....+++.+++.+....+|...       ..+...+.+-++.++.++++|+.|-|+..-.......|+.+-.
T Consensus        54 aIiT~k~~~~~~~~l~~lgi~~~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am  123 (169)
T TIGR02726        54 AIITSKKSGAVRHRAEELKIKRFHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV  123 (169)
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC
Confidence            999999999999999999888777642       1223356667777888999999999998775544445544433

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK11590 hypothetical protein; Provisional

Probab=96.64  E-value=0.0033  Score=55.15  Aligned_cols=39  Identities=23%  Similarity=0.123  Sum_probs=34.2

Q ss_pred             EeeCccHHHHH-HHhhh-cceEEEEccCchhhHHHHHHHhc
Q 023829          152 VFERPGLREFL-KQLSE-FADLILFTAGLEGYARPLVDRID  190 (276)
Q Consensus       152 v~~RPgl~eFL-~~l~~-~yelvI~Ts~~~~yA~~vl~~Ld  190 (276)
                      +..+||+.+.| +.+.+ .+.++|.|++...+++++++.+.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~  134 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP  134 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence            34689999999 56875 59999999999999999999876

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.55  E-value=0.0058  Score=55.61  Aligned_cols=59  Identities=27%  Similarity=0.224  Sum_probs=48.1

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      ..+.+++||||||+++..                                          ...|...+.|+.|.+. +.+
T Consensus         3 ~~kli~~DlDGTLl~~~~------------------------------------------~~~~~~~~ai~~l~~~Gi~~   40 (273)
T PRK00192          3 MKLLVFTDLDGTLLDHHT------------------------------------------YSYEPAKPALKALKEKGIPV   40 (273)
T ss_pred             cceEEEEcCcccCcCCCC------------------------------------------cCcHHHHHHHHHHHHCCCEE
Confidence            367899999999997411                                          0346678899999987 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC
Q 023829          172 ILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      +|.|.-....+..+++.++...
T Consensus        41 ~iaTgR~~~~~~~~~~~l~l~~   62 (273)
T PRK00192         41 IPCTSKTAAEVEVLRKELGLED   62 (273)
T ss_pred             EEEcCCCHHHHHHHHHHcCCCC
Confidence            9999999999999999987654

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=96.53  E-value=0.01  Score=48.61  Aligned_cols=49  Identities=6%  Similarity=0.061  Sum_probs=37.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHH------------HHHHHhcCCCc-eeEEEECC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR------------PLVDRIDGENL-FSLRLYRP  202 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~------------~vl~~Ldp~~~-f~~rl~r~  202 (276)
                      ..+.+.+.|+.+.+. ++++++|+-......            .+.+.|+.++. +..++.|.
T Consensus        25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k   87 (126)
T TIGR01689        25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGK   87 (126)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence            678888999998665 999999988887766            77778877763 55555554

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=96.49  E-value=0.0046  Score=54.22  Aligned_cols=93  Identities=13%  Similarity=0.178  Sum_probs=62.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-e--EEEECCCccccCCc--c----------cccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-S--LRLYRPSTTSTEYR--E----------HVKD  215 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~--~rl~r~~c~~~k~~--~----------~~Kd  215 (276)
                      +..|||+.+||+.+.+. +.++|.|++...+++++++.+.....| .  ..+..+.....++.  .          -.+-
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            67999999999999987 999999999999999999998543333 2  22222221111111  0          1233


Q ss_pred             ccccCcCCCcEEEEEcCcccccCCCCCee
Q 023829          216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGI  244 (276)
Q Consensus       216 L~~L~rd~~~~IiVDDsp~~~~~~p~NgI  244 (276)
                      ++.++...+++|.|-|+..-+.....+++
T Consensus       149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            44445567889999999887654444444

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.40  E-value=0.013  Score=50.29  Aligned_cols=96  Identities=16%  Similarity=0.200  Sum_probs=61.6

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023829           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA  169 (276)
Q Consensus        90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y  169 (276)
                      +..+-+.||||+|+||..-+.                                         -..-|.+.+.+++|.+.|
T Consensus        37 k~~Gik~li~DkDNTL~~~~~-----------------------------------------~~i~~~~~~~~~~l~~~~   75 (168)
T PF09419_consen   37 KKKGIKALIFDKDNTLTPPYE-----------------------------------------DEIPPEYAEWLNELKKQF   75 (168)
T ss_pred             hhcCceEEEEcCCCCCCCCCc-----------------------------------------CcCCHHHHHHHHHHHHHC
Confidence            345789999999999985321                                         114577888899999874


Q ss_pred             ---eEEEEccCc-------hhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccC-----cCCCcEEEEEcCcc
Q 023829          170 ---DLILFTAGL-------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLS-----KDLCRTLIVDNNPF  234 (276)
Q Consensus       170 ---elvI~Ts~~-------~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~-----rd~~~~IiVDDsp~  234 (276)
                         .++|+|++.       ..-|+.+-+.+... .+.+.     +  .|++.+.+-++.++     ..++++++|-|.-.
T Consensus        76 ~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl~h~-----~--kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~  147 (168)
T PF09419_consen   76 GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VLRHR-----A--KKPGCFREILKYFKCQKVVTSPSEIAVIGDRLF  147 (168)
T ss_pred             CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EEEeC-----C--CCCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence               399999984       56677777776622 12221     1  12332222223332     35899999999865

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=96.33  E-value=0.0038  Score=61.38  Aligned_cols=92  Identities=16%  Similarity=0.152  Sum_probs=61.2

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeE-EEECCCcccc-CCccccccccccCcCCCcEEEEEcCcc
Q 023829          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSL-RLYRPSTTST-EYREHVKDLSCLSKDLCRTLIVDNNPF  234 (276)
Q Consensus       158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~-rl~r~~c~~~-k~~~~~KdL~~L~rd~~~~IiVDDsp~  234 (276)
                      +++|...+.+. +=+.|-|-....-|+.+.++ -|+=.+.. -+..-+|-.. |-....|-.++||-..+..|++||+|.
T Consensus       260 fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~k-hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~  338 (574)
T COG3882         260 FQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK-HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPA  338 (574)
T ss_pred             HHHHHHHHHhccEEEEEecCCchhhHHHHHhh-CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHH
Confidence            56777778777 78899999999999988886 22211110 0111122221 112567888889999999999999999


Q ss_pred             cccCCCCCe-eeeCccC
Q 023829          235 SFLLQPLNG-IPCIPFS  250 (276)
Q Consensus       235 ~~~~~p~Ng-I~V~~f~  250 (276)
                      ....-..++ +.|.+|.
T Consensus       339 ErE~vk~~~~v~Vi~~~  355 (574)
T COG3882         339 ERELVKRELPVSVIEFP  355 (574)
T ss_pred             HHHHHHhcCceeeccCC
Confidence            876544443 7777774

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.30  E-value=0.01  Score=53.34  Aligned_cols=59  Identities=22%  Similarity=0.237  Sum_probs=48.3

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      ..+.|++||||||+.+.+.                                          ..|...+.|+.+.+. +.+
T Consensus         2 ~~kli~~DlDGTLl~~~~~------------------------------------------i~~~~~~al~~~~~~g~~v   39 (264)
T COG0561           2 MIKLLAFDLDGTLLDSNKT------------------------------------------ISPETKEALARLREKGVKV   39 (264)
T ss_pred             CeeEEEEcCCCCccCCCCc------------------------------------------cCHHHHHHHHHHHHCCCEE
Confidence            3688999999999985321                                          466777888888766 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC
Q 023829          172 ILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      +|.|.-....+.++++.|...+
T Consensus        40 ~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          40 VLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             EEECCCChHHHHHHHHHcCCCc
Confidence            9999999999999999998876

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=96.26  E-value=0.0011  Score=57.21  Aligned_cols=82  Identities=22%  Similarity=0.367  Sum_probs=48.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHHHHHHHhcCC--Cc-eeEEEECCCccccCCccccccccccCcCC
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGE--NL-FSLRLYRPSTTSTEYREHVKDLSCLSKDL  223 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~----yA~~vl~~Ldp~--~~-f~~rl~r~~c~~~k~~~~~KdL~~L~rd~  223 (276)
                      ...-||+.|.|+.|.+. +++++.|+....    .++.-.+.|+..  +. +..+++..+          |.  .++.| 
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~----------K~--~v~~D-  138 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD----------KT--LVGGD-  138 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS----------GG--GC--S-
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC----------CC--eEecc-
Confidence            45779999999999998 588888877665    345555555544  22 223333221          11  23434 


Q ss_pred             CcEEEEEcCcccccCCCCCeeeeCcc
Q 023829          224 CRTLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       224 ~~~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                         |+|||++.........|+++.=|
T Consensus       139 ---vlIDD~~~n~~~~~~~g~~~iLf  161 (191)
T PF06941_consen  139 ---VLIDDRPHNLEQFANAGIPVILF  161 (191)
T ss_dssp             ---EEEESSSHHHSS-SSESSEEEEE
T ss_pred             ---EEecCChHHHHhccCCCceEEEE
Confidence               89999999987777777555444

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.05  E-value=0.016  Score=50.50  Aligned_cols=39  Identities=18%  Similarity=0.141  Sum_probs=31.1

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      -|...+-|+.+.+. +.++|.|.-....++.+.+.++...
T Consensus        20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~   59 (215)
T TIGR01487        20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG   59 (215)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence            45666778888877 8899999888888888888887664

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10444 UMP phosphatase; Provisional

Probab=96.02  E-value=0.014  Score=52.87  Aligned_cols=40  Identities=25%  Similarity=0.367  Sum_probs=32.6

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      .=||..++++.|.+. ..+++.|+....-.+.++++|..-|
T Consensus        18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G   58 (248)
T PRK10444         18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAG   58 (248)
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence            358899999999976 8899999999888888888875433

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=95.91  E-value=0.041  Score=48.04  Aligned_cols=43  Identities=26%  Similarity=0.590  Sum_probs=39.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL  194 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~  194 (276)
                      +..|||.++|.+++.++ ..++|.|+|+.-|.+++++.+--+..
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~  115 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKER  115 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccc
Confidence            66899999999999998 99999999999999999999865443

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=95.90  E-value=0.028  Score=50.55  Aligned_cols=37  Identities=11%  Similarity=0.162  Sum_probs=29.1

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      |...+-|+.+.+. +.++|.|.-....+..+++.+...
T Consensus        23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (270)
T PRK10513         23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME   60 (270)
T ss_pred             HHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence            3345677888877 889999988888888899888754

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=95.88  E-value=0.023  Score=49.74  Aligned_cols=38  Identities=18%  Similarity=0.209  Sum_probs=24.4

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      |...+-|+.+.+. ..++|.|.-....+.++++.+....
T Consensus        23 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (230)
T PRK01158         23 LKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG   61 (230)
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence            4445556666655 6777777777777777777766543

>PLN02645 phosphoglycolate phosphatase

Probab=95.75  E-value=0.02  Score=53.44  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=30.8

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      ||+.++|+.|.+. ..+++.|+......+.++++|..-
T Consensus        47 ~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l   84 (311)
T PLN02645         47 EGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL   84 (311)
T ss_pred             cCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC
Confidence            8999999999976 999999999977777777666443

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=95.75  E-value=0.023  Score=50.56  Aligned_cols=37  Identities=14%  Similarity=0.201  Sum_probs=31.0

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      |...++|+++.+. ..+++.|.-+...+..+++.++..
T Consensus        18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~   55 (225)
T TIGR02461        18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE   55 (225)
T ss_pred             hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            4578899999987 999999988888888888888754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=95.68  E-value=0.025  Score=49.08  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=27.7

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      -|...+.|+.+.+. ..+++.|.-....+..+++.+...
T Consensus        17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen   17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             CHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            34556777777755 888888888888888888876544

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=95.58  E-value=0.028  Score=50.35  Aligned_cols=37  Identities=19%  Similarity=0.254  Sum_probs=25.5

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      |...+.|+++.+. +.++|.|......+..+++.+...
T Consensus        19 ~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        19 PSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            4455667777766 777777777777777777776554

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.56  E-value=0.031  Score=48.82  Aligned_cols=35  Identities=20%  Similarity=0.165  Sum_probs=30.7

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      ..+.|+.+.+. ..+++.|......++.+++.+...
T Consensus        21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            56888888877 899999999999999999998754

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=95.56  E-value=0.046  Score=49.37  Aligned_cols=54  Identities=20%  Similarity=0.325  Sum_probs=45.6

Q ss_pred             EeeCccHHHHHHHhhh---cceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcc
Q 023829          152 VFERPGLREFLKQLSE---FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT  205 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~---~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~  205 (276)
                      +..-||..+|++++++   .++++|-|.|..-|.+.+++.-+..+.|+.+++...+.
T Consensus        70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~  126 (234)
T PF06888_consen   70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACF  126 (234)
T ss_pred             CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCcee
Confidence            4489999999999954   49999999999999999999998888777776655443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.56  E-value=0.024  Score=51.49  Aligned_cols=37  Identities=22%  Similarity=0.342  Sum_probs=27.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID  190 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld  190 (276)
                      .=||..++++.|.+. ..+++.|+.+..-.+.+.+++.
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~   59 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQ   59 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHH
Confidence            357999999999987 9999999876665445555443

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=95.53  E-value=0.032  Score=50.46  Aligned_cols=15  Identities=27%  Similarity=0.388  Sum_probs=13.1

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      .+++++||||||+.+
T Consensus         2 ~kli~~DlDGTLl~~   16 (272)
T PRK15126          2 ARLAAFDMDGTLLMP   16 (272)
T ss_pred             ccEEEEeCCCcCcCC
Confidence            468999999999975

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=95.47  E-value=0.04  Score=49.39  Aligned_cols=15  Identities=40%  Similarity=0.525  Sum_probs=13.2

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      .+++++||||||++.
T Consensus         3 ~kli~~DlDGTLl~~   17 (272)
T PRK10530          3 YRVIALDLDGTLLTP   17 (272)
T ss_pred             ccEEEEeCCCceECC
Confidence            578999999999975

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=95.42  E-value=0.031  Score=49.26  Aligned_cols=37  Identities=22%  Similarity=0.124  Sum_probs=32.9

Q ss_pred             eeCccHHHHHH-Hhhh-cceEEEEccCchhhHHHHHHHh
Q 023829          153 FERPGLREFLK-QLSE-FADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       153 ~~RPgl~eFL~-~l~~-~yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      ..+||+.+.|+ .+.+ -+.++|.|++...+++++++..
T Consensus        94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~  132 (210)
T TIGR01545        94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS  132 (210)
T ss_pred             CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence            47999999995 7885 5999999999999999999773

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.39  E-value=0.037  Score=50.66  Aligned_cols=36  Identities=17%  Similarity=0.201  Sum_probs=26.1

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      .-||+.++|++|.+. ..+++.|+.+..-...+++++
T Consensus        19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l   55 (279)
T TIGR01452        19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF   55 (279)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            357899999999976 889999986654444444444

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.38  E-value=0.04  Score=50.06  Aligned_cols=58  Identities=22%  Similarity=0.224  Sum_probs=42.2

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      .++.+++||||||++..+  ..                                        -|-..+-|+++.+. ..+
T Consensus         6 ~~~lI~~DlDGTLL~~~~--~i----------------------------------------~~~~~~ai~~l~~~Gi~~   43 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSHT--YD----------------------------------------WQPAAPWLTRLREAQVPV   43 (271)
T ss_pred             CCeEEEEeCccCCcCCCC--cC----------------------------------------cHHHHHHHHHHHHcCCeE
Confidence            478999999999997421  11                                        12244557777766 888


Q ss_pred             EEEccCchhhHHHHHHHhcCC
Q 023829          172 ILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      +|.|.-....+.++++.++..
T Consensus        44 viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         44 ILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             EEEcCCCHHHHHHHHHHhCCC
Confidence            888888888888888888654

>PRK10976 putative hydrolase; Provisional

Probab=95.35  E-value=0.041  Score=49.47  Aligned_cols=15  Identities=40%  Similarity=0.423  Sum_probs=13.1

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      .+++++||||||+++
T Consensus         2 ikli~~DlDGTLl~~   16 (266)
T PRK10976          2 YQVVASDLDGTLLSP   16 (266)
T ss_pred             ceEEEEeCCCCCcCC
Confidence            368999999999975

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.23  E-value=0.045  Score=51.15  Aligned_cols=36  Identities=19%  Similarity=0.241  Sum_probs=29.8

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      ..+-|+.|.+. ..+++.|+-+..-+..+.+.+....
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~   59 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH   59 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            56678888877 9999999998888888999887654

>smart00775 LNS2 LNS2 domain

Probab=95.21  E-value=0.046  Score=46.12  Aligned_cols=36  Identities=19%  Similarity=0.404  Sum_probs=28.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHH---HHHHHh
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR---PLVDRI  189 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~---~vl~~L  189 (276)
                      ..|++.++++.+.+. |.+++.|+.....+.   ..++.+
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~   67 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI   67 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence            479999999999988 888888888777664   566554

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=94.99  E-value=0.039  Score=51.75  Aligned_cols=35  Identities=20%  Similarity=0.277  Sum_probs=22.1

Q ss_pred             CccHHHHHHHhhh-----cceEEEEccCc----hhhHHHHHHHh
Q 023829          155 RPGLREFLKQLSE-----FADLILFTAGL----EGYARPLVDRI  189 (276)
Q Consensus       155 RPgl~eFL~~l~~-----~yelvI~Ts~~----~~yA~~vl~~L  189 (276)
                      -||+.++++.|..     ...+++.|+..    +.+++.+.+.+
T Consensus        18 i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l   61 (321)
T TIGR01456        18 IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL   61 (321)
T ss_pred             cHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence            5777777777775     57777777665    34455443443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=94.93  E-value=0.058  Score=48.65  Aligned_cols=35  Identities=11%  Similarity=0.235  Sum_probs=23.3

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      =|+..++|+.|.+. ..+++.|+++..-.+.+.+.+
T Consensus        19 i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l   54 (249)
T TIGR01457        19 IPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML   54 (249)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            36788999999877 888888874433333344433

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=94.87  E-value=0.022  Score=48.83  Aligned_cols=91  Identities=18%  Similarity=0.178  Sum_probs=63.0

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEEC-CC-ccccC---------Cc--cccccccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-PS-TTSTE---------YR--EHVKDLSC  218 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r-~~-c~~~k---------~~--~~~KdL~~  218 (276)
                      ..+||+.++|+.+.+. +.++|.|++...+++++++.++...+|..++.. ++ ....+         .+  ....-++.
T Consensus        87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~  166 (202)
T TIGR01490        87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAE  166 (202)
T ss_pred             hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHH
Confidence            4799999999999876 999999999999999999999888777654332 11 11100         00  01122234


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCe
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNG  243 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~Ng  243 (276)
                      .+.++++++.+-|++.-...-...|
T Consensus       167 ~~~~~~~~~~~gDs~~D~~~~~~a~  191 (202)
T TIGR01490       167 EQIDLKDSYAYGDSISDLPLLSLVG  191 (202)
T ss_pred             cCCCHHHcEeeeCCcccHHHHHhCC
Confidence            4667889999999987765443333

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.81  E-value=0.013  Score=52.97  Aligned_cols=94  Identities=12%  Similarity=-0.008  Sum_probs=73.5

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEEc
Q 023829          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      =.+..++|+.+++. +.|+|.|+...++= .++..++...+|++++..-..+..|+.  .|.+.|++++..++.||.|||
T Consensus       115 ~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD  193 (237)
T KOG3085|consen  115 LDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGD  193 (237)
T ss_pred             ccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecC
Confidence            34455999999988 89999999998876 777777877899988765555555554  789999999999999999999


Q ss_pred             Cccc-ccCCCCCeeeeCcc
Q 023829          232 NPFS-FLLQPLNGIPCIPF  249 (276)
Q Consensus       232 sp~~-~~~~p~NgI~V~~f  249 (276)
                      +..+ +.....-|+.-.-+
T Consensus       194 ~l~nD~~gA~~~G~~ailv  212 (237)
T KOG3085|consen  194 LLENDYEGARNLGWHAILV  212 (237)
T ss_pred             ccccccHhHHHcCCEEEEE
Confidence            9998 65555445544444

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=94.76  E-value=0.056  Score=48.54  Aligned_cols=36  Identities=22%  Similarity=0.212  Sum_probs=30.5

Q ss_pred             cHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          157 GLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       157 gl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      ...+.++.+.+. ..+++.|.-....+..+++.++..
T Consensus        20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486        20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            467889999887 899999988889899999988753

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=94.69  E-value=0.067  Score=46.54  Aligned_cols=33  Identities=21%  Similarity=0.295  Sum_probs=19.6

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023829          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRID  190 (276)
Q Consensus       158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld  190 (276)
                      ..+-|+.+.+. ..+++.|.-....+..+++.+.
T Consensus        20 ~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~   53 (225)
T TIGR01482        20 ALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG   53 (225)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence            34445555555 6666666666666666666665

catalyze the same reaction as SPP.

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=94.66  E-value=0.11  Score=43.71  Aligned_cols=83  Identities=14%  Similarity=0.184  Sum_probs=54.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhh--HHHHHHHhcCCC-ce--eEEEECCCccccCCccccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGY--ARPLVDRIDGEN-LF--SLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~y--A~~vl~~Ldp~~-~f--~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~  226 (276)
                      ...-||+++-++.|-++|+++|.|+++..+  .+.-.+.|--.- ++  +.+++|..          |++-      +-=
T Consensus        67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn----------Kniv------kaD  130 (180)
T COG4502          67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN----------KNIV------KAD  130 (180)
T ss_pred             cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC----------CCeE------Eee
Confidence            346799999999999999999999995443  444444442211 11  23333322          1111      123


Q ss_pred             EEEEcCcccccCCCCCeeeeCccC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++|||.|.......+|-|.-..-+
T Consensus       131 ilIDDnp~nLE~F~G~kIlFdA~H  154 (180)
T COG4502         131 ILIDDNPLNLENFKGNKILFDAHH  154 (180)
T ss_pred             EEecCCchhhhhccCceEEEeccc
Confidence            799999999988888988877765

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=94.44  E-value=0.075  Score=48.98  Aligned_cols=38  Identities=24%  Similarity=0.317  Sum_probs=33.1

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG  191 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp  191 (276)
                      .=||+.+||+.|.+. -.+++.|+++....+.+.++|..
T Consensus        25 ~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~   63 (269)
T COG0647          25 AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS   63 (269)
T ss_pred             cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence            469999999999988 99999999999888877777755

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=94.38  E-value=0.081  Score=45.50  Aligned_cols=37  Identities=22%  Similarity=0.263  Sum_probs=30.8

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID  190 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld  190 (276)
                      ..|.+.+.|+.|.+. ..++|.|......+..+++.++
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~   55 (204)
T TIGR01484        18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP   55 (204)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence            356778888999887 8999999999999999988743

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=94.34  E-value=0.075  Score=47.49  Aligned_cols=35  Identities=17%  Similarity=0.303  Sum_probs=25.2

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      =|++.++++.+.+. +.+++.|+++..-...+.++|
T Consensus        16 ~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l   51 (236)
T TIGR01460        16 IPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL   51 (236)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence            46889999999877 999999877654444444443

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PTZ00174 phosphomannomutase; Provisional

Probab=94.01  E-value=0.13  Score=46.18  Aligned_cols=15  Identities=33%  Similarity=0.474  Sum_probs=13.5

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      .+.+++||||||+++
T Consensus         5 ~klia~DlDGTLL~~   19 (247)
T PTZ00174          5 KTILLFDVDGTLTKP   19 (247)
T ss_pred             CeEEEEECcCCCcCC
Confidence            578999999999985

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=93.95  E-value=0.016  Score=51.81  Aligned_cols=54  Identities=17%  Similarity=0.329  Sum_probs=45.7

Q ss_pred             eCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc
Q 023829          154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST  207 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~  207 (276)
                      .-||+-+.++.+++.  ||++|.|.+..-+.+.++++.+...+|+.+++...|...
T Consensus        85 ~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da  140 (256)
T KOG3120|consen   85 IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA  140 (256)
T ss_pred             CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC
Confidence            679999999999987  899999999999999999998877777766666665443

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=93.18  E-value=0.31  Score=50.40  Aligned_cols=60  Identities=20%  Similarity=0.168  Sum_probs=44.0

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-c
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A  169 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-y  169 (276)
                      ...++.+++||||||++....                                        +.  +-..+-|+.+.+. .
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~~----------------------------------------i~--~~t~eAL~~L~ekGI  450 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLTY----------------------------------------SY--STALDALRLLKDKEL  450 (694)
T ss_pred             CceeeEEEEECcCCCcCCCCc----------------------------------------cC--HHHHHHHHHHHHcCC
Confidence            346789999999999985210                                        00  1234567777776 8


Q ss_pred             eEEEEccCchhhHHHHHHHhcCC
Q 023829          170 DLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       170 elvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      .+++.|.-....+..+++.++..
T Consensus       451 ~~VIATGRs~~~i~~l~~~Lgl~  473 (694)
T PRK14502        451 PLVFCSAKTMGEQDLYRNELGIK  473 (694)
T ss_pred             eEEEEeCCCHHHHHHHHHHcCCC
Confidence            89999999888888898888754

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=92.87  E-value=0.18  Score=45.87  Aligned_cols=100  Identities=14%  Similarity=0.102  Sum_probs=66.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEEECCC-----------cc---ccCCc-----
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRLYRPS-----------TT---STEYR-----  210 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~-f~~rl~r~~-----------c~---~~k~~-----  210 (276)
                      ...=|.+.++++.+++. ..++..|+..+.+...-++.|-..|+ |+...++++           +.   ....|     
T Consensus        80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~  159 (252)
T PF11019_consen   80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG  159 (252)
T ss_pred             EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence            34678999999999976 99999999999999998888754432 222211110           00   00001     


Q ss_pred             ------cccccccccCcCCCcEEEEEcCccccc----CCCCCeeeeCccCC
Q 023829          211 ------EHVKDLSCLSKDLCRTLIVDNNPFSFL----LQPLNGIPCIPFSA  251 (276)
Q Consensus       211 ------~~~KdL~~L~rd~~~~IiVDDsp~~~~----~~p~NgI~V~~f~~  251 (276)
                            ....=|..+|..++.+|+|||+.....    .....||.--.|++
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y  210 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY  210 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence                  223445667999999999999998753    23347776666655

The function is not known.

>PLN02423 phosphomannomutase

Probab=92.69  E-value=0.25  Score=44.55  Aligned_cols=16  Identities=25%  Similarity=0.449  Sum_probs=12.8

Q ss_pred             CceEEEEeCCCccccc
Q 023829           93 QKLTVVLDLDETLVCA  108 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s  108 (276)
                      .|..+++||||||+++
T Consensus         6 ~~~i~~~D~DGTLl~~   21 (245)
T PLN02423          6 PGVIALFDVDGTLTAP   21 (245)
T ss_pred             cceEEEEeccCCCcCC
Confidence            4556669999999975

>PLN02887 hydrolase family protein

Probab=92.60  E-value=0.24  Score=50.37  Aligned_cols=57  Identities=14%  Similarity=0.114  Sum_probs=38.1

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      +.+.|++||||||+++.+  .+                                        -|...+-|+.+.+. ..+
T Consensus       307 ~iKLIa~DLDGTLLn~d~--~I----------------------------------------s~~t~eAI~kl~ekGi~~  344 (580)
T PLN02887        307 KFSYIFCDMDGTLLNSKS--QI----------------------------------------SETNAKALKEALSRGVKV  344 (580)
T ss_pred             CccEEEEeCCCCCCCCCC--cc----------------------------------------CHHHHHHHHHHHHCCCeE
Confidence            567899999999997521  12                                        22334556666665 777


Q ss_pred             EEEccCchhhHHHHHHHhcC
Q 023829          172 ILFTAGLEGYARPLVDRIDG  191 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp  191 (276)
                      +|.|.-...-+..+++.++.
T Consensus       345 vIATGR~~~~i~~~l~~L~l  364 (580)
T PLN02887        345 VIATGKARPAVIDILKMVDL  364 (580)
T ss_pred             EEEcCCCHHHHHHHHHHhCc
Confidence            77777776777777776654

>TIGR01675 plant-AP plant acid phosphatase

Probab=92.56  E-value=0.33  Score=43.75  Aligned_cols=49  Identities=12%  Similarity=0.248  Sum_probs=37.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEECC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRP  202 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~--f~~rl~r~  202 (276)
                      .-|++.+|++.+.+. ++|++.|.-.+...+...+.|...|+  +...+-|.
T Consensus       121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~  172 (229)
T TIGR01675       121 ALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG  172 (229)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence            689999999999987 99999998888776666666655553  35566665

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=92.22  E-value=0.22  Score=44.59  Aligned_cols=37  Identities=14%  Similarity=-0.056  Sum_probs=22.5

Q ss_pred             CccHHHHHHHhhhcc-eEEEEccCchhhHHHHHHHhcC
Q 023829          155 RPGLREFLKQLSEFA-DLILFTAGLEGYARPLVDRIDG  191 (276)
Q Consensus       155 RPgl~eFL~~l~~~y-elvI~Ts~~~~yA~~vl~~Ldp  191 (276)
                      .|.+.+.++.+.+.. .+++.|.-+..-++.+++.+..
T Consensus        23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~   60 (249)
T TIGR01485        23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL   60 (249)
T ss_pred             HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence            466666666666653 5555566565666666665543

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=91.94  E-value=0.29  Score=44.55  Aligned_cols=40  Identities=15%  Similarity=0.256  Sum_probs=29.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhh-HHHHHHHhcCC
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGY-ARPLVDRIDGE  192 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~y-A~~vl~~Ldp~  192 (276)
                      +.=||+-|||+++-++ -.|.--|+-..+. ...-++.|-..
T Consensus       122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~  163 (274)
T COG2503         122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE  163 (274)
T ss_pred             ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc
Confidence            3679999999999999 5555556666666 66666666543

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=91.71  E-value=0.33  Score=49.07  Aligned_cols=84  Identities=11%  Similarity=0.097  Sum_probs=60.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ..|||+.+++++|++. ++++|.|+..+.+++.+++.++.+ +|     .+ +........++.+   ..+.+++++|-|
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~-~~p~~K~~~v~~l---~~~~~~v~~VGD  474 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AE-VLPDDKAALIKEL---QEKGRVVAMVGD  474 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----cc-CChHHHHHHHHHH---HHcCCEEEEEeC
Confidence            3899999999999987 999999999999999999998774 22     21 2111111333443   335688999999


Q ss_pred             CcccccCCCCCeeee
Q 023829          232 NPFSFLLQPLNGIPC  246 (276)
Q Consensus       232 sp~~~~~~p~NgI~V  246 (276)
                      ...-...-..+++.|
T Consensus       475 g~nD~~al~~A~vgi  489 (562)
T TIGR01511       475 GINDAPALAQADVGI  489 (562)
T ss_pred             CCccHHHHhhCCEEE
Confidence            988776544555544

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=91.40  E-value=0.38  Score=43.90  Aligned_cols=35  Identities=14%  Similarity=0.016  Sum_probs=20.8

Q ss_pred             CccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHh
Q 023829          155 RPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       155 RPgl~eFL~~l~~--~yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      -|.+.+-|+.|.+  ...++|.|.-...-++.+++.+
T Consensus        38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~   74 (266)
T PRK10187         38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPY   74 (266)
T ss_pred             CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence            3556666666665  2566666666666666555443

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=90.69  E-value=0.27  Score=44.08  Aligned_cols=41  Identities=12%  Similarity=0.113  Sum_probs=32.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      ..=||+.+|++.+.+. ++|++-|.-....-+.-++.|...|
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G  156 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAG  156 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcC
Confidence            3679999999999998 8898888877776666666665544

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=89.89  E-value=0.62  Score=39.60  Aligned_cols=77  Identities=17%  Similarity=0.202  Sum_probs=59.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~--~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      ..||++.++|+.|++. +.++|.|......|..+++.++...  .|....    +... +..+.+-++.++.+.++|+.|
T Consensus       127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~----~kP~-~k~~~~~i~~l~~~~~~v~~v  201 (215)
T PF00702_consen  127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI----GKPE-PKIFLRIIKELQVKPGEVAMV  201 (215)
T ss_dssp             EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE----TTTH-HHHHHHHHHHHTCTGGGEEEE
T ss_pred             cchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc----cccc-chhHHHHHHHHhcCCCEEEEE
Confidence            4899999999999998 9999999999999999999998844  222211    1111 123466777788788899999


Q ss_pred             EcCcc
Q 023829          230 DNNPF  234 (276)
Q Consensus       230 DDsp~  234 (276)
                      -|...
T Consensus       202 GDg~n  206 (215)
T PF00702_consen  202 GDGVN  206 (215)
T ss_dssp             ESSGG
T ss_pred             ccCHH
Confidence            99864

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=89.78  E-value=1.3  Score=41.03  Aligned_cols=86  Identities=8%  Similarity=0.074  Sum_probs=52.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEECCCcccc-CCccccccc--cc-cCcCCCcE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRPSTTST-EYREHVKDL--SC-LSKDLCRT  226 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~--f~~rl~r~~c~~~-k~~~~~KdL--~~-L~rd~~~~  226 (276)
                      .=|++.+|++.+.+. ++|++.|.-.+..-+.-++.|...|+  ....+-|+.-... +...-.|--  .. +...-+=+
T Consensus       146 Alp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv  225 (275)
T TIGR01680       146 ALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIV  225 (275)
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEE
Confidence            568999999999987 99999998888777777777776665  3556666432111 111111211  11 11222234


Q ss_pred             EEEEcCcccccCC
Q 023829          227 LIVDNNPFSFLLQ  239 (276)
Q Consensus       227 IiVDDsp~~~~~~  239 (276)
                      ..|+|...-+...
T Consensus       226 ~~iGDq~sDl~G~  238 (275)
T TIGR01680       226 GIIGDQWNDLKGE  238 (275)
T ss_pred             EEECCCHHhccCC
Confidence            6788887766544

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=89.68  E-value=0.5  Score=45.06  Aligned_cols=54  Identities=22%  Similarity=0.312  Sum_probs=45.2

Q ss_pred             eEEEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-c-------CCCceeEEEECC
Q 023829          149 HVTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-D-------GENLFSLRLYRP  202 (276)
Q Consensus       149 ~~~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L-d-------p~~~f~~rl~r~  202 (276)
                      .-|+.+-||+.++|+.|.+. ..+.|.|++...|++.+++.+ +       -..+|..++...
T Consensus       180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a  242 (343)
T TIGR02244       180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDA  242 (343)
T ss_pred             HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCC
Confidence            34577899999999999987 999999999999999999997 5       345777666533

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=89.53  E-value=0.2  Score=44.65  Aligned_cols=16  Identities=31%  Similarity=0.343  Sum_probs=13.9

Q ss_pred             ceEEEEeCCCcccccc
Q 023829           94 KLTVVLDLDETLVCAY  109 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~  109 (276)
                      -+.|+|||||||+++.
T Consensus        10 ~k~iiFDlDGTL~D~~   25 (238)
T PRK10748         10 ISALTFDLDDTLYDNR   25 (238)
T ss_pred             ceeEEEcCcccccCCh
Confidence            4689999999999963

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=88.76  E-value=0.31  Score=42.66  Aligned_cols=95  Identities=17%  Similarity=0.165  Sum_probs=71.0

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHH----HHhcCCCceeEEEECCCccccCCccccccccccCcCCCc
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLV----DRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl----~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~  225 (276)
                      .-++-|.+-++++.-.+. ..+.|||||+-. |+.++    +..|..++|+..+....-...+...|.|.+..+|-++..
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e  179 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE  179 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchh
Confidence            355789999999988876 999999999854 33333    234566778877665443333334799999999999999


Q ss_pred             EEEEEcCcccccCCCCCeeee
Q 023829          226 TLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      ++++-|++.......+.|+..
T Consensus       180 ilFLSDn~~EL~AA~~vGl~t  200 (229)
T COG4229         180 ILFLSDNPEELKAAAGVGLAT  200 (229)
T ss_pred             eEEecCCHHHHHHHHhcchhe
Confidence            999999999877666666643

>PLN02151 trehalose-phosphatase

Probab=87.62  E-value=0.88  Score=43.60  Aligned_cols=34  Identities=9%  Similarity=0.147  Sum_probs=20.8

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhHHHHHH
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVD  187 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~  187 (276)
                      .-|++.+-|+.|++.+.++|.|--...-++.++.
T Consensus       121 ~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~  154 (354)
T PLN02151        121 MSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK  154 (354)
T ss_pred             CCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence            4466666666666666666666655555555543

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=87.27  E-value=0.3  Score=41.75  Aligned_cols=15  Identities=27%  Similarity=0.222  Sum_probs=13.1

Q ss_pred             eEEEEeCCCcccccc
Q 023829           95 LTVVLDLDETLVCAY  109 (276)
Q Consensus        95 ~tLVLDLDgTLv~s~  109 (276)
                      +.|+||+||||+++.
T Consensus         2 k~viFD~dgTLiD~~   16 (198)
T TIGR01428         2 KALVFDVYGTLFDVH   16 (198)
T ss_pred             cEEEEeCCCcCccHH
Confidence            479999999999864

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=87.23  E-value=0.28  Score=40.90  Aligned_cols=13  Identities=38%  Similarity=0.373  Sum_probs=11.7

Q ss_pred             EEEeCCCcccccc
Q 023829           97 VVLDLDETLVCAY  109 (276)
Q Consensus        97 LVLDLDgTLv~s~  109 (276)
                      |+||+||||+++.
T Consensus         2 viFD~DGTL~D~~   14 (175)
T TIGR01493         2 MVFDVYGTLVDVH   14 (175)
T ss_pred             eEEecCCcCcccH
Confidence            7999999999964

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PLN03017 trehalose-phosphatase

Probab=86.96  E-value=1  Score=43.31  Aligned_cols=32  Identities=16%  Similarity=0.139  Sum_probs=19.3

Q ss_pred             CccHHHHHHHhhhcceEEEEccCchhhHHHHH
Q 023829          155 RPGLREFLKQLSEFADLILFTAGLEGYARPLV  186 (276)
Q Consensus       155 RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl  186 (276)
                      -|.+.+-|+.|.+.+.++|.|--...-++.++
T Consensus       135 ~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~  166 (366)
T PLN03017        135 SSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFV  166 (366)
T ss_pred             CHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhh
Confidence            35555666666655666666666655555553

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=86.77  E-value=0.54  Score=47.36  Aligned_cols=85  Identities=13%  Similarity=0.110  Sum_probs=62.4

Q ss_pred             eeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829          153 FERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..|||+.+.|++|.+.  ++++|.|+..+.+++.+++.++...+|...     ....| ...++.   +....+++++|-
T Consensus       384 ~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~-----~p~~K-~~~v~~---l~~~~~~v~~vG  454 (556)
T TIGR01525       384 QLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL-----LPEDK-LAIVKE---LQEEGGVVAMVG  454 (556)
T ss_pred             cchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC-----CHHHH-HHHHHH---HHHcCCEEEEEE
Confidence            3999999999999865  899999999999999999999987766532     11111 123333   334556999999


Q ss_pred             cCcccccCCCCCeeee
Q 023829          231 NNPFSFLLQPLNGIPC  246 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V  246 (276)
                      |...-...-..+|+-|
T Consensus       455 Dg~nD~~al~~A~vgi  470 (556)
T TIGR01525       455 DGINDAPALAAADVGI  470 (556)
T ss_pred             CChhHHHHHhhCCEeE
Confidence            9998766555555544

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=86.77  E-value=0.39  Score=48.21  Aligned_cols=84  Identities=11%  Similarity=0.141  Sum_probs=63.0

Q ss_pred             eeCccHHHHHHHhhhc-c-eEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829          153 FERPGLREFLKQLSEF-A-DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-y-elvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..|||+.+.+++|++. + +++|.|+..+.+++.+++.++..++|....     ..    .-.+-++.+....+++++|-
T Consensus       362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-----p~----~K~~~i~~l~~~~~~v~~vG  432 (536)
T TIGR01512       362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-----PE----DKLEIVKELREKYGPVAMVG  432 (536)
T ss_pred             cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-----cH----HHHHHHHHHHhcCCEEEEEe
Confidence            3899999999999987 8 999999999999999999998877664321     11    11233444455668999999


Q ss_pred             cCcccccCCCCCeee
Q 023829          231 NNPFSFLLQPLNGIP  245 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~  245 (276)
                      |...-...-..+++-
T Consensus       433 Dg~nD~~al~~A~vg  447 (536)
T TIGR01512       433 DGINDAPALAAADVG  447 (536)
T ss_pred             CCHHHHHHHHhCCEE
Confidence            998876554455543

.

>TIGR00685 T6PP trehalose-phosphatase

Probab=85.98  E-value=1  Score=40.23  Aligned_cols=15  Identities=33%  Similarity=0.366  Sum_probs=13.5

Q ss_pred             CceEEEEeCCCcccc
Q 023829           93 QKLTVVLDLDETLVC  107 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~  107 (276)
                      ++..|+||+||||+.
T Consensus         2 ~~~~l~lD~DGTL~~   16 (244)
T TIGR00685         2 RKRAFFFDYDGTLSE   16 (244)
T ss_pred             CcEEEEEecCccccC
Confidence            578899999999996

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PLN02580 trehalose-phosphatase

Probab=85.80  E-value=1.5  Score=42.52  Aligned_cols=61  Identities=18%  Similarity=0.240  Sum_probs=46.3

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye  170 (276)
                      ..++..|+||.||||.--..   -|.                                  .+..=|++.+-|+.|++.+.
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~---~Pd----------------------------------~A~~s~~~~~aL~~La~~~~  158 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVD---DPD----------------------------------RALMSDAMRSAVKNVAKYFP  158 (384)
T ss_pred             hcCCeEEEEecCCccCCCCC---Ccc----------------------------------cccCCHHHHHHHHHHhhCCC
Confidence            44678899999999985210   010                                  03356899999999999999


Q ss_pred             EEEEccCchhhHHHHHHH
Q 023829          171 LILFTAGLEGYARPLVDR  188 (276)
Q Consensus       171 lvI~Ts~~~~yA~~vl~~  188 (276)
                      ++|.|--...-++..+..
T Consensus       159 VAIVSGR~~~~L~~~l~~  176 (384)
T PLN02580        159 TAIISGRSRDKVYELVGL  176 (384)
T ss_pred             EEEEeCCCHHHHHHHhCC
Confidence            999999888888877764

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=83.55  E-value=3.6  Score=36.49  Aligned_cols=88  Identities=15%  Similarity=0.280  Sum_probs=59.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEE-EECCCccccC---------Cc---ccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLR-LYRPSTTSTE---------YR---EHVKD  215 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~--~f~~r-l~r~~c~~~k---------~~---~~~Kd  215 (276)
                      ..+-||++|+...|.+. .++++-|-|-+..+++|.+.|+...  .+..+ ++..+-.+..         .+   .-++-
T Consensus        87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~  166 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL  166 (227)
T ss_pred             CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence            34789999999999987 9999999999999999999998753  44333 2222111111         01   12333


Q ss_pred             ccccCcCCCcEEEEEcCcccccCCC
Q 023829          216 LSCLSKDLCRTLIVDNNPFSFLLQP  240 (276)
Q Consensus       216 L~~L~rd~~~~IiVDDsp~~~~~~p  240 (276)
                      |++ +.+-+.++.|=|-..-...-|
T Consensus       167 lrk-~~~~~~~~mvGDGatDlea~~  190 (227)
T KOG1615|consen  167 LRK-NYNYKTIVMVGDGATDLEAMP  190 (227)
T ss_pred             HHh-CCChheeEEecCCccccccCC
Confidence            334 778888888888766554433

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=83.45  E-value=2.2  Score=39.31  Aligned_cols=60  Identities=18%  Similarity=0.180  Sum_probs=45.2

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye  170 (276)
                      ..+|.+++||.||||......   |                                  .-...=+++.+.|..|+..+.
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~---p----------------------------------~~a~~~~~l~~lL~~Las~~~   57 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPH---P----------------------------------EAAVPDDRLLSLLQDLASDPR   57 (266)
T ss_pred             cccceEEEEeccccccccccC---c----------------------------------cccCCCHHHHHHHHHHHhcCC
Confidence            447899999999999974210   0                                  002356788999999999988


Q ss_pred             --EEEEccCchhhHHHHHH
Q 023829          171 --LILFTAGLEGYARPLVD  187 (276)
Q Consensus       171 --lvI~Ts~~~~yA~~vl~  187 (276)
                        ++|.|--+..-.+..+.
T Consensus        58 ~~v~iiSGR~~~~l~~~~~   76 (266)
T COG1877          58 NVVAIISGRSLAELERLFG   76 (266)
T ss_pred             CeEEEEeCCCHHHHHHhcC
Confidence              88888888888877777

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=82.26  E-value=2.1  Score=44.63  Aligned_cols=35  Identities=14%  Similarity=0.267  Sum_probs=23.1

Q ss_pred             CccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHh
Q 023829          155 RPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       155 RPgl~eFL~~l~~--~yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      -|.+.+.|+.|.+  ...++|.|.-+....+..+..+
T Consensus       516 ~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~  552 (726)
T PRK14501        516 DKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL  552 (726)
T ss_pred             CHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC
Confidence            4566677777776  4677777777766666665543

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=81.46  E-value=7.8  Score=32.06  Aligned_cols=80  Identities=13%  Similarity=0.159  Sum_probs=53.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCc---------eeEEEECCCccccCCccccccccc-c
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENL---------FSLRLYRPSTTSTEYREHVKDLSC-L  219 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~-~~yA~~vl~~Ldp~~~---------f~~rl~r~~c~~~k~~~~~KdL~~-L  219 (276)
                      ...=|....-|..|++. .++++.+.+. +++|.+.++.+.....         |......+...    -.+.|++-. -
T Consensus        43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsk----lghfke~~n~s  118 (144)
T KOG4549|consen   43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSK----LGHFKEFTNNS  118 (144)
T ss_pred             eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCccc----chhHHHHhhcc
Confidence            33568888999999988 9999998775 5899999999875533         33333333211    123466544 3


Q ss_pred             CcCCCcEEEEEcCccc
Q 023829          220 SKDLCRTLIVDNNPFS  235 (276)
Q Consensus       220 ~rd~~~~IiVDDsp~~  235 (276)
                      +...++..+.||...+
T Consensus       119 ~~~~k~~~~fdDesrn  134 (144)
T KOG4549|consen  119 NSIEKNKQVFDDESRN  134 (144)
T ss_pred             CcchhceeeecccccC
Confidence            5667788888886543

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=80.46  E-value=4.7  Score=36.51  Aligned_cols=34  Identities=15%  Similarity=0.130  Sum_probs=24.8

Q ss_pred             HHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          160 EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       160 eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      .-+..+.+. |+|+.-||-+..-....=+.|+.++
T Consensus        30 pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~   64 (274)
T COG3769          30 PVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG   64 (274)
T ss_pred             hHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence            445667766 9999999887766666667777664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	276
3l0y_A	184	Crystal Structure Of Scp1 Phosphatase D98a Mutant L		2e-15
2ghq_A	181	Ctd-Specific Phosphatase Scp1 In Complex With Pepti		2e-15
1ta0_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		2e-15
3pgl_A	180	Crystal Structure Of Human Small C-Terminal Domain		2e-15
2q5e_A	187	Crystal Structure Of Human Carboxy-Terminal Domain		5e-15
1t9z_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		6e-15
2hhl_A	195	Crystal Structure Of The Human Small Ctd Phosphatas		8e-15
3l0b_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		2e-14
3l0c_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		2e-14
3qle_A	204	Structural Basis For The Function Of Tim50 In The M		5e-12

>pdb|3L0Y|A Chain A, Crystal Structure Of Scp1 Phosphatase D98a Mutant Length = 184

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 52  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 111
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 112 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 149

>pdb|2GHQ|A Chain A, Ctd-Specific Phosphatase Scp1 In Complex With Peptide C- Terminal Domain Of Rna Polymerase Ii Length = 181

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 49  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 108
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 109 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 146

>pdb|1TA0|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein With Associated Ligand Length = 197

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 49  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV- 107
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 108 FHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 146

>pdb|3PGL|A Chain A, Crystal Structure Of Human Small C-Terminal Domain Phosphatase 1 (Scp1) Bound To Rabeprazole Length = 180

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 48  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 107
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 108 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 145

>pdb|2Q5E|A Chain A, Crystal Structure Of Human Carboxy-Terminal Domain Rna Polymerase Ii Polypeptide A Small Phosphatase 2 Length = 187

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
           E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct: 46  EIEGT--THQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 103
Query: 200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct: 104 FRESCVFHQ-GCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 148

>pdb|1T9Z|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein Length = 197

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL++  E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 49  VHQVYVLKRPHVDEFLQRXGELFECVLFTASLAKYADPVADXLDKWGAFRARLFRESCV- 107
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI DN+P S++  P N +P
Sbjct: 108 FHRGNYVKDLSRLGRDLRRVLIXDNSPASYVFHPDNAVP 146

>pdb|2HHL|A Chain A, Crystal Structure Of The Human Small Ctd Phosphatase 3 Isoform 1 Length = 195

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           I+ V V +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S   
Sbjct: 62  IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV- 120
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L ++L + +IVDN+P S++  P N +P 
Sbjct: 121 FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160

>pdb|3L0B|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant Phosphory Intermediate Length = 184

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 52  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 111
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI+ N+P S++  P N +P
Sbjct: 112 HR-GNYVKDLSRLGRDLRRVLILANSPASYVFHPDNAVP 149

>pdb|3L0C|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant With Trap Inorganic Phosphate Length = 184

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 52  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 111
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
                +VKDLS L +DL R LI+ N+P S++  P N +P
Sbjct: 112 HR-GNYVKDLSRLGRDLRRVLILANSPASYVFHPDNAVP 149

>pdb|3QLE|A Chain A, Structural Basis For The Function Of Tim50 In The Mitochondrial Presequence Translocase Length = 204

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYRE- 211
           +RPG   FL  LS++ +++LF++    Y+  + +++D  + F S  L++       Y++ 
Sbjct: 60  KRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCV---YKDG 116
Query: 212 -HVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFL 269
            H+KDLS L++DL + +I+D +P S+ LQP N IP  P++     D++++  +  L++L
Sbjct: 117 VHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEA--DDKLVRLIPFLEYL 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	5e-47
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	8e-47
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	3e-43
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	5e-33
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	6e-29
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	4e-24

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score =  154 bits (391), Expect = 5e-47
 Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 24/177 (13%)

Query: 93  QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTV 152
            K+ VV++LDETLV    +S  PV   +                     E    ++ V V
Sbjct: 14  DKICVVINLDETLVH---SSFKPVNNADFII----------------PVEIDGVVHQVYV 54

Query: 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREH 212
            +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S        +
Sbjct: 55  LKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR-GNY 113

Query: 213 VKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLLKFL 269
           VKDLS L +DL R LI+DN+P S++  P N +P   +      D ++     LL F 
Sbjct: 114 VKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF-DNMSDTELH---DLLPFF 166

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score =  154 bits (391), Expect = 8e-47
 Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 21/183 (11%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           V+     K  VV+DLDETLV +                       +E             
Sbjct: 21  VTVLDYGKKCVVIDLDETLVHSSFKPISNADFI----------VPVEI---------DGT 61

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           I+ V V +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S   
Sbjct: 62  IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF 121

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLL 266
                +VKDLS L ++L + +IVDN+P S++  P N +P   +      D ++L  +   
Sbjct: 122 HR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWF-DDMTDTELLDLIPFF 179

Query: 267 KFL 269
           + L
Sbjct: 180 EGL 182

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score =  145 bits (367), Expect = 3e-43
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 41/188 (21%)

Query: 85  DVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGK 144
                   + LT+V+ L++ LV                                   E  
Sbjct: 25  PPPPPPYQRPLTLVITLEDFLVH---------------------------------SEWS 51

Query: 145 PKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPS 203
            K +     +RPG   FL  LS++ +++LF++    Y+  + +++D  +   S  L++  
Sbjct: 52  QK-HGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEH 110

Query: 204 TTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNV 263
               +   H+KDLS L++DL + +I+D +P S+ LQP N IP  P++ G+  D      V
Sbjct: 111 CVYKD-GVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWN-GEADDKL----V 164

Query: 264 TLLKFLLS 271
            L+ FL  
Sbjct: 165 RLIPFLEY 172

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score =  123 bits (309), Expect = 5e-33
 Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 10/174 (5%)

Query: 80  RDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDK 139
           R   ++V    + ++L++++DLD+T++ A    ++   + +          ++   +  +
Sbjct: 4   RLESENVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQE 63

Query: 140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLR 198
              G     ++    RPGL +FL+++SE  +L ++T G + YA+ +   ID    LF  R
Sbjct: 64  GPSGYTSCYYIKF--RPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDR 121

Query: 199 -LYRPSTTSTEYREHVKDLS-CLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250
            L R  + S       K L      D    +++D+    +   P N I  +P+ 
Sbjct: 122 VLSRDDSGSL----AQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYE 170

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score =  113 bits (282), Expect = 6e-29
 Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 10/184 (5%)

Query: 78  AVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSS 137
           A R   ++V    + ++L++++ LD+T++ A    ++   + +          ++   + 
Sbjct: 10  ASRLESENVKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNL 69

Query: 138 DKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFS 196
            +   G        +  RPGL +FL+++SE  +L ++T G + YA+ +   ID    LF 
Sbjct: 70  QEGPSGYTS--CYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQ 127

Query: 197 LR-LYRPSTTSTEYREHVKDLS-CLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQP 254
            R L R  + S       K L      D    +++D+    +   P N I  +P+     
Sbjct: 128 DRVLSRDDSGSL----AQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFFVG 182

Query: 255 HDNQ 258
             + 
Sbjct: 183 IGDI 186

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score = 98.4 bits (244), Expect = 4e-24
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 144 KPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLY--- 200
           +      T   RP L EFL    E  D+++++A    +    +  +   +  + ++    
Sbjct: 155 RSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYL 214

Query: 201 -----RPSTTSTEYREHVKDLSCLSK-----DLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250
                            VK L  +       +   T++ D+   +FL+ P +G+   PF 
Sbjct: 215 DSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFR 274

Query: 251 A---GQPHDNQVLTNVTLLKFL------LSSLNH 275
                +  D ++L     L+ +       +SLNH
Sbjct: 275 QAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLNH 308

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	276
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	100.0
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	100.0
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	100.0
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	99.96
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.96
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.32
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.12
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.11
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.1
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.1
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.1
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.04
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.0
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	98.98
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.98
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.96
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	98.96
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	98.94
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	98.93
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.91
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.91
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	98.91
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	98.9
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.9
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	98.89
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.88
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	98.88
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	98.87
2zg6_A	220	Putative uncharacterized protein ST2620, probable	98.87
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	98.85
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.84
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.84
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	98.84
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	98.84
2hsz_A	243	Novel predicted phosphatase; structural genomics,	98.84
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.83
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.83
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	98.83
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.82
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	98.82
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.79
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.79
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.78
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	98.76
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	98.75
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.74
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.74
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	98.73
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.73
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.72
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	98.7
1te2_A	226	Putative phosphatase; structural genomics, phospha	98.69
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.67
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	98.67
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	98.67
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.63
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	98.6
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.59
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.59
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.59
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	98.59
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.58
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.58
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.56
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	98.54
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	98.53
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	98.53
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.52
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.51
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.51
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.5
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.5
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	98.49
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	98.49
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.46
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	98.42
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.4
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.39
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.38
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	98.37
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.35
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.35
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	98.34
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.33
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.33
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.3
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.27
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.2
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.19
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.17
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.15
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.1
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.09
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.08
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.06
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.05
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	98.04
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	97.96
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.81
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	97.72
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	97.7
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	97.48
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.47
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.45
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	97.39
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	97.38
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	97.3
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.24
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	97.15
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	97.11
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.11
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.89
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	96.62
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	96.55
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.38
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	96.37
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	96.34
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	96.28
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	96.26
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	96.24
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.22
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	95.17
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	96.15
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	96.14
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.11
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	96.04
3dao_A	283	Putative phosphatse; structural genomics, joint ce	95.92
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	95.87
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	95.86
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	95.73
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	95.62
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	95.62
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	95.47
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	95.45
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.44
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	95.29
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	95.1
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	95.1
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	94.95
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	94.93
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	94.83
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	94.81
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	94.76
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	94.75
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	94.24
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	94.17
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	92.94
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	91.88
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	91.12
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	89.88
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	89.67
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	89.37
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	88.62
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	87.72
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	84.77
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	84.16
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	83.78
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	82.27
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	81.51

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=100.00  E-value=2e-39  Score=284.12  Aligned_cols=147  Identities=29%  Similarity=0.534  Sum_probs=132.9

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceE
Q 023829           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADL  171 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yel  171 (276)
                      .+|+||||||||||||+.+..                                  ...+++++|||+++||++|+++|||
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~----------------------------------~~~~~v~~RPgl~eFL~~l~~~yei   77 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQ----------------------------------KHGWRTAKRPGADYFLGYLSQYYEI   77 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEET----------------------------------TTEEEEEECTTHHHHHHHHTTTEEE
T ss_pred             CCCeEEEEeccccEEeeeccc----------------------------------cCceeEEeCCCHHHHHHHHHhCCEE
Confidence            478999999999999974321                                  1246799999999999999999999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          172 ILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +||||+.+.||++|++.||+.+ +|.++++|++|... .+.|+|||+.||+++++||+|||++.+|..||+|||+|.+|.
T Consensus        78 vI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~-~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~  156 (204)
T 3qle_A           78 VLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK-DGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWN  156 (204)
T ss_dssp             EEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-TTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCC
T ss_pred             EEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-CCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeEC
Confidence            9999999999999999999985 89999999999874 478999999999999999999999999999999999999997


Q ss_pred             CCCCCChHHhHHHHHHHHhhh--cCCC
Q 023829          251 AGQPHDNQVLTNVTLLKFLLS--SLNH  275 (276)
Q Consensus       251 ~g~~~D~eL~~l~~~L~~La~--~~d~  275 (276)
                       |++ |+||++|+|||+.|+.  .+||
T Consensus       157 -~~~-D~eL~~L~~~L~~L~~~~~~DV  181 (204)
T 3qle_A          157 -GEA-DDKLVRLIPFLEYLATQQTKDV  181 (204)
T ss_dssp             -SSC-CCHHHHHHHHHHHHHHTCCSCS
T ss_pred             -CCC-ChhHHHHHHHHHHHhhcChHHH
Confidence             665 7799999999999995  6776

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=100.00  E-value=7.8e-38  Score=268.46  Aligned_cols=164  Identities=34%  Similarity=0.511  Sum_probs=142.0

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye  170 (276)
                      ..+|++|||||||||||+.......         .   .|.+.+     ..+|  ....+++++|||+++||++++++|+
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~~~---------~---d~~~~~-----~~~~--~~~~~~v~~rPg~~efL~~l~~~~~   72 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPVNN---------A---DFIIPV-----EIDG--VVHQVYVLKRPHVDEFLQRMGELFE   72 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCSS---------C---SEEEEE-----EETT--EEEEEEEEECTTHHHHHHHHHHHSE
T ss_pred             cCCCeEEEECCCCCeECCcccCCCC---------c---cceeee-----eeCC--eeEEEEEEeCCCHHHHHHHHHhCCC
Confidence            3479999999999999985422100         0   122211     1223  2345789999999999999999999


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++|||++.+.||+++++.||+.++|..+++|++|...+ +.|.|+|+++|+++++||+|||++.++..+++|||+|.+|.
T Consensus        73 i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k-~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~  151 (181)
T 2ght_A           73 CVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF  151 (181)
T ss_dssp             EEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET-TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCS
T ss_pred             EEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC-CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEecccc
Confidence            99999999999999999999999999999999998765 68999999999999999999999999999999999999998


Q ss_pred             CCCCCChHHhHHHHHHHHhhhcCCC
Q 023829          251 AGQPHDNQVLTNVTLLKFLLSSLNH  275 (276)
Q Consensus       251 ~g~~~D~eL~~l~~~L~~La~~~d~  275 (276)
                       |+++|++|.+|+|||+.|++.+||
T Consensus       152 -~~~~D~eL~~l~~~L~~l~~~~DV  175 (181)
T 2ght_A          152 -DNMSDTELHDLLPFFEQLSRVDDV  175 (181)
T ss_dssp             -SCTTCCHHHHHHHHHHHHTTCSCT
T ss_pred             -CCCChHHHHHHHHHHHHhCcCccH
Confidence             899999999999999999999998

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=263.98  Aligned_cols=163  Identities=34%  Similarity=0.532  Sum_probs=138.8

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye  170 (276)
                      ..+|++|||||||||||+.+.....         .   .|.+.+     ..+|  ....+++++|||+++||++|++.|+
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~~~~---------~---d~~~~~-----~~~g--~~~~~~v~~RPgv~efL~~l~~~~~   85 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKPISN---------A---DFIVPV-----EIDG--TIHQVYVLKRPHVDEFLQRMGQLFE   85 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSCCTT---------C---SEEEEE-----EETT--EEEEEEEEECTTHHHHHHHHHHHSE
T ss_pred             cCCCeEEEEccccceEcccccCCCC---------c---cceeee-----ecCC--ceeeEEEEeCcCHHHHHHHHHcCCe
Confidence            3479999999999999986432100         0   122221     1223  2346789999999999999999999


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++|||++.+.||+++++.+|+.++|..+++|++|...+ +.|.|+|+++|+++++||+|||++.++..++.|||+|.+|.
T Consensus        86 i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~  164 (195)
T 2hhl_A           86 CVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWF  164 (195)
T ss_dssp             EEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCS
T ss_pred             EEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeec
Confidence            99999999999999999999999999999999998776 78999999999999999999999999999999999999998


Q ss_pred             CCCCCChHHhHHHHHHHHhhhcCC
Q 023829          251 AGQPHDNQVLTNVTLLKFLLSSLN  274 (276)
Q Consensus       251 ~g~~~D~eL~~l~~~L~~La~~~d  274 (276)
                       ++++|+||++|+|||+.|+..+|
T Consensus       165 -~~~~D~eL~~L~~~L~~l~~~~~  187 (195)
T 2hhl_A          165 -DDMTDTELLDLIPFFEGLSREDD  187 (195)
T ss_dssp             -SCTTCCHHHHHHHHHHHHHC---
T ss_pred             -CCCChHHHHHHHHHHHHHHhCcC
Confidence             89999999999999999999876

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=100.00  E-value=3.3e-36  Score=279.92  Aligned_cols=152  Identities=24%  Similarity=0.308  Sum_probs=133.2

Q ss_pred             ccccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhh
Q 023829           88 SEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSE  167 (276)
Q Consensus        88 ~~~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~  167 (276)
                      +....+|+||||||||||||+....                                   ..+++++|||+++||++|++
T Consensus       134 ~p~~~~k~tLVLDLDeTLvh~~~~~-----------------------------------~~~~~~~RP~l~eFL~~l~~  178 (320)
T 3shq_A          134 APPREGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGTELMRPYLHEFLTSAYE  178 (320)
T ss_dssp             SCCCTTCEEEEECCBTTTBCSSSCC-----------------------------------SSHHHHBCTTHHHHHHHHHH
T ss_pred             CCCcCCCcEEEEeccccEEcccccC-----------------------------------CCcceEeCCCHHHHHHHHHh
Confidence            3445689999999999999974210                                   12357799999999999999


Q ss_pred             cceEEEEccCchhhHHHHHHHhcCCCc--eeEEEECCCcccc-----CCc-ccccccccc-----CcCCCcEEEEEcCcc
Q 023829          168 FADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRPSTTST-----EYR-EHVKDLSCL-----SKDLCRTLIVDNNPF  234 (276)
Q Consensus       168 ~yelvI~Ts~~~~yA~~vl~~Ldp~~~--f~~rl~r~~c~~~-----k~~-~~~KdL~~L-----~rd~~~~IiVDDsp~  234 (276)
                      +|||+||||+.+.||++|++.||+.+.  |..+++|++|...     +++ .|+|||++|     |+++++||||||++.
T Consensus       179 ~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~  258 (320)
T 3shq_A          179 DYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRR  258 (320)
T ss_dssp             HEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGG
T ss_pred             CCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChH
Confidence            999999999999999999999999875  6788999998632     234 599999999     999999999999999


Q ss_pred             cccCCCCCeeeeCccCCCC----CCChHHhHHHHHHHHhh-hcCCC
Q 023829          235 SFLLQPLNGIPCIPFSAGQ----PHDNQVLTNVTLLKFLL-SSLNH  275 (276)
Q Consensus       235 ~~~~~p~NgI~V~~f~~g~----~~D~eL~~l~~~L~~La-~~~d~  275 (276)
                      +|..||+|||+|.+|. |+    ++|++|++|++||+.|+ +++||
T Consensus       259 ~~~~~p~NgI~I~~~~-~~~~~~~~D~eL~~L~~~L~~L~~~~~DV  303 (320)
T 3shq_A          259 NFLMNPKSGLKIRPFR-QAHLNRGTDTELLKLSDYLRKIAHHCPDF  303 (320)
T ss_dssp             GGTTSGGGEEECCCCC-CHHHHTTTCCHHHHHHHHHHHHHHHCSCG
T ss_pred             HhccCcCceEEeCeEc-CCCCCCCccHHHHHHHHHHHHHhccCcch
Confidence            9999999999999997 54    78999999999999999 99887

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=99.96  E-value=4.1e-30  Score=247.09  Aligned_cols=159  Identities=23%  Similarity=0.387  Sum_probs=120.8

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhh------hhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHH
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLR------NQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQ  164 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~------~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~  164 (276)
                      ..+|++||||||+|||||.....+.++.+      ..+. .+...|.++.     ...|  ....+||++|||+++||++
T Consensus        23 ~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~-~dv~~F~l~~-----~~~~--~~~~~~V~~RPgl~eFL~~   94 (442)
T 3ef1_A           23 QEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVL-RDVRSFNLQE-----GPSG--YTSCYYIKFRPGLAQFLQK   94 (442)
T ss_dssp             HTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGG-TTCEEEEEEE-----TTTT--EEEEEEEEECTTHHHHHHH
T ss_pred             hcCCeEEEEeeccceeccccccccchhccCCCCcchhhh-ccccceeeee-----ccCC--ceeEEEEEeCCCHHHHHHH
Confidence            45899999999999999854321111111      0111 1222354432     1233  2468999999999999999


Q ss_pred             hhhcceEEEEccCchhhHHHHHHHhcCCC-ceeEEEE-CCCccccCCcccccccccc-CcCCCcEEEEEcCcccccCCCC
Q 023829          165 LSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLY-RPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQPL  241 (276)
Q Consensus       165 l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~-r~~c~~~k~~~~~KdL~~L-~rd~~~~IiVDDsp~~~~~~p~  241 (276)
                      |+++|||+|||++.+.||++|++.|||.+ +|.+|++ |++|+    ..|+|||++| |+|++++|||||++.+|..|| 
T Consensus        95 ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg----~~~~KdL~~ll~rdl~~vvIIDd~p~~~~~~p-  169 (442)
T 3ef1_A           95 ISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG----SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-  169 (442)
T ss_dssp             HTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSS----CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-
T ss_pred             HhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCC----CceeeehHHhcCCCcceEEEEECCHHHhCCCC-
Confidence            99999999999999999999999999998 7998876 99995    3589999976 999999999999999999998 


Q ss_pred             CeeeeCccC----CCCCCChHHhHH
Q 023829          242 NGIPCIPFS----AGQPHDNQVLTN  262 (276)
Q Consensus       242 NgI~V~~f~----~g~~~D~eL~~l  262 (276)
                      |||+|.+|.    .|+.+|..|...
T Consensus       170 N~I~I~~~~fF~~~gD~n~~~l~~~  194 (442)
T 3ef1_A          170 NLIKVVPYEFFVGIGDINSNFLAKS  194 (442)
T ss_dssp             TEEECCCCCCSTTCCCSCC------
T ss_pred             CEEEcCCccccCCCCcccccccccc
Confidence            999999995    277777655443

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.96  E-value=2.3e-29  Score=238.18  Aligned_cols=148  Identities=25%  Similarity=0.396  Sum_probs=115.0

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhh-----hhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHh
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLR-----NQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQL  165 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~-----~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l  165 (276)
                      ..+|++||||||||||||........+.+     +.........|.++..     ..|  ....+++++|||+++||+++
T Consensus        15 ~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~-----~~~--~~~~~~v~~RPg~~eFL~~l   87 (372)
T 3ef0_A           15 QEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEG-----PSG--YTSCYYIKFRPGLAQFLQKI   87 (372)
T ss_dssp             HHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEET-----TTT--EEEEEEEEECTTHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeec-----cCC--ceEEEEEEECcCHHHHHHHH
Confidence            34799999999999999853211111110     0001112223444321     122  24578999999999999999


Q ss_pred             hhcceEEEEccCchhhHHHHHHHhcCCC-ceeEEEE-CCCccccCCcccccccccc-CcCCCcEEEEEcCcccccCCCCC
Q 023829          166 SEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLY-RPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQPLN  242 (276)
Q Consensus       166 ~~~yelvI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~-r~~c~~~k~~~~~KdL~~L-~rd~~~~IiVDDsp~~~~~~p~N  242 (276)
                      +++|||+|||++.+.||++|++.|||.+ +|.++++ |++|+    ..|+|||++| |+++++||||||++.+|..|| |
T Consensus        88 ~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g----~~~~KdL~~L~~~dl~~viiiDd~~~~~~~~p-N  162 (372)
T 3ef0_A           88 SELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG----SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-N  162 (372)
T ss_dssp             HTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSS----CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-T
T ss_pred             hcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCC----CcceecHHHhcCCCCceEEEEeCCHHHcCCCC-c
Confidence            9999999999999999999999999998 7886665 99985    3589999987 999999999999999999998 9


Q ss_pred             eeeeCccC
Q 023829          243 GIPCIPFS  250 (276)
Q Consensus       243 gI~V~~f~  250 (276)
                      ||+|.+|.
T Consensus       163 ~I~i~~~~  170 (372)
T 3ef0_A          163 LIKVVPYE  170 (372)
T ss_dssp             EEECCCCC
T ss_pred             EeeeCCcc
Confidence            99999995

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.32  E-value=4.9e-13  Score=113.41  Aligned_cols=95  Identities=19%  Similarity=0.180  Sum_probs=84.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|.+. +.++|.|++.+..+..+++.++..++|..+++.+++...|+.  .|.+-++++|.++++||+
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  162 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVV  162 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEE
Confidence            45789999999999876 999999999999999999999999999999999888776665  688999999999999999


Q ss_pred             EEcCcccccCCCCCeeee
Q 023829          229 VDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V  246 (276)
                      |+|++.........|+..
T Consensus       163 VgDs~~Di~aA~~aG~~~  180 (216)
T 3kbb_A          163 FEDSKSGVEAAKSAGIER  180 (216)
T ss_dssp             EECSHHHHHHHHHTTCCC
T ss_pred             EecCHHHHHHHHHcCCcE
Confidence            999998887777778754

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.12  E-value=1.7e-10  Score=97.32  Aligned_cols=98  Identities=14%  Similarity=0.134  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---hhHHHHHHHhcCCCceeEEEECCCc----cccCCc--cccccccccCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---GYARPLVDRIDGENLFSLRLYRPST----TSTEYR--EHVKDLSCLSK  221 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~---~yA~~vl~~Ldp~~~f~~rl~r~~c----~~~k~~--~~~KdL~~L~r  221 (276)
                      +...||+.++|+.|.+. +.++|.|++..   ..++.+++.++...+|..+++.++.    ...|+.  .|.+-++.+|.
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~  112 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI  112 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence            45899999999999987 99999999887   8999999999999999999988764    344443  57788888999


Q ss_pred             CCCcEEEEEcC-cccccCCCCCeeeeCcc
Q 023829          222 DLCRTLIVDNN-PFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       222 d~~~~IiVDDs-p~~~~~~p~NgI~V~~f  249 (276)
                      +++++++|+|+ ..........|+.+.-+
T Consensus       113 ~~~~~l~VGD~~~~Di~~A~~aG~~~i~v  141 (189)
T 3ib6_A          113 DKTEAVMVGNTFESDIIGANRAGIHAIWL  141 (189)
T ss_dssp             CGGGEEEEESBTTTTHHHHHHTTCEEEEE
T ss_pred             CcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence            99999999999 57766666666665444

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.11  E-value=1.4e-10  Score=98.78  Aligned_cols=119  Identities=10%  Similarity=0.071  Sum_probs=94.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCC-cEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLC-RTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~-~~I  227 (276)
                      ....||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.+++ +++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v  181 (231)
T 3kzx_A          102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF  181 (231)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE
T ss_pred             ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE
Confidence            45899999999999987 999999999999999999999988899999998877665543  56778888999998 999


Q ss_pred             EEEcCcccccCCCCCeeeeCccCCCCC--CC---hHHhHHHHHHHHhh
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPFSAGQP--HD---NQVLTNVTLLKFLL  270 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f~~g~~--~D---~eL~~l~~~L~~La  270 (276)
                      +|+|++.........|+.+.-+..+..  .|   ..+.+|..+|+.+.
T Consensus       182 ~vGD~~~Di~~a~~aG~~~v~~~~~~~~~~~~~~~~~~el~~~l~~~l  229 (231)
T 3kzx_A          182 FIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDIRNFICQLI  229 (231)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEECC-----CCEEESSHHHHHHHHHHHH
T ss_pred             EEcCCHHHHHHHHHCCCeEEEECCCCCCCCceeeCCHHHHHHHHHHHh
Confidence            999999888777777876666643222  11   23666777776654

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.10  E-value=3.9e-12  Score=100.02  Aligned_cols=97  Identities=7%  Similarity=0.129  Sum_probs=82.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..||+.++|+.|++. +.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.+++++++|+
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg   98 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVD   98 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence            579999999999987 999999999999999999999888899998887766555544  56677788899999999999


Q ss_pred             cCcccccCCCCCeeeeCccC
Q 023829          231 NNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f~  250 (276)
                      |++........+|+..--+.
T Consensus        99 D~~~di~~a~~~G~~~i~~~  118 (137)
T 2pr7_A           99 DSILNVRGAVEAGLVGVYYQ  118 (137)
T ss_dssp             SCHHHHHHHHHHTCEEEECS
T ss_pred             CCHHHHHHHHHCCCEEEEeC
Confidence            99998777777888766664

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.10  E-value=1e-10  Score=98.38  Aligned_cols=99  Identities=17%  Similarity=0.160  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~-~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.|.+. +.++|.|++. ..+++.+++.++...+|..+.....   .+...+.+-++.+|.++++|++|
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~~~i  143 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG---SKITHFERLQQKTGIPFSQMIFF  143 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSS---CHHHHHHHHHHHHCCCGGGEEEE
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeC---chHHHHHHHHHHcCCChHHEEEE
Confidence            45799999999999987 9999999999 7999999999999889987644321   12235667778899999999999


Q ss_pred             EcCcccccCCCCCeeeeCccCCCC
Q 023829          230 DNNPFSFLLQPLNGIPCIPFSAGQ  253 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~~g~  253 (276)
                      +|++.........|+.+.-+..|.
T Consensus       144 gD~~~Di~~a~~aG~~~i~v~~g~  167 (187)
T 2wm8_A          144 DDERRNIVDVSKLGVTCIHIQNGM  167 (187)
T ss_dssp             ESCHHHHHHHHTTTCEEEECSSSC
T ss_pred             eCCccChHHHHHcCCEEEEECCCC
Confidence            999988877778899887765443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.10  E-value=1.1e-11  Score=108.43  Aligned_cols=116  Identities=11%  Similarity=0.115  Sum_probs=91.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..||+.++|+.|.+. +.+++.|++.  .++.+++.++...+|..+++.++....|+.  .|.+.++++|.++++||+|+
T Consensus        96 ~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~Vg  173 (243)
T 4g9b_A           96 VLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIE  173 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEE
T ss_pred             ccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEc
Confidence            689999999999876 9999999864  578889999999999999998888776665  68899999999999999999


Q ss_pred             cCcccccCCCCCeeeeCccCCCCC---------CChHHhHHHHHHHHhhh
Q 023829          231 NNPFSFLLQPLNGIPCIPFSAGQP---------HDNQVLTNVTLLKFLLS  271 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f~~g~~---------~D~eL~~l~~~L~~La~  271 (276)
                      |++.........|+.+.....|-.         .|-.+.++..+++.+++
T Consensus       174 Ds~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l~~  223 (243)
T 4g9b_A          174 DAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNVAE  223 (243)
T ss_dssp             SSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHHHH
Confidence            999988777778887665543321         12234456666666554

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.00  E-value=4.8e-11  Score=104.54  Aligned_cols=94  Identities=9%  Similarity=0.051  Sum_probs=79.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..||+.++|+.|++. +.+++-|+  ...+..+++.++..++|..+++.+++...|+.  .|.+.++++|.++++||+|+
T Consensus       117 ~~p~~~~ll~~Lk~~g~~i~i~~~--~~~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VG  194 (250)
T 4gib_A          117 ILPGIESLLIDVKSNNIKIGLSSA--SKNAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIE  194 (250)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCS--CTTHHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred             cchhHHHHHHHHHhcccccccccc--cchhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEEC
Confidence            679999999999977 77776544  35688899999999999999999888776665  68899999999999999999


Q ss_pred             cCcccccCCCCCeeeeCcc
Q 023829          231 NNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f  249 (276)
                      |++........+|+.+..+
T Consensus       195 Ds~~Di~aA~~aG~~~i~v  213 (250)
T 4gib_A          195 DASAGIDAINSANMFSVGV  213 (250)
T ss_dssp             SSHHHHHHHHHTTCEEEEE
T ss_pred             CCHHHHHHHHHcCCEEEEE
Confidence            9998887777788876655

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.98  E-value=6.6e-11  Score=100.56  Aligned_cols=97  Identities=14%  Similarity=0.148  Sum_probs=81.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.++|+.|++.+.++|.|++.+..++.+++.++...+|..+++.+  ...|+.  .|.+-++++|.++++|++|
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~v  160 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEEE
Confidence            457899999999998889999999999999999999999888999888776  333443  6788889999999999999


Q ss_pred             EcCcccccCCCCCeeeeCccC
Q 023829          230 DNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|++.........|+.+-.+.
T Consensus       161 gDs~~Di~~a~~aG~~~i~v~  181 (210)
T 2ah5_A          161 GDTKFDMLGARETGIQKLAIT  181 (210)
T ss_dssp             ESSHHHHHHHHHHTCEEEEES
T ss_pred             CCCHHHHHHHHHCCCcEEEEc
Confidence            999988877777788655443

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.98  E-value=1.2e-10  Score=96.66  Aligned_cols=98  Identities=10%  Similarity=0.121  Sum_probs=83.8

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ..+||+.++|+.+.+. +.++|.|++...+++.+++.++..++|..+++.+.+...++.  .+.+-++.+|.++++|+.|
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  168 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALII  168 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEE
Confidence            5789999999999987 999999999999999999999988999999998876655543  5677888899999999999


Q ss_pred             EcCcccccCCCCCeeeeCccC
Q 023829          230 DNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|+..-.......|+.+--+.
T Consensus       169 GD~~~Di~~a~~aG~~~~~~~  189 (214)
T 3e58_A          169 EDSEKGIAAGVAADVEVWAIR  189 (214)
T ss_dssp             ECSHHHHHHHHHTTCEEEEEC
T ss_pred             eccHhhHHHHHHCCCEEEEEC
Confidence            999887776666777665554

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.96  E-value=1e-09  Score=91.99  Aligned_cols=128  Identities=14%  Similarity=0.169  Sum_probs=91.5

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023829           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye  170 (276)
                      ...++++||+||||+..... .                |..         .+   .  -.+...||+.++|+.|.+. |.
T Consensus        12 ~~~k~~~~D~Dgtl~~~~~~-~----------------~~~---------~~---~--~~~~~~pg~~e~L~~L~~~G~~   60 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEPPS-D----------------FQV---------DR---F--DKLAFEPGVIPQLLKLQKAGYK   60 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC---C----------------CCC---------CS---G--GGCCBCTTHHHHHHHHHHTTEE
T ss_pred             CcCcEEEEeCCCCeEcCCCC-C----------------cCc---------CC---H--HHCcCCccHHHHHHHHHHCCCE
Confidence            46799999999999974210 0                000         00   0  0134789999999999987 99


Q ss_pred             EEEEccC---------------chhhHHHHHHHhcCCCceeEEEEC-----CCccccCCc--cccccccccCcCCCcEEE
Q 023829          171 LILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       171 lvI~Ts~---------------~~~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ++|.|++               ...+++.+++.++..  |..+++.     +++...|+.  .|.+-++.+|.+++++++
T Consensus        61 l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~  138 (176)
T 2fpr_A           61 LVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYV  138 (176)
T ss_dssp             EEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEE
T ss_pred             EEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEE
Confidence            9999999               678888999988766  8777654     555555443  577778889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccCCC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      |+|++.........|+...-+..+
T Consensus       139 VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          139 IGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             EESSHHHHHHHHHHTSEEEECBTT
T ss_pred             EcCCHHHHHHHHHcCCeEEEEcCC
Confidence            999998777777788887766533

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=98.96  E-value=1.3e-10  Score=99.06  Aligned_cols=98  Identities=17%  Similarity=0.124  Sum_probs=84.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ...||+.++|+.+.+. +.++|.|++...+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.++++|++|
T Consensus       104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~v  183 (237)
T 4ex6_A          104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVI  183 (237)
T ss_dssp             GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred             ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEE
Confidence            4789999999999987 999999999999999999999988899999998887665554  5677888899999999999


Q ss_pred             EcCcccccCCCCCeeeeCccC
Q 023829          230 DNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|+..-.......|+.+..+.
T Consensus       184 GD~~~Di~~a~~aG~~~i~v~  204 (237)
T 4ex6_A          184 GDGVPDAEMGRAAGMTVIGVS  204 (237)
T ss_dssp             ESSHHHHHHHHHTTCEEEEES
T ss_pred             cCCHHHHHHHHHCCCeEEEEe
Confidence            999988877777788555443

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=98.94  E-value=2.4e-10  Score=96.56  Aligned_cols=98  Identities=10%  Similarity=0.168  Sum_probs=83.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.+.+. +.++|.|++...+++.+++.++...+|..+++.+.....++.  .+.+-++.+|.++++|++
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~  164 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIM  164 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEE
Confidence            35889999999999987 999999999999999999999988899999998877655544  567778889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |+|+..-.......|+.+-..
T Consensus       165 iGD~~~Di~~a~~aG~~~i~v  185 (226)
T 3mc1_A          165 IGDREYDVIGALKNNLPSIGV  185 (226)
T ss_dssp             EESSHHHHHHHHTTTCCEEEE
T ss_pred             ECCCHHHHHHHHHCCCCEEEE
Confidence            999998887777788844443

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=98.93  E-value=2.1e-10  Score=98.77  Aligned_cols=100  Identities=14%  Similarity=0.123  Sum_probs=84.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce--eEEEECCCccccCCc--cccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF--SLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f--~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~  226 (276)
                      ....||+.++|+.|.+. +.++|.|++....+...++. +...+|  ..+++.+.+...++.  .+.+-++.+|.++++|
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  186 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA  186 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence            45789999999999987 99999999999999999998 888899  888888877655544  5778888999999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccCCC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      |+|+|+..-.......|+.+.-+..|
T Consensus       187 i~vGD~~~Di~~a~~aG~~~i~v~~~  212 (243)
T 3qxg_A          187 VVIENAPLGVEAGHKAGIFTIAVNTG  212 (243)
T ss_dssp             EEEECSHHHHHHHHHTTCEEEEECCS
T ss_pred             EEEeCCHHHHHHHHHCCCEEEEEeCC
Confidence            99999998887777788766555433

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.91  E-value=4.2e-10  Score=94.55  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=80.3

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce--eEEEECCCccccCCc--cccccccccCcCCCc
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF--SLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f--~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~  225 (276)
                      .....||+.++|+.+.+. +.++|.|++...+++.+++.++...+|  ..+++.+. ...++.  .+.+-++.+|.++++
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~~~  146 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSPSR  146 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCHHH
Confidence            356899999999999987 999999999999999999999988888  77777665 333333  567778889999999


Q ss_pred             EEEEEcCcccccCCCCCeeeeCccC
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |++|+|+..-.......|+...-+.
T Consensus       147 ~i~iGD~~~Di~~a~~aG~~~i~v~  171 (205)
T 3m9l_A          147 MVMVGDYRFDLDCGRAAGTRTVLVN  171 (205)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEECS
T ss_pred             EEEECCCHHHHHHHHHcCCEEEEEe
Confidence            9999999987766666666444443

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.91  E-value=2.7e-10  Score=97.32  Aligned_cols=98  Identities=14%  Similarity=0.112  Sum_probs=79.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce--eEEEECCCccccCCc--cccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF--SLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f--~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~  226 (276)
                      ....||+.++|+.+.+. +.++|.|++...+++..++. +...+|  ..+++.+.+...++.  .+.+-++.+|.++++|
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  185 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA  185 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence            45789999999999987 99999999999999999998 888899  888888876655544  4778888899999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |.|+|+..-.......|+.+--+.
T Consensus       186 i~vGD~~~Di~~a~~aG~~~i~v~  209 (247)
T 3dv9_A          186 LVIENAPLGVQAGVAAGIFTIAVN  209 (247)
T ss_dssp             EEEECSHHHHHHHHHTTSEEEEEC
T ss_pred             EEEeCCHHHHHHHHHCCCeEEEEc
Confidence            999999988777777786655544

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=98.91  E-value=1.4e-10  Score=102.57  Aligned_cols=93  Identities=12%  Similarity=0.105  Sum_probs=80.2

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.|++.+.++|.|++....++.+++.++...+|..+++.+++...|+.  .|.+-++.+|.++++|++|
T Consensus       120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v  199 (260)
T 2gfh_A          120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV  199 (260)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence            34679999999999988999999999999999999999999999999998887666654  5778888999999999999


Q ss_pred             EcC-cccccCCCCCee
Q 023829          230 DNN-PFSFLLQPLNGI  244 (276)
Q Consensus       230 DDs-p~~~~~~p~NgI  244 (276)
                      +|+ ..........|+
T Consensus       200 GDs~~~Di~~A~~aG~  215 (260)
T 2gfh_A          200 GDTLETDIQGGLNAGL  215 (260)
T ss_dssp             ESCTTTHHHHHHHTTC
T ss_pred             CCCchhhHHHHHHCCC
Confidence            996 776665556666

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=98.90  E-value=4.9e-10  Score=95.90  Aligned_cols=94  Identities=17%  Similarity=0.176  Sum_probs=79.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..+++.+++...|+.  .+.+-++.+|.+++++++
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  161 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI  161 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence            45899999999999987 999999999999999999999888899999988876655543  566777888999999999


Q ss_pred             EEcCcccccCCCCCeee
Q 023829          229 VDNNPFSFLLQPLNGIP  245 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~  245 (276)
                      |+|+..........|+.
T Consensus       162 vGD~~~Di~~a~~aG~~  178 (222)
T 2nyv_A          162 VGDTDADIEAGKRAGTK  178 (222)
T ss_dssp             EESSHHHHHHHHHHTCE
T ss_pred             ECCCHHHHHHHHHCCCe
Confidence            99998877665556665

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.90  E-value=2.6e-10  Score=96.78  Aligned_cols=97  Identities=15%  Similarity=0.086  Sum_probs=82.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|.+. +.++|.|++....++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF  177 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence            45789999999999988 999999999999999999999988999999998887766654  577788889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|+..........|+.+--
T Consensus       178 vGD~~~Di~~a~~~G~~~~~  197 (233)
T 3umb_A          178 VSSNGWDACGATWHGFTTFW  197 (233)
T ss_dssp             EESCHHHHHHHHHHTCEEEE
T ss_pred             EeCCHHHHHHHHHcCCEEEE
Confidence            99998766555556665544

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=98.89  E-value=3.2e-10  Score=98.10  Aligned_cols=97  Identities=12%  Similarity=0.113  Sum_probs=82.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++. +.++|.|++....++.+++.++.. +|..+++.+.+...|+.  .+.+-++.+|.++++|++
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~  187 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVY  187 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            45789999999999876 999999999999999999999887 89999988876655544  577888899999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |.|++.-.......|+.+..+
T Consensus       188 vGDs~~Di~~a~~aG~~~v~v  208 (240)
T 2hi0_A          188 IGDSEIDIQTARNSEMDEIAV  208 (240)
T ss_dssp             EESSHHHHHHHHHTTCEEEEE
T ss_pred             EcCCHHHHHHHHHCCCeEEEE
Confidence            999998877777778764333

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.88  E-value=1.2e-09  Score=90.41  Aligned_cols=97  Identities=9%  Similarity=0.009  Sum_probs=74.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEE-----CCCccccCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLY-----RPSTTSTEYR  210 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~---------------~yA~~vl~~Ldp~~~f~~rl~-----r~~c~~~k~~  210 (276)
                      +...||+.++|+.|++. +.++|.|++..               ++++.+++.++  .+|...++     .+.+...|+.
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~  103 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPL  103 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTS
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCC
Confidence            34789999999999988 99999999987               66777777776  45666554     3455544443


Q ss_pred             --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                        .+.+-++.+|.+++++++|+|+..-.......|+.+--+.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~  145 (179)
T 3l8h_A          104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQ  145 (179)
T ss_dssp             SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEEC
Confidence              5778888899999999999999987777777787554443

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=98.88  E-value=3.6e-10  Score=96.88  Aligned_cols=102  Identities=14%  Similarity=0.084  Sum_probs=85.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcC-CCcEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd-~~~~I  227 (276)
                      ...+||+.++|+.+.+. +.++|.|++...+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.+ +++|+
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  188 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI  188 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence            45899999999999988 999999999999999999999998999999998887665544  466778888999 99999


Q ss_pred             EEEcCcccccCCCCCeeeeCccCCCC
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPFSAGQ  253 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f~~g~  253 (276)
                      +|+|++.........|+.+--+..|.
T Consensus       189 ~vGD~~~Di~~a~~aG~~~i~v~~g~  214 (240)
T 3sd7_A          189 MVGDRKYDIIGAKKIGIDSIGVLYGY  214 (240)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEESSSS
T ss_pred             EECCCHHHHHHHHHCCCCEEEEeCCC
Confidence            99999987776667777544443233

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=98.87  E-value=2.3e-10  Score=96.71  Aligned_cols=98  Identities=11%  Similarity=0.063  Sum_probs=83.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.+.+. +.++|.|++...+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.++++|+.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~  169 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLV  169 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEE
Confidence            46899999999999987 999999999999999999999888899999888876655543  577888889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |+|+..-.......|+.+--+
T Consensus       170 iGD~~~Di~~a~~aG~~~i~v  190 (233)
T 3s6j_A          170 IGDAIWDMLAARRCKATGVGL  190 (233)
T ss_dssp             EESSHHHHHHHHHTTCEEEEE
T ss_pred             EeCCHHhHHHHHHCCCEEEEE
Confidence            999998877766777744443

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=98.87  E-value=1.8e-09  Score=92.03  Aligned_cols=115  Identities=11%  Similarity=0.039  Sum_probs=81.2

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      .+...||+.++|+.|++. +.++|.|++.. .++.+++.++..++|..+++.+++...|+.  .+.+-++.+|.++   +
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~  168 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---V  168 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---E
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---E
Confidence            356899999999999987 99999999977 589999999988899999988877655543  5677788888777   9


Q ss_pred             EEEcCcc-cccCCCCCeeeeCccCCC-CCC--C---hHHhHHHHHHHHh
Q 023829          228 IVDNNPF-SFLLQPLNGIPCIPFSAG-QPH--D---NQVLTNVTLLKFL  269 (276)
Q Consensus       228 iVDDsp~-~~~~~p~NgI~V~~f~~g-~~~--D---~eL~~l~~~L~~L  269 (276)
                      +|+|++. ........|+.+--+..+ ...  +   +.|.++..+|+.+
T Consensus       169 ~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~el~~~l~~~  217 (220)
T 2zg6_A          169 HVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEM  217 (220)
T ss_dssp             EEESSCCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHHHHHHHHHHH
T ss_pred             EEcCCchHhHHHHHHCCCeEEEECCCCCCCCcceEECCHHHHHHHHHHh
Confidence            9999998 888888888876655322 111  1   2456666666554

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=98.85  E-value=4.8e-10  Score=95.08  Aligned_cols=98  Identities=13%  Similarity=0.014  Sum_probs=81.8

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccC-cCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLS-KDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~-rd~~~~Ii  228 (276)
                      ....||+.++|+.+.+.+.++|.|++....++.+++.++...+|..+++.+.+...|+.  .+.+-++.+| .+++++++
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~  181 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLI  181 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEE
Confidence            45789999999999977999999999999999999999888899999998877666554  5677888899 99999999


Q ss_pred             EEcCc-ccccCCCCCeeeeCcc
Q 023829          229 VDNNP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~V~~f  249 (276)
                      |+|+. .-.......|+.+.-+
T Consensus       182 vGD~~~~Di~~a~~aG~~~i~~  203 (238)
T 3ed5_A          182 IGDSLTADIKGGQLAGLDTCWM  203 (238)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEE
T ss_pred             ECCCcHHHHHHHHHCCCEEEEE
Confidence            99998 6666555666654333

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.84  E-value=1.1e-10  Score=98.08  Aligned_cols=101  Identities=9%  Similarity=-0.040  Sum_probs=85.4

Q ss_pred             EEeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHH------hcCCCceeEEEECCCccccCCc--cccccccccCcC
Q 023829          151 TVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDR------IDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD  222 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~------Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd  222 (276)
                      .....||+.++|+.|.+.+.++|.|++...+++.+++.      ++...+|..+++.+.+...|+.  .+.+-++.+|.+
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  166 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK  166 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence            35688999999999998899999999999999999888      5666789999887776655554  567778889999


Q ss_pred             CCcEEEEEcCcccccCCCCCeeeeCccCC
Q 023829          223 LCRTLIVDNNPFSFLLQPLNGIPCIPFSA  251 (276)
Q Consensus       223 ~~~~IiVDDsp~~~~~~p~NgI~V~~f~~  251 (276)
                      +++|++|+|++.........|+.+--+..
T Consensus       167 ~~~~~~igD~~~Di~~a~~aG~~~~~~~~  195 (211)
T 2i6x_A          167 PEETLFIDDGPANVATAERLGFHTYCPDN  195 (211)
T ss_dssp             GGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred             hHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence            99999999999988777788998877753

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.84  E-value=2.2e-09  Score=90.67  Aligned_cols=97  Identities=14%  Similarity=0.058  Sum_probs=81.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.+.+. +.++|.|++....++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  174 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF  174 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence            44789999999999988 999999999999999999999988899999998877665554  567788889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|+..-.......|+.+--
T Consensus       175 iGD~~~Di~~a~~aG~~~~~  194 (230)
T 3um9_A          175 VSCNSWDATGAKYFGYPVCW  194 (230)
T ss_dssp             EESCHHHHHHHHHHTCCEEE
T ss_pred             EeCCHHHHHHHHHCCCEEEE
Confidence            99999766555555655444

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=98.84  E-value=5.7e-10  Score=94.54  Aligned_cols=121  Identities=15%  Similarity=0.042  Sum_probs=91.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.++|+.+.+.+.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|+.|
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v  178 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV  178 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence            45789999999999977999999999999999999999988899999988776655554  4777888899999999999


Q ss_pred             EcCc-ccccCCCCCeeeeCccCCCCCC-------C---hHHhHHHHHHHHhhhc
Q 023829          230 DNNP-FSFLLQPLNGIPCIPFSAGQPH-------D---NQVLTNVTLLKFLLSS  272 (276)
Q Consensus       230 DDsp-~~~~~~p~NgI~V~~f~~g~~~-------D---~eL~~l~~~L~~La~~  272 (276)
                      +|+. .-.......|+.+--+..|+..       |   ..+.++..+|+.+...
T Consensus       179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~~~  232 (234)
T 3u26_A          179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELNGQ  232 (234)
T ss_dssp             ESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC--
T ss_pred             cCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHHhhc
Confidence            9998 6566666677544443322211       1   2345667777776543

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=98.84  E-value=2.3e-10  Score=96.11  Aligned_cols=97  Identities=9%  Similarity=-0.008  Sum_probs=81.8

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCC--ccccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~--~~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.++|+.+.+.+.++|.|++...+++.+++.++...+|..+++.+.+...|+  ..+.+-++.+|.+++++++|
T Consensus        82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~v  161 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI  161 (209)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence            4589999999999986699999999999999999999888889999998887766663  35677788899999999999


Q ss_pred             EcCcccccCCCCCeeeeCc
Q 023829          230 DNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~  248 (276)
                      +|+..-.......|+.+--
T Consensus       162 GD~~~Di~~a~~aG~~~~~  180 (209)
T 2hdo_A          162 GDSVSDEQTAQAANVDFGL  180 (209)
T ss_dssp             ESSHHHHHHHHHHTCEEEE
T ss_pred             CCChhhHHHHHHcCCeEEE
Confidence            9998877666666766554

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=98.84  E-value=4.7e-10  Score=97.48  Aligned_cols=96  Identities=16%  Similarity=0.086  Sum_probs=80.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ...+||+.++|+.|.+. +.++|.|++....++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  192 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  192 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence            45789999999999987 999999999999999999999888899999888877655544  466677888999999999


Q ss_pred             EEcCcccccCCCCCeeeeC
Q 023829          229 VDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~  247 (276)
                      |+|+..-.......|+.+-
T Consensus       193 vGD~~~Di~~a~~aG~~~i  211 (243)
T 2hsz_A          193 VGDSQNDIFAAHSAGCAVV  211 (243)
T ss_dssp             EESSHHHHHHHHHHTCEEE
T ss_pred             EcCCHHHHHHHHHCCCeEE
Confidence            9999977766555666543

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.83  E-value=1.7e-09  Score=92.04  Aligned_cols=97  Identities=14%  Similarity=0.068  Sum_probs=80.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  173 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  173 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            45789999999999987 999999999999999999999888899999998877665554  466777889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|+..-.......|+.+--
T Consensus       174 iGD~~~Di~~a~~aG~~~~~  193 (232)
T 1zrn_A          174 VASNAWDATGARYFGFPTCW  193 (232)
T ss_dssp             EESCHHHHHHHHHHTCCEEE
T ss_pred             EeCCHHHHHHHHHcCCEEEE
Confidence            99999665544455554433

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.83  E-value=4e-09  Score=88.57  Aligned_cols=96  Identities=16%  Similarity=0.107  Sum_probs=77.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC-----------c-cccCCccccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS-----------T-TSTEYREHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~-----------c-~~~k~~~~~KdL~~  218 (276)
                      +..+||+.++|+.+.+. +.++|.|++...+++.+++.++...+|..++..++           + ...+...+.+-++.
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~  153 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL  153 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence            45899999999999988 99999999999999999999998888887764333           1 11111246677788


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      +|.++++++.|+|++.-.......|+.+-
T Consensus       154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~  182 (217)
T 3m1y_A          154 LNISKTNTLVVGDGANDLSMFKHAHIKIA  182 (217)
T ss_dssp             HTCCSTTEEEEECSGGGHHHHTTCSEEEE
T ss_pred             cCCCHhHEEEEeCCHHHHHHHHHCCCeEE
Confidence            89999999999999988877777888764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=98.83  E-value=1.4e-09  Score=92.02  Aligned_cols=98  Identities=14%  Similarity=0.129  Sum_probs=77.8

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccC-Cc--cccccccccC--cCCC
Q 023829          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTE-YR--EHVKDLSCLS--KDLC  224 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k-~~--~~~KdL~~L~--rd~~  224 (276)
                      ....||+.++|+.+.+.  +.++|.|++...+++.+++.++...+|....+.++..... ..  .+.+-++.+|  .+++
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~  171 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  171 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcc
Confidence            56789999999999986  9999999999999999999998888898777766543211 11  2455567788  8999


Q ss_pred             cEEEEEcCcccccCCCCCeeeeCcc
Q 023829          225 RTLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       225 ~~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      +|++|+|++.-.......|+.+-.+
T Consensus       172 ~~i~iGD~~~Di~~a~~aG~~~i~v  196 (234)
T 2hcf_A          172 QIVIIGDTEHDIRCARELDARSIAV  196 (234)
T ss_dssp             GEEEEESSHHHHHHHHTTTCEEEEE
T ss_pred             cEEEECCCHHHHHHHHHCCCcEEEE
Confidence            9999999998877777778654443

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.82  E-value=7.6e-10  Score=95.04  Aligned_cols=93  Identities=11%  Similarity=0.016  Sum_probs=78.0

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ..+||+.++|+.+.+. +.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++|
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i  184 (240)
T 2no4_A          105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFV  184 (240)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            4679999999999987 999999999999999999999888899999988877655554  5667788899999999999


Q ss_pred             EcCcccccCCCCCeee
Q 023829          230 DNNPFSFLLQPLNGIP  245 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~  245 (276)
                      +|+..-.......|+.
T Consensus       185 GD~~~Di~~a~~aG~~  200 (240)
T 2no4_A          185 SSNAWDLGGAGKFGFN  200 (240)
T ss_dssp             ESCHHHHHHHHHHTCE
T ss_pred             eCCHHHHHHHHHCCCE
Confidence            9998665544455543

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.82  E-value=4.3e-10  Score=95.27  Aligned_cols=99  Identities=13%  Similarity=0.096  Sum_probs=83.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.++|+.+.+.+.++|.|++....++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.++++||+|
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i  185 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMI  185 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            45789999999999966999999999999999999999988899999998877665554  5677888899999999999


Q ss_pred             EcCc-ccccCCCCCeeeeCccC
Q 023829          230 DNNP-FSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       230 DDsp-~~~~~~p~NgI~V~~f~  250 (276)
                      +|++ .-.......|+.+--..
T Consensus       186 GD~~~~Di~~a~~aG~~~~~~~  207 (240)
T 3qnm_A          186 GDSWEADITGAHGVGMHQAFYN  207 (240)
T ss_dssp             ESCTTTTHHHHHHTTCEEEEEC
T ss_pred             CCCchHhHHHHHHcCCeEEEEc
Confidence            9996 76666666677665554

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.79  E-value=2.6e-09  Score=89.33  Aligned_cols=94  Identities=16%  Similarity=0.129  Sum_probs=78.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.+ |+.|++.+.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|  ++++++|
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~v  149 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLV  149 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEEE
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEEE
Confidence            357899999 9999855999999999999999999999988899999988877665544  4666777888  8999999


Q ss_pred             EcCcccccCCCCCeeeeCc
Q 023829          230 DNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~  248 (276)
                      +|++.........|+.+--
T Consensus       150 GD~~~Di~~a~~aG~~~~~  168 (201)
T 2w43_A          150 SSNAFDVIGAKNAGMRSIF  168 (201)
T ss_dssp             ESCHHHHHHHHHTTCEEEE
T ss_pred             eCCHHHhHHHHHCCCEEEE
Confidence            9999877666667776544

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.79  E-value=7.5e-09  Score=88.82  Aligned_cols=92  Identities=10%  Similarity=0.065  Sum_probs=71.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc---------------hhhHHHHHHHhcCCCceeEEEEC------------CCc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGL---------------EGYARPLVDRIDGENLFSLRLYR------------PST  204 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~---------------~~yA~~vl~~Ldp~~~f~~rl~r------------~~c  204 (276)
                      ...||+.++|+.|.+. +.++|.|++.               ..+++.+++.++..  |..+++.            +.+
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~  127 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVC  127 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCC
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccC
Confidence            4689999999999987 9999999999               57888999888765  6665543            234


Q ss_pred             cccCCc--cccccccccCcCCCcEEEEEcCcccccCCCCCeeee
Q 023829          205 TSTEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       205 ~~~k~~--~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      ...|+.  .+.+-++.+|.+++++++|+|+..-.......|+..
T Consensus       128 ~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~  171 (211)
T 2gmw_A          128 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGT  171 (211)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred             cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCce
Confidence            334433  566777888999999999999998777666677543

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.78  E-value=2.3e-09  Score=93.18  Aligned_cols=95  Identities=14%  Similarity=0.082  Sum_probs=79.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.+. .+.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++|
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v  170 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV  170 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence            357899999999999 9999999999999999999999888899999998887666655  5677788899999999999


Q ss_pred             EcCcccccCCCCCeeeeC
Q 023829          230 DNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~  247 (276)
                      +|+..-.......|+.+-
T Consensus       171 GD~~~Di~~a~~aG~~~~  188 (253)
T 1qq5_A          171 SSNGFDVGGAKNFGFSVA  188 (253)
T ss_dssp             ESCHHHHHHHHHHTCEEE
T ss_pred             eCChhhHHHHHHCCCEEE
Confidence            999866555545555443

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=98.76  E-value=5.2e-10  Score=95.12  Aligned_cols=94  Identities=12%  Similarity=0.088  Sum_probs=73.2

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..||+.++|+.|.+. +.++|.|++..  ++.+++.++..++|..+++.+.+...|+.  .+.+-++.+|.++++||+|+
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vG  170 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIE  170 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEe
Confidence            589999999999988 99999999854  88999999988999999888876655543  57788888999999999999


Q ss_pred             cCcccccCCCCCeeeeCcc
Q 023829          231 NNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f  249 (276)
                      |+..-.......|+.+--.
T Consensus       171 Ds~~Di~~a~~aG~~~~~~  189 (233)
T 3nas_A          171 DAEAGISAIKSAGMFAVGV  189 (233)
T ss_dssp             CSHHHHHHHHHTTCEEEEC
T ss_pred             CCHHHHHHHHHcCCEEEEE
Confidence            9998776666667765554

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=98.75  E-value=8.9e-09  Score=90.40  Aligned_cols=120  Identities=12%  Similarity=0.019  Sum_probs=93.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|.+. +.++|.|++.. .++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++||+
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~  183 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAH  183 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            46899999999999987 99999999877 478999999888899999888877655554  577888889999999999


Q ss_pred             EEcCc-ccccCCCCCeeeeCccCCCCCCCh-------------HHhHHHHHHHHhhhc
Q 023829          229 VDNNP-FSFLLQPLNGIPCIPFSAGQPHDN-------------QVLTNVTLLKFLLSS  272 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~V~~f~~g~~~D~-------------eL~~l~~~L~~La~~  272 (276)
                      |+|++ .-+......|+.+.-+..+.....             .|.+|..+|+.+..+
T Consensus       184 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~  241 (263)
T 3k1z_A          184 VGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLEGS  241 (263)
T ss_dssp             EESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHHHC
T ss_pred             ECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHHhc
Confidence            99997 667666677887776654432221             245677777776554

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.74  E-value=3.3e-09  Score=90.68  Aligned_cols=93  Identities=16%  Similarity=0.124  Sum_probs=72.3

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCC-CcEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDL-CRTLI  228 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~-~~~Ii  228 (276)
                      ...||+.++|+.|++. +.++|.|+..+..+..+++     .+|..+++.+++...|+.  .+.+.++.+|.++ ++||+
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-----~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~  110 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-----PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVL  110 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-----TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEE
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-----ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEE
Confidence            3679999999999876 9999999998887754443     456777777776655544  5778888999865 89999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |.|++.-......+|+.+.-+.
T Consensus       111 VGDs~~Di~aA~~aG~~~i~v~  132 (196)
T 2oda_A          111 ISGDPRLLQSGLNAGLWTIGLA  132 (196)
T ss_dssp             EESCHHHHHHHHHHTCEEEEES
T ss_pred             EeCCHHHHHHHHHCCCEEEEEc
Confidence            9999988777777787665443

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.74  E-value=2e-09  Score=93.42  Aligned_cols=98  Identities=12%  Similarity=-0.018  Sum_probs=82.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEEECCCccccCCc--cccccccccCcCC-CcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRLYRPSTTSTEYR--EHVKDLSCLSKDL-CRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~-f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~-~~~  226 (276)
                      ....||+.++|+.+.+. +.++|.|++....++.+++.++..++ |..+++.+.+...++.  .+.+-++.+|.++ ++|
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            35789999999999987 99999999999999999999988887 8888888876655544  5677888899999 999


Q ss_pred             EEEEcCcccccCCCCCeeeeCcc
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |+|.|+..-.......|+.+.-+
T Consensus       190 i~vGD~~~Di~~a~~aG~~~v~v  212 (277)
T 3iru_A          190 IKVDDTLPGIEEGLRAGMWTVGV  212 (277)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEE
T ss_pred             EEEcCCHHHHHHHHHCCCeEEEE
Confidence            99999998777666777654444

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=98.73  E-value=1.2e-08  Score=90.01  Aligned_cols=93  Identities=16%  Similarity=0.106  Sum_probs=78.3

Q ss_pred             EeeCccHHHHHHHhhhc-c--eEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccc----cCCc--cccccccccCcC
Q 023829          152 VFERPGLREFLKQLSEF-A--DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS----TEYR--EHVKDLSCLSKD  222 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-y--elvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~----~k~~--~~~KdL~~L~rd  222 (276)
                      +...||+.++|+.+.+. +  .++|.|++...+++.+++.++...+|..+++.+.+..    .|+.  .+.+-++.+|.+
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~  220 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA  220 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCC
Confidence            45799999999999986 8  9999999999999999999999999999988765432    2332  567778889999


Q ss_pred             C-CcEEEEEcCcccccCCCCCee
Q 023829          223 L-CRTLIVDNNPFSFLLQPLNGI  244 (276)
Q Consensus       223 ~-~~~IiVDDsp~~~~~~p~NgI  244 (276)
                      + ++||+|+|+..-.......|+
T Consensus       221 ~~~~~i~vGD~~~Di~~a~~aG~  243 (282)
T 3nuq_A          221 RYENAYFIDDSGKNIETGIKLGM  243 (282)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTC
T ss_pred             CcccEEEEcCCHHHHHHHHHCCC
Confidence            8 999999999988776666677

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.73  E-value=2.3e-09  Score=93.06  Aligned_cols=98  Identities=10%  Similarity=-0.074  Sum_probs=82.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeE-EEECCCcc-ccCCc--cccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSL-RLYRPSTT-STEYR--EHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~-rl~r~~c~-~~k~~--~~~KdL~~L~rd~~~~  226 (276)
                      ....||+.++|+.+.+. +.++|.|++...+++.+++.++..++|.. +++.+.+. ..|+.  .+.+-++.+|.++++|
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  188 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC  188 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence            56899999999999986 99999999999999999999988888988 77777765 55543  5677888899999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCcc
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      ++|+|+..-.......|+.+--+
T Consensus       189 i~iGD~~~Di~~a~~aG~~~i~v  211 (259)
T 4eek_A          189 VVIEDSVTGGAAGLAAGATLWGL  211 (259)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEE
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEE
Confidence            99999998777666677764444

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.72  E-value=1.9e-09  Score=90.58  Aligned_cols=96  Identities=10%  Similarity=0.112  Sum_probs=77.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee-EEEECCCcc-----ccCCccccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTT-----STEYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~-~rl~r~~c~-----~~k~~~~~KdL~~L~rd~~~  225 (276)
                      +..+||+.++|+.|.+.+.++|.|++...+++.+++.++...+|. ...+.++..     ..++..+.+-++.++.++++
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~  147 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  147 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence            457999999999999779999999999999999999999888894 555544432     12334567778888888999


Q ss_pred             EEEEEcCcccccCCCCCeeeeC
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      |++|+|+..-.......|+.+-
T Consensus       148 ~~~iGD~~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          148 VIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             EEEEECSSTTHHHHHHSSEEEE
T ss_pred             EEEEeCChhhHHHHHhcCccEE
Confidence            9999999988776667787654

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=98.70  E-value=1.4e-09  Score=93.84  Aligned_cols=99  Identities=13%  Similarity=0.089  Sum_probs=79.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH-hcCCCceeEEEECC--CccccCCc--cccccccccCcCC--
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR-IDGENLFSLRLYRP--STTSTEYR--EHVKDLSCLSKDL--  223 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~-Ldp~~~f~~rl~r~--~c~~~k~~--~~~KdL~~L~rd~--  223 (276)
                      ....||+.++|+.|++. +.++|.|++....++..+.. ++...+|..+++.+  .+...|+.  .+.+-++.+|.++  
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  190 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAM  190 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCG
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCc
Confidence            45899999999999988 99999999998887776643 45556888888887  66555544  5778888899887  


Q ss_pred             CcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          224 CRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       224 ~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++||+|+|+..........|+.+--+.
T Consensus       191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~  217 (250)
T 3l5k_A          191 EKCLVFEDAPNGVEAALAAGMQVVMVP  217 (250)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred             ceEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence            999999999988777777886655554

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=98.69  E-value=8.6e-09  Score=86.17  Aligned_cols=98  Identities=12%  Similarity=0.019  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....|++.++|+.+.+. +.++|.|++...+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.++++++.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~  172 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  172 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            34789999999999987 999999999999999999998888889999888876655533  456677888999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |.|+..-.......|+.+--+
T Consensus       173 iGD~~nDi~~a~~aG~~~~~~  193 (226)
T 1te2_A          173 LEDSVNGMIASKAARMRSIVV  193 (226)
T ss_dssp             EESSHHHHHHHHHTTCEEEEC
T ss_pred             EeCCHHHHHHHHHcCCEEEEE
Confidence            999998776666667765554

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.67  E-value=3.8e-09  Score=90.31  Aligned_cols=98  Identities=11%  Similarity=-0.027  Sum_probs=82.7

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh---cCC---CceeEEEECCCccccCCc--cccccccccCcCCCc
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI---DGE---NLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~L---dp~---~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~  225 (276)
                      ..||+.++|+.|.+.+.++|.|++....++.+++.+   ...   .+|..+++.+.+...|+.  .|.+-++.+|.++++
T Consensus       113 ~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~  192 (229)
T 4dcc_A          113 IPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKE  192 (229)
T ss_dssp             CCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             ccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            579999999999988999999999999999888666   333   468888888877766664  577888899999999


Q ss_pred             EEEEEcCcccccCCCCCeeeeCccCC
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCIPFSA  251 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~~f~~  251 (276)
                      ||+|+|++.........|+.+.-+..
T Consensus       193 ~~~vGD~~~Di~~a~~aG~~~i~v~~  218 (229)
T 4dcc_A          193 TFFIDDSEINCKVAQELGISTYTPKA  218 (229)
T ss_dssp             EEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred             eEEECCCHHHHHHHHHcCCEEEEECC
Confidence            99999999888878888998877753

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=98.67  E-value=3.9e-09  Score=87.91  Aligned_cols=98  Identities=7%  Similarity=0.001  Sum_probs=83.0

Q ss_pred             eeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ...||+.++|+.+++...++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++|+
T Consensus        86 ~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg  165 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVD  165 (200)
T ss_dssp             CBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             ccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEeC
Confidence            3789999999999876699999999999999999999888889888887766555554  56677888999999999999


Q ss_pred             cCcccccCCCCCeeeeCccC
Q 023829          231 NNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f~  250 (276)
                      |++.........|+.+--+.
T Consensus       166 D~~~Di~~a~~aG~~~~~~~  185 (200)
T 3cnh_A          166 DRLQNVQAARAVGMHAVQCV  185 (200)
T ss_dssp             SCHHHHHHHHHTTCEEEECS
T ss_pred             CCHHHHHHHHHCCCEEEEEC
Confidence            99998877777888876664

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=98.67  E-value=2.2e-09  Score=90.63  Aligned_cols=95  Identities=11%  Similarity=-0.026  Sum_probs=75.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--ccccc---ccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKD---LSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~Kd---L~~L~rd~~~~  226 (276)
                      ....||+.++|+.+++.+.++|.|++....++.+++.+.  .+|..+++.+++...|+.  .|.+-   ++.+|.++++|
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~--~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~  175 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG--VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDI  175 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC--SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGE
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC--CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhE
Confidence            357899999999999889999999999999999988744  578988888776665554  33344   78899999999


Q ss_pred             EEEEcCc-ccccCCCCCeeeeCc
Q 023829          227 LIVDNNP-FSFLLQPLNGIPCIP  248 (276)
Q Consensus       227 IiVDDsp-~~~~~~p~NgI~V~~  248 (276)
                      |+|+|++ .........|+.+--
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~~  198 (240)
T 3smv_A          176 LHTAESLYHDHIPANDAGLVSAW  198 (240)
T ss_dssp             EEEESCTTTTHHHHHHHTCEEEE
T ss_pred             EEECCCchhhhHHHHHcCCeEEE
Confidence            9999996 666555555665443

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.63  E-value=3.4e-09  Score=88.62  Aligned_cols=97  Identities=8%  Similarity=0.021  Sum_probs=78.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....|++.++|+.+.+. +.+++.|++...+++.+++.++...+|...++.+.+...++.  .+.+-++.+|.++++++.
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~  167 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLY  167 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEE
Confidence            34689999999999876 999999999999999999998877888888887765544432  456677888999999999


Q ss_pred             EEcCcccccCCCCCeeeeCc
Q 023829          229 VDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~  248 (276)
                      |+|+..-.......|+.+--
T Consensus       168 iGD~~nDi~~~~~aG~~~~~  187 (225)
T 3d6j_A          168 IGDSTVDAGTAAAAGVSFTG  187 (225)
T ss_dssp             EESSHHHHHHHHHHTCEEEE
T ss_pred             EcCCHHHHHHHHHCCCeEEE
Confidence            99999877665556665544

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=98.60  E-value=4.7e-09  Score=87.85  Aligned_cols=95  Identities=13%  Similarity=0.115  Sum_probs=77.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ...||+.++|+.+.+. +.++|.|++  ..++.+++.++...+|...++.+.+...|+.  .+.+-++.+|.++++|+.|
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i  168 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL  168 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence            4679999999999986 999999998  6788889988888889998888877665554  5667778899999999999


Q ss_pred             EcCcccccCCCCCeeeeCcc
Q 023829          230 DNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f  249 (276)
                      +|+..-.......|+.+--.
T Consensus       169 GD~~nDi~~a~~aG~~~~~~  188 (221)
T 2wf7_A          169 EDSQAGIQAIKDSGALPIGV  188 (221)
T ss_dssp             ESSHHHHHHHHHHTCEEEEE
T ss_pred             eCCHHHHHHHHHCCCEEEEE
Confidence            99998766655566665444

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.59  E-value=1.9e-08  Score=82.02  Aligned_cols=116  Identities=9%  Similarity=-0.018  Sum_probs=84.7

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      ..+.++||+||||+++...  +..                              .........|+..++|+.|.+. +.+
T Consensus         8 ~~k~v~~DlDGTL~~~~~~--~~~------------------------------~~~~~~~~~~~~~~~l~~l~~~g~~~   55 (162)
T 2p9j_A            8 KLKLLIMDIDGVLTDGKLY--YTE------------------------------HGETIKVFNVLDGIGIKLLQKMGITL   55 (162)
T ss_dssp             HCCEEEECCTTTTSCSEEE--EET------------------------------TEEEEEEEEHHHHHHHHHHHTTTCEE
T ss_pred             ceeEEEEecCcceECCcee--ecC------------------------------CCceeeeecccHHHHHHHHHHCCCEE
Confidence            4578999999999975210  000                              0011233578899999999987 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      +|.|++....++.+++.++...+|..       ...+...+.+-++.++.+++++++|+|+..-.......|+.+-
T Consensus        56 ~i~T~~~~~~~~~~l~~~gl~~~~~~-------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~  124 (162)
T 2p9j_A           56 AVISGRDSAPLITRLKELGVEEIYTG-------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVA  124 (162)
T ss_dssp             EEEESCCCHHHHHHHHHTTCCEEEEC-------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEeCCCcHHHHHHHHHcCCHhhccC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            99999999999999999887766643       1112224556677889999999999999987766666777654

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.59  E-value=4.8e-08  Score=83.78  Aligned_cols=118  Identities=14%  Similarity=0.079  Sum_probs=81.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEEC------------CCc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYR------------PST  204 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~---------------~yA~~vl~~Ldp~~~f~~rl~r------------~~c  204 (276)
                      ...||+.++|+.|.+. +.++|.|++..               ..++.+++.++..  |...+..            +.+
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~~  133 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPDH  133 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSSC
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccCC
Confidence            3689999999999977 99999999998               6888888887653  4444332            344


Q ss_pred             cccCCc--cccccccccCcCCCcEEEEEcCcccccCCCCCeeee-CccCCCCC--------CC---hHHhHHHHHHHHhh
Q 023829          205 TSTEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC-IPFSAGQP--------HD---NQVLTNVTLLKFLL  270 (276)
Q Consensus       205 ~~~k~~--~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V-~~f~~g~~--------~D---~eL~~l~~~L~~La  270 (276)
                      ...|+.  .+.+-++.+|.+++++++|.|+..-.......|+.. --...|..        .|   ..|.++..+|+.+.
T Consensus       134 ~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~~~~  213 (218)
T 2o2x_A          134 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLG  213 (218)
T ss_dssp             TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHHTC
T ss_pred             ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHHHHh
Confidence            444443  566777888999999999999997766666667544 22111110        11   34667777777765


Q ss_pred             hc
Q 023829          271 SS  272 (276)
Q Consensus       271 ~~  272 (276)
                      .-
T Consensus       214 ~~  215 (218)
T 2o2x_A          214 RD  215 (218)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.59  E-value=3e-08  Score=91.12  Aligned_cols=96  Identities=14%  Similarity=0.119  Sum_probs=75.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC----------ccccCC--ccccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS----------TTSTEY--REHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~----------c~~~k~--~~~~KdL~~  218 (276)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..++          +...++  ..+.+-++.
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            45899999999999988 99999999999999999999998888876654222          111111  145666778


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      +|.+++++++|.|+..-.......|+.+-
T Consensus       258 lgv~~~~~i~VGDs~~Di~aa~~AG~~va  286 (317)
T 4eze_A          258 LNIATENIIACGDGANDLPMLEHAGTGIA  286 (317)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence            89999999999999988776666777554

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=98.59  E-value=1.8e-08  Score=86.35  Aligned_cols=96  Identities=7%  Similarity=-0.033  Sum_probs=78.2

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.++|+.+.+.+.++|.|++....++.+++.++..  |..+++.+.+...++.  .+.+-++.+|.++++|++|
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i  196 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLC  196 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence            34689999999999988999999999999999999998775  7777777665554444  5677888899999999999


Q ss_pred             EcCcccccCCCCCeeeeCcc
Q 023829          230 DNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f  249 (276)
                      +|+..-.......|+.+--+
T Consensus       197 GD~~~Di~~a~~aG~~~~~~  216 (254)
T 3umc_A          197 AAHNYDLKAARALGLKTAFI  216 (254)
T ss_dssp             ESCHHHHHHHHHTTCEEEEE
T ss_pred             cCchHhHHHHHHCCCeEEEE
Confidence            99988776666667665544

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.58  E-value=2.1e-08  Score=85.20  Aligned_cols=96  Identities=17%  Similarity=0.239  Sum_probs=71.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEE--------CCCcc------ccCCccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLY--------RPSTT------STEYREHVK  214 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~~rl~--------r~~c~------~~k~~~~~K  214 (276)
                      ...+||+.++|+.|++. +.++|.|++...+++.+++.++..  .+|..+++        ..+..      ..|...+.+
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            45899999999999987 999999999999999999999876  47776541        11111      012223444


Q ss_pred             cccccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       215 dL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      -++.+|.  +++++|+|++.-.......|+ ...|.
T Consensus       165 ~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~  197 (225)
T 1nnl_A          165 LKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFG  197 (225)
T ss_dssp             HHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEEC
T ss_pred             HHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEec
Confidence            4555665  789999999998888888888 54563

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.58  E-value=4.1e-10  Score=93.98  Aligned_cols=100  Identities=12%  Similarity=0.005  Sum_probs=82.4

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH-hcCCCceeEEEECCCccccCCc--cccccccccCcCCCcE
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR-IDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~-Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~  226 (276)
                      +....||+.++|+.+.+. +.++|.|++...+++.+++. ++...+|..+++.+.+...|+.  .+.+-++.+|.+++++
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  168 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT  168 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            366899999999999966 99999999999988777766 5555678888887776655554  5677788899999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++|+|++.........|+.+--+.
T Consensus       169 ~~vgD~~~Di~~a~~aG~~~~~~~  192 (206)
T 2b0c_A          169 VFFDDNADNIEGANQLGITSILVK  192 (206)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECC
T ss_pred             EEeCCCHHHHHHHHHcCCeEEEec
Confidence            999999998877778899877765

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.56  E-value=1.2e-08  Score=86.34  Aligned_cols=93  Identities=18%  Similarity=0.179  Sum_probs=73.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.+.+.+.++|.|++...     ++.++...+|..+++.+.+...|+.  .+.+-++.+|.+++++++|
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v  178 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHV  178 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEE
Confidence            44789999999999988999999999876     5666666789999888776655544  5778888899999999999


Q ss_pred             EcCc-ccccCCCCCeeeeCcc
Q 023829          230 DNNP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       230 DDsp-~~~~~~p~NgI~V~~f  249 (276)
                      +|+. .-.......|+.+--+
T Consensus       179 GD~~~~Di~~a~~aG~~~~~v  199 (230)
T 3vay_A          179 GDHPSDDIAGAQQAGMRAIWY  199 (230)
T ss_dssp             ESCTTTTHHHHHHTTCEEEEE
T ss_pred             eCChHHHHHHHHHCCCEEEEE
Confidence            9998 6665555666655443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=98.54  E-value=1.3e-08  Score=90.04  Aligned_cols=98  Identities=12%  Similarity=0.152  Sum_probs=78.1

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCc------
Q 023829          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK------  221 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~r------  221 (276)
                      ....||+.++|+.+++.  +.++|.|++...+++.+++.++.. .|..+++.+++...++.  .+.+-++.+|.      
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  191 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQD  191 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSC
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccC
Confidence            45789999999999975  899999999999999999998765 36767776665444433  46677788898      


Q ss_pred             -CCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          222 -DLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       222 -d~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                       ++++|+.|.|++.-.......|+.+-...
T Consensus       192 ~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~  221 (275)
T 2qlt_A          192 PSKSKVVVFEDAPAGIAAGKAAGCKIVGIA  221 (275)
T ss_dssp             GGGSCEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred             CCcceEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence             99999999999988777667776655543

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=98.53  E-value=9e-09  Score=84.63  Aligned_cols=94  Identities=11%  Similarity=0.120  Sum_probs=76.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..||+.++|+.+.+. +.++|.|++. .+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.+  +|+.|+
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iG  159 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIG  159 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEc
Confidence            789999999999987 9999999876 5788999998888889988887766554433  456667778887  999999


Q ss_pred             cCcccccCCCCCeeeeCccC
Q 023829          231 NNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f~  250 (276)
                      |++.-.......|+.+--+.
T Consensus       160 D~~~Di~~a~~aG~~~~~~~  179 (190)
T 2fi1_A          160 DRPIDIEAGQAAGLDTHLFT  179 (190)
T ss_dssp             SSHHHHHHHHHTTCEEEECS
T ss_pred             CCHHHHHHHHHcCCeEEEEC
Confidence            99988777777788766654

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.53  E-value=3.9e-08  Score=82.39  Aligned_cols=94  Identities=21%  Similarity=0.091  Sum_probs=75.4

Q ss_pred             EeeCccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~--~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.+.+  .+.++|.|++....++.+++.+...++|..++....   .+...+.+-++.+|.++++|+.|
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~k---pk~~~~~~~~~~lgi~~~~~i~i  180 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSD---KTEKEYLRLLSILQIAPSELLMV  180 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEESC---CSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecCC---CCHHHHHHHHHHhCCCcceEEEE
Confidence            4578999999999998  699999999999999999999998888988775432   12235777888899999999999


Q ss_pred             EcCc-ccccCCCCCeeeeCc
Q 023829          230 DNNP-FSFLLQPLNGIPCIP  248 (276)
Q Consensus       230 DDsp-~~~~~~p~NgI~V~~  248 (276)
                      +|++ .-.......|+.+.-
T Consensus       181 GD~~~~Di~~a~~aG~~~v~  200 (234)
T 3ddh_A          181 GNSFKSDIQPVLSLGGYGVH  200 (234)
T ss_dssp             ESCCCCCCHHHHHHTCEEEE
T ss_pred             CCCcHHHhHHHHHCCCeEEE
Confidence            9997 666555555665443

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.52  E-value=2.3e-07  Score=88.26  Aligned_cols=79  Identities=11%  Similarity=0.169  Sum_probs=65.7

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc------------hhhHHHHHHHhcCCCceeEEEECCCccccCCc--ccccccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGL------------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLS  217 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~------------~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~  217 (276)
                      ..-||+.++|+.|.+. |.++|.|+..            ..+++.+++.++..  |..+++.++|...|+.  .+.+-++
T Consensus        87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~  164 (416)
T 3zvl_A           87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE  164 (416)
T ss_dssp             ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred             hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence            3689999999999987 9999999965            33488888888764  8888888888777665  5677777


Q ss_pred             ccC----cCCCcEEEEEcCc
Q 023829          218 CLS----KDLCRTLIVDNNP  233 (276)
Q Consensus       218 ~L~----rd~~~~IiVDDsp  233 (276)
                      .+|    .+++++++|.|+.
T Consensus       165 ~l~~~~~v~~~~~l~VGDs~  184 (416)
T 3zvl_A          165 QANEGIPISVEDSVFVGDAA  184 (416)
T ss_dssp             HSSTTCCCCGGGCEEECSCS
T ss_pred             HhCCCCCCCHHHeEEEECCC
Confidence            787    8999999999997

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.51  E-value=1.6e-08  Score=85.48  Aligned_cols=82  Identities=12%  Similarity=0.106  Sum_probs=60.1

Q ss_pred             EeeCccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~--~yelvI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~Ii  228 (276)
                      +...||+.++|+.|++  .+.++|.|++.+..++.+++.++..+ +|.                .+.++.+|.+++++++
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~----------------~~~~~~l~~~~~~~~~  137 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG----------------PDFLEQIVLTRDKTVV  137 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC----------------GGGGGGEEECSCSTTS
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch----------------HHHHHHhccCCccEEE
Confidence            4578999999999998  49999999999999999998887665 664                3445566777777877


Q ss_pred             EEcCccc----ccCCC-CCeeeeCcc
Q 023829          229 VDNNPFS----FLLQP-LNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~----~~~~p-~NgI~V~~f  249 (276)
                      |.|+...    ..... ..|+.+.-|
T Consensus       138 vgDs~~dD~~~~~~a~~~aG~~~i~~  163 (197)
T 1q92_A          138 SADLLIDDRPDITGAEPTPSWEHVLF  163 (197)
T ss_dssp             CCSEEEESCSCCCCSCSSCSSEEEEE
T ss_pred             ECcccccCCchhhhcccCCCceEEEe
Confidence            4444433    45555 567665544

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.51  E-value=3.7e-07  Score=75.63  Aligned_cols=102  Identities=13%  Similarity=0.063  Sum_probs=58.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCch---h--hHHHHHHHh-cCCCceeEEEECCCccccCCccccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLE---G--YARPLVDRI-DGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~---~--yA~~vl~~L-dp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~  225 (276)
                      +...||+.++|+.|++.+.++|.|++.+   .  .....++.. +...++..+++.+..             ++    +.
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-------------~l----~~  130 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-------------II----LA  130 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-------------GB----CC
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-------------ee----cc
Confidence            4578999999999998899999999832   1  224444443 333455555544431             12    67


Q ss_pred             EEEEEcCcccccCCCCCeeeeC-ccCCCCCCC---hHHhHHHHHHHHhh
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCI-PFSAGQPHD---NQVLTNVTLLKFLL  270 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~-~f~~g~~~D---~eL~~l~~~L~~La  270 (276)
                      |++|||++......-+.+|.+. +|......+   +.+.++..+|+.+.
T Consensus       131 ~l~ieDs~~~i~~aaG~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~~  179 (180)
T 3bwv_A          131 DYLIDDNPKQLEIFEGKSIMFTASHNVYEHRFERVSGWRDVKNYFNSIE  179 (180)
T ss_dssp             SEEEESCHHHHHHCSSEEEEECCGGGTTCCSSEEECSHHHHHHHHHHHC
T ss_pred             cEEecCCcchHHHhCCCeEEeCCCcccCCCCceecCCHHHHHHHHHHhh
Confidence            8999999997643322333333 222111111   23456666666554

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.50  E-value=4.4e-08  Score=80.00  Aligned_cols=86  Identities=12%  Similarity=0.040  Sum_probs=67.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN  232 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDs  232 (276)
                      .+.+.  .|+.|++. +.++|.|++....++.+++.++...+|...       ..+...+.+-++.++.+++++++|.|+
T Consensus        34 ~~~~~--~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~  104 (164)
T 3e8m_A           34 TSDSA--GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV-------VDKLSAAEELCNELGINLEQVAYIGDD  104 (164)
T ss_dssp             GGGHH--HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC-------SCHHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred             CChHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc-------CChHHHHHHHHHHcCCCHHHEEEECCC
Confidence            44443  79999887 999999999999999999998877666442       112235666777889999999999999


Q ss_pred             cccccCCCCCeeeeCc
Q 023829          233 PFSFLLQPLNGIPCIP  248 (276)
Q Consensus       233 p~~~~~~p~NgI~V~~  248 (276)
                      ..-.......|+.+-.
T Consensus       105 ~~Di~~~~~ag~~~~~  120 (164)
T 3e8m_A          105 LNDAKLLKRVGIAGVP  120 (164)
T ss_dssp             GGGHHHHTTSSEEECC
T ss_pred             HHHHHHHHHCCCeEEc
Confidence            9887777777887654

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.50  E-value=3.4e-09  Score=91.20  Aligned_cols=94  Identities=10%  Similarity=-0.009  Sum_probs=68.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ....||+.++|+.|++...++|.|++...+++.+++.++..++|.....   +...| ..+.+.+.. +.++++|++|+|
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~---~~~~K-~~~~~~~~~-~~~~~~~~~vgD  169 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVL---IYIHK-ELMLDQVME-CYPARHYVMVDD  169 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEE---EESSG-GGCHHHHHH-HSCCSEEEEECS
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEE---ecCCh-HHHHHHHHh-cCCCceEEEEcC
Confidence            3478999999999998779999999999999999999876666644322   11122 234444444 678999999999


Q ss_pred             Ccc---cccCCCCCeeeeCccC
Q 023829          232 NPF---SFLLQPLNGIPCIPFS  250 (276)
Q Consensus       232 sp~---~~~~~p~NgI~V~~f~  250 (276)
                      ++.   ........|+.+--+.
T Consensus       170 s~~d~~di~~A~~aG~~~i~v~  191 (231)
T 2p11_A          170 KLRILAAMKKAWGARLTTVFPR  191 (231)
T ss_dssp             CHHHHHHHHHHHGGGEEEEEEC
T ss_pred             ccchhhhhHHHHHcCCeEEEeC
Confidence            997   5544556677655443

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=98.49  E-value=1.2e-08  Score=87.05  Aligned_cols=96  Identities=5%  Similarity=-0.040  Sum_probs=76.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.+.+.+.++|.|++....++.+++.++..  |..+++.+.+...++.  .+.+-++.+|.++++|++|
T Consensus       115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i  192 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLA  192 (254)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence            34689999999999988999999999999999999998764  6666666655444443  5677788899999999999


Q ss_pred             EcCcccccCCCCCeeeeCcc
Q 023829          230 DNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f  249 (276)
                      +|+..-.......|+.+--.
T Consensus       193 GD~~~Di~~a~~aG~~~~~~  212 (254)
T 3umg_A          193 AAHNGDLEAAHATGLATAFI  212 (254)
T ss_dssp             ESCHHHHHHHHHTTCEEEEE
T ss_pred             eCChHhHHHHHHCCCEEEEE
Confidence            99988776666667665544

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.49  E-value=1e-08  Score=84.23  Aligned_cols=94  Identities=17%  Similarity=0.139  Sum_probs=76.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ...+|++.++|+.+.+. +.++|+|++...+++ +++.++...+|..+++.+.....|+.  .+.+-++.+|.++++++.
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~  162 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  162 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEE
Confidence            45799999999999987 999999999999999 99998888889888887765544432  456667788999999999


Q ss_pred             EEcCcccccCCCCCeeee
Q 023829          229 VDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V  246 (276)
                      |+|+..-.......|+.+
T Consensus       163 iGD~~nDi~~~~~aG~~~  180 (207)
T 2go7_A          163 IGDRTLDVEFAQNSGIQS  180 (207)
T ss_dssp             EESSHHHHHHHHHHTCEE
T ss_pred             ECCCHHHHHHHHHCCCeE
Confidence            999987766555556653

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.46  E-value=1.2e-08  Score=85.90  Aligned_cols=83  Identities=12%  Similarity=0.125  Sum_probs=61.4

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....||+.++|+.|.+.  +.++|.|++....++.+++.++.   |..++..            ..++.+|.+++++++|
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~------------~~~~~~~~~~~~~~~v  136 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP------------QFVERIILTRDKTVVL  136 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH------------HHHTTEEECSCGGGBC
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH------------HHHHHcCCCcccEEEE
Confidence            45789999999999985  99999999999999999998765   4333221            1356677788888887


Q ss_pred             EcCccc----ccCCC-CCeeeeCcc
Q 023829          230 DNNPFS----FLLQP-LNGIPCIPF  249 (276)
Q Consensus       230 DDsp~~----~~~~p-~NgI~V~~f  249 (276)
                      .|+...    ..... ..|+.+--|
T Consensus       137 gDs~~dD~~~i~~A~~~aG~~~i~~  161 (193)
T 2i7d_A          137 GDLLIDDKDTVRGQEETPSWEHILF  161 (193)
T ss_dssp             CSEEEESSSCCCSSCSSCSSEEEEE
T ss_pred             CCchhhCcHHHhhcccccccceEEE
Confidence            776666    55555 566655444

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=98.42  E-value=2.3e-08  Score=86.37  Aligned_cols=95  Identities=16%  Similarity=0.016  Sum_probs=74.4

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ....||+.++|+.+...+.++|.|++...+++.+++.++...+|..++....   .+...+.+-++.+|.++++|+.|.|
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~k---p~~~~~~~~~~~l~~~~~~~i~iGD  187 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVSE---KDPQTYARVLSEFDLPAERFVMIGN  187 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEESC---CSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeCC---CCHHHHHHHHHHhCcCchhEEEECC
Confidence            4478999999999995599999999999999999999988888877765321   1123566777889999999999999


Q ss_pred             Cc-ccccCCCCCeeeeCcc
Q 023829          232 NP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       232 sp-~~~~~~p~NgI~V~~f  249 (276)
                      +. .-.......|+.+.-+
T Consensus       188 ~~~~Di~~a~~aG~~~~~v  206 (251)
T 2pke_A          188 SLRSDVEPVLAIGGWGIYT  206 (251)
T ss_dssp             CCCCCCHHHHHTTCEEEEC
T ss_pred             CchhhHHHHHHCCCEEEEE
Confidence            99 7766555566655443

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.40  E-value=7.3e-08  Score=81.51  Aligned_cols=116  Identities=16%  Similarity=0.059  Sum_probs=81.7

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023829           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye  170 (276)
                      .+.+.||||+||||+++...                  +.         ..+.   .-..+..+++.  +|+.|.+. +.
T Consensus        17 ~~ik~vifD~DGTL~d~~~~------------------~~---------~~~~---~~~~~~~~~~~--~l~~L~~~g~~   64 (189)
T 3mn1_A           17 KAIKLAVFDVDGVLTDGRLY------------------FM---------EDGS---EIKTFNTLDGQ--GIKMLIASGVT   64 (189)
T ss_dssp             HTCCEEEECSTTTTSCSEEE------------------EE---------TTSC---EEEEEEHHHHH--HHHHHHHTTCE
T ss_pred             HhCCEEEEcCCCCcCCccEe------------------ec---------cCCc---EeeeeccccHH--HHHHHHHCCCE
Confidence            35689999999999986210                  00         0000   00112344444  89999987 99


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeee
Q 023829          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      ++|.|+.....++.+++.++...+|...       ..|...+.+-++.+|.++++++.|.|+..-.......|+.+
T Consensus        65 ~~i~T~~~~~~~~~~~~~lgl~~~f~~~-------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~  133 (189)
T 3mn1_A           65 TAIISGRKTAIVERRAKSLGIEHLFQGR-------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGM  133 (189)
T ss_dssp             EEEECSSCCHHHHHHHHHHTCSEEECSC-------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             EEEEECcChHHHHHHHHHcCCHHHhcCc-------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence            9999999999999999999887776543       22333455666778999999999999998776555566654

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.39  E-value=1.5e-07  Score=81.28  Aligned_cols=95  Identities=14%  Similarity=0.159  Sum_probs=70.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccc--------cCCc-c-cc-------
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS--------TEYR-E-HV-------  213 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~--------~k~~-~-~~-------  213 (276)
                      +..+||+.++|+.|.+. +.++|.|++...+++.+++.|  .++ ..+++.+....        .++. . +.       
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l--~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K  152 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI--VEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  152 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT--SCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC--CCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence            45899999999999977 999999999999999999833  233 44444333221        2222 1 22       


Q ss_pred             -ccccccCcCCCcEEEEEcCcccccCCCCCeeeeCcc
Q 023829          214 -KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       214 -KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                       +-++.++.+++++++|+|+..-.......|+.+..+
T Consensus       153 ~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~  189 (236)
T 2fea_A          153 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD  189 (236)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH
T ss_pred             HHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech
Confidence             677788999999999999998887777788877543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=98.37  E-value=5.6e-08  Score=84.40  Aligned_cols=97  Identities=9%  Similarity=-0.053  Sum_probs=75.9

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCccccCCc--cccccccccCcCC-CcEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSKDL-CRTL  227 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~k~~--~~~KdL~~L~rd~-~~~I  227 (276)
                      ...||+.++|+.+.+. +.++|.|++....++.+++.++..++| ..+++.+.+...++.  .+.+-++.+|.++ ++|+
T Consensus       103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i  182 (267)
T 1swv_A          103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI  182 (267)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred             ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEE
Confidence            4679999999999987 999999999999999999998777775 666666655443333  4566778889998 9999


Q ss_pred             EEEcCcccccCCCCCeeeeCcc
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      .|.|+..-.......|+.+-.+
T Consensus       183 ~iGD~~nDi~~a~~aG~~~i~v  204 (267)
T 1swv_A          183 KVGDTVSDMKEGRNAGMWTVGV  204 (267)
T ss_dssp             EEESSHHHHHHHHHTTSEEEEE
T ss_pred             EEeCCHHHHHHHHHCCCEEEEE
Confidence            9999998776666677544433

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.35  E-value=2.5e-07  Score=78.67  Aligned_cols=94  Identities=11%  Similarity=-0.008  Sum_probs=67.9

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEE-CC----------Ccccc-CCcccccccccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLY-RP----------STTST-EYREHVKDLSCL  219 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~-r~----------~c~~~-k~~~~~KdL~~L  219 (276)
                      ..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|...+. .+          .|... |...+.+-++.+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~  171 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM  171 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence            3699999999999987 99999999999999999999987766654432 11          11100 000122444557


Q ss_pred             C---cCCCcEEEEEcCcccccCCCCCeeee
Q 023829          220 S---KDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       220 ~---rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      |   .++++|++|.|+..-.......|+.+
T Consensus       172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~  201 (232)
T 3fvv_A          172 GLALGDFAESYFYSDSVNDVPLLEAVTRPI  201 (232)
T ss_dssp             TCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred             CCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence            8   88999999999998776655566655

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.35  E-value=1.9e-07  Score=81.00  Aligned_cols=117  Identities=11%  Similarity=0.095  Sum_probs=83.1

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      .-+.+||||||||+++...                  +.         ..+.   .-..+..+++.  +|+.|.+. +.+
T Consensus        48 ~ik~viFDlDGTL~Ds~~~------------------~~---------~~~~---~~~~~~~~d~~--~L~~L~~~G~~l   95 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIY------------------MG---------NQGE---ELKAFNVRDGY--GIRCLITSDIDV   95 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEE------------------EE---------TTSC---EEEEEEHHHHH--HHHHHHHTTCEE
T ss_pred             CCCEEEEeCCCCEECCHHH------------------Hh---------hhhH---HHHHhccchHH--HHHHHHHCCCEE
Confidence            4579999999999996310                  00         0000   00112344554  89999987 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCc
Q 023829          172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIP  248 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~  248 (276)
                      +|.|+.....++.+++.++...+|..+       ..|...+.+-++.+|.++++|+.|-|+..-.......|+.+-.
T Consensus        96 ~I~T~~~~~~~~~~l~~lgi~~~f~~~-------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~  165 (211)
T 3ij5_A           96 AIITGRRAKLLEDRANTLGITHLYQGQ-------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV  165 (211)
T ss_dssp             EEECSSCCHHHHHHHHHHTCCEEECSC-------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred             EEEeCCCHHHHHHHHHHcCCchhhccc-------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe
Confidence            999999999999999999887766543       1222245566677899999999999999987766667776543

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=98.34  E-value=2.6e-08  Score=83.93  Aligned_cols=97  Identities=10%  Similarity=0.100  Sum_probs=77.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCcccc--CCc--cccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTST--EYR--EHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~--k~~--~~~KdL~~L~rd~~~~  226 (276)
                      ....||+.++|+.+..  .++|.|++...+++.+++.++..++| ..+++.+.+...  ++.  .+.+-++.+|.++++|
T Consensus        86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~  163 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV  163 (229)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHe
Confidence            3478999999999876  99999999999999999999888888 888877655443  333  5667778899999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +.|+|+..-.......|+.+--+.
T Consensus       164 i~iGD~~~Di~~a~~aG~~~i~~~  187 (229)
T 2fdr_A          164 VVVEDSVHGIHGARAAGMRVIGFT  187 (229)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEEe
Confidence            999999987766666676644443

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.33  E-value=3.2e-07  Score=76.59  Aligned_cols=116  Identities=9%  Similarity=-0.009  Sum_probs=81.6

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      ..++++||+||||+++...                  +.         ..     ....-...|...+.|+.|.+. +.+
T Consensus         7 ~ik~i~~DlDGTL~~~~~~------------------~~---------~~-----~~~~~~~~~~~~~~l~~L~~~G~~~   54 (180)
T 1k1e_A            7 NIKFVITDVDGVLTDGQLH------------------YD---------AN-----GEAIKSFHVRDGLGIKMLMDADIQV   54 (180)
T ss_dssp             GCCEEEEECTTTTSCSEEE------------------EE---------TT-----EEEEEEEEHHHHHHHHHHHHTTCEE
T ss_pred             CCeEEEEeCCCCcCCCCee------------------ec---------cC-----cceeeeeccchHHHHHHHHHCCCeE
Confidence            3578999999999975210                  00         00     011223567788999999987 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       172 vI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      +|.|+.....++.+++.++...+|..      + ..+...+.+-++.++.++++++.|.|+..-.......|+.+-
T Consensus        55 ~i~Tg~~~~~~~~~~~~lgl~~~~~~------~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~  123 (180)
T 1k1e_A           55 AVLSGRDSPILRRRIADLGIKLFFLG------K-LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA  123 (180)
T ss_dssp             EEEESCCCHHHHHHHHHHTCCEEEES------C-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             EEEeCCCcHHHHHHHHHcCCceeecC------C-CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE
Confidence            99999999999999999987766532      1 112123445566778899999999999987655555565544

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.33  E-value=2.6e-07  Score=87.25  Aligned_cols=96  Identities=13%  Similarity=0.096  Sum_probs=74.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCc----------cccCC--ccccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST----------TSTEY--REHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c----------~~~k~--~~~~KdL~~  218 (276)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++...+|...+.-.+.          ...++  ..+.+-++.
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~  334 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQR  334 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHH
Confidence            46899999999999988 999999999999999999999887777654321111          11111  145666778


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      +|.++++|+.|.|+..-.......|+.+-
T Consensus       335 ~gi~~~~~i~vGD~~~Di~~a~~aG~~va  363 (415)
T 3p96_A          335 AGVPMAQTVAVGDGANDIDMLAAAGLGIA  363 (415)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCcChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            89999999999999988776666777664

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.30  E-value=1.3e-07  Score=80.93  Aligned_cols=80  Identities=6%  Similarity=0.001  Sum_probs=61.6

Q ss_pred             HHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCC
Q 023829          161 FLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQ  239 (276)
Q Consensus       161 FL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~  239 (276)
                      -|+.|.+. +.++|.|+.....++.+++.++...+|..+       ..+...+.+-++.+|.++++++.|.|+..-....
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~-------k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~  132 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ-------DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM  132 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC-------SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC-------CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH
Confidence            38999887 999999999999999999999877655321       1122245556677899999999999999887666


Q ss_pred             CCCeeeeC
Q 023829          240 PLNGIPCI  247 (276)
Q Consensus       240 p~NgI~V~  247 (276)
                      ...|+.+-
T Consensus       133 ~~ag~~va  140 (195)
T 3n07_A          133 EKVALRVC  140 (195)
T ss_dssp             TTSSEEEE
T ss_pred             HHCCCEEE
Confidence            66666654

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.27  E-value=8.8e-08  Score=90.18  Aligned_cols=97  Identities=9%  Similarity=-0.083  Sum_probs=78.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC------chhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcC
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAG------LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD  222 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~------~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd  222 (276)
                      ....||+.++|+.|++. +.++|.|++      ........+.  +...+|..+++.+++...|+.  .|.+-++++|.+
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~  176 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS  176 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence            45889999999999988 999999998      3333333333  334589999998888777766  688999999999


Q ss_pred             CCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          223 LCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       223 ~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +++|++|||+..........|+.+.-+.
T Consensus       177 p~~~~~v~D~~~di~~a~~aG~~~~~~~  204 (555)
T 3i28_A          177 PSEVVFLDDIGANLKPARDLGMVTILVQ  204 (555)
T ss_dssp             GGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             hhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence            9999999999988877777888877664

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.20  E-value=2.4e-07  Score=78.61  Aligned_cols=79  Identities=9%  Similarity=0.010  Sum_probs=62.3

Q ss_pred             HHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCC
Q 023829          161 FLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQ  239 (276)
Q Consensus       161 FL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~  239 (276)
                      -|+.|.+. +.++|.|+.....++.+++.++...+|...       ..+...+.+-++.++.+++++++|.|+..-....
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~  126 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ-------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI  126 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC-------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC-------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            38899877 999999999999999999999877655432       1222355666778899999999999999877666


Q ss_pred             CCCeeee
Q 023829          240 PLNGIPC  246 (276)
Q Consensus       240 p~NgI~V  246 (276)
                      ...|+.+
T Consensus       127 ~~ag~~~  133 (191)
T 3n1u_A          127 QQVGLGV  133 (191)
T ss_dssp             HHSSEEE
T ss_pred             HHCCCEE
Confidence            6667766

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.19  E-value=1.8e-07  Score=78.22  Aligned_cols=83  Identities=12%  Similarity=0.043  Sum_probs=61.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN  232 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDs  232 (276)
                      .++++  +|+.|.+. +.++|.|++...+++.+++.++.. +|...       ..|...+.+-++.+|.++++++.|.|+
T Consensus        42 ~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~~-------~~k~~~l~~~~~~~~~~~~~~~~vGD~  111 (176)
T 3mmz_A           42 RGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHGI-------DRKDLALKQWCEEQGIAPERVLYVGND  111 (176)
T ss_dssp             HHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEESC-------SCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             cccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeCC-------CChHHHHHHHHHHcCCCHHHEEEEcCC
Confidence            34444  89999887 999999999999999999999876 33221       112224556677789999999999999


Q ss_pred             cccccCCCCCeeee
Q 023829          233 PFSFLLQPLNGIPC  246 (276)
Q Consensus       233 p~~~~~~p~NgI~V  246 (276)
                      ..-.......|+.+
T Consensus       112 ~nD~~~~~~ag~~v  125 (176)
T 3mmz_A          112 VNDLPCFALVGWPV  125 (176)
T ss_dssp             GGGHHHHHHSSEEE
T ss_pred             HHHHHHHHHCCCeE
Confidence            98766555555544

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.17  E-value=1.3e-06  Score=72.27  Aligned_cols=94  Identities=14%  Similarity=0.114  Sum_probs=69.2

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEEC-CC----------cc-ccCCcccccccccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-PS----------TT-STEYREHVKDLSCL  219 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r-~~----------c~-~~k~~~~~KdL~~L  219 (276)
                      ...|++.++|+.+.+. +.++|+|++...+++.+++.++...+|...+.. +.          +. ..|...+.+-++.+
T Consensus        76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~l  155 (211)
T 1l7m_A           76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIE  155 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHc
Confidence            4679999999999987 999999999999999999988776666543321 11          11 01111344555667


Q ss_pred             CcCCCcEEEEEcCcccccCCCCCeeee
Q 023829          220 SKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       220 ~rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      |.++++|+.|.|+..-.......|+.+
T Consensus       156 gi~~~~~~~iGD~~~Di~~~~~ag~~~  182 (211)
T 1l7m_A          156 GINLEDTVAVGDGANDISMFKKAGLKI  182 (211)
T ss_dssp             TCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred             CCCHHHEEEEecChhHHHHHHHCCCEE
Confidence            899999999999998877666677765

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.15  E-value=8.6e-07  Score=72.79  Aligned_cols=114  Identities=15%  Similarity=0.155  Sum_probs=75.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc-CC--ccccccccccCcCCCcEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST-EY--REHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~-k~--~~~~KdL~~L~rd~~~~I  227 (276)
                      +..+||+.++|+.+.+. +.++|.|++...+++.+ +.++...++....+.+..... +.  ......++.+  ++++|+
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i  154 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFIL  154 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEE
Confidence            35899999999999988 99999999999999988 887766565444443332111 00  1122344445  889999


Q ss_pred             EEEcCcccccCCCCCeeeeCccCCCC-CCC---hHHhHHHHHHHHh
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPFSAGQ-PHD---NQVLTNVTLLKFL  269 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f~~g~-~~D---~eL~~l~~~L~~L  269 (276)
                      .|.|+..-.......|+.|- +.++. ..|   ..+.++..+|+.+
T Consensus       155 ~iGD~~~Di~~~~~ag~~v~-~~~~~~~ad~v~~~~~el~~~l~~l  199 (201)
T 4ap9_A          155 AMGDGYADAKMFERADMGIA-VGREIPGADLLVKDLKELVDFIKNL  199 (201)
T ss_dssp             EEECTTCCHHHHHHCSEEEE-ESSCCTTCSEEESSHHHHHHHHHTC
T ss_pred             EEeCCHHHHHHHHhCCceEE-ECCCCccccEEEccHHHHHHHHHHh
Confidence            99999988766666677642 32121 122   1245566666654

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.10  E-value=2.4e-06  Score=71.75  Aligned_cols=82  Identities=9%  Similarity=0.009  Sum_probs=62.8

Q ss_pred             HHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccC
Q 023829          160 EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL  238 (276)
Q Consensus       160 eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~  238 (276)
                      .+|+.|.+. +.++|.|+.....++.+++.++...+|..       ...+...+.+-++.+|.+++++++|.|+..-...
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~-------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~  132 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG-------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPV  132 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHH
T ss_pred             HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence            489999887 99999999999999999999887655532       1222224555667788899999999999987766


Q ss_pred             CCCCeeeeCc
Q 023829          239 QPLNGIPCIP  248 (276)
Q Consensus       239 ~p~NgI~V~~  248 (276)
                      ....|+.+--
T Consensus       133 a~~ag~~~~~  142 (188)
T 2r8e_A          133 MEKVGLSVAV  142 (188)
T ss_dssp             HTTSSEEEEC
T ss_pred             HHHCCCEEEe
Confidence            6667776643

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.09  E-value=9.6e-06  Score=67.01  Aligned_cols=86  Identities=13%  Similarity=0.280  Sum_probs=63.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEE-E-CCCc----cccCC--ccccccccc-cCc
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRL-Y-RPST----TSTEY--REHVKDLSC-LSK  221 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~~rl-~-r~~c----~~~k~--~~~~KdL~~-L~r  221 (276)
                      .+||+.++|+.+.+. +.++|.|++...+++.+++.++..  .+|...+ + .+.+    ...+.  ....+.+.. +|.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  162 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGL  162 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCC
Confidence            789999999999987 999999999999999999999874  4565332 2 2222    11111  234555544 488


Q ss_pred             CCCcEEEEEcCcccccCC
Q 023829          222 DLCRTLIVDNNPFSFLLQ  239 (276)
Q Consensus       222 d~~~~IiVDDsp~~~~~~  239 (276)
                      ++++++.|.|+..-....
T Consensus       163 ~~~~~~~vGD~~~Di~~~  180 (219)
T 3kd3_A          163 IDGEVIAIGDGYTDYQLY  180 (219)
T ss_dssp             CCSEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCHhHHHHH
Confidence            999999999999866543

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.08  E-value=2.2e-06  Score=74.58  Aligned_cols=84  Identities=17%  Similarity=0.133  Sum_probs=62.8

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..++..+      .....|.+....    +++.|-|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~------k~~~~k~~~~~~----~~~~vGD  213 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE------KAEKVKEVQQKY----VTAMVGD  213 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG------HHHHHHHHHTTS----CEEEEEC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH------HHHHHHHHHhcC----CEEEEeC
Confidence            6899999999999987 9999999999999999999998877765443221      123344443322    7899999


Q ss_pred             CcccccCCCCCeeee
Q 023829          232 NPFSFLLQPLNGIPC  246 (276)
Q Consensus       232 sp~~~~~~p~NgI~V  246 (276)
                      +..-.......|+.|
T Consensus       214 ~~nDi~~~~~Ag~~v  228 (280)
T 3skx_A          214 GVNDAPALAQADVGI  228 (280)
T ss_dssp             TTTTHHHHHHSSEEE
T ss_pred             CchhHHHHHhCCceE
Confidence            988766555566644

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.06  E-value=2.3e-06  Score=78.18  Aligned_cols=118  Identities=15%  Similarity=0.135  Sum_probs=85.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCc----------ccc--CCccccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST----------TST--EYREHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c----------~~~--k~~~~~KdL~~  218 (276)
                      +..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|...+...+.          ...  +...+.+-++.
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~  256 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQ  256 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHH
Confidence            45899999999999987 999999999999999999999988777765432211          111  11245666778


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeCccCCCCC----------CChHHhHHHHHHHHhhh
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQP----------HDNQVLTNVTLLKFLLS  271 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~----------~D~eL~~l~~~L~~La~  271 (276)
                      +|.++++|+.|.|+..-.......|+.+-- . +.+          .+..|..++.+|+..-.
T Consensus       257 lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~-~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~  317 (335)
T 3n28_A          257 YDVEIHNTVAVGDGANDLVMMAAAGLGVAY-H-AKPKVEAKAQTAVRFAGLGGVVCILSAALV  317 (335)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CCHHHHTTSSEEESSSCTHHHHHHHHHHHH
T ss_pred             cCCChhhEEEEeCCHHHHHHHHHCCCeEEe-C-CCHHHHhhCCEEEecCCHHHHHHHHHhHHH
Confidence            899999999999999877666667776543 3 221          23455666666665443

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.05  E-value=1.9e-07  Score=80.62  Aligned_cols=91  Identities=7%  Similarity=0.003  Sum_probs=62.8

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEEC-C--CccccCC--ccccccccccCcCCCcEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-P--STTSTEY--REHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r-~--~c~~~k~--~~~~KdL~~L~rd~~~~I  227 (276)
                      ..||+.++|+.|++. +.++|.|++....++.+++.|.  .+|..+... +  .+...|+  ..+.+-++.+|.    ++
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~--~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l  162 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA--DNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RI  162 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH--HHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EE
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH--HhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EE
Confidence            578999999999977 9999999999888777777643  233322111 0  1111222  356666677776    99


Q ss_pred             EEEcCcccccCCCCCeeeeCccC
Q 023829          228 IVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|+|+..........|+.+.-+.
T Consensus       163 ~VGDs~~Di~aA~~aG~~~i~v~  185 (211)
T 2b82_A          163 FYGDSDNDITAARDVGARGIRIL  185 (211)
T ss_dssp             EEESSHHHHHHHHHTTCEEEECC
T ss_pred             EEECCHHHHHHHHHCCCeEEEEe
Confidence            99999988877777788765554

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=98.04  E-value=3.2e-06  Score=72.28  Aligned_cols=98  Identities=18%  Similarity=0.187  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|++. +.++|.|++...+++.+++.++...+|..+++.+.+...|+.  .+.+-++.+|.++++|++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~  172 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALM  172 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            34789999999999987 999999999999999999999988899999998877665553  567778889999999999


Q ss_pred             EEcCc-ccccCCCCCeeeeCcc
Q 023829          229 VDNNP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~V~~f  249 (276)
                      |+|++ .-.......|+.+--+
T Consensus       173 iGD~~~~Di~~a~~aG~~~~~v  194 (241)
T 2hoq_A          173 VGDRLYSDIYGAKRVGMKTVWF  194 (241)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEE
T ss_pred             ECCCchHhHHHHHHCCCEEEEE
Confidence            99998 5565555566654433

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=97.96  E-value=2.9e-06  Score=75.03  Aligned_cols=96  Identities=6%  Similarity=-0.048  Sum_probs=81.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc---CCCceeEEEECCCccccCCc--cccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID---GENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld---p~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~  225 (276)
                      +...||+.++|+.|++. +.++|.|++....++.+++.++   ...+|..++.. ++. .|+.  .|.+-++.+|.++++
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~~  206 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTNN  206 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGGG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCccc
Confidence            56889999999999875 9999999999999999998654   66789998888 776 6664  678889999999999


Q ss_pred             EEEEEcCcccccCCCCCeeeeCcc
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      ||+|+|+.........+|+.+.-+
T Consensus       207 ~l~VgDs~~di~aA~~aG~~~i~v  230 (261)
T 1yns_A          207 ILFLTDVTREASAAEEADVHVAVV  230 (261)
T ss_dssp             EEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             EEEEcCCHHHHHHHHHCCCEEEEE
Confidence            999999988887777788765544

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.81  E-value=3.6e-05  Score=68.64  Aligned_cols=82  Identities=16%  Similarity=0.136  Sum_probs=53.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCch---hhHHHHHHHhcCC--CceeEEEECCCccccCCccccccccccCcCCCcE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLE---GYARPLVDRIDGE--NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~---~yA~~vl~~Ldp~--~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~  226 (276)
                      ...||+.++|+.|.+. +.++|.|+...   ..+...++.++..  .+|..++..+..  .+... .+.+...+  .+.+
T Consensus       101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~~-~~~~~~~~--~~~~  175 (258)
T 2i33_A          101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKEK-RRELVSQT--HDIV  175 (258)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSHH-HHHHHHHH--EEEE
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcHH-HHHHHHhC--CCce
Confidence            4779999999999987 99999999884   4455566666665  455555554431  11111 11111122  3348


Q ss_pred             EEEEcCcccccCC
Q 023829          227 LIVDNNPFSFLLQ  239 (276)
Q Consensus       227 IiVDDsp~~~~~~  239 (276)
                      ++|.|+..-+...
T Consensus       176 l~VGDs~~Di~aA  188 (258)
T 2i33_A          176 LFFGDNLSDFTGF  188 (258)
T ss_dssp             EEEESSGGGSTTC
T ss_pred             EEeCCCHHHhccc
Confidence            8999999877655

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=97.72  E-value=1.6e-06  Score=74.83  Aligned_cols=93  Identities=10%  Similarity=-0.056  Sum_probs=58.9

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee---EEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS---LRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~---~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ..|++.++|+.+.+.+.+ |.|+....++...+..++...+|.   .....+.....|+.  .+.+-++.+|.++++|++
T Consensus       123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~  201 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVM  201 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEE
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEE
Confidence            457888888888855777 888877766544433333333332   22233333333333  467778889999999999


Q ss_pred             EEcCc-ccccCCCCCeeeeC
Q 023829          229 VDNNP-FSFLLQPLNGIPCI  247 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~V~  247 (276)
                      |.|++ .-.......|+..-
T Consensus       202 iGD~~~~Di~~a~~aG~~~i  221 (259)
T 2ho4_A          202 IGDDCRDDVDGAQNIGMLGI  221 (259)
T ss_dssp             EESCTTTTHHHHHHTTCEEE
T ss_pred             ECCCcHHHHHHHHHCCCcEE
Confidence            99998 66655555555443

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=97.70  E-value=2e-05  Score=65.91  Aligned_cols=97  Identities=14%  Similarity=0.121  Sum_probs=79.2

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCc---hhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGL---EGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~---~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      ..||+.++|+.+.+. +.++|.|++.   ..+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.++++|+
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  179 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL  179 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceE
Confidence            489999999999987 9999999999   99999999999888899998887766554443  46677888999999999


Q ss_pred             EEEcCc-ccccCCCCCeeeeCccC
Q 023829          228 IVDNNP-FSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       228 iVDDsp-~~~~~~p~NgI~V~~f~  250 (276)
                      .|+|++ .-.......|+.+--+.
T Consensus       180 ~iGD~~~nDi~~a~~aG~~~~~~~  203 (235)
T 2om6_A          180 HIGDTYAEDYQGARKVGMWAVWIN  203 (235)
T ss_dssp             EEESCTTTTHHHHHHTTSEEEEEC
T ss_pred             EECCChHHHHHHHHHCCCEEEEEC
Confidence            999999 66655555666655443

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=97.48  E-value=1.5e-05  Score=75.37  Aligned_cols=99  Identities=11%  Similarity=-0.020  Sum_probs=80.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCcee--EEEECCCcc-----------ccCCc--ccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFS--LRLYRPSTT-----------STEYR--EHVKD  215 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~--~rl~r~~c~-----------~~k~~--~~~Kd  215 (276)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|.  .+++.++..           ..|+.  .|.+.
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a  293 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence            45789999999999987 9999999999999999999998888998  777766532           13333  57777


Q ss_pred             ccccC--------------cCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829          216 LSCLS--------------KDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       216 L~~L~--------------rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ++.+|              .++++|++|+|++.........|+.+.-+.
T Consensus       294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~  342 (384)
T 1qyi_A          294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL  342 (384)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence            78887              789999999999988777777787765443

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.47  E-value=0.0004  Score=56.76  Aligned_cols=77  Identities=19%  Similarity=0.142  Sum_probs=48.0

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN  232 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDs  232 (276)
                      .-|++.+.|+.+.+. +.++|+|.-.......+++.++..+.-...++.++     +. ..+-.....+.+.--++|||+
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~-----P~-~~~~~~~~~rK~~~~~fIDDR   98 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY-----PE-EERDHQGFSRKLKADLFIDDR   98 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS-----TT-C---CCSCCSSCCCSEEECTT
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC-----ch-hhhcchhhcCCcCCCEEeecc
Confidence            357899999999987 99999999887777778888777664222222111     11 111111223334556789998


Q ss_pred             cccc
Q 023829          233 PFSF  236 (276)
Q Consensus       233 p~~~  236 (276)
                      ....
T Consensus        99 ~~~~  102 (142)
T 2obb_A           99 NVGG  102 (142)
T ss_dssp             STTC
T ss_pred             ccCC
Confidence            8654

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.45  E-value=6e-05  Score=62.95  Aligned_cols=116  Identities=9%  Similarity=0.006  Sum_probs=72.6

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023829           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-  168 (276)
Q Consensus        90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-  168 (276)
                      +..+-++||+|+||||.+....  +                         ..+|..   --.+..|.+.  .|+.|.+. 
T Consensus         5 ~~~~ikliv~D~DGtL~d~~~~--~-------------------------~~~g~~---~~~f~~~D~~--~L~~Lk~~G   52 (168)
T 3ewi_A            5 KLKEIKLLVCNIDGCLTNGHIY--V-------------------------SGDQKE---IISYDVKDAI--GISLLKKSG   52 (168)
T ss_dssp             --CCCCEEEEECCCCCSCSCCB--C-------------------------CSSCCC---EEEEEHHHHH--HHHHHHHTT
T ss_pred             hHhcCcEEEEeCccceECCcEE--E-------------------------cCCCCE---EEEEecCcHH--HHHHHHHCC
Confidence            3446789999999999974210  0                         001110   1113455553  68999887 


Q ss_pred             ceEEEEccCchhhHHHHHH--HhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeee
Q 023829          169 ADLILFTAGLEGYARPLVD--RIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       169 yelvI~Ts~~~~yA~~vl~--~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      +.++|.|+.  ..++.+++  .++.. +|    ..  + ..|...+.+-++.+|.++++++.|-|+..-.......|+.+
T Consensus        53 i~~~I~Tg~--~~~~~~l~~l~lgi~-~~----~g--~-~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~  122 (168)
T 3ewi_A           53 IEVRLISER--ACSKQTLSALKLDCK-TE----VS--V-SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSA  122 (168)
T ss_dssp             CEEEEECSS--CCCHHHHHTTCCCCC-EE----CS--C-SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEE
T ss_pred             CEEEEEeCc--HHHHHHHHHhCCCcE-EE----EC--C-CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEE
Confidence            999999998  78999998  44432 22    11  1 12222345556678999999999999998765544455544


Q ss_pred             C
Q 023829          247 I  247 (276)
Q Consensus       247 ~  247 (276)
                      -
T Consensus       123 a  123 (168)
T 3ewi_A          123 V  123 (168)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=97.39  E-value=0.00017  Score=64.28  Aligned_cols=97  Identities=11%  Similarity=0.083  Sum_probs=71.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhH---HHHHHH--------hcCCCceeEEEECCCccccCCc--cccccccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYA---RPLVDR--------IDGENLFSLRLYRPSTTSTEYR--EHVKDLSC  218 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA---~~vl~~--------Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~  218 (276)
                      ...||+.++|+.|++. +.++|.|+....++   ..+++.        ++.  .|...+.+++.. .++.  .+.+-++.
T Consensus       188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~-~kp~p~~~~~~~~~  264 (301)
T 1ltq_A          188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD-TRKDDVVKEEIFWK  264 (301)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC-CSCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC-CcHHHHHHHHHHHH
Confidence            4789999999999987 99999999998776   455666        444  477777776542 2332  34555566


Q ss_pred             cCcCCCc-EEEEEcCcccccCCCCCeeeeCccCCC
Q 023829          219 LSKDLCR-TLIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       219 L~rd~~~-~IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      ++.+..+ +++|+|++........+|+.+-....|
T Consensus       265 ~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          265 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            7666544 689999999998888889987665444

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=97.38  E-value=1.6e-06  Score=73.32  Aligned_cols=97  Identities=13%  Similarity=-0.049  Sum_probs=58.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEE---------------------------------EEccCchhhHHHHHHHhc-CCCcee
Q 023829          152 VFERPGLREFLKQLSEF-ADLI---------------------------------LFTAGLEGYARPLVDRID-GENLFS  196 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelv---------------------------------I~Ts~~~~yA~~vl~~Ld-p~~~f~  196 (276)
                      ....||+.++|+.+.+. +.+.                                 +.|+.. ..++.+++.+. ...+|+
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~~~~~~~~~  164 (250)
T 2c4n_A           86 KAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPACGALCAGIE  164 (250)
T ss_dssp             EEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCHHHHHHHHH
T ss_pred             EEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecchHHHHHHH
Confidence            45779999999999886 7776                                 666655 33222222211 111223


Q ss_pred             EEEECCCccccCC--ccccccccccCcCCCcEEEEEcC-cccccCCCCCeeeeCcc
Q 023829          197 LRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIVDNN-PFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       197 ~rl~r~~c~~~k~--~~~~KdL~~L~rd~~~~IiVDDs-p~~~~~~p~NgI~V~~f  249 (276)
                      ...+.+.+...++  ..+.+-++.+|.++++|+.|.|+ ..-.......|+.+--.
T Consensus       165 ~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v  220 (250)
T 2c4n_A          165 KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV  220 (250)
T ss_dssp             HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEE
T ss_pred             HHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEE
Confidence            2223333322222  24666778889999999999999 57776666677665443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=97.30  E-value=8.7e-05  Score=65.66  Aligned_cols=94  Identities=10%  Similarity=-0.113  Sum_probs=57.2

Q ss_pred             eCccHHHHHHHhhhc--ceEEEEccC---------------------chhhHHHHHHHhcCCCceeEE----------EE
Q 023829          154 ERPGLREFLKQLSEF--ADLILFTAG---------------------LEGYARPLVDRIDGENLFSLR----------LY  200 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~--yelvI~Ts~---------------------~~~yA~~vl~~Ldp~~~f~~r----------l~  200 (276)
                      .+|++.++|+.+.+.  +.+.+.|+.                     ....+..+++..+...+|...          .+
T Consensus       123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~  202 (289)
T 3gyg_A          123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD  202 (289)
T ss_dssp             CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEE
T ss_pred             CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceE
Confidence            568999999999875  456677766                     334445555544433233221          12


Q ss_pred             CCCccccCC--ccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          201 RPSTTSTEY--REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       201 r~~c~~~k~--~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      .+.....++  ....+-++.+|.++++|+.|-|+..-.......|+.|.
T Consensus       203 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~  251 (289)
T 3gyg_A          203 VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYL  251 (289)
T ss_dssp             EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEE
Confidence            111111111  13345566778999999999999998876666776543

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.24  E-value=0.00046  Score=61.92  Aligned_cols=82  Identities=15%  Similarity=0.124  Sum_probs=53.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHHHHHHHhcCCCcee-EEEECCCccccCCccccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGENLFS-LRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~----yA~~vl~~Ldp~~~f~-~rl~r~~c~~~k~~~~~KdL~~L~rd~~~  225 (276)
                      ....||+.+||+.|.+. ++|+|.|+....    .+...++.++...++. .++.+... ..| ..-.+.|...|.  +-
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-~~K-~~~r~~L~~~gy--~i  175 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-SNK-SVRFKQVEDMGY--DI  175 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC-SSS-HHHHHHHHTTTC--EE
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC-CCh-HHHHHHHHhcCC--CE
Confidence            45889999999999987 999999988664    5666666666555443 34445432 112 123334444343  33


Q ss_pred             EEEEEcCccccc
Q 023829          226 TLIVDNNPFSFL  237 (276)
Q Consensus       226 ~IiVDDsp~~~~  237 (276)
                      ++.|-|+..-+.
T Consensus       176 v~~iGD~~~Dl~  187 (260)
T 3pct_A          176 VLFVGDNLNDFG  187 (260)
T ss_dssp             EEEEESSGGGGC
T ss_pred             EEEECCChHHcC
Confidence            889999877664

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=97.15  E-value=0.00041  Score=61.75  Aligned_cols=83  Identities=7%  Similarity=0.030  Sum_probs=66.3

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ..+||+.++|+.|.+. +.++|.|++....++.+++.++...+|..+.     .    ....+-++.++.+ ++|++|.|
T Consensus       163 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~-----~----~~K~~~~~~l~~~-~~~~~vGD  232 (287)
T 3a1c_A          163 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-----P----HQKSEEVKKLQAK-EVVAFVGD  232 (287)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC-----T----TCHHHHHHHHTTT-CCEEEEEC
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC-----h----HHHHHHHHHHhcC-CeEEEEEC
Confidence            4899999999999987 9999999999999999999998776664332     1    1225566777888 99999999


Q ss_pred             CcccccCCCCCeee
Q 023829          232 NPFSFLLQPLNGIP  245 (276)
Q Consensus       232 sp~~~~~~p~NgI~  245 (276)
                      +..-.......|+.
T Consensus       233 s~~Di~~a~~ag~~  246 (287)
T 3a1c_A          233 GINDAPALAQADLG  246 (287)
T ss_dssp             TTTCHHHHHHSSEE
T ss_pred             CHHHHHHHHHCCee
Confidence            99877655556665

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=97.11  E-value=0.00011  Score=65.00  Aligned_cols=94  Identities=13%  Similarity=0.120  Sum_probs=72.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh-----------cCCCceeEEEECCCccccCCc--cccccccc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI-----------DGENLFSLRLYRPSTTSTEYR--EHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~L-----------dp~~~f~~rl~r~~c~~~k~~--~~~KdL~~  218 (276)
                      ....||+.++|+.   .+.++|.|++.+..++.+++..           +...+|...+.. .....|+.  .|.+-+++
T Consensus       124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g~KP~p~~~~~a~~~  199 (253)
T 2g80_A          124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSGKKTETQSYANILRD  199 (253)
T ss_dssp             BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHCCTTCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-eccCCCCCHHHHHHHHHH
Confidence            4578999999999   7999999999999999999876           233446554432 11012443  68888999


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeCcc
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      +|.++++||+|+|++.........|+.+.-+
T Consensus       200 lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v  230 (253)
T 2g80_A          200 IGAKASEVLFLSDNPLELDAAAGVGIATGLA  230 (253)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence            9999999999999999887777788876554

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.11  E-value=0.00075  Score=60.56  Aligned_cols=83  Identities=12%  Similarity=0.087  Sum_probs=53.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHHHHHHHhcCCCcee-EEEECCCccccCCccccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGENLFS-LRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~----yA~~vl~~Ldp~~~f~-~rl~r~~c~~~k~~~~~KdL~~L~rd~~~  225 (276)
                      ....||+.+||+.|.+. ++|+|.|+....    .+..-++.++...++. .++.+.... .| ..-.+.|...|..  -
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~-~K-~~~r~~l~~~Gy~--i  175 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKS-AK-AARFAEIEKQGYE--I  175 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCS-CC-HHHHHHHHHTTEE--E
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCC-Ch-HHHHHHHHhcCCC--E
Confidence            45899999999999987 999999987664    5555566665544442 445554431 22 1233344434433  3


Q ss_pred             EEEEEcCcccccC
Q 023829          226 TLIVDNNPFSFLL  238 (276)
Q Consensus       226 ~IiVDDsp~~~~~  238 (276)
                      ++.|-|+..-+..
T Consensus       176 v~~vGD~~~Dl~~  188 (262)
T 3ocu_A          176 VLYVGDNLDDFGN  188 (262)
T ss_dssp             EEEEESSGGGGCS
T ss_pred             EEEECCChHHhcc
Confidence            8999999877654

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.89  E-value=0.0022  Score=50.54  Aligned_cols=40  Identities=15%  Similarity=0.196  Sum_probs=30.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhh------------HHHHHHHhcCCC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGY------------ARPLVDRIDGEN  193 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~y------------A~~vl~~Ldp~~  193 (276)
                      ..|+..+.|+.+.+. +.++|.|......            ++.+++.+...+
T Consensus        25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~~~   77 (126)
T 1xpj_A           25 PRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ   77 (126)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHHcC
Confidence            467889999999877 9999999776543            567777766554

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=96.62  E-value=0.0033  Score=55.37  Aligned_cols=17  Identities=35%  Similarity=0.268  Sum_probs=13.9

Q ss_pred             CCceEEEEeCCCccccc
Q 023829           92 LQKLTVVLDLDETLVCA  108 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s  108 (276)
                      .+.++++|||||||+++
T Consensus        19 ~~~kli~~DlDGTLl~~   35 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSP   35 (285)
T ss_dssp             --CCEEEEECCCCCSCT
T ss_pred             CcceEEEEeCcCCCCCC
Confidence            35789999999999985

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=96.55  E-value=0.0048  Score=52.78  Aligned_cols=27  Identities=11%  Similarity=-0.044  Sum_probs=17.6

Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeee
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~  245 (276)
                      +|.++++++.|-|+..-.......|+.
T Consensus       165 ~~~~~~~~~~iGD~~nD~~~~~~ag~~  191 (231)
T 1wr8_A          165 LGIKPKEVAHVGDGENDLDAFKVVGYK  191 (231)
T ss_dssp             HTSCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCCe
Confidence            456778888888887765444444444

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.38  E-value=0.0034  Score=54.03  Aligned_cols=40  Identities=8%  Similarity=-0.055  Sum_probs=33.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      ..|...+.|+.+.+. +.++|.|.-....+..+++.++...
T Consensus        23 i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~   63 (227)
T 1l6r_A           23 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   63 (227)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence            457788899999876 8999999999999999999887654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=96.37  E-value=0.0031  Score=54.81  Aligned_cols=53  Identities=19%  Similarity=0.222  Sum_probs=36.4

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelv  172 (276)
                      .++++|||||||+++..                                          .. |+..++|+.+.+. ..++
T Consensus         5 ~kli~~DlDGTLl~~~~------------------------------------------~i-~~~~eal~~l~~~G~~vv   41 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGKS------------------------------------------RI-PAGERFIERLQEKGIPYM   41 (264)
T ss_dssp             CCEEEECCBTTTEETTE------------------------------------------EC-HHHHHHHHHHHHHTCCEE
T ss_pred             CCEEEEeCCCceEeCCE------------------------------------------EC-cCHHHHHHHHHHCCCeEE
Confidence            57899999999998521                                          13 7788888888876 8888


Q ss_pred             EEccCchhhHHHHHHHh
Q 023829          173 LFTAGLEGYARPLVDRI  189 (276)
Q Consensus       173 I~Ts~~~~yA~~vl~~L  189 (276)
                      +.|+....-...+.+.+
T Consensus        42 l~Tn~~gr~~~~~~~~l   58 (264)
T 3epr_A           42 LVTNNTTRTPESVQEML   58 (264)
T ss_dssp             EEECCCSSCHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHH
Confidence            88854433333333333

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=96.34  E-value=0.004  Score=53.89  Aligned_cols=41  Identities=22%  Similarity=0.290  Sum_probs=30.6

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelv  172 (276)
                      .++++|||||||++...                                           .-|+..+.|+.+.+. ..++
T Consensus         8 ~kli~~DlDGTLl~~~~-------------------------------------------~~~~~~~ai~~l~~~Gi~v~   44 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSVT-------------------------------------------PIPEGVEGVKKLKELGKKII   44 (268)
T ss_dssp             CSEEEEECBTTTEETTE-------------------------------------------ECHHHHHHHHHHHHTTCEEE
T ss_pred             CCEEEEcCcCcEECCCE-------------------------------------------eCcCHHHHHHHHHHcCCeEE
Confidence            57899999999998421                                           235677788888776 7777


Q ss_pred             EEccC
Q 023829          173 LFTAG  177 (276)
Q Consensus       173 I~Ts~  177 (276)
                      +.|..
T Consensus        45 l~Tgr   49 (268)
T 3qgm_A           45 FVSNN   49 (268)
T ss_dssp             EEECC
T ss_pred             EEeCc
Confidence            77774

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=96.28  E-value=0.0061  Score=53.04  Aligned_cols=56  Identities=27%  Similarity=0.231  Sum_probs=40.6

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelv  172 (276)
                      .++++|||||||+++..  .                                        .-|...+.|+.+.+. ..++
T Consensus         5 ~kli~fDlDGTLl~~~~--~----------------------------------------i~~~~~~al~~l~~~G~~~~   42 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK--E----------------------------------------ISSRNRETLIRIQEQGIRLV   42 (279)
T ss_dssp             CCEEEECCCCCCSCTTS--C----------------------------------------CCHHHHHHHHHHHHTTCEEE
T ss_pred             ceEEEEeCCCCCCCCCC--c----------------------------------------cCHHHHHHHHHHHHCCCEEE
Confidence            57899999999998631  1                                        234556667777665 7788


Q ss_pred             EEccCchhhHHHHHHHhcC
Q 023829          173 LFTAGLEGYARPLVDRIDG  191 (276)
Q Consensus       173 I~Ts~~~~yA~~vl~~Ldp  191 (276)
                      +.|.-....+..+++.++.
T Consensus        43 iaTGR~~~~~~~~~~~l~~   61 (279)
T 4dw8_A           43 LASGRPTYGIVPLANELRM   61 (279)
T ss_dssp             EECSSCHHHHHHHHHHTTG
T ss_pred             EEcCCChHHHHHHHHHhCC
Confidence            8887777777777777664

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=96.26  E-value=0.0064  Score=52.45  Aligned_cols=16  Identities=31%  Similarity=0.424  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023829           94 KLTVVLDLDETLVCAY  109 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~  109 (276)
                      .+.+++||||||+++.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CCEEEECTBTTTBCTT
T ss_pred             ceEEEEeCCCCCcCCC
Confidence            4689999999999864

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=96.24  E-value=0.007  Score=52.65  Aligned_cols=58  Identities=16%  Similarity=0.156  Sum_probs=36.9

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelv  172 (276)
                      .++++|||||||+++..                                          ..-+...+.|+.+.+. ..++
T Consensus         5 ~kli~~DlDGTLl~~~~------------------------------------------~i~~~~~~al~~l~~~G~~~~   42 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN------------------------------------------ELAQATIDAVQAAKAQGIKVV   42 (279)
T ss_dssp             CCEEEECC-----------------------------------------------------CHHHHHHHHHHHHTTCEEE
T ss_pred             eEEEEEcCcCCCCCCCC------------------------------------------cCCHHHHHHHHHHHHCCCEEE
Confidence            57899999999998521                                          0234566777787766 8888


Q ss_pred             EEccCchhhHHHHHHHhcCCC
Q 023829          173 LFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       173 I~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      +.|.-....+..+++.++...
T Consensus        43 iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           43 LCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             EECSSCHHHHHHHHHHTTCCS
T ss_pred             EEcCCCHHHHHHHHHHcCCCC
Confidence            888888888888888887653

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.22  E-value=0.0059  Score=56.72  Aligned_cols=57  Identities=23%  Similarity=0.269  Sum_probs=43.8

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023829           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (276)
Q Consensus        92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye  170 (276)
                      .++++++||+||||++..                                           ..=||+.++|+.|.+. +.
T Consensus        11 ~~~~~~l~D~DGvl~~g~-------------------------------------------~~~p~a~~~l~~l~~~g~~   47 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRGK-------------------------------------------KPIAGASDALKLLNRNKIP   47 (352)
T ss_dssp             -CCEEEEECCBTTTEETT-------------------------------------------EECTTHHHHHHHHHHTTCC
T ss_pred             ccCCEEEEECCCeeEcCC-------------------------------------------eeCcCHHHHHHHHHHCCCE
Confidence            368999999999999741                                           0348999999999987 99


Q ss_pred             EEEEccCc----hhhHHHHHHHhcC
Q 023829          171 LILFTAGL----EGYARPLVDRIDG  191 (276)
Q Consensus       171 lvI~Ts~~----~~yA~~vl~~Ldp  191 (276)
                      +++.|++.    +++++.+.+.++.
T Consensus        48 ~~~vTNn~~~~~~~~~~~l~~~lgi   72 (352)
T 3kc2_A           48 YILLTNGGGFSERARTEFISSKLDV   72 (352)
T ss_dssp             EEEECSCCSSCHHHHHHHHHHHHTS
T ss_pred             EEEEeCCCCCCchHHHHHHHHhcCC
Confidence            99999876    5666666555543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=95.17  E-value=0.00082  Score=59.28  Aligned_cols=85  Identities=15%  Similarity=0.288  Sum_probs=70.2

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ..|||+.++|+.|++. +.++|.|+.....++.+++.++...+|..++         +..+.+-++.++.++++|++|.|
T Consensus       136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~---------p~~k~~~~~~l~~~~~~~~~VGD  206 (263)
T 2yj3_A          136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS---------PEDKVRIIEKLKQNGNKVLMIGD  206 (263)
Confidence            4899999999999987 9999999999999999999998877776654         12345566777888899999999


Q ss_pred             CcccccCCCCCeeee
Q 023829          232 NPFSFLLQPLNGIPC  246 (276)
Q Consensus       232 sp~~~~~~p~NgI~V  246 (276)
                      +..-.......|+.|
T Consensus       207 ~~~D~~aa~~Agv~v  221 (263)
T 2yj3_A          207 GVNDAAALALADVSV  221 (263)
Confidence            988777666677654

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.15  E-value=0.0077  Score=52.68  Aligned_cols=17  Identities=24%  Similarity=0.378  Sum_probs=14.2

Q ss_pred             CceEEEEeCCCcccccc
Q 023829           93 QKLTVVLDLDETLVCAY  109 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~  109 (276)
                      ..++++|||||||+++.
T Consensus         5 ~~kli~fDlDGTLl~~~   21 (290)
T 3dnp_A            5 SKQLLALNIDGALLRSN   21 (290)
T ss_dssp             -CCEEEECCCCCCSCTT
T ss_pred             cceEEEEcCCCCCCCCC
Confidence            35789999999999864

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=96.14  E-value=0.012  Score=51.81  Aligned_cols=38  Identities=16%  Similarity=0.127  Sum_probs=30.8

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      |...+.|+.+.+. ..++|.|.-....+..+++.+....
T Consensus        29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            3457788888876 8999999988888999999887654

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.11  E-value=0.0092  Score=52.64  Aligned_cols=16  Identities=31%  Similarity=0.403  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023829           94 KLTVVLDLDETLVCAY  109 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~  109 (276)
                      .+.+++||||||+++.
T Consensus         4 ikli~~DlDGTLl~~~   19 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSK   19 (288)
T ss_dssp             CCEEEEECCCCCSCTT
T ss_pred             eEEEEEeCCCCCCCCC
Confidence            4689999999999863

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.04  E-value=0.0046  Score=53.54  Aligned_cols=15  Identities=27%  Similarity=0.306  Sum_probs=13.4

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      .++++|||||||+++
T Consensus         6 ~kli~~DlDGTLl~~   20 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNG   20 (266)
T ss_dssp             CSEEEEECSSSTTCH
T ss_pred             CCEEEEeCcCceEeC
Confidence            578999999999975

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=95.92  E-value=0.0088  Score=52.62  Aligned_cols=17  Identities=29%  Similarity=0.190  Sum_probs=14.6

Q ss_pred             CceEEEEeCCCcccccc
Q 023829           93 QKLTVVLDLDETLVCAY  109 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~  109 (276)
                      ..+++++||||||+++.
T Consensus        20 ~~kli~~DlDGTLl~~~   36 (283)
T 3dao_A           20 MIKLIATDIDGTLVKDG   36 (283)
T ss_dssp             CCCEEEECCBTTTBSTT
T ss_pred             CceEEEEeCcCCCCCCC
Confidence            56889999999999863

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=95.87  E-value=0.011  Score=51.17  Aligned_cols=16  Identities=25%  Similarity=0.324  Sum_probs=14.1

Q ss_pred             CceEEEEeCCCccccc
Q 023829           93 QKLTVVLDLDETLVCA  108 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s  108 (276)
                      +.++++|||||||+++
T Consensus        16 ~~~~v~~DlDGTLl~~   31 (271)
T 1vjr_A           16 KIELFILDMDGTFYLD   31 (271)
T ss_dssp             GCCEEEECCBTTTEET
T ss_pred             CCCEEEEcCcCcEEeC
Confidence            4678999999999985

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=95.86  E-value=0.0065  Score=52.43  Aligned_cols=16  Identities=31%  Similarity=0.314  Sum_probs=14.2

Q ss_pred             ceEEEEeCCCcccccc
Q 023829           94 KLTVVLDLDETLVCAY  109 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~  109 (276)
                      .+.++|||||||+++.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEV   20 (274)
T ss_dssp             CCEEEECSBTTTBBTT
T ss_pred             ceEEEEECCCCCCCCC
Confidence            5789999999999874

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=95.73  E-value=0.015  Score=50.56  Aligned_cols=34  Identities=21%  Similarity=0.372  Sum_probs=24.7

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      |+..++|+.+.+. ..+++.|+....-...+.+.+
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l   54 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL   54 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            6788888888765 788888877665556666654

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=95.62  E-value=0.022  Score=49.73  Aligned_cols=14  Identities=43%  Similarity=0.527  Sum_probs=12.7

Q ss_pred             eEEEEeCCCccccc
Q 023829           95 LTVVLDLDETLVCA  108 (276)
Q Consensus        95 ~tLVLDLDgTLv~s  108 (276)
                      +++++||||||+++
T Consensus         3 kli~~DlDGTLl~~   16 (268)
T 1nf2_A            3 RVFVFDLDGTLLND   16 (268)
T ss_dssp             CEEEEECCCCCSCT
T ss_pred             cEEEEeCCCcCCCC
Confidence            68999999999985

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=95.62  E-value=0.016  Score=51.03  Aligned_cols=37  Identities=11%  Similarity=0.156  Sum_probs=27.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      |...+.|+.+.+. ..++|.|.-....+..+++.++..
T Consensus        25 ~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~   62 (282)
T 1rkq_A           25 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME   62 (282)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            4456777777766 788888887777788888877654

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=95.47  E-value=0.024  Score=48.99  Aligned_cols=35  Identities=9%  Similarity=0.215  Sum_probs=27.8

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      ..+.|+.+.+. ..++|.|.-....+..+++.++..
T Consensus        22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A           22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            55778888766 888888888888888888888754

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=95.45  E-value=0.018  Score=50.37  Aligned_cols=57  Identities=12%  Similarity=0.043  Sum_probs=39.7

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel  171 (276)
                      ..+.++|||||||++...                                           .-|+..++|+.+.+. ..+
T Consensus        13 ~~k~i~~D~DGtL~~~~~-------------------------------------------~~~~~~~~l~~l~~~g~~~   49 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYNG-------------------------------------------LLPGIENTFDYLKAQGQDY   49 (284)
T ss_dssp             GCSEEEECSBTTTEETTE-------------------------------------------ECTTHHHHHHHHHHTTCEE
T ss_pred             cCCEEEEcCcCCcCcCCe-------------------------------------------eChhHHHHHHHHHHCCCEE
Confidence            467899999999997310                                           237888899998876 889


Q ss_pred             EEEccC---chhhHHHHHHHhcCC
Q 023829          172 ILFTAG---LEGYARPLVDRIDGE  192 (276)
Q Consensus       172 vI~Ts~---~~~yA~~vl~~Ldp~  192 (276)
                      ++.|+.   ........++.+...
T Consensus        50 ~~~Tn~~~r~~~~~~~~l~~lg~~   73 (284)
T 2hx1_A           50 YIVTNDASRSPEQLADSYHKLGLF   73 (284)
T ss_dssp             EEEECCCSSCHHHHHHHHHHTTCT
T ss_pred             EEEeCCCCcCHHHHHHHHHHCCcC
Confidence            999962   333444455555443

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.44  E-value=0.019  Score=50.03  Aligned_cols=18  Identities=33%  Similarity=0.510  Sum_probs=13.7

Q ss_pred             cCCceEEEEeCCCccccc
Q 023829           91 RLQKLTVVLDLDETLVCA  108 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s  108 (276)
                      ..+.+++++||||||+++
T Consensus        10 ~~~~kli~~DlDGTLl~~   27 (262)
T 2fue_A           10 RKERVLCLFDVDGTLTPA   27 (262)
T ss_dssp             ---CEEEEEESBTTTBST
T ss_pred             ccCeEEEEEeCccCCCCC
Confidence            345789999999999985

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=95.29  E-value=0.021  Score=49.17  Aligned_cols=35  Identities=17%  Similarity=0.188  Sum_probs=25.2

Q ss_pred             ccccccccCcCCCcEEEEEcCc-ccccCCCCCeeee
Q 023829          212 HVKDLSCLSKDLCRTLIVDNNP-FSFLLQPLNGIPC  246 (276)
Q Consensus       212 ~~KdL~~L~rd~~~~IiVDDsp-~~~~~~p~NgI~V  246 (276)
                      |.+-++.+|.++++|++|+|++ .-.......|+..
T Consensus       189 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~  224 (264)
T 1yv9_A          189 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDS  224 (264)
T ss_dssp             HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEE
T ss_pred             HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcE
Confidence            4445566788999999999995 6665555566653

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=95.10  E-value=0.029  Score=50.23  Aligned_cols=35  Identities=9%  Similarity=-0.066  Sum_probs=27.2

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHH--HHhc
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLV--DRID  190 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl--~~Ld  190 (276)
                      |...+.|+.+.+. ..++|.|.-....+..++  +.++
T Consensus        48 ~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~   85 (301)
T 2b30_A           48 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLK   85 (301)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhc
Confidence            4456778888766 888888888888888888  8766

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=95.10  E-value=0.027  Score=49.99  Aligned_cols=22  Identities=23%  Similarity=0.452  Sum_probs=17.0

Q ss_pred             CccHHHHHHHhhhc-ceEEEEcc
Q 023829          155 RPGLREFLKQLSEF-ADLILFTA  176 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts  176 (276)
                      -|+..++|+.+.+. +.+++.|+
T Consensus        39 ~~~~~~~l~~l~~~g~~~~~~Tn   61 (306)
T 2oyc_A           39 VPGAPELLERLARAGKAALFVSN   61 (306)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEC
T ss_pred             CcCHHHHHHHHHHCCCeEEEEEC
Confidence            36778888888876 88888885

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=94.95  E-value=0.016  Score=51.50  Aligned_cols=17  Identities=18%  Similarity=0.260  Sum_probs=14.7

Q ss_pred             CceEEEEeCCCcccccc
Q 023829           93 QKLTVVLDLDETLVCAY  109 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~  109 (276)
                      ..++++|||||||+++.
T Consensus        36 ~iKli~fDlDGTLld~~   52 (304)
T 3l7y_A           36 SVKVIATDMDGTFLNSK   52 (304)
T ss_dssp             CCSEEEECCCCCCSCTT
T ss_pred             eeEEEEEeCCCCCCCCC
Confidence            46899999999999864

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=94.93  E-value=0.038  Score=46.80  Aligned_cols=34  Identities=6%  Similarity=0.110  Sum_probs=24.1

Q ss_pred             cccccCcCCCcEEEEEcCc-ccccCCCCCeeeeCc
Q 023829          215 DLSCLSKDLCRTLIVDNNP-FSFLLQPLNGIPCIP  248 (276)
Q Consensus       215 dL~~L~rd~~~~IiVDDsp-~~~~~~p~NgI~V~~  248 (276)
                      -++.+|.++++|+.|.|+. .-.......|+.+--
T Consensus       199 ~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~  233 (271)
T 2x4d_A          199 ALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQ  233 (271)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred             HHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEE
Confidence            3455678999999999998 766555555654443

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=94.83  E-value=0.018  Score=50.18  Aligned_cols=16  Identities=25%  Similarity=0.310  Sum_probs=13.7

Q ss_pred             ceEEEEeCCCcccccc
Q 023829           94 KLTVVLDLDETLVCAY  109 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~  109 (276)
                      .+++++||||||+++.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDA   18 (271)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             ccEEEEeCCCCCCCCC
Confidence            4689999999999863

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=94.81  E-value=0.043  Score=47.06  Aligned_cols=16  Identities=25%  Similarity=0.364  Sum_probs=14.2

Q ss_pred             CceEEEEeCCCccccc
Q 023829           93 QKLTVVLDLDETLVCA  108 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s  108 (276)
                      +++++++||||||+++
T Consensus         5 ~~kli~~DlDGTLl~~   20 (246)
T 2amy_A            5 GPALCLFDVDGTLTAP   20 (246)
T ss_dssp             CSEEEEEESBTTTBCT
T ss_pred             CceEEEEECCCCcCCC
Confidence            4789999999999975

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=94.76  E-value=0.041  Score=47.87  Aligned_cols=46  Identities=13%  Similarity=0.088  Sum_probs=34.1

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023829           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelv  172 (276)
                      .+++++||||||+++.+  .                                        .-|...+.|+.+.+. ..++
T Consensus         4 ~kli~~DlDGTLl~~~~--~----------------------------------------i~~~~~~~l~~l~~~g~~~~   41 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRL--C----------------------------------------QTDEMRALIKRARGAGFCVG   41 (246)
T ss_dssp             SEEEEECSBTTTBSTTS--C----------------------------------------CCHHHHHHHHHHHHTTCEEE
T ss_pred             ceEEEEeCcCCcCCCCC--c----------------------------------------cCHHHHHHHHHHHHCCCEEE
Confidence            68899999999998521  0                                        235567778888877 8888


Q ss_pred             EEccCchhh
Q 023829          173 LFTAGLEGY  181 (276)
Q Consensus       173 I~Ts~~~~y  181 (276)
                      |.|......
T Consensus        42 iaTGR~~~~   50 (246)
T 3f9r_A           42 TVGGSDFAK   50 (246)
T ss_dssp             EECSSCHHH
T ss_pred             EECCCCHHH
Confidence            888776654

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=94.75  E-value=0.014  Score=50.50  Aligned_cols=15  Identities=33%  Similarity=0.419  Sum_probs=13.2

Q ss_pred             eEEEEeCCCcccccc
Q 023829           95 LTVVLDLDETLVCAY  109 (276)
Q Consensus        95 ~tLVLDLDgTLv~s~  109 (276)
                      +.+++||||||+++.
T Consensus         3 kli~~DlDGTLl~~~   17 (261)
T 2rbk_A            3 KALFFDIDGTLVSFE   17 (261)
T ss_dssp             CEEEECSBTTTBCTT
T ss_pred             cEEEEeCCCCCcCCC
Confidence            689999999999863

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=94.24  E-value=0.034  Score=47.87  Aligned_cols=16  Identities=31%  Similarity=0.395  Sum_probs=13.9

Q ss_pred             CceEEEEeCCCccccc
Q 023829           93 QKLTVVLDLDETLVCA  108 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s  108 (276)
                      ..++++|||||||+++
T Consensus        11 miKli~~DlDGTLl~~   26 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSF   26 (268)
T ss_dssp             CCCEEEECSBTTTBCT
T ss_pred             ceEEEEEeCCCCCcCC
Confidence            4689999999999983

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=94.17  E-value=0.036  Score=47.79  Aligned_cols=14  Identities=43%  Similarity=0.541  Sum_probs=12.4

Q ss_pred             eEEEEeCCCccccc
Q 023829           95 LTVVLDLDETLVCA  108 (276)
Q Consensus        95 ~tLVLDLDgTLv~s  108 (276)
                      ..+++||||||+++
T Consensus         4 ~li~~DlDGTLl~~   17 (244)
T 1s2o_A            4 LLLISDLDNTWVGD   17 (244)
T ss_dssp             EEEEECTBTTTBSC
T ss_pred             eEEEEeCCCCCcCC
Confidence            48999999999984

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=92.94  E-value=0.099  Score=45.05  Aligned_cols=13  Identities=46%  Similarity=0.496  Sum_probs=11.8

Q ss_pred             EEEEeCCCccccc
Q 023829           96 TVVLDLDETLVCA  108 (276)
Q Consensus        96 tLVLDLDgTLv~s  108 (276)
                      +++|||||||+++
T Consensus         2 li~~DlDGTLl~~   14 (259)
T 3zx4_A            2 IVFTDLDGTLLDE   14 (259)
T ss_dssp             EEEECCCCCCSCS
T ss_pred             EEEEeCCCCCcCC
Confidence            6899999999985

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=91.88  E-value=0.12  Score=44.31  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=24.0

Q ss_pred             CccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh
Q 023829          155 RPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       155 RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      -|...+.|+.+.+.-.++|.|.-....+..+++.+
T Consensus        25 ~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A           25 DAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS
T ss_pred             CHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc
Confidence            45677888888765566677766666677666554

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=91.12  E-value=0.0023  Score=55.34  Aligned_cols=27  Identities=7%  Similarity=-0.214  Sum_probs=20.6

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhh
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGY  181 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~y  181 (276)
                      ..|++.++|+.|.+.+.+ |.|++...+
T Consensus       127 ~~~~~~~~l~~l~~g~~~-i~tn~~~~~  153 (264)
T 1yv9_A          127 SYEKVVLATLAIQKGALF-IGTNPDKNI  153 (264)
T ss_dssp             CHHHHHHHHHHHHTTCEE-EESCCCSEE
T ss_pred             CHHHHHHHHHHHhCCCEE-EEECCCCcc
Confidence            568889999999765776 778877643

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=89.88  E-value=0.09  Score=43.20  Aligned_cols=16  Identities=25%  Similarity=0.106  Sum_probs=13.7

Q ss_pred             ceEEEEeCCCcccccc
Q 023829           94 KLTVVLDLDETLVCAY  109 (276)
Q Consensus        94 k~tLVLDLDgTLv~s~  109 (276)
                      .+.++|||||||+++.
T Consensus         4 ~k~i~fDlDGTL~d~~   19 (235)
T 2om6_A            4 VKLVTFDVWNTLLDLN   19 (235)
T ss_dssp             CCEEEECCBTTTBCHH
T ss_pred             ceEEEEeCCCCCCCcc
Confidence            4689999999999863

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=89.67  E-value=0.096  Score=43.97  Aligned_cols=15  Identities=40%  Similarity=0.547  Sum_probs=13.3

Q ss_pred             eEEEEeCCCcccccc
Q 023829           95 LTVVLDLDETLVCAY  109 (276)
Q Consensus        95 ~tLVLDLDgTLv~s~  109 (276)
                      +.++|||||||+++.
T Consensus         3 k~iiFDlDGTL~d~~   17 (241)
T 2hoq_A            3 KVIFFDLDDTLVDTS   17 (241)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEEcCCCCCCCCh
Confidence            589999999999864

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=89.37  E-value=0.12  Score=46.56  Aligned_cols=39  Identities=15%  Similarity=0.120  Sum_probs=33.0

Q ss_pred             eeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcC
Q 023829          153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDG  191 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp  191 (276)
                      ..+|++.++|+.+.+.+.+.|+|.....|+..+++.+..
T Consensus       103 ~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A          103 KFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             CBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHcCCcEEEEECCceEEEcccchhhhh
Confidence            468999999999988777899999888999888877643

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=88.62  E-value=0.0051  Score=53.96  Aligned_cols=102  Identities=11%  Similarity=0.013  Sum_probs=67.2

Q ss_pred             cHHHHHHHhhhc-ceEEEEccCchhhH--H--HHHHHhcCCCceeEEEECCCccccCCc--ccccccccc----CcCCCc
Q 023829          157 GLREFLKQLSEF-ADLILFTAGLEGYA--R--PLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL----SKDLCR  225 (276)
Q Consensus       157 gl~eFL~~l~~~-yelvI~Ts~~~~yA--~--~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L----~rd~~~  225 (276)
                      ...+.++.|++. +. +|.|++...+.  +  .+++......+|..++..+.+...|+.  .|.+-++.+    |.++++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~  227 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE  227 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence            567777788665 77 99999988776  3  112333333456666666666555554  577888889    999999


Q ss_pred             EEEEEcCc-ccccCCCCCeeeeCccCCCCCCChHH
Q 023829          226 TLIVDNNP-FSFLLQPLNGIPCIPFSAGQPHDNQV  259 (276)
Q Consensus       226 ~IiVDDsp-~~~~~~p~NgI~V~~f~~g~~~D~eL  259 (276)
                      +++|+|++ .-.......|+...-+..|.....+|
T Consensus       228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l  262 (284)
T 2hx1_A          228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDA  262 (284)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGH
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHH
Confidence            99999996 66666666677655443343333334

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=87.72  E-value=0.16  Score=44.36  Aligned_cols=15  Identities=27%  Similarity=0.286  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      -+.++|||||||+++
T Consensus        31 ikaviFDlDGTLvDs   45 (253)
T 2g80_A           31 YSTYLLDIEGTVCPI   45 (253)
T ss_dssp             CSEEEECCBTTTBCT
T ss_pred             CcEEEEcCCCCcccc
Confidence            478999999999996

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=84.77  E-value=0.27  Score=42.71  Aligned_cols=15  Identities=20%  Similarity=0.282  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      .+.++|||||||+++
T Consensus        10 ikaviFDlDGTL~ds   24 (261)
T 1yns_A           10 VTVILLDIEGTTTPI   24 (261)
T ss_dssp             CCEEEECCBTTTBCH
T ss_pred             CCEEEEecCCCccch
Confidence            578999999999985

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=84.16  E-value=0.013  Score=52.04  Aligned_cols=97  Identities=15%  Similarity=-0.006  Sum_probs=62.0

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhH--H-HHHHHhc-CCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGYA--R-PLVDRID-GENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA--~-~vl~~Ld-p~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      ..|++.++|+.+.+..-++|.|++...+.  . .++...+ ...+|....+.+.+...|+.  .+.+-++.+|.++++|+
T Consensus       157 ~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e~l  236 (306)
T 2oyc_A          157 SFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTL  236 (306)
T ss_dssp             CHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGGEE
T ss_pred             CHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHHEE
Confidence            35899999999987633999999887654  1 1111111 11234444444555444444  56677788999999999


Q ss_pred             EEEcCc-ccccCCCCCeeeeCccC
Q 023829          228 IVDNNP-FSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       228 iVDDsp-~~~~~~p~NgI~V~~f~  250 (276)
                      +|.|++ .-.......|+.+--..
T Consensus       237 ~vGD~~~~Di~~a~~aG~~~i~v~  260 (306)
T 2oyc_A          237 MVGDRLETDILFGHRCGMTTVLTL  260 (306)
T ss_dssp             EEESCTTTHHHHHHHHTCEEEEES
T ss_pred             EECCCchHHHHHHHHCCCeEEEEC
Confidence            999997 66655555666554433

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=83.78  E-value=0.018  Score=50.00  Aligned_cols=89  Identities=6%  Similarity=-0.177  Sum_probs=56.2

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhH--HHHHHH-hcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGYA--RPLVDR-IDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA--~~vl~~-Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ..|++.+.|+.|.+.+.+ |.|++...+.  +.++.. .....+|...+.++.+...|+.  .|.+-++.  .+++++++
T Consensus       131 ~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~  207 (263)
T 1zjj_A          131 TYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWM  207 (263)
T ss_dssp             BHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEE
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEE
Confidence            468999999999965887 8999988665  222111 1111234444555555444554  34455555  78899999


Q ss_pred             EEcCc-ccccCCCCCeee
Q 023829          229 VDNNP-FSFLLQPLNGIP  245 (276)
Q Consensus       229 VDDsp-~~~~~~p~NgI~  245 (276)
                      |.|++ .-+......|+.
T Consensus       208 VGD~~~~Di~~A~~aG~~  225 (263)
T 1zjj_A          208 VGDRLDTDIAFAKKFGMK  225 (263)
T ss_dssp             EESCTTTHHHHHHHTTCE
T ss_pred             ECCChHHHHHHHHHcCCe
Confidence            99996 555555555654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=82.27  E-value=0.016  Score=50.02  Aligned_cols=95  Identities=12%  Similarity=-0.117  Sum_probs=57.8

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhHHH---HHHHhcCCCceeEEEECCC-ccccCCc--cccccccccCcCCCcEE
Q 023829          154 ERPGLREFLKQLSEFADLILFTAGLEGYARP---LVDRIDGENLFSLRLYRPS-TTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~---vl~~Ldp~~~f~~rl~r~~-c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      ..|++.++|+.+...+.+ |.|++...+...   +++..+...+|+...+.+. +...++.  .+.+-++.+|.++++|+
T Consensus       138 ~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i  216 (271)
T 1vjr_A          138 TYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMA  216 (271)
T ss_dssp             CHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEE
T ss_pred             CHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEE
Confidence            458999999999555777 888876654321   1111111123333334444 3333333  46667788899999999


Q ss_pred             EEEcCc-ccccCCCCCeeeeCcc
Q 023829          228 IVDNNP-FSFLLQPLNGIPCIPF  249 (276)
Q Consensus       228 iVDDsp-~~~~~~p~NgI~V~~f  249 (276)
                      .|.|++ .-.......|+.+--.
T Consensus       217 ~iGD~~~nDi~~a~~aG~~~i~v  239 (271)
T 1vjr_A          217 MVGDRLYTDVKLGKNAGIVSILV  239 (271)
T ss_dssp             EEESCHHHHHHHHHHHTCEEEEE
T ss_pred             EECCCcHHHHHHHHHcCCeEEEE
Confidence            999995 6655555566655443

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=81.51  E-value=0.56  Score=41.11  Aligned_cols=17  Identities=24%  Similarity=0.227  Sum_probs=14.4

Q ss_pred             CceEEEEeCCCcccccc
Q 023829           93 QKLTVVLDLDETLVCAY  109 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~  109 (276)
                      +-++|+||+||||+++.
T Consensus        31 ~i~~viFD~dGTL~ds~   47 (287)
T 3a1c_A           31 KVTAVIFDKTGTLTKGK   47 (287)
T ss_dssp             HCCEEEEECCCCCBCSC
T ss_pred             cCCEEEEeCCCCCcCCC
Confidence            35789999999999964

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	276
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	2e-33

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 2e-33
 Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 21/183 (11%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
              +   K+ VV+DLDETLV    +S  PV   +      +     +             
Sbjct: 8   AKAQDSDKICVVIDLDETLVH---SSFKPVNNADFIIPVEIDGVVHQVY----------- 53

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
                V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 54  -----VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 108

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTNVTLL 266
                +VKDLS L +DL R LI+DN+P S++  P N +P   +      D ++   +   
Sbjct: 109 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF-DNMSDTELHDLLPFF 166

Query: 267 KFL 269
           + L
Sbjct: 167 EQL 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	276
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.33
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.26
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.19
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.11
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.11
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.09
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	98.99
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.93
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.92
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.92
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.89
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.88
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.85
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.84
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	98.83
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.81
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	98.66
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.58
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.49
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.47
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.42
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.41
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.15
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.91
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.78
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.67
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.67
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.16
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.13
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.0
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	96.93
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.79
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	96.76
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.57
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	96.55
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	96.5
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.32
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	96.29
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	96.28
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.12
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	96.07
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.05
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	95.95
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.72
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	95.52
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	95.5
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	95.34
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	95.2
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.08
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	94.46
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	92.99
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	89.88
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	88.84
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	88.34
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	85.11
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	83.8

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-42  Score=292.41  Aligned_cols=165  Identities=33%  Similarity=0.486  Sum_probs=141.7

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023829           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA  169 (276)
Q Consensus        90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y  169 (276)
                      ...+|++||||||||||||.....   ...         .|.+..       ........+++++|||+++||++|+++|
T Consensus        11 ~~~~k~~LVLDLDeTLihs~~~~~---~~~---------~~~~~~-------~~~~~~~~~~v~~RP~l~eFL~~l~~~y   71 (181)
T d1ta0a_          11 QDSDKICVVIDLDETLVHSSFKPV---NNA---------DFIIPV-------EIDGVVHQVYVLKRPHVDEFLQRMGELF   71 (181)
T ss_dssp             GGTTSCEEEECCBTTTEEEESSCC---TTC---------SEEEEE-------EETTEEEEEEEEECTTHHHHHHHHHHHS
T ss_pred             ccCCCeEEEEeCCCCEEccccCCC---CCc---------cceeee-------cccceeeeeEEecCCCHHHHHHHHHhce
Confidence            344799999999999999854221   000         011110       0112234678999999999999999999


Q ss_pred             eEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCcc
Q 023829          170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       170 elvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      ||+|||+|+++||++|++.|||.+.|.++++|++|...+ +.++|||+++|+++++||||||++.+|..||+|||+|++|
T Consensus        72 ei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~-~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I~~f  150 (181)
T d1ta0a_          72 ECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASW  150 (181)
T ss_dssp             EEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEET-TEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecC-CcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEecCc
Confidence            999999999999999999999999999999999998764 6789999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHhHHHHHHHHhhhcCCC
Q 023829          250 SAGQPHDNQVLTNVTLLKFLLSSLNH  275 (276)
Q Consensus       250 ~~g~~~D~eL~~l~~~L~~La~~~d~  275 (276)
                      . |+++|++|..|+++|++|++.+||
T Consensus       151 ~-~~~~D~eL~~l~~~L~~l~~~~DV  175 (181)
T d1ta0a_         151 F-DNMSDTELHDLLPFFEQLSRVDDV  175 (181)
T ss_dssp             S-SCTTCCHHHHHHHHHHHHTTCSCH
T ss_pred             C-CCCCcHHHHHHHHHHHHHccCCcH
Confidence            7 889999999999999999999997

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=6e-13  Score=108.69  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=82.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~-~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV  229 (276)
                      +.+.||+.++|+.|++. +.++|.|++. ..+++.+++.+....+|..+.....   .+...+.+-++.+|.+++++|+|
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~k---p~~~~~~~~~~~~~~~~~~~l~i  121 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG---SKVTHFERLHHKTGVPFSQMVFF  121 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSS---CHHHHHHHHHHHHCCCGGGEEEE
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecccC---CChHHHHHHHHHhCCChHHEEEE
Confidence            66899999999999988 9999999765 4778888898888888877654332   12235777788899999999999


Q ss_pred             EcCcccccCCCCCeeeeCccCCCCCCChHHh
Q 023829          230 DNNPFSFLLQPLNGIPCIPFSAGQPHDNQVL  260 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~~g~~~D~eL~  260 (276)
                      ||++.........|+.+.-...|- +..++.
T Consensus       122 gD~~~di~aA~~aG~~~i~v~~G~-~~~~~~  151 (164)
T d1u7pa_         122 DDENRNIIDVGRLGVTCIHIRDGM-SLQTLT  151 (164)
T ss_dssp             ESCHHHHHHHHTTTCEEEECSSCC-CHHHHH
T ss_pred             cCCHHHHHHHHHcCCEEEEECCCC-ChHHHH
Confidence            999999988888999887765453 334443

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=1.2e-12  Score=109.51  Aligned_cols=97  Identities=12%  Similarity=0.040  Sum_probs=85.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ..||+.++|+.|++. +.++|.|++.+.+++.+++.++..++|..+++.++....|+.  .|.+-++++|.+++++++|+
T Consensus        89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~ig  168 (218)
T d1te2a_          89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALE  168 (218)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEE
T ss_pred             ccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEEe
Confidence            679999999999977 999999999999999999999999999999999887666654  57888999999999999999


Q ss_pred             cCcccccCCCCCeeeeCccC
Q 023829          231 NNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       231 Dsp~~~~~~p~NgI~V~~f~  250 (276)
                      |++.........|+.+.-+.
T Consensus       169 D~~~di~aA~~~G~~~i~v~  188 (218)
T d1te2a_         169 DSVNGMIASKAARMRSIVVP  188 (218)
T ss_dssp             SSHHHHHHHHHTTCEEEECC
T ss_pred             eCHHHHHHHHHcCCEEEEEC
Confidence            99988777777787765543

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.19  E-value=4.7e-13  Score=111.69  Aligned_cols=96  Identities=9%  Similarity=0.006  Sum_probs=83.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      +...||+.++|+.|++.+.++|.|++....++.+++.++..++|..+++.++....|+.  .+.+.++++|.++++||+|
T Consensus        81 ~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~V  160 (207)
T d2hdoa1          81 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI  160 (207)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred             cccccchhhhhhhhcccccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeEe
Confidence            45789999999999988999999999999999999999998999999998887766654  5788888999999999999


Q ss_pred             EcCcccccCCCCCeeeeC
Q 023829          230 DNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~  247 (276)
                      +|++.........|+.+.
T Consensus       161 gDs~~Di~~a~~aG~~~i  178 (207)
T d2hdoa1         161 GDSVSDEQTAQAANVDFG  178 (207)
T ss_dssp             ESSHHHHHHHHHHTCEEE
T ss_pred             cCCHHHHHHHHHcCCeEE
Confidence            999988776666777644

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.11  E-value=2.7e-12  Score=106.68  Aligned_cols=98  Identities=14%  Similarity=0.137  Sum_probs=84.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ....||+.++|+.+++.+.++|.|++...+++.+++.++...+|..++..+.....+...+.+.++++|.+++++|+|.|
T Consensus        83 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGD  162 (210)
T d2ah5a1          83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD  162 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred             ccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccceeecC
Confidence            55899999999999999999999999999999999999999999999887775544444677888899999999999999


Q ss_pred             CcccccCCCCCeeeeCcc
Q 023829          232 NPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       232 sp~~~~~~p~NgI~V~~f  249 (276)
                      +...+......|+++--.
T Consensus       163 s~~Di~aa~~aGi~~i~v  180 (210)
T d2ah5a1         163 TKFDMLGARETGIQKLAI  180 (210)
T ss_dssp             SHHHHHHHHHHTCEEEEE
T ss_pred             CHHHHHHHHHcCCeEEEE
Confidence            998877777778765544

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.11  E-value=1e-11  Score=102.99  Aligned_cols=98  Identities=19%  Similarity=0.168  Sum_probs=81.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      +.+.||+.++|+.|++. +.++|.|++.. .+..+++.++..++|..+++.+.....|+.  .|.+-++.+|.++++|++
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~  159 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  159 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEE
Confidence            45789999999999987 99999998765 678899999999999999988776665544  577888889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCccC
Q 023829          229 VDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      |+|++.........|+..--+.
T Consensus       160 VgD~~~Di~~A~~~G~~~i~v~  181 (204)
T d2go7a1         160 IGDRTLDVEFAQNSGIQSINFL  181 (204)
T ss_dssp             EESSHHHHHHHHHHTCEEEESS
T ss_pred             EeCCHHHHHHHHHcCCeEEEEc
Confidence            9999988777777777654443

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.09  E-value=3.7e-12  Score=106.09  Aligned_cols=98  Identities=15%  Similarity=0.085  Sum_probs=84.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ..+.||+.++|++|++. +.++|.|++.+.+++.+++.++..++|..+++.+.....++.  .+.+.++.++.+++++++
T Consensus        94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~  173 (224)
T d2hsza1          94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  173 (224)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccch
Confidence            55889999999999987 999999999999999999999999999999998877665554  577888889999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |+|++..+......|+.+.-.
T Consensus       174 igD~~~Di~~A~~aG~~~i~v  194 (224)
T d2hsza1         174 VGDSQNDIFAAHSAGCAVVGL  194 (224)
T ss_dssp             EESSHHHHHHHHHHTCEEEEE
T ss_pred             hcCcHHHHHHHHHcCCeEEEE
Confidence            999998877666666654443

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.99  E-value=1.1e-10  Score=98.58  Aligned_cols=98  Identities=16%  Similarity=0.042  Sum_probs=82.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ...+||+.++|+.|++.|.++|.|++...+.+.+++.++..++|..+++.+++...|+.  .|.+-++++|.++++|++|
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v  178 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV  178 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccccee
Confidence            45789999999999988999999999999999999999999999999998877766654  5888889999999999999


Q ss_pred             EcCccc-ccCCCCCeeeeCcc
Q 023829          230 DNNPFS-FLLQPLNGIPCIPF  249 (276)
Q Consensus       230 DDsp~~-~~~~p~NgI~V~~f  249 (276)
                      +|++.. .......|+.+.-+
T Consensus       179 gD~~~~Di~~A~~~G~~~v~v  199 (230)
T d1x42a1         179 GDNPVKDCGGSKNLGMTSILL  199 (230)
T ss_dssp             ESCTTTTHHHHHTTTCEEEEE
T ss_pred             ecCcHhHHHHHHHcCCEEEEE
Confidence            998754 55555566655433

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.93  E-value=1.4e-10  Score=91.74  Aligned_cols=133  Identities=14%  Similarity=0.123  Sum_probs=84.8

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-c
Q 023829           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A  169 (276)
Q Consensus        91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-y  169 (276)
                      +.+++++|||+||||+++.+...                |...            ..  ......||+.++|+.+.+. |
T Consensus         4 ~~kpk~vifDiDgTL~~~~~~~~----------------~~~~------------~~--~~~~~~p~v~~~l~~l~~~G~   53 (149)
T d1ltqa1           4 PGKPKAVIFDVDGTLAKMNGRGP----------------YDLE------------KC--DTDVINPMVVELSKMYALMGY   53 (149)
T ss_dssp             TTSCEEEEEETBTTTBCCSSCCT----------------TCGG------------GG--GGCCBCHHHHHHHHHHHHTTC
T ss_pred             CCCCcEEEEEcCCCcEeCCCCCc----------------CCcc------------cc--ccCccCHHHHHHHHHHHhccC
Confidence            45789999999999998643211                0000            00  0023689999999999987 9


Q ss_pred             eEEEEccCchhhHHHHHHHhcC--------CC-ceeEEEECCCccccCCccc-cccccccCcCCCcE-EEEEcCcccccC
Q 023829          170 DLILFTAGLEGYARPLVDRIDG--------EN-LFSLRLYRPSTTSTEYREH-VKDLSCLSKDLCRT-LIVDNNPFSFLL  238 (276)
Q Consensus       170 elvI~Ts~~~~yA~~vl~~Ldp--------~~-~f~~rl~r~~c~~~k~~~~-~KdL~~L~rd~~~~-IiVDDsp~~~~~  238 (276)
                      +|++.|+-...+.+...+.|..        .+ .+.....+..+...+.... ..-+..+..+..++ ++|||++.....
T Consensus        54 ~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a  133 (149)
T d1ltqa1          54 QIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEM  133 (149)
T ss_dssp             EEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHH
T ss_pred             eEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHH
Confidence            9999999887766655555532        12 2344455555443322222 12233445555665 567999999988


Q ss_pred             CCCCeeeeCccCCCC
Q 023829          239 QPLNGIPCIPFSAGQ  253 (276)
Q Consensus       239 ~p~NgI~V~~f~~g~  253 (276)
                      ...+||+|-.-..|+
T Consensus       134 ~~~~Gi~~~~V~~Gd  148 (149)
T d1ltqa1         134 WRRIGVECWQVASGD  148 (149)
T ss_dssp             HHHTTCCEEECSCCC
T ss_pred             HHHCCCcEEEeCCCC
Confidence            888999987665443

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.92  E-value=2.1e-10  Score=96.37  Aligned_cols=96  Identities=15%  Similarity=0.145  Sum_probs=77.4

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--ccc---ccccccCcCCC
Q 023829          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHV---KDLSCLSKDLC  224 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~---KdL~~L~rd~~  224 (276)
                      ...-||+.++|+.|++.  +.++|.|++....+..+++.++...+|..+.+.++....++.  .+.   +.+...+.+++
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~  169 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  169 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChh
Confidence            45679999999999875  789999999999999999999999999999988876554432  223   33333477899


Q ss_pred             cEEEEEcCcccccCCCCCeeeeC
Q 023829          225 RTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       225 ~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      +||+|.|++........+|+.+.
T Consensus       170 ~~l~VGD~~~Di~aA~~aG~~~i  192 (228)
T d2hcfa1         170 QIVIIGDTEHDIRCARELDARSI  192 (228)
T ss_dssp             GEEEEESSHHHHHHHHTTTCEEE
T ss_pred             HheeecCChHHHHHHHHcCCEEE
Confidence            99999999998877778887654

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.92  E-value=2.6e-11  Score=101.36  Aligned_cols=99  Identities=11%  Similarity=0.145  Sum_probs=79.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEEC-CCc--cccCC--ccccccccccCcCCCcE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-PST--TSTEY--REHVKDLSCLSKDLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r-~~c--~~~k~--~~~~KdL~~L~rd~~~~  226 (276)
                      ....||+.++|+.+..  ..+|.|++...+++.+++.++..++|...++. ++.  ...|+  ..|.+-++.+|.++++|
T Consensus        84 ~~~~~g~~~~L~~l~~--~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~  161 (222)
T d2fdra1          84 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV  161 (222)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             cchhhhHHHHhhhccc--cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceE
Confidence            5589999999999865  56789999999999999999999998765442 221  11233  36889999999999999


Q ss_pred             EEEEcCcccccCCCCCeeeeCccCCC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCIPFSAG  252 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~~f~~g  252 (276)
                      |+|+|++.........|+.+--+..|
T Consensus       162 l~vgDs~~dv~aA~~aG~~~i~v~~~  187 (222)
T d2fdra1         162 VVVEDSVHGIHGARAAGMRVIGFTGA  187 (222)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEEccC
Confidence            99999999888888889887766543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.89  E-value=1.7e-10  Score=94.79  Aligned_cols=95  Identities=11%  Similarity=0.130  Sum_probs=77.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ...||+.++|+.+++. +.++|.|++.+ .+..+++.++..++|..+++.++....|+.  .|..-++.++.  +++|+|
T Consensus        79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~v  155 (187)
T d2fi1a1          79 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVI  155 (187)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEE
T ss_pred             cccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEE
Confidence            4679999999999987 99999998766 555689999999999999988776655544  46666666764  569999


Q ss_pred             EcCcccccCCCCCeeeeCccC
Q 023829          230 DNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +|++........+|+.+.-++
T Consensus       156 gDs~~Di~aA~~aG~~~i~v~  176 (187)
T d2fi1a1         156 GDRPIDIEAGQAAGLDTHLFT  176 (187)
T ss_dssp             ESSHHHHHHHHHTTCEEEECS
T ss_pred             eCCHHHHHHHHHcCCEEEEEC
Confidence            999998888888999988776

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.88  E-value=7.6e-11  Score=98.41  Aligned_cols=96  Identities=13%  Similarity=0.114  Sum_probs=79.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....||+.++|+.|++. +.+++.|++  ..+..+++.++..++|..+++.++....|+.  .|.+-++.+|.++++||+
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~  167 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             ccccCCceeccccccccccceEEEeec--chhhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceEEE
Confidence            34789999999999977 888888875  5688999999999999999998887766654  588999999999999999


Q ss_pred             EEcCcccccCCCCCeeeeCcc
Q 023829          229 VDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V~~f  249 (276)
                      |+|++.........|+.+.-+
T Consensus       168 VgD~~~di~~A~~aG~~~i~v  188 (221)
T d1o08a_         168 LEDSQAGIQAIKDSGALPIGV  188 (221)
T ss_dssp             EESSHHHHHHHHHHTCEEEEE
T ss_pred             EecCHHHHHHHHHcCCEEEEE
Confidence            999998776666666654443

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=3.6e-10  Score=93.75  Aligned_cols=111  Identities=7%  Similarity=-0.125  Sum_probs=86.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCC
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLC  224 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~  224 (276)
                      ...+||+.++|..|++. +.++|.|++    ...+.+.++...+..++|..+++.+++...|+.  .|.+-++.++.+++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~  175 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN  175 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcc
Confidence            45899999999999987 999999974    444566667777888899999998877766665  68889999999999


Q ss_pred             cEEEEEcCcccccCCCCCeeeeCccCCCCCCChHHhHH
Q 023829          225 RTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQVLTN  262 (276)
Q Consensus       225 ~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~eL~~l  262 (276)
                      +||+|+|+..........|+...-+..++..-++|.++
T Consensus       176 ~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~  213 (222)
T d1cr6a1         176 EVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKV  213 (222)
T ss_dssp             SEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHHH
T ss_pred             eEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHHh
Confidence            99999999988877778888766554333223344443

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.84  E-value=8.5e-10  Score=91.42  Aligned_cols=95  Identities=15%  Similarity=0.090  Sum_probs=83.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii  228 (276)
                      ....|++.++|+.+.+. +.+++.|++...+++.+++......+|..+++.+++...|+.  .|.+-++++|.++++|++
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~  171 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  171 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence            45789999999999866 999999999999999999999999999999999988887775  688889999999999999


Q ss_pred             EEcCcccccCCCCCeeee
Q 023829          229 VDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       229 VDDsp~~~~~~p~NgI~V  246 (276)
                      |+|++.........|+..
T Consensus       172 VgD~~~Di~~A~~aG~~~  189 (220)
T d1zrna_         172 VASNAWDATGARYFGFPT  189 (220)
T ss_dssp             EESCHHHHHHHHHHTCCE
T ss_pred             EecChHhHHHHHHcCCEE
Confidence            999998776666667654

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=98.83  E-value=1.3e-10  Score=99.37  Aligned_cols=96  Identities=9%  Similarity=-0.023  Sum_probs=81.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCccccCCc--cccccccccCc-CCCcE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRT  226 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~k~~--~~~KdL~~L~r-d~~~~  226 (276)
                      ....||+.++|+.|++. +.++|.|++...+++.+++.++..++| ..+++.+++...|+.  .|.+.++++|. +.++|
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~  177 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM  177 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceE
Confidence            35799999999999987 999999999999999999999988877 567777777666654  68999999997 56999


Q ss_pred             EEEEcCcccccCCCCCeeeeC
Q 023829          227 LIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      |+|+|+..........|+.+.
T Consensus       178 v~VgDs~~Di~aA~~aG~~ti  198 (257)
T d1swva_         178 IKVGDTVSDMKEGRNAGMWTV  198 (257)
T ss_dssp             EEEESSHHHHHHHHHTTSEEE
T ss_pred             EEEeCChhhHHHHHHCCCEEE
Confidence            999999988877777777654

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=8.6e-10  Score=93.35  Aligned_cols=119  Identities=13%  Similarity=0.108  Sum_probs=92.7

Q ss_pred             eeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829          153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD  230 (276)
                      ...||+.++|+.|++.+.++|.|++.....+.+++..+...+|..+++.+++...|+.  .|.+-++++|.+++++++|.
T Consensus       109 ~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iG  188 (247)
T d2gfha1         109 ILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVG  188 (247)
T ss_dssp             CCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             ccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcceec
Confidence            4679999999999999999999999999999999999998999999998888777765  57888889999999999999


Q ss_pred             cCccc-ccCCCCCeeeeCccCCC---CC------CC---hHHhHHHHHHHHhhh
Q 023829          231 NNPFS-FLLQPLNGIPCIPFSAG---QP------HD---NQVLTNVTLLKFLLS  271 (276)
Q Consensus       231 Dsp~~-~~~~p~NgI~V~~f~~g---~~------~D---~eL~~l~~~L~~La~  271 (276)
                      |+... +.....+|+...-|..+   .+      .|   ..|.+|..+|+++-.
T Consensus       189 D~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i~~  242 (247)
T d2gfha1         189 DTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSIDC  242 (247)
T ss_dssp             SCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHTT
T ss_pred             cChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHHHhh
Confidence            99753 65566677752222111   00      11   246677778877643

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=98.66  E-value=7.8e-09  Score=86.68  Aligned_cols=95  Identities=14%  Similarity=0.093  Sum_probs=82.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV  229 (276)
                      ....|++.+.|+.+.. +.+++.|++...+++.+++.++...+|..+++.++....|+.  .|.+-++++|.++++||+|
T Consensus        92 ~~~~~~~~~~L~~l~~-~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~V  170 (245)
T d1qq5a_          92 LTPYPDAAQCLAELAP-LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV  170 (245)
T ss_dssp             CCBCTTHHHHHHHHTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred             cccchhhhHHHHHHhh-hceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEEE
Confidence            3467999999998864 678999999999999999999998999999999888877765  6889999999999999999


Q ss_pred             EcCcccccCCCCCeeeeC
Q 023829          230 DNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       230 DDsp~~~~~~p~NgI~V~  247 (276)
                      +|++.........|+..-
T Consensus       171 gD~~~di~~A~~aG~~tv  188 (245)
T d1qq5a_         171 SSNGFDVGGAKNFGFSVA  188 (245)
T ss_dssp             ESCHHHHHHHHHHTCEEE
T ss_pred             eCCHHHHHHHHHcCCeEE
Confidence            999988877777787653

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.8e-09  Score=88.47  Aligned_cols=99  Identities=8%  Similarity=-0.114  Sum_probs=80.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHH----HhcCCCceeEEEECCCccccCCc--cccccccccCcCCC
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD----RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLC  224 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~----~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~  224 (276)
                      ...+||+.++|..|.+. +.++|.|++....+...++    ..+..++|..+++.+++...|+.  .|.+-++.+|.+++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~  177 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS  177 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc
Confidence            45899999999999977 9999999887665544443    34455789999998877766665  67888999999999


Q ss_pred             cEEEEEcCcccccCCCCCeeeeCccC
Q 023829          225 RTLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       225 ~~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      +||+|+|++.........|+...-+.
T Consensus       178 e~l~VgD~~~Di~~A~~~G~~ti~v~  203 (225)
T d1zd3a1         178 EVVFLDDIGANLKPARDLGMVTILVQ  203 (225)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred             ceeEEecCHHHHHHHHHcCCEEEEEC
Confidence            99999999988877788899876665

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.49  E-value=6.1e-08  Score=82.17  Aligned_cols=120  Identities=13%  Similarity=0.112  Sum_probs=76.0

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc------------hhhHHHHHHHhcCCCc-eeEEEECC------------Cccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGL------------EGYARPLVDRIDGENL-FSLRLYRP------------STTS  206 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~------------~~yA~~vl~~Ldp~~~-f~~rl~r~------------~c~~  206 (276)
                      .+-||+.+.|+.|.+. |.++|.|+..            ....+.+.+.+...+. +...+++.            +|..
T Consensus        48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (209)
T d2o2xa1          48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM  127 (209)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred             EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence            4679999999999987 9999999843            2223344444545553 44444432            3444


Q ss_pred             cCCc--cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCCC------------CCChHHhHHHHHHHHhhhc
Q 023829          207 TEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ------------PHDNQVLTNVTLLKFLLSS  272 (276)
Q Consensus       207 ~k~~--~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~------------~~D~eL~~l~~~L~~La~~  272 (276)
                      .|++  .+.+.++.++.+++++++|-|+..-.......|+...-...|.            ..-.++.+++..++.|.+.
T Consensus       128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e~~dll~~v~~l~~~  207 (209)
T d2o2xa1         128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLGRD  207 (209)
T ss_dssp             STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHHTCCC
T ss_pred             ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhHHHHHHHHHHHHHHc
Confidence            4544  4667788889999999999999876555444454211111011            1234677888888877664

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.47  E-value=6e-09  Score=83.10  Aligned_cols=101  Identities=13%  Similarity=0.023  Sum_probs=83.2

Q ss_pred             EEEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-cCCCceeEEEECCCccccCCc--cccccccccCcCCCc
Q 023829          150 VTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (276)
Q Consensus       150 ~~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L-dp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~  225 (276)
                      .....+||+.+++..+... +.+++.|++....+...+..+ +...+|..+++.++....|+.  .|.+.++.+|.++++
T Consensus        81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~  160 (197)
T d2b0ca1          81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD  160 (197)
T ss_dssp             CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCe
Confidence            3467999999999999866 999999999988887777765 566789999988776666654  678888899999999


Q ss_pred             EEEEEcCcccccCCCCCeeeeCccC
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCIPFS  250 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~~f~  250 (276)
                      ||+|+|++..+......|+...-..
T Consensus       161 ~l~vgDs~~di~~A~~aG~~ti~v~  185 (197)
T d2b0ca1         161 TVFFDDNADNIEGANQLGITSILVK  185 (197)
T ss_dssp             EEEEESCHHHHHHHHTTTCEEEECC
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEEC
Confidence            9999999988877788888776553

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=9.7e-08  Score=77.68  Aligned_cols=98  Identities=13%  Similarity=0.152  Sum_probs=62.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc--------hhhHHH----HHHHhcCCCc-eeEEEEC-----CCccccCCc--
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGL--------EGYARP----LVDRIDGENL-FSLRLYR-----PSTTSTEYR--  210 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~--------~~yA~~----vl~~Ldp~~~-f~~rl~r-----~~c~~~k~~--  210 (276)
                      +.+-||+.+.|+.|.+. |.++|.|+.+        +.-...    +.+.+...+. +..++++     +.|...|+.  
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~  108 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVK  108 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSG
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccH
Confidence            35789999999999987 9999999854        111222    2333344442 4444444     345544544  


Q ss_pred             cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCcc
Q 023829          211 EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (276)
Q Consensus       211 ~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f  249 (276)
                      .+.+-++.+|.+++++++|-|+..-.......|+.---+
T Consensus       109 ~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i  147 (161)
T d2fpwa1         109 LVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRY  147 (161)
T ss_dssp             GGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEEC
T ss_pred             HHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEE
Confidence            677888889999999999999987766665556654444

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.41  E-value=7.5e-08  Score=80.06  Aligned_cols=95  Identities=14%  Similarity=0.148  Sum_probs=68.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEE-CCC-ccc------------cCCcccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLY-RPS-TTS------------TEYREHVKD  215 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~-r~~-c~~------------~k~~~~~Kd  215 (276)
                      +.++||+.++|+.|.+. +.++|.|++.+.+++.+++.++...+| ...+. .++ ...            .+.....+-
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  153 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV  153 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence            45899999999999877 999999999999999999998876654 22222 111 000            001122344


Q ss_pred             ccccCcCCCcEEEEEcCcccccCCCCCeeee
Q 023829          216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       216 L~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V  246 (276)
                      ++.++.+.++++.|-|+..-.......++.+
T Consensus       154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~  184 (226)
T d2feaa1         154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCF  184 (226)
T ss_dssp             HHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred             HHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence            6667889999999999999876665566643

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.4e-06  Score=73.08  Aligned_cols=100  Identities=17%  Similarity=0.247  Sum_probs=69.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEEEECC-C--c-cccCCc---------ccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLYRP-S--T-TSTEYR---------EHVKD  215 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~--~f~~rl~r~-~--c-~~~k~~---------~~~Kd  215 (276)
                      +.++||+.+++++|.+. +.++|-|++...+++++++.++...  .|...+--+ +  . +.....         ..++-
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~  160 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  160 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHH
Confidence            55889999999999987 9999999999999999999997653  343332111 1  0 000000         11121


Q ss_pred             ccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCCCC
Q 023829          216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQP  254 (276)
Q Consensus       216 L~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~  254 (276)
                      + +-+.++++++.|-|+..-.......|+.| .|. +++
T Consensus       161 ~-~~~~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~-~~~  196 (217)
T d1nnla_         161 L-KEKFHFKKIIMIGDGATDMEACPPADAFI-GFG-GNV  196 (217)
T ss_dssp             H-HHHHCCSCEEEEESSHHHHTTTTTSSEEE-EEC-SSC
T ss_pred             H-HhccCccccEEEEeCHhhHHHHHhCCceE-EEC-CCH
Confidence            1 11357889999999999998888888875 564 344

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=1.4e-05  Score=64.97  Aligned_cols=92  Identities=11%  Similarity=0.100  Sum_probs=60.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCch--------hhHHHHHHHh----cCC-CceeEEEECC------------Cccc
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGLE--------GYARPLVDRI----DGE-NLFSLRLYRP------------STTS  206 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~--------~yA~~vl~~L----dp~-~~f~~rl~r~------------~c~~  206 (276)
                      ++-||+.+.|+.|++. |.++|.|+...        .....+...+    ... ..+....++.            .|..
T Consensus        27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~  106 (182)
T d2gmwa1          27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC  106 (182)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred             eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccccc
Confidence            3569999999999987 99999999753        2222222222    112 2344444443            3554


Q ss_pred             cCCc--cccccccccCcCCCcEEEEEcCcccccCCCCCee
Q 023829          207 TEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGI  244 (276)
Q Consensus       207 ~k~~--~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI  244 (276)
                      .|+.  ...+.++.++.+++++++|=|+..-.......|+
T Consensus       107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~  146 (182)
T d2gmwa1         107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANV  146 (182)
T ss_dssp             STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTC
T ss_pred             cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCC
Confidence            4554  5677788889999999999999876654433344

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.78  E-value=1e-05  Score=64.75  Aligned_cols=96  Identities=15%  Similarity=0.106  Sum_probs=69.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc------------cccccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR------------EHVKDLSC  218 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~------------~~~KdL~~  218 (276)
                      ....+|+.++++.+... +.+++.|++...++....+......++...+..+........            ...+-+..
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  153 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHHHH
Confidence            44889999999999987 999999999999999999998888777666554443221100            11223344


Q ss_pred             cCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      ++.+++++|.|-|+..-.......|+.|-
T Consensus       154 ~~~~~~~~i~iGDs~nDi~m~~~ag~~va  182 (210)
T d1j97a_         154 EGINLEDTVAVGDGANDISMFKKAGLKIA  182 (210)
T ss_dssp             HTCCGGGEEEEESSGGGHHHHHHCSEEEE
T ss_pred             hcccccceEEecCCcChHHHHHHCCCCEE
Confidence            57789999999999987655555566553

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.67  E-value=6.1e-05  Score=58.20  Aligned_cols=74  Identities=22%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~-f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      ..|++-++|+.|.+. +.|+|||+-...+-+...+.|..++. |..+.....     .+  .+.=+...+.+.--++|||
T Consensus        22 Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~yd~i~~~~~-----~~--~~~~~~~~~Kp~ad~yIDD   94 (122)
T d2obba1          22 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDYP-----EE--ERDHQGFSRKLKADLFIDD   94 (122)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSST-----TC-----CCSCCSSCCCSEEECT
T ss_pred             ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCCceehhccCc-----cC--ccccceecCCccccEEEeC
Confidence            579999999999877 99999999999999999999988874 444322111     01  1111222334444589999


Q ss_pred             Ccc
Q 023829          232 NPF  234 (276)
Q Consensus       232 sp~  234 (276)
                      ...
T Consensus        95 Kai   97 (122)
T d2obba1          95 RNV   97 (122)
T ss_dssp             TST
T ss_pred             Ccc
Confidence            764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=4.1e-06  Score=68.81  Aligned_cols=96  Identities=6%  Similarity=-0.019  Sum_probs=77.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEE-EECCCccccCCc--cccccccccCcCCCcEE
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLR-LYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~r-l~r~~c~~~k~~--~~~KdL~~L~rd~~~~I  227 (276)
                      ...+||+.++|+.|.+. +.++|.|++.....+.+++.+....+|... ...+.....|+.  .|.+.++++|.++++|+
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~l  205 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL  205 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcEE
Confidence            45789999999999877 999999999999999999988877665432 223444444554  68899999999999999


Q ss_pred             EEEcCcccccCCCCCeeeeC
Q 023829          228 IVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       228 iVDDsp~~~~~~p~NgI~V~  247 (276)
                      +|+|+...+.....+|+...
T Consensus       206 ~vgD~~~dv~aA~~aG~~ti  225 (253)
T d1zs9a1         206 FLTDVTREASAAEEADVHVA  225 (253)
T ss_dssp             EEESCHHHHHHHHHTTCEEE
T ss_pred             EEeCCHHHHHHHHHcCCEEE
Confidence            99999988777777777543

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00021  Score=57.95  Aligned_cols=54  Identities=13%  Similarity=0.157  Sum_probs=36.4

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023829           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI  172 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelv  172 (276)
                      ++++++|||||||+++.+  .                                        .-|...+.|+++.+...++
T Consensus         2 ~~kl~~fDlDGTLl~~~~--~----------------------------------------i~~~~~~al~~l~~~g~~~   39 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQ--K----------------------------------------ITKEMDDFLQKLRQKIKIG   39 (243)
T ss_dssp             CSEEEEEESBTTTBCTTS--C----------------------------------------CCHHHHHHHHHHTTTSEEE
T ss_pred             CCEEEEEcCcCCeeCCCC--c----------------------------------------CCHHHHHHHHHHHcCCCEE
Confidence            678999999999997521  1                                        2345567777777776677


Q ss_pred             EEccCchhhHHHHHHH
Q 023829          173 LFTAGLEGYARPLVDR  188 (276)
Q Consensus       173 I~Ts~~~~yA~~vl~~  188 (276)
                      +.|++....+...+..
T Consensus        40 i~Tgr~~~~~~~~~~~   55 (243)
T d2amya1          40 VVGGSDFEKVQEQLGN   55 (243)
T ss_dssp             EECSSCHHHHHHHHCT
T ss_pred             EEcCCChHHhHHHHhh
Confidence            7777665555544433

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00081  Score=55.70  Aligned_cols=80  Identities=10%  Similarity=0.131  Sum_probs=50.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc--------hhhH----HHHHHHhcCCCceeEEEECCCccccCCc--cccccc
Q 023829          152 VFERPGLREFLKQLSEF-ADLILFTAGL--------EGYA----RPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDL  216 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~--------~~yA----~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL  216 (276)
                      ..+.|++.+.|+.|.+. |.++|+|+..        .+..    +.+++.++..  +...+...+|...|+.  .+.+-+
T Consensus        49 ~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~  126 (195)
T d1yj5a1          49 RILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQ  126 (195)
T ss_dssp             EESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSSSTTSTHHHHHHH
T ss_pred             eeccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccccCCCccHHHHHHH
Confidence            44689999999999977 9999999953        2223    2333444322  2333344566666665  232333


Q ss_pred             cc----cCcCCCcEEEEEcCc
Q 023829          217 SC----LSKDLCRTLIVDNNP  233 (276)
Q Consensus       217 ~~----L~rd~~~~IiVDDsp  233 (276)
                      +.    .+.|++++++|=|..
T Consensus       127 ~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1         127 EQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             HTSSSSCCCCGGGCEEECSCC
T ss_pred             HHhcccccCCcCceEEEeCcc
Confidence            33    347889999998864

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.00  E-value=0.00043  Score=53.49  Aligned_cols=48  Identities=15%  Similarity=0.205  Sum_probs=37.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc------------hhhHHHHHHHhcCCCc-eeEEEE
Q 023829          153 FERPGLREFLKQLSEF-ADLILFTAGL------------EGYARPLVDRIDGENL-FSLRLY  200 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~------------~~yA~~vl~~Ldp~~~-f~~rl~  200 (276)
                      ...|++-+++..+.+. +.|+|||+-.            ..+.+...+.|...+. +...++
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~Yd~Li~   85 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEILV   85 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCCSEEEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCCceEEEE
Confidence            4689999999999876 9999999983            4566777888887773 455544

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=96.93  E-value=0.00051  Score=57.67  Aligned_cols=33  Identities=30%  Similarity=0.446  Sum_probs=24.1

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR  188 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~  188 (276)
                      |++.+|++.+.+. +++++.|++.....+.+.+.
T Consensus        22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~   55 (250)
T d2c4na1          22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR   55 (250)
T ss_dssp             TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHH
Confidence            6788899988877 88888887665555555444

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.0013  Score=54.87  Aligned_cols=38  Identities=11%  Similarity=0.158  Sum_probs=31.9

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      |...+.|++|.+. ..++|.|..+...+..+++.+....
T Consensus        24 ~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~   62 (271)
T d1rkqa_          24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   62 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcC
Confidence            5567888999877 9999999999999999999886543

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.0004  Score=61.03  Aligned_cols=96  Identities=11%  Similarity=0.165  Sum_probs=62.6

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC----ceeEEEECCC----------ccccCCc--ccc
Q 023829          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN----LFSLRLYRPS----------TTSTEYR--EHV  213 (276)
Q Consensus       151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~----~f~~rl~r~~----------c~~~k~~--~~~  213 (276)
                      .+.+|||+.+|+++|.++ +.++|+|+|...+++++++.+....    .++..+.-++          |.....+  ...
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            367999999999999987 9999999999999999999986532    3443332111          1111000  001


Q ss_pred             cccc--ccCcCCCcEEEEEcCcccccC-----CCCCeeee
Q 023829          214 KDLS--CLSKDLCRTLIVDNNPFSFLL-----QPLNGIPC  246 (276)
Q Consensus       214 KdL~--~L~rd~~~~IiVDDsp~~~~~-----~p~NgI~V  246 (276)
                      +...  ....+.+++|+|=|+..-...     +.+|++.|
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~i  252 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI  252 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEE
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeee
Confidence            1111  223467889999999886543     34565554

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0025  Score=51.08  Aligned_cols=38  Identities=16%  Similarity=0.127  Sum_probs=30.8

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      |...+.|+.+.+. ..+++.|.-....+..+++.+...+
T Consensus        24 ~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~   62 (232)
T d1xvia_          24 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   62 (232)
T ss_dssp             CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence            4556788888877 8899999988898999999887653

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.55  E-value=0.0026  Score=51.01  Aligned_cols=38  Identities=13%  Similarity=0.135  Sum_probs=28.1

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      |...+.|+++.+. ..+++.|.-....++.++..+....
T Consensus        22 ~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~   60 (230)
T d1wr8a_          22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   60 (230)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc
Confidence            4456677777766 7888888888888888888776654

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.0014  Score=54.84  Aligned_cols=34  Identities=32%  Similarity=0.468  Sum_probs=24.0

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L  189 (276)
                      |++.++|+.|.+. ..+++.|++.......+.+.+
T Consensus        26 ~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~   60 (261)
T d1vjra_          26 PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL   60 (261)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence            7788888888876 788888876655555555544

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.32  E-value=0.003  Score=52.78  Aligned_cols=14  Identities=36%  Similarity=0.544  Sum_probs=12.4

Q ss_pred             eEEEEeCCCccccc
Q 023829           95 LTVVLDLDETLVCA  108 (276)
Q Consensus        95 ~tLVLDLDgTLv~s  108 (276)
                      |.|++||||||++.
T Consensus         2 Kli~~DlDGTLl~~   15 (285)
T d1nrwa_           2 KLIAIDLDGTLLNS   15 (285)
T ss_dssp             CEEEEECCCCCSCT
T ss_pred             eEEEEECCccccCC
Confidence            57999999999975

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.29  E-value=0.0018  Score=54.01  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=21.9

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR  188 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~  188 (276)
                      |++.++|+.|.+. ..+++.|+.+....+.+.+.
T Consensus        21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~   54 (253)
T d1yv9a1          21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR   54 (253)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            6777788888766 77777776655545554443

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=96.28  E-value=0.0019  Score=54.15  Aligned_cols=14  Identities=29%  Similarity=0.354  Sum_probs=12.4

Q ss_pred             eEEEEeCCCccccc
Q 023829           95 LTVVLDLDETLVCA  108 (276)
Q Consensus        95 ~tLVLDLDgTLv~s  108 (276)
                      +.++|||||||++.
T Consensus         3 k~vlFDlDGTL~~~   16 (253)
T d1wvia_           3 KGYLIDLDGTIYKG   16 (253)
T ss_dssp             CEEEEECBTTTEET
T ss_pred             CEEEEcCcCceEEC
Confidence            57999999999974

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.12  E-value=0.0051  Score=49.70  Aligned_cols=34  Identities=9%  Similarity=0.212  Sum_probs=26.5

Q ss_pred             HHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          160 EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       160 eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      +-|+.+.+. ..+++.|.-+...+..+++.++...
T Consensus        24 ~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~   58 (243)
T d1wzca1          24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (243)
T ss_dssp             HHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence            456666666 8888888888888888888887653

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.07  E-value=0.0011  Score=52.39  Aligned_cols=96  Identities=11%  Similarity=0.151  Sum_probs=68.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEE-CCCcccc-----CCccccccccccCcCCCc
Q 023829          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLY-RPSTTST-----EYREHVKDLSCLSKDLCR  225 (276)
Q Consensus       152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~-r~~c~~~-----k~~~~~KdL~~L~rd~~~  225 (276)
                      +...|+...+...+.+.+.+++.|.+.....+.+...+.....+...+. ...+...     +.....+.+..++.+.++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e  147 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  147 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence            5589999999999988899999999999999999999887766554433 2221111     111223445566889999


Q ss_pred             EEEEEcCcccccCCCCCeeeeC
Q 023829          226 TLIVDNNPFSFLLQPLNGIPCI  247 (276)
Q Consensus       226 ~IiVDDsp~~~~~~p~NgI~V~  247 (276)
                      |+.|=|+..-...-...|+.|-
T Consensus       148 viaiGDg~NDi~Ml~~Ag~gIA  169 (206)
T d1rkua_         148 VIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             EEEEECSSTTHHHHHHSSEEEE
T ss_pred             eEEecCCccCHHHHHhCCccEE
Confidence            9999999887766556666654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0041  Score=49.70  Aligned_cols=27  Identities=11%  Similarity=0.055  Sum_probs=16.3

Q ss_pred             HHHHHHHhhhcceEEEEccCchhhHHH
Q 023829          158 LREFLKQLSEFADLILFTAGLEGYARP  184 (276)
Q Consensus       158 l~eFL~~l~~~yelvI~Ts~~~~yA~~  184 (276)
                      ..+-|+++.+.-.+++.|++....+..
T Consensus        23 ~~~~i~~l~~~g~~~i~tgrr~~~~~~   49 (244)
T d2fuea1          23 VAAFLQKLRSRVQIGVVGGSDYCKIAE   49 (244)
T ss_dssp             HHHHHHHHTTTSEEEEECSSCHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEecCChhhhhh
Confidence            455666676665566666665554443

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.95  E-value=0.0037  Score=50.88  Aligned_cols=38  Identities=8%  Similarity=-0.032  Sum_probs=24.9

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      |++.+-|+.+.+. ..+++.|.-...+++.+.+.+....
T Consensus        23 ~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~   61 (225)
T d1l6ra_          23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   61 (225)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc
Confidence            4555666666665 6677777766667777777665543

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.72  E-value=0.0083  Score=49.97  Aligned_cols=15  Identities=40%  Similarity=0.461  Sum_probs=12.7

Q ss_pred             eEEEEeCCCcccccc
Q 023829           95 LTVVLDLDETLVCAY  109 (276)
Q Consensus        95 ~tLVLDLDgTLv~s~  109 (276)
                      +++++||||||+++.
T Consensus         3 Kli~~DlDGTL~~~~   17 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDN   17 (267)
T ss_dssp             CEEEEECCCCCSCTT
T ss_pred             EEEEEeCCccccCCc
Confidence            578999999999753

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=95.52  E-value=0.0033  Score=52.22  Aligned_cols=37  Identities=8%  Similarity=0.109  Sum_probs=21.3

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (276)
Q Consensus       156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~  192 (276)
                      |...+.|+.+.+. ..+++.|.-....+..+++.+...
T Consensus        23 ~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_          23 PRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDE   60 (269)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence            3455556666655 666666665555555555554433

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=95.50  E-value=0.0081  Score=49.62  Aligned_cols=37  Identities=8%  Similarity=-0.166  Sum_probs=28.4

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcC
Q 023829          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG  191 (276)
Q Consensus       155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp  191 (276)
                      -|...+.|+.+.+. ..++|.|.-+...+..+++.+..
T Consensus        30 ~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~   67 (283)
T d2b30a1          30 PSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL   67 (283)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            34556777777765 88999999888888888887643

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.0036  Score=52.29  Aligned_cols=86  Identities=5%  Similarity=0.018  Sum_probs=51.1

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc----C-CCceeEEEECCCccccC-CccccccccccCcCCCcE
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID----G-ENLFSLRLYRPSTTSTE-YREHVKDLSCLSKDLCRT  226 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld----p-~~~f~~rl~r~~c~~~k-~~~~~KdL~~L~rd~~~~  226 (276)
                      .-||+.+|++++.++ ++|+.-|+-.+...+...+.|.    - ..--..++++..-.... .+.++|+.       +=+
T Consensus        87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y-------~I~  159 (209)
T d2b82a1          87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDK-------NIR  159 (209)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHT-------TEE
T ss_pred             cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHc-------CeE
Confidence            568999999999988 9999999977666555555442    2 11223444443321111 11344442       226


Q ss_pred             EEEEcCcccccCCCCCeeee
Q 023829          227 LIVDNNPFSFLLQPLNGIPC  246 (276)
Q Consensus       227 IiVDDsp~~~~~~p~NgI~V  246 (276)
                      +++.|+-.-+....+.|+..
T Consensus       160 l~~GD~l~Df~aA~eagi~~  179 (209)
T d2b82a1         160 IFYGDSDNDITAARDVGARG  179 (209)
T ss_dssp             EEEESSHHHHHHHHHTTCEE
T ss_pred             EEecCCHHHHhHHHHcCCCc
Confidence            77888877775555555543

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0019  Score=52.18  Aligned_cols=29  Identities=21%  Similarity=0.359  Sum_probs=23.7

Q ss_pred             eeCccHHHHHHHhhh--cceEEEEccCchhh
Q 023829          153 FERPGLREFLKQLSE--FADLILFTAGLEGY  181 (276)
Q Consensus       153 ~~RPgl~eFL~~l~~--~yelvI~Ts~~~~y  181 (276)
                      ..-||+.+.|+.|++  .++++|-|+....+
T Consensus        74 ~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~  104 (195)
T d1q92a_          74 EPLPGAVEAVKEMASLQNTDVFICTSPIKMF  104 (195)
T ss_dssp             CBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred             CcccCHHHHHHHHhhccCccceEEccccccC
Confidence            466999999999986  37888999987654

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.08  E-value=0.0085  Score=49.02  Aligned_cols=16  Identities=38%  Similarity=0.536  Sum_probs=13.5

Q ss_pred             CceEEEEeCCCccccc
Q 023829           93 QKLTVVLDLDETLVCA  108 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~s  108 (276)
                      +|.++++||||||++.
T Consensus         2 ~~~li~~DlDGTL~~~   17 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGD   17 (244)
T ss_dssp             CSEEEEECTBTTTBSC
T ss_pred             CceEEEEECcccCCCC
Confidence            4678889999999974

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.46  E-value=0.023  Score=45.01  Aligned_cols=12  Identities=50%  Similarity=0.592  Sum_probs=10.7

Q ss_pred             EEEEeCCCcccc
Q 023829           96 TVVLDLDETLVC  107 (276)
Q Consensus        96 tLVLDLDgTLv~  107 (276)
                      +|+|||||||+.
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            588999999995

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=92.99  E-value=0.025  Score=46.71  Aligned_cols=14  Identities=36%  Similarity=0.513  Sum_probs=12.2

Q ss_pred             eEEEEeCCCccccc
Q 023829           95 LTVVLDLDETLVCA  108 (276)
Q Consensus        95 ~tLVLDLDgTLv~s  108 (276)
                      |.|++||||||++.
T Consensus         2 k~if~DlDGTL~~~   15 (260)
T d2rbka1           2 KALFFDIDGTLVSF   15 (260)
T ss_dssp             CEEEECSBTTTBCT
T ss_pred             eEEEEECCCCCcCC
Confidence            67899999999963

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.88  E-value=0.045  Score=43.00  Aligned_cols=82  Identities=11%  Similarity=0.130  Sum_probs=58.4

Q ss_pred             hhhcceEEEEccCchhhHHHHHHH-----------hcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEEc
Q 023829          165 LSEFADLILFTAGLEGYARPLVDR-----------IDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVDN  231 (276)
Q Consensus       165 l~~~yelvI~Ts~~~~yA~~vl~~-----------Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVDD  231 (276)
                      +.....+.+.|+........+...           ++...+|..+++.+. ...|+.  .|..-++++|.++++|++|+|
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~-~~~KP~p~~f~~~~~~lg~~p~e~l~VgD  184 (225)
T d2g80a1         106 IKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINT-SGKKTETQSYANILRDIGAKASEVLFLSD  184 (225)
T ss_dssp             HHHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHH-HCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             HhhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccc-cCCCCChhHhHHHHHhcccCchhceeecC
Confidence            345678899998877665555432           334457888766543 334544  688999999999999999999


Q ss_pred             CcccccCCCCCeeeeC
Q 023829          232 NPFSFLLQPLNGIPCI  247 (276)
Q Consensus       232 sp~~~~~~p~NgI~V~  247 (276)
                      ++.........|+...
T Consensus       185 ~~~Dv~~A~~aG~~ti  200 (225)
T d2g80a1         185 NPLELDAAAGVGIATG  200 (225)
T ss_dssp             CHHHHHHHHTTTCEEE
T ss_pred             CHHHHHHHHHcCCEEE
Confidence            9987777777776543

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.84  E-value=0.65  Score=35.04  Aligned_cols=40  Identities=8%  Similarity=0.074  Sum_probs=37.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~  193 (276)
                      +||++.+.++.|.+. .+++|-|-...+.|+.+.+.++...
T Consensus        22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~   62 (135)
T d2b8ea1          22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL   62 (135)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE
T ss_pred             CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh
Confidence            799999999999988 9999999999999999999998653

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=88.34  E-value=0.16  Score=44.85  Aligned_cols=90  Identities=10%  Similarity=-0.040  Sum_probs=65.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeE--EEECCCc-----------cccCCc--ccccc--
Q 023829          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSL--RLYRPST-----------TSTEYR--EHVKD--  215 (276)
Q Consensus       154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~--rl~r~~c-----------~~~k~~--~~~Kd--  215 (276)
                      .|||+.++|+.|.+. +.++|.|...+..|+.+++.++...+|..  +...++.           ...|+.  .+.+.  
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~  295 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY  295 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHH
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHH
Confidence            456999999999987 99999999999999999999998887742  3332221           112221  12222  


Q ss_pred             ------------ccccCcCCCcEEEEEcCcccccCCCCCe
Q 023829          216 ------------LSCLSKDLCRTLIVDNNPFSFLLQPLNG  243 (276)
Q Consensus       216 ------------L~~L~rd~~~~IiVDDsp~~~~~~p~Ng  243 (276)
                                  .+.++.+.+.|++|-|+..-....+..|
T Consensus       296 ~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag  335 (380)
T d1qyia_         296 GNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG  335 (380)
T ss_dssp             CCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHT
T ss_pred             HcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCC
Confidence                        2345678899999999998777666666

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.11  E-value=0.13  Score=40.16  Aligned_cols=15  Identities=27%  Similarity=0.286  Sum_probs=12.8

Q ss_pred             ceEEEEeCCCccccc
Q 023829           94 KLTVVLDLDETLVCA  108 (276)
Q Consensus        94 k~tLVLDLDgTLv~s  108 (276)
                      -.+++||+||||+++
T Consensus         3 ~~~~lfD~dGTl~d~   17 (225)
T d2g80a1           3 YSTYLLDIEGTVCPI   17 (225)
T ss_dssp             CSEEEECCBTTTBCT
T ss_pred             CCEEEEcCCCCCccc
Confidence            368999999999974

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=83.80  E-value=0.19  Score=39.59  Aligned_cols=15  Identities=20%  Similarity=0.337  Sum_probs=13.1

Q ss_pred             CceEEEEeCCCcccc
Q 023829           93 QKLTVVLDLDETLVC  107 (276)
Q Consensus        93 ~k~tLVLDLDgTLv~  107 (276)
                      .-++|+||+||||++
T Consensus         6 ~i~~vlfD~dGTl~~   20 (253)
T d1zs9a1           6 EVTVILLDIEGTTTP   20 (253)
T ss_dssp             TCCEEEECCBTTTBC
T ss_pred             CCCEEEEeCcCCCcc
Confidence            468999999999985