Citrus Sinensis ID: 023836

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MAKTTIINFQFLLPFVIFTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccHHHHcccccEEEEEcccccccccccccccccccEEEEEEEEcccccEEEEEEEEEcccccccccccccccccccccccccccccccccEEEEEEEEEcccccccHHHHHcccccccccEEEEEEccccccccccccccccccccHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHccEEEEEcccccccccccEEEEEEcccccccccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEEEEccccccEEEEEEEEcccccccccccccccccccccccccccccHHHHcccEEEEEccccccccHHHHHHcccccccEEEEEEEccccccccHHHcccccccccHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHcccEEEEEEEEccccccccEEEEEEEcEEcccccccEEEEEEc
Coil and Loop (DISEMBL)
MAKTTIINFQFLLPFVIFTLLALTVaandeaypttttapdcslseellikpvrrevygggrifdithqvtvdlpsydteggrlgqflrlpvsmkngsfcnisemkftthtgthvdapghffdhyfdagfdadsldldvlngpgllvdvprdknltAEVLeslnipkgVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELlrnreiipveglkldhvpaglysihclplrmvgaegspvrcilik
Flexible Loop (DISEMBL)
MAKTTIINFQFLLPFVIFTLLALTVAANDEAYpttttapdcslseellIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAevleslnipkgvrrVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPlrmvgaegspvrcilik
Low Complexity Region (SEG)
MAKTTIINFQFLLPFVIFTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK
Disordered region (IsUnstruct)
****TIINFQFLLPFVIFTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILI*
Disordered Region (DISOPRED)
********FQFLLPFVIFTLLALTVAANDEAY************************YGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK
Disordered Region (DISEMBL)
MAKTTIINFQFLLPFVIFTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK
Disordered Region (DISPRO)
**KTTIINFQFLLPFVIFTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKTTIINFQFLLPFVIFTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
Q81CK1	209	Kynurenine formamidase OS	yes	no	0.626	0.827	0.353	3e-18
A9VHP8	209	Kynurenine formamidase OS	yes	no	0.626	0.827	0.353	3e-18
Q2N5X0	216	Kynurenine formamidase OS	yes	no	0.710	0.907	0.337	5e-18
Q736W4	209	Kynurenine formamidase OS	yes	no	0.615	0.813	0.362	1e-17
Q63AJ1	209	Kynurenine formamidase OS	yes	no	0.626	0.827	0.347	1e-17
A0REX1	209	Kynurenine formamidase OS	yes	no	0.626	0.827	0.347	2e-17
Q81PP9	209	Kynurenine formamidase OS	yes	no	0.626	0.827	0.347	2e-17
Q6HHX8	209	Kynurenine formamidase OS	yes	no	0.626	0.827	0.347	3e-17
A7GPY2	209	Kynurenine formamidase OS	yes	no	0.615	0.813	0.340	6e-17
A4IT60	209	Kynurenine formamidase OS	yes	no	0.623	0.822	0.331	1e-15

>sp|Q81CK1|KYNB_BACCR Kynurenine formamidase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=kynB PE=1 SV=1

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 11/184 (5%)

Query: 92  SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
           S +     N+ ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV   
Sbjct: 33  SKEESGSVNVGKLTMSIHTGTHIDAPFHFDN----DGKKVLDLDVQVYVGPARIIDVSNL 88

Query: 152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
           +++  + LES ++ +GV R+L RT +  +    ++F        AD A +L E   I+L+
Sbjct: 89  ESIGKKELESFHL-EGVERLLLRTSSHGKA---EEFPEVIPHLRADIASFLSEKG-IRLI 143

Query: 212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
           GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKHG-IHILENVVLDHVADGDYELIALPLALTDADGSPV 202

Query: 271 RCIL 274
           R ++
Sbjct: 203 RAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.
Bacillus cereus (strain ATCC 14579 / DSM 31) (taxid: 226900)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9

>sp|A9VHP8|KYNB_BACWK Kynurenine formamidase OS=Bacillus weihenstephanensis (strain KBAB4) GN=kynB PE=3 SV=1

 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 11/184 (5%)

Query: 92  SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
           S +N    N+ ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV   
Sbjct: 33  SKENSGSVNVGKLTMSIHTGTHIDAPFHFDN----DGKKVLDLDIQVYVGPARIIDVSNL 88

Query: 152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
           +++  + LE+ ++ +GV R+L RT +  +     +F        AD A +L E   I+L+
Sbjct: 89  ESIGKKELENFHL-EGVERLLLRTSSHGKA---NEFPDVIPHLRADIAAFLSEKG-IRLI 143

Query: 212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
           GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKHG-IHILENVVLDHVVDGDYELIALPLALTDADGSPV 202

Query: 271 RCIL 274
           R ++
Sbjct: 203 RAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q2N5X0|KYNB_ERYLH Kynurenine formamidase OS=Erythrobacter litoralis (strain HTCC2594) GN=kynB PE=3 SV=1

 Score = 91.7 bits (226), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 23/219 (10%)

Query: 61  RIFDITHQVTVDLPSY--DTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPG 118
           RI+DI+  +   LP +  DTE G    F R    M  GS  N+  M  +TH+GTH DAP 
Sbjct: 9   RIWDISQTLRPGLPIWPGDTEFG----FERT-WRMDEGSPVNVGRMTMSTHSGTHGDAPL 63

Query: 119 HFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIP--KGVRRVLFRTL 176
           H    Y + G DA S++LD   G  L+VD    + ++ E+ +  ++P  +   RVLFR  
Sbjct: 64  H----YAEDGLDAASMELDSYIGECLVVDA---RGVSGEI-DVADLPHIESADRVLFRQW 115

Query: 177 NTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDD-IISAHHELLRNR 235
           ++       ++ + ++   A+  +WL     +KL+G D  SV   +   +SAH  +L++ 
Sbjct: 116 DS---FPHDEWRSDWLPIAAETVEWLALQG-VKLIGTDAPSVDPQESKTMSAHKAVLKHD 171

Query: 236 EIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 274
             I +EGL LD VP G Y +  LPL++V  +    R IL
Sbjct: 172 MRI-LEGLVLDDVPEGRYELLALPLKIVDGDAGLCRAIL 209

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Erythrobacter litoralis (strain HTCC2594) (taxid: 314225)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q736W4|KYNB_BACC1 Kynurenine formamidase OS=Bacillus cereus (strain ATCC 10987) GN=kynB PE=3 SV=1

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 12/182 (6%)

Query: 94  KNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKN 153
           ++GS  N+ ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV   ++
Sbjct: 36  ESGS-VNVGKLTMSIHTGTHIDAPFHFDN----EGKKVIDLDIQVYVGPVRIIDVSNLES 90

Query: 154 LTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGV 213
           +  + LE+ N+ +GV R+L RT +  +     +F        AD A +L E   I+L+GV
Sbjct: 91  IGKKELENFNL-EGVERLLLRTSSHGK---VNEFPDVIPHLHADIAPFLSEKG-IRLIGV 145

Query: 214 DYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRC 272
           D  SV   DD  + AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPVR 
Sbjct: 146 DVPSVDPLDDKELEAHHQLFKHG-IHILENVVLDHVADGDYELIALPLALTDADGSPVRA 204

Query: 273 IL 274
           ++
Sbjct: 205 VI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus (strain ATCC 10987) (taxid: 222523)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q63AJ1|KYNB_BACCZ Kynurenine formamidase OS=Bacillus cereus (strain ZK / E33L) GN=kynB PE=3 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 11/184 (5%)

Query: 92  SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
           S +     N+ ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV   
Sbjct: 33  SKEESGSVNVGKLTMSIHTGTHIDAPFHFDN----EGKKVIDLDVQVYVGPARIIDVSNL 88

Query: 152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
           +++  + LE+ ++ +GV R+L RT +  +     +F        AD A +L E   I+L+
Sbjct: 89  ESIGKKELENFHL-EGVERLLLRTSSHGKA---NEFPDVIPHLRADIAPFLSEKG-IRLI 143

Query: 212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
           GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKHG-IHILENVVLDHVADGDYELIALPLALSDADGSPV 202

Query: 271 RCIL 274
           R ++
Sbjct: 203 RAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus (strain ZK / E33L) (taxid: 288681)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A0REX1|KYNB_BACAH Kynurenine formamidase OS=Bacillus thuringiensis (strain Al Hakam) GN=kynB PE=3 SV=1

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 11/184 (5%)

Query: 92  SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
           S +     N+ ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV   
Sbjct: 33  SKEESGSVNVGKLTMSIHTGTHIDAPFHFDN----EGKKVIDLDVQVYVGPARIIDVSNL 88

Query: 152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
           +++  + LE  ++ +GV R+L RT +  +     +F        AD A +L E   I+L+
Sbjct: 89  ESIGKKELEKFHL-EGVERLLLRTSSHGKA---NEFPDIIPHLRADIAPFLSEKG-IRLI 143

Query: 212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
           GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKHG-IHILENVVLDHVADGDYELIALPLALSDADGSPV 202

Query: 271 RCIL 274
           R ++
Sbjct: 203 RAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus thuringiensis (strain Al Hakam) (taxid: 412694)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q81PP9|KYNB_BACAN Kynurenine formamidase OS=Bacillus anthracis GN=kynB PE=3 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 11/184 (5%)

Query: 92  SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
           S +     N+ ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV   
Sbjct: 33  SKEESGSVNVGKLTMSIHTGTHIDAPFHFDN----DGKKVLDLDIQVYVGPTRIIDVSNL 88

Query: 152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
           +++  + LE  ++ +GV R+L RT +  +     +F        AD A +L E   I+L+
Sbjct: 89  ESIGKKELEKFHL-EGVERLLLRTSSHGKA---NEFPDIIPHLRADIAPFLSEKG-IRLI 143

Query: 212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
           GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKH-SIHILENVVLDHVADGDYELIALPLALSDADGSPV 202

Query: 271 RCIL 274
           R ++
Sbjct: 203 RAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus anthracis (taxid: 1392)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|Q6HHX8|KYNB_BACHK Kynurenine formamidase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=kynB PE=3 SV=1

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 11/184 (5%)

Query: 92  SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
           S +     N+ ++  + HTGTH+DAP HF ++    G     LD+ V  GP  ++DV   
Sbjct: 33  SKEESGSVNVGKLTMSIHTGTHIDAPFHFDNN----GKKVLDLDIQVYVGPTRIIDVSNL 88

Query: 152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
           +++  + LE  ++ +GV R+L RT +  +     +F        AD A +L E   I+L+
Sbjct: 89  ESIGKKELEKFHL-EGVERLLLRTSSHGKA---NEFPDIIPHLRADIAPFLSEKG-IRLI 143

Query: 212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
           GVD  SV   DD  ++AHH+L ++  I  +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKHG-IHILENVVLDHVADGDYELIALPLALSDADGSPV 202

Query: 271 RCIL 274
           R ++
Sbjct: 203 RAVI 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus thuringiensis subsp. konkukian (strain 97-27) (taxid: 281309)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A7GPY2|KYNB_BACCN Kynurenine formamidase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=kynB PE=3 SV=1

 Score = 88.2 bits (217), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 12/182 (6%)

Query: 94  KNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKN 153
           ++GS  NI ++  + HTGTH+DAP HF +     G     LD+ V  GP  ++DV    +
Sbjct: 36  QSGS-VNIGKVTMSIHTGTHIDAPFHFDND----GKKVIDLDIHVYVGPARIIDVSSMDS 90

Query: 154 LTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGV 213
           +  + L+  N+ +GV R+L RT +      F       + F+       +    ++L+GV
Sbjct: 91  IGVKELQQFNL-EGVERLLLRTSSHGNAQKFPDI----IPFLCAEIAPFLSKKGVRLIGV 145

Query: 214 DYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRC 272
           D  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR 
Sbjct: 146 DVPSVDPLDDKELAAHHQLFQHGIHI-LENVVLDHVQDGDYELIALPLALTEADGSPVRA 204

Query: 273 IL 274
           I+
Sbjct: 205 II 206

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Bacillus cereus subsp. cytotoxis (strain NVH 391-98) (taxid: 315749)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

>sp|A4IT60|KYNB_GEOTN Kynurenine formamidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=kynB PE=3 SV=1

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 12/184 (6%)

Query: 94  KNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKN 153
           ++GS  N+ ++  +THTGTH+DAP HF +     G     LDL++  GP  ++ +   K 
Sbjct: 35  ESGS-VNVGQITMSTHTGTHIDAPFHFDN----EGKRVIDLDLNIYIGPARVIHLSNPKK 89

Query: 154 LTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGV 213
           +  + L+++++  GV R+L  T     +  F +     + ++       ++   ++L+G+
Sbjct: 90  IGIDELQTIDL-HGVTRLLIYTGAWTNRTTFPET----IPYIDPPLAPYLKKYGVRLIGI 144

Query: 214 DYLSVAAF-DDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRC 272
           D  SV       + AHHEL R    I +EGL LDHV  G Y +  LPL +V A+GSPVR 
Sbjct: 145 DLPSVDPLTSKQLPAHHELHRCGIHI-LEGLVLDHVSPGDYELAALPLPLVNADGSPVRA 203

Query: 273 ILIK 276
            L K
Sbjct: 204 ALRK 207

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine.

Geobacillus thermodenitrificans (strain NG80-2) (taxid: 420246)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
118488222	269	unknown [Populus trichocarpa]	0.913	0.936	0.699	6e-99
147838051	246	hypothetical protein VITISV_019335 [Viti	0.876	0.983	0.721	8e-99
449438375	272	PREDICTED: kynurenine formamidase-like [	0.884	0.897	0.744	3e-98
224060528	270	predicted protein [Populus trichocarpa]	0.956	0.977	0.660	8e-98
255555311	274	conserved hypothetical protein [Ricinus	0.884	0.890	0.697	5e-96
297802428	272	cyclase family protein [Arabidopsis lyra	0.894	0.908	0.699	2e-95
359475423	270	PREDICTED: LOW QUALITY PROTEIN: kynureni	0.876	0.896	0.701	7e-95
297852218	271	cyclase family protein [Arabidopsis lyra	0.967	0.985	0.627	9e-95
18418598	272	Cyclase family protein [Arabidopsis thal	0.894	0.908	0.691	1e-94
356575656	255	PREDICTED: kynurenine formamidase-like [	0.815	0.882	0.731	5e-94

>gi|118488222|gb|ABK95930.1| unknown [Populus trichocarpa]

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 179/256 (69%), Positives = 212/256 (82%), Gaps = 4/256 (1%)

Query: 24  TVAANDEAYPTTTTAPDCSL--SEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGG 81
           T AA+  AYPT   + D S   S++  + P+RREVYG GRIFDITH+ T D+PS  +E G
Sbjct: 15  TTAASSGAYPTIPGSIDTSFPASQDSKLIPIRREVYGDGRIFDITHRYTSDMPSMGSENG 74

Query: 82  RLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNG 141
            LGQFLRLP SMKNGSF NISEMK  THTGTHVDAPGH++DHYFDAGFD D+LDL+VLNG
Sbjct: 75  -LGQFLRLPESMKNGSFANISEMKLITHTGTHVDAPGHYYDHYFDAGFDVDTLDLEVLNG 133

Query: 142 PGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFK-KFDTSYVGFMADGAK 200
           PGLL+DVPR  N+TAEV++SL+IPKG RRVLFRT NTDR+LMFK + DTS+VGF  DGAK
Sbjct: 134 PGLLIDVPRGTNITAEVMKSLHIPKGARRVLFRTENTDRRLMFKNQIDTSFVGFTTDGAK 193

Query: 201 WLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPL 260
           WLV+NTDIKLVG+DYL+VAA+ D++ AH  LL +REII VEGLKLD +  G+YSIHCLP+
Sbjct: 194 WLVDNTDIKLVGIDYLAVAAWSDLVPAHLVLLESREIIIVEGLKLDDIQPGVYSIHCLPI 253

Query: 261 RMVGAEGSPVRCILIK 276
           R++GAEGSP RCILIK
Sbjct: 254 RLLGAEGSPTRCILIK 269

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838051|emb|CAN60920.1| hypothetical protein VITISV_019335 [Vitis vinifera]

 Score =  365 bits (938), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 179/248 (72%), Positives = 209/248 (84%), Gaps = 6/248 (2%)

Query: 30  EAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRL 89
           +AYP+      C +  +LL  PVR+EVY GGRIFDI+H+ T D+PS+D++ G +GQFL L
Sbjct: 3   KAYPSGYDTASCDV--DLL--PVRQEVYDGGRIFDISHRYTPDMPSFDSDEG-IGQFLWL 57

Query: 90  PVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVP 149
           P SMKNGS  N SEMK  THTGTHVDAPGH FDHYFDAGFD D+LDL+VLNGP LLVDVP
Sbjct: 58  PKSMKNGSIANNSEMKMQTHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGPALLVDVP 117

Query: 150 RDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMF-KKFDTSYVGFMADGAKWLVENTDI 208
           R+KN+TAEV+ESLNIPKGVRRVLFRTLNTDR+LMF KKFDTSYVGF  DGAKWLVENT+I
Sbjct: 118 RNKNITAEVMESLNIPKGVRRVLFRTLNTDRRLMFTKKFDTSYVGFTQDGAKWLVENTNI 177

Query: 209 KLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGS 268
           KLVG+DYLSVAA+ D++SAH+  L+ RE I VEGLKLD +  G+YS+HCLPLR+ GAEGS
Sbjct: 178 KLVGIDYLSVAAYSDLLSAHYAFLKGRETILVEGLKLDDIKPGIYSVHCLPLRLFGAEGS 237

Query: 269 PVRCILIK 276
           P+RCILIK
Sbjct: 238 PIRCILIK 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438375|ref|XP_004136964.1| PREDICTED: kynurenine formamidase-like [Cucumis sativus]

 Score =  363 bits (933), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/250 (74%), Positives = 209/250 (83%), Gaps = 6/250 (2%)

Query: 31  AYPTTT-TAP-DCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLR 88
           AYP+   T P DCSLS+  L  P+RREVY  GRI DI+H+ T D+P+++++ G LGQFL 
Sbjct: 25  AYPSVVDTGPTDCSLSDGDLT-PIRREVYDNGRIIDISHRFTTDMPAWESDQG-LGQFLW 82

Query: 89  LPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDV 148
           LP SMKNGS  N SEMK   HTGTHVDAPGH FDHYFDAGFD D+LDL+VLNGPGLLVDV
Sbjct: 83  LPKSMKNGSLANNSEMKLPAHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGPGLLVDV 142

Query: 149 PRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-FDTSYVGFMADGAKWLVENTD 207
           PRDKN+TAEV++SLNIPKGVRRVLFRTLNTDR LM+KK FDTSYVGFM DGAKWLVENTD
Sbjct: 143 PRDKNITAEVMKSLNIPKGVRRVLFRTLNTDRGLMWKKEFDTSYVGFMKDGAKWLVENTD 202

Query: 208 IKLVG-VDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAE 266
           IKLV  +DYLSVAAF D+I +H E LR RE I VEGLKLD V  GLYSIHCLPLR++GAE
Sbjct: 203 IKLVVLIDYLSVAAFKDLIPSHLEFLRGRETILVEGLKLDGVQPGLYSIHCLPLRLLGAE 262

Query: 267 GSPVRCILIK 276
           GSP+RCILIK
Sbjct: 263 GSPIRCILIK 272

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060528|ref|XP_002300230.1| predicted protein [Populus trichocarpa] gi|222847488|gb|EEE85035.1| predicted protein [Populus trichocarpa]

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 179/271 (66%), Positives = 217/271 (80%), Gaps = 7/271 (2%)

Query: 12  LLPFVIFTLLA--LTVAANDEAYPTT---TTAPDCSLSEELLIKPVRREVYGGGRIFDIT 66
           + PF++  L++   T  A++ A PT    TT    S S+E  + P+RREVYG GRIFDIT
Sbjct: 1   MTPFLLLLLISPFSTTTASNTACPTNIPDTTDTCISSSQENKLVPIRREVYGDGRIFDIT 60

Query: 67  HQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFD 126
           H+ T ++PS+ +E G LGQFL+ P  +KNGS  N+SEMK  THTGTHVDAPGHF+DHYFD
Sbjct: 61  HRYTANMPSFGSENG-LGQFLQFPEKIKNGSMVNVSEMKMVTHTGTHVDAPGHFYDHYFD 119

Query: 127 AGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFK- 185
           AGFD D+LDL+VLNGPGLL+D PR  N+TAEV++SLNIPKGVRRVLFRT NTDR+LMFK 
Sbjct: 120 AGFDVDTLDLEVLNGPGLLIDAPRGTNITAEVMKSLNIPKGVRRVLFRTDNTDRRLMFKN 179

Query: 186 KFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKL 245
           +FDTS+VGF  DGAKWLVENTDIKL+G+DYLSVAA+ D+ SAH  LL +REII VE LKL
Sbjct: 180 QFDTSFVGFTQDGAKWLVENTDIKLIGIDYLSVAAWSDLASAHLVLLESREIIIVESLKL 239

Query: 246 DHVPAGLYSIHCLPLRMVGAEGSPVRCILIK 276
           D +  G+YSIHCLPLR++GAE SP+RCILIK
Sbjct: 240 DDIQPGIYSIHCLPLRLLGAEASPIRCILIK 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555311|ref|XP_002518692.1| conserved hypothetical protein [Ricinus communis] gi|223542073|gb|EEF43617.1| conserved hypothetical protein [Ricinus communis]

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 173/248 (69%), Positives = 205/248 (82%), Gaps = 4/248 (1%)

Query: 32  YPTTTTAPDCSLS--EELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRL 89
           YPT   A D + +  +   + P+RREVYG G+I DI+H+ T ++PS+ ++ G LGQFL L
Sbjct: 28  YPTIPGAVDTTFTATQHDNLTPIRREVYGDGKILDISHKYTTNMPSWGSDEG-LGQFLWL 86

Query: 90  PVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVP 149
           P SMKNGS  N SEMK  THTGTHVDAPGH FDHYFDAGFD D+LDL+VLNG  LLVDVP
Sbjct: 87  PASMKNGSLANNSEMKLPTHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGHALLVDVP 146

Query: 150 RDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-FDTSYVGFMADGAKWLVENTDI 208
           RD N+TAEV++SL+IPKGVRRVLFRTLNTDRQLMFK+ FDTSYVGF  DGAKWLVENTDI
Sbjct: 147 RDSNITAEVMKSLHIPKGVRRVLFRTLNTDRQLMFKRQFDTSYVGFTKDGAKWLVENTDI 206

Query: 209 KLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGS 268
           K+VG+DYLSVAA+ D+I +H   L  REII VEGLKLD++ AG+YS+HCLPLR++GAEGS
Sbjct: 207 KMVGIDYLSVAAYSDLIPSHLVFLEGREIILVEGLKLDNIQAGIYSVHCLPLRLLGAEGS 266

Query: 269 PVRCILIK 276
           P+RCILIK
Sbjct: 267 PIRCILIK 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802428|ref|XP_002869098.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314934|gb|EFH45357.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 177/253 (69%), Positives = 212/253 (83%), Gaps = 6/253 (2%)

Query: 26  AANDEAYPTTT-TAP-DCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRL 83
           A+  +AYP+   TAP D   ++EL  KP+RREVYG G+I+DI+H+ T D+PS+D+  G L
Sbjct: 22  ASASDAYPSIPGTAPIDGGFTDEL--KPIRREVYGHGKIYDISHRYTPDMPSWDSSEG-L 78

Query: 84  GQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPG 143
           G+FL L  SMKNGS  N SEMK  THTGTHVD+PGH +D+Y+DAGFD DSLDL VLNG  
Sbjct: 79  GRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDNYYDAGFDVDSLDLQVLNGLA 138

Query: 144 LLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-FDTSYVGFMADGAKWL 202
           LLVDVP+DKN+TAEV++SL+IPKGV RVLFRTLNTDR+LMFKK FDTSYVGFM DGA+WL
Sbjct: 139 LLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMFKKEFDTSYVGFMKDGAQWL 198

Query: 203 VENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRM 262
           V+NTDIKLVG+DYLSVAA+DD+I +H   L++RE I VEGLKLD V AGLYS+HCLPLR+
Sbjct: 199 VDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGLKLDGVKAGLYSVHCLPLRL 258

Query: 263 VGAEGSPVRCILI 275
           VGAEGSP+RCILI
Sbjct: 259 VGAEGSPIRCILI 271

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475423|ref|XP_003631683.1| PREDICTED: LOW QUALITY PROTEIN: kynurenine formamidase-like [Vitis vinifera]

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 174/248 (70%), Positives = 203/248 (81%), Gaps = 6/248 (2%)

Query: 25  VAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLG 84
           V    EAYP+      C +  +LL  PVR+EVY GGRIFDI+H+ T D+PS+D++ G +G
Sbjct: 18  VTLASEAYPSGYDTASCDV--DLL--PVRQEVYDGGRIFDISHRYTPDMPSFDSDEG-IG 72

Query: 85  QFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGL 144
           QFL LP SMKNGS  N SEMK  THTGTHVDAPGH FDHYFDAGFD D+LDL+VLNGP L
Sbjct: 73  QFLWLPQSMKNGSIANNSEMKMQTHTGTHVDAPGHVFDHYFDAGFDVDTLDLEVLNGPAL 132

Query: 145 LVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMF-KKFDTSYVGFMADGAKWLV 203
           LVDVPR+KN+TAEV+ESLNIPKGVRRVLFRTLNTDR+LMF KKFDTSYVGF  DGAKWLV
Sbjct: 133 LVDVPRNKNITAEVMESLNIPKGVRRVLFRTLNTDRRLMFTKKFDTSYVGFTQDGAKWLV 192

Query: 204 ENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMV 263
           ENT+IKLVG+DYLSVAA+ D++SAH+  L+ RE I VEGLKLD +  G+YS+HCLPLR+ 
Sbjct: 193 ENTNIKLVGIDYLSVAAYSDLLSAHYAFLKGRETILVEGLKLDDIKPGIYSVHCLPLRLF 252

Query: 264 GAEGSPVR 271
           GAEGS  +
Sbjct: 253 GAEGSXYK 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852218|ref|XP_002893990.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata] gi|297339832|gb|EFH70249.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  352 bits (903), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 170/271 (62%), Positives = 217/271 (80%), Gaps = 4/271 (1%)

Query: 9   FQFLLPFVIFTLLALTVA-ANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGR-IFDIT 66
           +  L+  +I +  ++ +A A DEA+P+  T    +       KP+RREVYGG R IFDI+
Sbjct: 2   YHLLIIVIILSFSSIPIAFAVDEAFPSVPTTFRVATKHSDDQKPIRREVYGGERKIFDIS 61

Query: 67  HQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFD 126
           HQ T +LP +++  G LG+F+RL VSMKNGS  NIS+MK + H+GTHVDAPGHF +HY+D
Sbjct: 62  HQYTPELPVWESSEG-LGRFMRLAVSMKNGSVANISKMKLSVHSGTHVDAPGHFHEHYYD 120

Query: 127 AGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK 186
           +GFD+DSLDL +LNGP LLVDVPRDKN++AEV++SL+IPKG+RRVLF+TLNTDR+LMFKK
Sbjct: 121 SGFDSDSLDLQILNGPALLVDVPRDKNISAEVMKSLHIPKGIRRVLFKTLNTDRRLMFKK 180

Query: 187 -FDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKL 245
            FD+S+VGF+ DGAKWLVENTDIKLVG+DYLS AA+D+  + H  +L  R+IIPVE LKL
Sbjct: 181 EFDSSFVGFLIDGAKWLVENTDIKLVGLDYLSFAAYDEAPATHRFILERRDIIPVEALKL 240

Query: 246 DHVPAGLYSIHCLPLRMVGAEGSPVRCILIK 276
           D V  G+YS+HCLPLR+VGAEG+P RCILIK
Sbjct: 241 DDVEVGMYSLHCLPLRLVGAEGAPTRCILIK 271

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18418598|ref|NP_567979.1| Cyclase family protein [Arabidopsis thaliana] gi|13937204|gb|AAK50095.1|AF372956_1 AT4g35220/F23E12_220 [Arabidopsis thaliana] gi|18491127|gb|AAL69532.1| AT4g35220/F23E12_220 [Arabidopsis thaliana] gi|21537400|gb|AAM61741.1| unknown [Arabidopsis thaliana] gi|332661081|gb|AEE86481.1| Cyclase family protein [Arabidopsis thaliana]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 175/253 (69%), Positives = 209/253 (82%), Gaps = 6/253 (2%)

Query: 26  AANDEAYPTTT-TAP-DCSLSEELLIKPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRL 83
           A    AYP+   TAP D   ++EL  KP+RREVYG G+I+DI+H+ T ++PS+D+  G +
Sbjct: 22  AGASNAYPSIPGTAPIDGGFTDEL--KPIRREVYGNGKIYDISHRYTPEMPSWDSSEG-I 78

Query: 84  GQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPG 143
           G+FL L  SMKNGS  N SEMK  THTGTHVD+PGH +D Y+DAGFD DSLDL VLNG  
Sbjct: 79  GRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDKYYDAGFDVDSLDLQVLNGLA 138

Query: 144 LLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-FDTSYVGFMADGAKWL 202
           LLVDVP+DKN+TAEV++SL+IPKGV RVLFRTLNTDR+LMFKK FDTSYVGFM DGA+WL
Sbjct: 139 LLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMFKKEFDTSYVGFMKDGAQWL 198

Query: 203 VENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRM 262
           V+NTDIKLVG+DYLSVAA+DD+I +H   L++RE I VEGLKLD V AGLYS+HCLPLR+
Sbjct: 199 VDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGLKLDGVKAGLYSVHCLPLRL 258

Query: 263 VGAEGSPVRCILI 275
           VGAEGSP+RCILI
Sbjct: 259 VGAEGSPIRCILI 271

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575656|ref|XP_003555954.1| PREDICTED: kynurenine formamidase-like [Glycine max]

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 166/227 (73%), Positives = 196/227 (86%), Gaps = 2/227 (0%)

Query: 51  PVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHT 110
           P RREVYG GRIFDI+H+   ++P +++  G +GQFL LP SMKNGS  N SEMKF THT
Sbjct: 29  PPRREVYGNGRIFDISHRYQPEMPEWESNDG-IGQFLWLPKSMKNGSLANNSEMKFPTHT 87

Query: 111 GTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRR 170
           GTHVDAPGH FDHYF AGFD D+LDLD+LNGP +LVDVPRD N+TA+V++SLNIP+GV R
Sbjct: 88  GTHVDAPGHVFDHYFHAGFDVDTLDLDILNGPAMLVDVPRDSNITAQVMKSLNIPRGVIR 147

Query: 171 VLFRTLNTDRQLMFKK-FDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHH 229
           VLFRTLNTDR+LMF+K +D+SYVGF ADGAKWLVENTDIKLVG+DYLSVA++D +I +H 
Sbjct: 148 VLFRTLNTDRRLMFQKEWDSSYVGFTADGAKWLVENTDIKLVGIDYLSVASYDYLIPSHL 207

Query: 230 ELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK 276
             L++REII VEGLKLD VPAGLYS+HCLPLR+ GAEGSP+RCILIK
Sbjct: 208 VFLKDREIILVEGLKLDDVPAGLYSVHCLPLRLAGAEGSPIRCILIK 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2122053	272	AT4G35220 "AT4G35220" [Arabido	0.945	0.959	0.667	7.3e-91
TAIR|locus:2823650	271	AT1G44542 "AT1G44542" [Arabido	0.931	0.948	0.628	4.7e-87
TAIR|locus:2124231	255	AT4G34180 "AT4G34180" [Arabido	0.887	0.960	0.661	1.3e-86
UNIPROTKB|Q747B8	227	GSU3349 "Cyclase/hydrolase, pu	0.731	0.889	0.334	1.2e-24
TIGR_CMR|GSU_3349	227	GSU_3349 "cyclase, putative" [	0.731	0.889	0.334	1.2e-24
UNIPROTKB|Q3Z8N2	208	DET0641 "Cyclase, putative" [D	0.735	0.975	0.311	1.8e-23
TIGR_CMR|DET_0641	208	DET_0641 "cyclase, putative" [	0.735	0.975	0.311	1.8e-23
TIGR_CMR|DET_0675	208	DET_0675 "cyclase, putative" [	0.735	0.975	0.311	1.8e-23
UNIPROTKB|A9VHP8	209	kynB "Kynurenine formamidase"	0.626	0.827	0.364	1.9e-21
UNIPROTKB|Q81CK1	209	kynB "Kynurenine formamidase"	0.615	0.813	0.373	1.9e-21

TAIR|locus:2122053 AT4G35220 "AT4G35220" [Arabidopsis thaliana (taxid:3702)]

 Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
 Identities = 179/268 (66%), Positives = 218/268 (81%)

Query:    11 FLLPFVIFTLLALTVAANDEAYPTTT-TAP-DCSLSEELLIKPVRREVYGGGRIFDITHQ 68
             FLL  +    L ++  A++ AYP+   TAP D   ++EL  KP+RREVYG G+I+DI+H+
Sbjct:     8 FLLTLLSLPSLLISAGASN-AYPSIPGTAPIDGGFTDEL--KPIRREVYGNGKIYDISHR 64

Query:    69 VTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAG 128
              T ++PS+D+  G +G+FL L  SMKNGS  N SEMK  THTGTHVD+PGH +D Y+DAG
Sbjct:    65 YTPEMPSWDSSEG-IGRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDKYYDAG 123

Query:   129 FDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-F 187
             FD DSLDL VLNG  LLVDVP+DKN+TAEV++SL+IPKGV RVLFRTLNTDR+LMFKK F
Sbjct:   124 FDVDSLDLQVLNGLALLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMFKKEF 183

Query:   188 DTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDH 247
             DTSYVGFM DGA+WLV+NTDIKLVG+DYLSVAA+DD+I +H   L++RE I VEGLKLD 
Sbjct:   184 DTSYVGFMKDGAQWLVDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGLKLDG 243

Query:   248 VPAGLYSIHCLPLRMVGAEGSPVRCILI 275
             V AGLYS+HCLPLR+VGAEGSP+RCILI
Sbjct:   244 VKAGLYSVHCLPLRLVGAEGSPIRCILI 271

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2823650 AT1G44542 "AT1G44542" [Arabidopsis thaliana (taxid:3702)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 164/261 (62%), Positives = 209/261 (80%)

Query:    18 FTLLALTVAANDEAYPTTTTAPDCSLSEELLIKPVRREVYGGGR-IFDITHQVTVDLPSY 76
             F+ + +T A  DEA+P+  T    +  +   +KP+  EVY G R I+DI+HQ T +LP +
Sbjct:    13 FSSINITFAV-DEAFPSIPTTFSVATKQHYDVKPIHHEVYDGERKIYDISHQYTPELPVW 71

Query:    77 DTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDL 136
             ++  G LG FLRL VSMKNGS  NIS+M+ + H+GTHVDAPGHF DHY+++GFD DSLDL
Sbjct:    72 ESSEG-LGNFLRLAVSMKNGSDANISKMELSVHSGTHVDAPGHFHDHYYESGFDTDSLDL 130

Query:   137 DVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-FDTSYVGFM 195
              +LNGP LLVDVPRDKN++AEV++SL+IP+G+RRVLF+TLNTDR+LMFKK FD+S+VGFM
Sbjct:   131 QILNGPALLVDVPRDKNISAEVMKSLHIPRGIRRVLFKTLNTDRRLMFKKEFDSSFVGFM 190

Query:   196 ADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSI 255
              DGAKWLVENTDIKLVG+DYLS AA+D+  + H  +L  R+IIPVE LKLD V  G+Y++
Sbjct:   191 VDGAKWLVENTDIKLVGLDYLSFAAYDEAPATHRFILERRDIIPVEALKLDDVEVGMYTL 250

Query:   256 HCLPLRMVGAEGSPVRCILIK 276
             HCLPLR+VGAEG+P RCILIK
Sbjct:   251 HCLPLRLVGAEGAPTRCILIK 271

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2124231 AT4G34180 "AT4G34180" [Arabidopsis thaliana (taxid:3702)]

 Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
 Identities = 166/251 (66%), Positives = 205/251 (81%)

Query:    31 AYPTTTTAPDCSLSEELLI---KPVRREVYGGGRIFDITHQVTVDLPSYDTEGGRLGQ-F 86
             ++P    A   SLS  LL    KP+RREVY GG+I+DI+H+ T ++P++++  G LG+ F
Sbjct:     6 SFPLFLFAVVLSLSSSLLADDPKPIRREVYEGGKIYDISHRYTPEIPAWESSEG-LGKTF 64

Query:    87 LRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLV 146
             LRL  SMKNGSF N+SEMK + H+GTHVDAPGHF+D+Y+DAGFD DSLDL VLNGP LLV
Sbjct:    65 LRLAASMKNGSFANVSEMKLSVHSGTHVDAPGHFWDNYYDAGFDTDSLDLQVLNGPALLV 124

Query:   147 DVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKK-FDTSYVGFMADGAKWLVEN 205
             DVPRDKN+TAEV+ESL+I +GVRRVLFRT NTD++LMFKK FD+S+ GFM DGAKWLVEN
Sbjct:   125 DVPRDKNITAEVMESLHIQRGVRRVLFRTSNTDKRLMFKKEFDSSFAGFMTDGAKWLVEN 184

Query:   206 TDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGA 265
             TDIKL+G+DYLS AAF++  + H  +L+ R+IIPVE LKLD V  G YS+HCLPLR+VGA
Sbjct:   185 TDIKLIGLDYLSFAAFEESPATHRVILKGRDIIPVEALKLDGVEVGTYSLHCLPLRLVGA 244

Query:   266 EGSPVRCILIK 276
             EG+P RCILIK
Sbjct:   245 EGAPTRCILIK 255

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005618 "cell wall" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006096 "glycolysis" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q747B8 GSU3349 "Cyclase/hydrolase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 72/215 (33%), Positives = 110/215 (51%)

Query:    61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVS-MKNGSFCNISEMKFTTHTGTHVDAPGH 119
             +I DIT  ++ DLP Y  +      F   PV+ +  G   N+S +   TH GTH+D P H
Sbjct:     2 KIIDITVSLSPDLPVYPGDP----PFSLEPVARVARGDGANVSRITLGTHAGTHIDVPRH 57

Query:   120 FFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTD 179
               D     G   D + LD+L G   ++++     +    L  L + KG  R++ +T N+ 
Sbjct:    58 LRDD----GASVDQVPLDLLTGKARVIELHDVIAIGRRELAHLPV-KGEERIILKTANS- 111

Query:   180 RQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIP 239
             R      F  SY     DGA++L E    +LVG+DYLS+  F +    H ++L +  I+ 
Sbjct:   112 RLWSHAGFLDSYASLTPDGARYLAE-VGTRLVGIDYLSIGPFGNEAEVH-QILLDAGILI 169

Query:   240 VEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 274
             +EGL L  V  G Y + CLPL++ G +G+P R +L
Sbjct:   170 LEGLNLADVEPGHYELLCLPLKIAGGDGAPARALL 204

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_3349 GSU_3349 "cyclase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 72/215 (33%), Positives = 110/215 (51%)

Query:    61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVS-MKNGSFCNISEMKFTTHTGTHVDAPGH 119
             +I DIT  ++ DLP Y  +      F   PV+ +  G   N+S +   TH GTH+D P H
Sbjct:     2 KIIDITVSLSPDLPVYPGDP----PFSLEPVARVARGDGANVSRITLGTHAGTHIDVPRH 57

Query:   120 FFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTD 179
               D     G   D + LD+L G   ++++     +    L  L + KG  R++ +T N+ 
Sbjct:    58 LRDD----GASVDQVPLDLLTGKARVIELHDVIAIGRRELAHLPV-KGEERIILKTANS- 111

Query:   180 RQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIP 239
             R      F  SY     DGA++L E    +LVG+DYLS+  F +    H ++L +  I+ 
Sbjct:   112 RLWSHAGFLDSYASLTPDGARYLAE-VGTRLVGIDYLSIGPFGNEAEVH-QILLDAGILI 169

Query:   240 VEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 274
             +EGL L  V  G Y + CLPL++ G +G+P R +L
Sbjct:   170 LEGLNLADVEPGHYELLCLPLKIAGGDGAPARALL 204

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q3Z8N2 DET0641 "Cyclase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 68/218 (31%), Positives = 122/218 (55%)

Query:    61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHF 120
             +I+D++ ++  ++ S+  +G      ++L  S++ G   N+ ++  T H G+H+DAP HF
Sbjct:     3 KIYDLSPEIRPEMISWPGDGPPQ---IKLLHSIRGGFPTNLGQLTMTLHNGSHIDAPLHF 59

Query:   121 FDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDR 180
             F+     G     + L++L G   ++     K +T ++LE   + +GV R++   L TD 
Sbjct:    60 FED----GDGVGEIPLEILIGNVRVLCFSGVKTITRDMLEQAEL-RGVTRLI---LATDN 111

Query:   181 QLMFKK--FDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREII 238
             + ++ K  FD +Y       A++L E   I+L+G+DYLSV  F++    H  LL +R ++
Sbjct:   112 ETLWDKPDFDRNYTYIDIGAARYLTE-IGIRLLGIDYLSVEDFEETQGVHKHLL-SRGVV 169

Query:   239 PVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK 276
              +E L+L  V  G Y + CLPL++   +G+P R ILI+
Sbjct:   170 ILESLQLAGVAEGDYELFCLPLKLGKVDGAPARVILIE 207

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_0641 DET_0641 "cyclase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 68/218 (31%), Positives = 122/218 (55%)

Query:    61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHF 120
             +I+D++ ++  ++ S+  +G      ++L  S++ G   N+ ++  T H G+H+DAP HF
Sbjct:     3 KIYDLSPEIRPEMISWPGDGPPQ---IKLLHSIRGGFPTNLGQLTMTLHNGSHIDAPLHF 59

Query:   121 FDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDR 180
             F+     G     + L++L G   ++     K +T ++LE   + +GV R++   L TD 
Sbjct:    60 FED----GDGVGEIPLEILIGNVRVLCFSGVKTITRDMLEQAEL-RGVTRLI---LATDN 111

Query:   181 QLMFKK--FDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREII 238
             + ++ K  FD +Y       A++L E   I+L+G+DYLSV  F++    H  LL +R ++
Sbjct:   112 ETLWDKPDFDRNYTYIDIGAARYLTE-IGIRLLGIDYLSVEDFEETQGVHKHLL-SRGVV 169

Query:   239 PVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK 276
              +E L+L  V  G Y + CLPL++   +G+P R ILI+
Sbjct:   170 ILESLQLAGVAEGDYELFCLPLKLGKVDGAPARVILIE 207

GO:0008150 "biological_process" evidence=ND

GO:0009975 "cyclase activity" evidence=ISS

TIGR_CMR|DET_0675 DET_0675 "cyclase, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 68/218 (31%), Positives = 122/218 (55%)

Query:    61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHF 120
             +I+D++ ++  ++ S+  +G      ++L  S++ G   N+ ++  T H G+H+DAP HF
Sbjct:     3 KIYDLSPEIRPEMISWPGDGPPQ---IKLLHSIRGGFPTNLGQLTMTLHNGSHIDAPLHF 59

Query:   121 FDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDR 180
             F+     G     + L++L G   ++     K +T ++LE   + +GV R++   L TD 
Sbjct:    60 FED----GDGVGEIPLEILIGNVRVLCFSGVKTITRDMLEQAEL-RGVTRLI---LATDN 111

Query:   181 QLMFKK--FDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREII 238
             + ++ K  FD +Y       A++L E   I+L+G+DYLSV  F++    H  LL +R ++
Sbjct:   112 ETLWDKPDFDRNYTYIDIGAARYLTE-IGIRLLGIDYLSVEDFEETQGVHKHLL-SRGVV 169

Query:   239 PVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK 276
              +E L+L  V  G Y + CLPL++   +G+P R ILI+
Sbjct:   170 ILESLQLAGVAEGDYELFCLPLKLGKVDGAPARVILIE 207

GO:0008150 "biological_process" evidence=ND

GO:0009975 "cyclase activity" evidence=ISS

UNIPROTKB|A9VHP8 kynB "Kynurenine formamidase" [Bacillus weihenstephanensis KBAB4 (taxid:315730)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 67/184 (36%), Positives = 104/184 (56%)

Query:    92 SMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRD 151
             S +N    N+ ++  + HTGTH+DAP HF D+  D G     LD+ V  GP  ++DV   
Sbjct:    33 SKENSGSVNVGKLTMSIHTGTHIDAPFHF-DN--D-GKKVLDLDIQVYVGPARIIDVSNL 88

Query:   152 KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLV 211
             +++  + LE+ ++ +GV R+L RT +  +     +F        AD A +L E   I+L+
Sbjct:    89 ESIGKKELENFHL-EGVERLLLRTSSHGKA---NEFPDVIPHLRADIAAFLSEK-GIRLI 143

Query:   212 GVDYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPV 270
             GVD  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPV
Sbjct:   144 GVDVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVVDGDYELIALPLALTDADGSPV 202

Query:   271 RCIL 274
             R ++
Sbjct:   203 RAVI 206

GO:0004061 "arylformamidase activity" evidence=ISS

GO:0019441 "tryptophan catabolic process to kynurenine" evidence=ISS

GO:0043420 "anthranilate metabolic process" evidence=ISS

UNIPROTKB|Q81CK1 kynB "Kynurenine formamidase" [Bacillus cereus ATCC 14579 (taxid:226900)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 68/182 (37%), Positives = 106/182 (58%)

Query:    94 KNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKN 153
             ++GS  N+ ++  + HTGTH+DAP HF D+  D G     LD+ V  GP  ++DV   ++
Sbjct:    36 ESGSV-NVGKLTMSIHTGTHIDAPFHF-DN--D-GKKVLDLDVQVYVGPARIIDVSNLES 90

Query:   154 LTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGV 213
             +  + LES ++ +GV R+L RT +  +    ++F        AD A +L E   I+L+GV
Sbjct:    91 IGKKELESFHL-EGVERLLLRTSSHGKA---EEFPEVIPHLRADIASFLSEK-GIRLIGV 145

Query:   214 DYLSVAAFDDI-ISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRC 272
             D  SV   DD  ++AHH+L ++   I +E + LDHV  G Y +  LPL +  A+GSPVR 
Sbjct:   146 DVPSVDPLDDKELAAHHQLFKHGIHI-LENVVLDHVADGDYELIALPLALTDADGSPVRA 204

Query:   273 IL 274
             ++
Sbjct:   205 VI 206

GO:0004061 "arylformamidase activity" evidence=IDA

GO:0019441 "tryptophan catabolic process to kynurenine" evidence=IGC

GO:0043420 "anthranilate metabolic process" evidence=IGC

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.1.9	0.737
3rd Layer	3.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
COG1878	218	COG1878, COG1878, Kynurenine formamidase [Amino ac	5e-31
TIGR03035	206	TIGR03035, trp_arylform, arylformamidase	4e-25
pfam04199	162	pfam04199, Cyclase, Putative cyclase	1e-24

>gnl|CDD|224790 COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]

 Score =  114 bits (288), Expect = 5e-31
 Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)

Query: 60  GRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGH 119
            ++ D++H +   +P++  +           ++       N+S +    HTGTH+DAP H
Sbjct: 4   MKVIDLSHPLEPGMPTWPGDPP----VEIERIATLAKDGFNVSIITLGEHTGTHIDAPLH 59

Query: 120 FFDHYFDAGFDADSLDLDVLNGPGLLVDVPR---DKNLTAEVLESLNIPKGVRRVLFRTL 176
           F     + G   D + L+   GPG+++D+     D+ +T + +E+ +       VL RT 
Sbjct: 60  F----IEGGLSIDEIPLESFIGPGVVIDISGKDPDEVITEDDIEAWDAEHPGDIVLIRTG 115

Query: 177 NTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAF-DDIISAHHELLRNR 235
            + R      F   + G   + A++L+E   +K VG+D  S      +   AH  LL   
Sbjct: 116 WSKRWGDEPAFQYHFPGISIEAAEYLIER-GVKAVGIDTPSTDPGLSEDFPAHRLLLSA- 173

Query: 236 EIIPVEGL-KLDHVPAGLYS-IHCLPLRMVGAEGSPVRCILIK 276
            I+ VE L  LD +PAG       LPL++ G +GSPVR + + 
Sbjct: 174 GILIVENLTNLDKLPAGGAYLFLALPLKIKGGDGSPVRVLALV 216

Length = 218

>gnl|CDD|132080 TIGR03035, trp_arylform, arylformamidase

 Score = 99.0 bits (247), Expect = 4e-25
 Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 29/223 (13%)

Query: 61  RIFDITHQVTVDLPSY--DTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPG 118
           R +DI+  +    P++  DT   +         S +     N+  +  + HTG H DAP 
Sbjct: 1   RWWDISPPLNNATPTWPGDTPFSQ-----EWVWSKEETCPVNVGRITLSPHTGAHADAPL 55

Query: 119 HFFDHYFDAGFDAD-----SLDLDVLNGPGLLVD-VPRDKNLTAEVLESLNIPKGVRRVL 172
           H+         D D      + LDV  GP  ++  +   + +  E L S  + +   RVL
Sbjct: 56  HY---------DNDGAPIGDVPLDVYLGPCRVIHCLGAGELIDPEHLRSA-LLELPPRVL 105

Query: 173 FRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDD-IISAHHEL 231
            RT           +   +     D  + L E   ++L+G+D  SV   D   + AHH L
Sbjct: 106 LRTY---LPAPANAWPDDFPAVAPDTIELLAEK-GVRLIGIDTPSVDPLDSKTLDAHHAL 161

Query: 232 LRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 274
            R+   I +E + LD V  G Y +  LPL+   A+ SPVR +L
Sbjct: 162 FRHGMAI-LENVVLDDVAEGDYELIALPLKFTDADASPVRAVL 203

One of several pathways of tryptophan degradation is as follows: tryptophan 2,3-dioxygenase (1.13.11.11) uses 02 to convert Trp to L-formylkynurenine. Arylformamidase (3.5.1.9) hydrolyzes the product to L-kynurenine and formate. Kynureninase (3.7.1.3) hydrolyzes L-kynurenine to anthranilate plus alanine. Members of the seed alignment for this model are bacterial predicted metal-dependent hydrolases. All are supported as arylformamidase (3.5.1.9) by an operon structure in which kynureninase and/or tryptophan 2,3-dioxygenase genes are adjacent. The members from Bacillus cereus, Pseudomonas aeruginosa and Ralstonia metallidurans were characterized. An example from Pseudomonas fluorescens is given the gene symbol qbsH instead of kynB because of its role in quinolobactin biosynthesis, which begins with tryptophan. All members of this family should be arylformamidase (3.5.1.9) [Energy metabolism, Amino acids and amines]. Length = 206

>gnl|CDD|217960 pfam04199, Cyclase, Putative cyclase

 Score = 96.3 bits (240), Expect = 1e-24
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%)

Query: 62  IFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFF 121
           I D++H +   +P Y    G          + ++G   N  ++  +THTGTHVDAPGHF 
Sbjct: 1   IIDLSHPLDPGMPVY---PGHPTSGEAGDGTGEDGDGYNTDKITTSTHTGTHVDAPGHFI 57

Query: 122 DHYFDAGFDADSLDLDVLNGPGLLVDVPRDKN----LTAEVLE-----SLNIPKGVRRVL 172
                 G   D L L+   GPG+L+DV         +TA  LE        I  G   VL
Sbjct: 58  FG--PDGRTIDELPLEWFVGPGVLLDVAHKLPPGYEITAADLEAALKQGGTIKPGD-IVL 114

Query: 173 FRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSV 218
            RT   D++    ++  ++ G   + A+WLVE   +K VG+D  S+
Sbjct: 115 IRTGW-DKRWGTPEYYNNHPGLSLEAAQWLVER-GVKAVGIDTPSL 158

Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form part of the active site. Length = 162

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
TIGR03035	206	trp_arylform arylformamidase. One of several pathw	100.0
COG1878	218	Kynurenine formamidase [Amino acid transport and m	100.0
PF04199	171	Cyclase: Putative cyclase; InterPro: IPR007325 Pro	100.0

>TIGR03035 trp_arylform arylformamidase

Probab=100.00  E-value=3.9e-57  Score=397.65  Aligned_cols=203  Identities=28%  Similarity=0.451  Sum_probs=179.2

Q ss_pred             eEEEcceeccCCCCcCCCCCCccceEEeeeeeccCCceeEEeEEEEcCCcccccccccccccCcCCCCccccccCccccc
Q 023836           61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLN  140 (276)
Q Consensus        61 kiiDLS~~i~~~mP~~p~~p~~~~~~~~~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H~~~~~~~~G~~id~i~l~~~~  140 (276)
                      |+|||||+++++||.||++|+ +  .+....+..+++.+|.+.++|++|+|||+|||+||.    ++|++++++|++.|+
T Consensus         1 ~iiDLS~~i~~~~p~~p~~p~-~--~~~~~~~~~~~~~~~~~~i~~~~H~GTHiDAP~Hf~----~~g~~id~~pl~~~~   73 (206)
T TIGR03035         1 RWWDISPPLNNATPTWPGDTP-F--SQEWVWSKEETCPVNVGRITLSPHTGAHADAPLHYD----NDGAPIGDVPLDVYL   73 (206)
T ss_pred             CEEEeccCcCCCCCccCCCCC-e--eEEEEEEecCCCcEEEEEEEECCccccccccchhhC----CCCCCccccchHHhe
Confidence            699999999999999999987 4  233233444445599999999999999999999998    799999999999999


Q ss_pred             ccEEEEEc-CCCCCCCHHHHhcCCCCCCCeEEEEEecCCccccccccCCCCCcccCHHHHHHHHHcCCceEEEecCCCCC
Q 023836          141 GPGLLVDV-PRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVA  219 (276)
Q Consensus       141 g~~vvlDv-~~~~~It~edl~~~~i~~g~diVL~rTg~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~gik~VGiD~~Svd  219 (276)
                      |+++|||+ +.+..||+|||+++.++.+ |+|||||||..   ...+|..++||++.|+|+||+|+ +|++||+|++|+|
T Consensus        74 g~~~vid~~~~~~~it~edl~~~~~~~~-d~vl~~Tg~~~---~~~~y~~~~Pgls~eaa~~L~e~-~i~~iG~D~~s~d  148 (206)
T TIGR03035        74 GPCRVIHCLGAGELIDPEHLRSALLELP-PRVLLRTYLPA---PANAWPDDFPAVAPDTIELLAEK-GVRLIGIDTPSVD  148 (206)
T ss_pred             ecEEEEEEeCCCCccCHHHHHhhhhcCC-CEEEEECCCCC---CccccCCCCCeeCHHHHHHHHHC-CCeEEEECCCccC
Confidence            99999994 4567899999998876655 99999999942   23458889999999999999997 9999999999999


Q ss_pred             CCC-CChHHHHHHHhcCCcceEEcccCCCCCCCcEEEEEeccccCCCcccceeeEEEC
Q 023836          220 AFD-DIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK  276 (276)
Q Consensus       220 ~~~-~~~p~H~~lL~~~gi~iiE~LnLd~L~~~~~~~~~~PLki~G~~GsPvR~vAi~  276 (276)
                      ... ..+++|+.||+ +||+++||++|++|++++|.|+|+|||++|+||||||+||++
T Consensus       149 ~~~~~~~~~H~~ll~-~gi~iiE~~~L~~l~~~~~~~~~~PLki~g~~GsPvR~va~~  205 (206)
T TIGR03035       149 PLDSKTLDAHHALFR-HGMAILENVVLDDVAEGDYELIALPLKFTDADASPVRAVLRP  205 (206)
T ss_pred             CCCCCchHHHHHHHh-CCeeEEeccccccCCCCCeEEEEeCcccCCCCccCeEEEEec
Confidence            873 56899999997 799999999999999999999999999999999999999984

One of several pathways of tryptophan degradation is as follows: tryptophan 2,3-dioxygenase (1.13.11.11) uses 02 to convert Trp to L-formylkynurenine. Arylformamidase (3.5.1.9) hydrolyzes the product to L-kynurenine and formate. Kynureninase (3.7.1.3) hydrolyzes L-kynurenine to anthranilate plus alanine. Members of the seed alignment for this model are bacterial predicted metal-dependent hydrolases. All are supported as arylformamidase (3.5.1.9) by an operon structure in which kynureninase and/or tryptophan 2,3-dioxygenase genes are adjacent. The members from Bacillus cereus, Pseudomonas aeruginosa and Ralstonia metallidurans were characterized. An example from Pseudomonas fluorescens is given the gene symbol qbsH instead of kynB because of its role in quinolobactin biosynthesis, which begins with tryptophan. All members of this family should be arylformamidase (3.5.1.9).

>COG1878 Kynurenine formamidase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-55  Score=388.90  Aligned_cols=209  Identities=30%  Similarity=0.499  Sum_probs=186.0

Q ss_pred             CCceEEEcceeccCCCCcCCCCCCccceEEeeeeeccCCceeEEeEEEEcCCcccccccccccccCcCCCCccccccCcc
Q 023836           58 GGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLD  137 (276)
Q Consensus        58 ~~~kiiDLS~~i~~~mP~~p~~p~~~~~~~~~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H~~~~~~~~G~~id~i~l~  137 (276)
                      +.+++|||||+++++||+||++|+   ..++...++++++ |+.+.+++++|+|||||||.||.    +||.++|++|++
T Consensus         2 ~~~~~iDLS~~l~~~~p~~pg~p~---~~ie~~~~~~~~g-~~~~~i~~~~HtGTHiDAP~Hf~----~~G~~id~ipl~   73 (218)
T COG1878           2 GMMKVIDLSHPLEPGMPTWPGDPP---VEIERIATLAKDG-FNVSIITLGEHTGTHIDAPLHFI----EGGLSIDEIPLE   73 (218)
T ss_pred             CcceEEEcccccCCCCCCCCCCCC---cEEEEeEEecCCc-EEEEEEEecCccccccccHHhhc----CCCCccccCCHH
Confidence            568999999999999999999997   4555666677666 99999999999999999999999    899999999999


Q ss_pred             cccccEEEEEcCC---CCCCCHHHHhcCCCCCCCeEEEEEecCCccccccccCCCCCcccCHHHHHHHHHcCCceEEEec
Q 023836          138 VLNGPGLLVDVPR---DKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVD  214 (276)
Q Consensus       138 ~~~g~~vvlDv~~---~~~It~edl~~~~i~~g~diVL~rTg~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~gik~VGiD  214 (276)
                      .|+|+++|||++.   +..++.++++++.....+++|++||||.+++....+|..++||++.|+|+||+|+ +||+||+|
T Consensus        74 ~~ig~~~Vid~~~~~~~~~~~~~~~~a~~~~~~g~~v~i~Tgw~~~~~~~~~f~~~~Pg~~~eaa~~L~e~-~VkaVGiD  152 (218)
T COG1878          74 SFIGPGVVIDISGKDPDEVITEDDIEAWDAEHPGDIVLIRTGWSKRWGDEPAFQYHFPGISIEAAEYLIER-GVKAVGID  152 (218)
T ss_pred             HhEeeeEEEEecCCCcccccCHHHhhhhcccCCccEEEEEccchhhcCCcchhhccCcccCHHHHHHHHHc-CCeEEEec
Confidence            9999999999995   4579999999886544359999999998875433336789999999999999996 99999999


Q ss_pred             CCCCCCCC-CChHHHHHHHhcCCcceEEcc-cCCCCCCCcE-EEEEeccccCCCcccceeeEEEC
Q 023836          215 YLSVAAFD-DIISAHHELLRNREIIPVEGL-KLDHVPAGLY-SIHCLPLRMVGAEGSPVRCILIK  276 (276)
Q Consensus       215 ~~Svd~~~-~~~p~H~~lL~~~gi~iiE~L-nLd~L~~~~~-~~~~~PLki~G~~GsPvR~vAi~  276 (276)
                      ++|+|+.. ..+++|+.||. +|++++|+| ||++|+.+.+ .+.++|||++|++|||||++|+.
T Consensus       153 t~s~d~~~~~~~~~H~~lL~-~~~~i~E~l~nl~~l~~~~~~~~~~lPlk~~g~~g~PvRv~a~~  216 (218)
T COG1878         153 TPSTDPGLSEDFPAHRLLLS-AGILIVENLTNLDKLPAGGAYLFLALPLKIKGGDGSPVRVLALV  216 (218)
T ss_pred             CCccCcccccchHHHHHHHh-CCCEEEEeeccccccCCCceEEEEecCceecCCCCCceEEEEEc
Confidence            99999874 46999999997 899999999 7999998765 89999999999999999999974

>PF04199 Cyclase: Putative cyclase; InterPro: IPR007325 Proteins in this family are thought to be cyclase enzymes

Probab=100.00  E-value=1.3e-39  Score=277.61  Aligned_cols=152  Identities=32%  Similarity=0.522  Sum_probs=104.0

Q ss_pred             EEEcceeccCCCCcCCCCCCccceEEe----eeeeccCCceeEEeEEEEcCCcccccccccc-cccCcCCCCccccccCc
Q 023836           62 IFDITHQVTVDLPSYDTEGGRLGQFLR----LPVSMKNGSFCNISEMKFTTHTGTHVDAPGH-FFDHYFDAGFDADSLDL  136 (276)
Q Consensus        62 iiDLS~~i~~~mP~~p~~p~~~~~~~~----~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H-~~~~~~~~G~~id~i~l  136 (276)
                      ||||||+|+++||.|| +|+ +.....    .....++|..++.+.++|++|+|||+|||+| |.    ++|.+++++|+
T Consensus         1 iiDLS~~i~~~~p~~p-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~H~GTHiDap~H~~~----~~g~~i~~~pl   74 (171)
T PF04199_consen    1 IIDLSHPISNGMPVWP-DPP-FEFETISSIEKDGSYPEGDGFNVDSITMSTHTGTHIDAPAHYFI----PDGATIDEIPL   74 (171)
T ss_dssp             EEE----B-TT---GG--GG-GS-EEE-------EEEEECTCEEEEEEEETTSSSEEE-GGGC-S----TTT-TGGGSSC
T ss_pred             cEEcceEcCCCCCCCC-CCC-cEEEEEeeecccccccccceEEEEEEEeCCCccCCCcccccccC----CCCCCHHHhhh
Confidence            7999999999999999 776 433222    1112345566999999999999999999999 77    79999999999


Q ss_pred             ccccccEEEEEcCC-----CCCCCHHHHhcC------CCCCCCeEEEEEecCCcccc--ccccCCCCCcccCHHHHHHHH
Q 023836          137 DVLNGPGLLVDVPR-----DKNLTAEVLESL------NIPKGVRRVLFRTLNTDRQL--MFKKFDTSYVGFMADGAKWLV  203 (276)
Q Consensus       137 ~~~~g~~vvlDv~~-----~~~It~edl~~~------~i~~g~diVL~rTg~~~~~~--~~~~y~~~~Pgls~eaA~~L~  203 (276)
                      +.|+|||+|||+++     +..||.+||+++      .+++| |+|||||||.++++  ...+|..++|||++|+|+||+
T Consensus        75 ~~~~g~~vviD~~~~~~~~~~~It~~dl~~~~~~~~~~i~~g-divlirTG~~~~~~~~~~~~y~~~~p~ls~eaa~~L~  153 (171)
T PF04199_consen   75 ERFIGPAVVIDVSHDKQPPGEAITAEDLEAAWEAQGVEIRPG-DIVLIRTGWNDKRWEMGTEEYFNDFPGLSPEAAEWLA  153 (171)
T ss_dssp             CCCEEEEEEEETTT------SEE-HHHHTT------S---TT-SEEEEE-CG-GGGT--TSGCGGCT--EE-HCCHHHHH
T ss_pred             hhccCcEEEEeccccccCCCceEcHHHHHhhhcccccccCCC-cEEEEECCchhhhcccCCHhHccCCCcCCHHHHHHHH
Confidence            99999999999998     457999999865      56665 99999999954433  223488889999999999999


Q ss_pred             HcCCceEEEecCCCCCCC
Q 023836          204 ENTDIKLVGVDYLSVAAF  221 (276)
Q Consensus       204 e~~gik~VGiD~~Svd~~  221 (276)
                      ++ +|++||+|++|+|++
T Consensus       154 ~~-~v~~vG~D~~s~d~~  170 (171)
T PF04199_consen  154 ER-GVKAVGIDTPSVDPP  170 (171)
T ss_dssp             HC-T-SEEEESSSSS--S
T ss_pred             HC-CCCEEEECCCCCCCC
Confidence            97 999999999999974

They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form a part of the active site.; PDB: 2B0A_A 3KRV_A 1R61_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	276
1r61_A	207	The Structure Of Predicted Metal-Dependent Hydrolas		3e-14
4j0n_A	263	Crystal Structure Of A Manganese Dependent Isatin H		3e-04

>pdb|1R61|A Chain A, The Structure Of Predicted Metal-Dependent Hydrolase From Bacillus Stearothermophilus Length = 207

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 17/215 (7%)
Query: 61  RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHF 120
           +++D+T  +   +P Y  +  +  +      ++ NG +   S +    HTGTH+DAP H 
Sbjct: 4   KVYDVTAPIYEGMPVYKNKPEKQPK----RTTITNG-YVTESRIDMDVHTGTHIDAPLHM 58
Query: 121 FDHYFDAGFDADSLDLDVLNGPGLLVDVPR-DKNLTAEVLESLNIPKGVRRVLFRTLNTD 179
            +     G   +++ L+ L GP  L D+   +  +T + +  L+I +G   VLF+T N+ 
Sbjct: 59  VE----GGATFETIPLNDLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNS- 112
Query: 180 RQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIP 239
                  F   ++    D A++L +   I+ VG+D L +    +    H  L     II 
Sbjct: 113 ---FEDAFHFEFIFVAEDAARYLADKQ-IRGVGIDALGIERAQEGHPTHKTLFSAGVII- 167
Query: 240 VEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCIL 274
           +EGL+L  VP G Y +   PL++VG + +P R +L
Sbjct: 168 IEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLL 202

>pdb|4J0N|A Chain A, Crystal Structure Of A Manganese Dependent Isatin Hydrolase Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 22/203 (10%)
Query: 94  KNGSFCNISEMKFTTHTGTHVDAPGHFFDHY-FDAGFDADSLDLDVLNGPGLLVDVPRDK 152
            +G F   + M    H+GTH DAP H+     +  GF  D+LD+  L  P  ++D  ++ 
Sbjct: 58  SDGPFFAWNWMVLGEHSGTHFDAPHHWITGKDYSDGF-TDTLDVQRLIAPVNVIDCSKES 116
Query: 153 N------LTAEVLESLNIPKGV----RRVLFRTLNTDR---QLMFKKFDTS---YVGFMA 196
                  LTA+++++     G       V+ RT    R   +  F   D +     G   
Sbjct: 117 AADPDFLLTADLIKAWEAEHGEIGAGEWVVMRTDWDKRAGDEAAFLNADETGPHSPGPTP 176
Query: 197 DGAKWLVENTDI----KLVGVDYLSVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGL 252
           D  ++L+    +    + +G D       +    AH+ L R+          LD +PA  
Sbjct: 177 DAIEYLLSKKIVGWGSQCIGTDAGQAGGMEPPFPAHNLLHRDNCFGLASLANLDKLPAKG 236
Query: 253 YSIHCLPLRMVGAEGSPVRCILI 275
             +   PL++    GSP+R + +
Sbjct: 237 AILIAAPLKIERGTGSPIRALAL 259

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
1r61_A	207	Metal-dependent hydrolase; zinc-dependent hydrolas	1e-56
2b0a_A	186	Hypothetical protein MJ0783; structural genomics,	5e-36

>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A Length = 207

 Score =  179 bits (457), Expect = 1e-56
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)

Query: 58  GGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAP 117
              +++D+T  +   +P Y  +        +   +     +   S +    HTGTH+DAP
Sbjct: 1   AAMKVYDVTAPIYEGMPVYKNK-----PEKQPKRTTITNGYVTESRIDMDVHTGTHIDAP 55

Query: 118 GHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPR-DKNLTAEVLESLNIPKGVRRVLFRTL 176
            H  +     G   +++ L+ L GP  L D+   +  +T + +  L+I +G   VLF+T 
Sbjct: 56  LHMVEG----GATFETIPLNDLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTK 110

Query: 177 NTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNRE 236
           N+        F   ++    D A++L +   I+ VG+D L +    +    H  L     
Sbjct: 111 NSFE----DAFHFEFIFVAEDAARYLADK-QIRGVGIDALGIERAQEGHPTHKTLFSA-G 164

Query: 237 IIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILI 275
           +I +EGL+L  VP G Y +   PL++VG + +P R +L 
Sbjct: 165 VIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLF 203

>2b0a_A Hypothetical protein MJ0783; structural genomics, PSI, protein STRU initiative; 1.45A {Methanocaldococcus jannaschii} SCOP: c.8.8.1 Length = 186

 Score =  126 bits (318), Expect = 5e-36
 Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 35/216 (16%)

Query: 62  IFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFF 121
           I D+T  +       D E       LR+     +G    +SE+   +H  TH+D P H  
Sbjct: 2   ILDLTQTLINFPRPGDPE-------LRIIEKKIDG--FIVSEIIMGSHLCTHIDYPKHVG 52

Query: 122 DHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQ 181
                   +       ++ G G  + +        +      +P     +L  T  +   
Sbjct: 53  LE------NRIPFKDGIIKGKGYCISL--------DDFPGNKLPAC-DILLIYTGFSKY- 96

Query: 182 LMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNREIIPVE 241
               ++              ++++ +IK VG+D  ++  F+     H  LL N  I+ +E
Sbjct: 97  WGRDEYFEKIPEI--PFLDDIIKS-NIKCVGIDACTIGGFE----EHKRLLSN-NILIIE 148

Query: 242 GLK--LDHVPAGLYSIHCLPLRMVGAEGSPVRCILI 275
            L   L ++    +    LPL++   + SP+RCI I
Sbjct: 149 NLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAI 184

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	276
1r61_A	207	Metal-dependent hydrolase; zinc-dependent hydrolas	100.0
2b0a_A	186	Hypothetical protein MJ0783; structural genomics,	100.0

>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A

Probab=100.00  E-value=1.8e-56  Score=392.43  Aligned_cols=202  Identities=28%  Similarity=0.519  Sum_probs=180.3

Q ss_pred             CceEEEcceeccCCCCcCCCCCCccceEEeeeeeccCCceeEEeEEEEcCCcccccccccccccCcCCCCccccccCccc
Q 023836           59 GGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDV  138 (276)
Q Consensus        59 ~~kiiDLS~~i~~~mP~~p~~p~~~~~~~~~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H~~~~~~~~G~~id~i~l~~  138 (276)
                      ++|+||||||++++||+||++|+ +..  ....++++ + +|.+.++|++|+|||+|||+||.    ++|.+++++|++.
T Consensus         2 ~m~~iDLs~~i~~~~p~~pg~~~-~~~--~~~~~~~~-~-~~~~~i~~~~H~GTH~Dap~H~~----~~g~~i~~~pl~~   72 (207)
T 1r61_A            2 AMKVYDVTAPIYEGMPVYKNKPE-KQP--KRTTITNG-Y-VTESRIDMDVHTGTHIDAPLHMV----EGGATFETIPLND   72 (207)
T ss_dssp             CCCEEECCCCBCTTCCCGGGCGG-GSC--EEEEEEET-T-EEEEEEEEETTSSSEEECCGGGS----CSSCTTCCCCCTT
T ss_pred             CCEEEECcCcccCCCCCCCCCCC-eEE--EEeeecCC-c-eEEeEEEECCCCchhhchHhhcC----CCCcChhhCChhH
Confidence            46899999999999999999987 422  22233444 3 99999999999999999999998    7999999999999


Q ss_pred             ccccEEEEEcCCC-CCCCHHHHhcCCCCCCCeEEEEEecCCccccccccCCCCCcccCHHHHHHHHHcCCceEEEecCCC
Q 023836          139 LNGPGLLVDVPRD-KNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLS  217 (276)
Q Consensus       139 ~~g~~vvlDv~~~-~~It~edl~~~~i~~g~diVL~rTg~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~gik~VGiD~~S  217 (276)
                      |+|||||||+++. ..||.+||++++|++| |+|||||||++    ..+|..++||+++|+|+||+|+ +|++||+|++|
T Consensus        73 ~~g~~vviD~~~~~~~It~~dl~~~~i~~g-d~vlirTg~~~----~~~y~~~~pgls~eaa~~L~~~-~v~~vG~D~~s  146 (207)
T 1r61_A           73 LVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNSF----EDAFHFEFIFVAEDAARYLADK-QIRGVGIDALG  146 (207)
T ss_dssp             TEEEEEEEECTTCCSEECHHHHTTSCCCTT-CEEEEECGGGG----CCSCCTTCCEECHHHHHHHHHH-TCSEEECSSSC
T ss_pred             ccceEEEEEEeCCCCccCHHHHHhccCCCC-cEEEEECCCCC----chhhcCCCcccCHHHHHHHHHC-CCCEEEEcCCc
Confidence            9999999999864 4799999999999876 99999999975    2347788999999999999997 99999999999


Q ss_pred             CCCCCCChHHHHHHHhcCCcceEEcccCCCCCCCcEEEEEeccccCCCcccceeeEEEC
Q 023836          218 VAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK  276 (276)
Q Consensus       218 vd~~~~~~p~H~~lL~~~gi~iiE~LnLd~L~~~~~~~~~~PLki~G~~GsPvR~vAi~  276 (276)
                      +|+.+...++|+.||+ +|++|+|||+|++|++++|+|+|+|||++|++|||||+||+.
T Consensus       147 ~d~~~~~~~~H~~ll~-~gi~iiE~l~L~~L~~~~f~l~~~Plki~g~~gsPvR~vAi~  204 (207)
T 1r61_A          147 IERAQEGHPTHKTLFS-AGVIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLFD  204 (207)
T ss_dssp             SCCSCTTCHHHHHHHH-TTCEEEESCCCTTCCSEEEEEEEEECCBTTCSEEEEEEEEEC
T ss_pred             cCCCCCCCHHHHHHHH-cCCeEEEEeEhhcCCCCcEEEEEECccCCCCcccCeeEEEEe
Confidence            9987533399999996 899999999999999999999999999999999999999984

>2b0a_A Hypothetical protein MJ0783; structural genomics, PSI, protein STRU initiative; 1.45A {Methanocaldococcus jannaschii} SCOP: c.8.8.1

Probab=100.00  E-value=1.9e-49  Score=342.64  Aligned_cols=180  Identities=22%  Similarity=0.319  Sum_probs=157.6

Q ss_pred             eEEEcceeccCCCCcCCCCCCccceEEeeeeeccCCceeEEeEEEEcCCcccccccccccccCcCCCCccccc-cCccc-
Q 023836           61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADS-LDLDV-  138 (276)
Q Consensus        61 kiiDLS~~i~~~mP~~p~~p~~~~~~~~~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H~~~~~~~~G~~id~-i~l~~-  138 (276)
                      |+||||||+++  |+||++|+ +..  ..   ++++ .+|.+.++|++|+|||+|||+||.         +++ +|++. 
T Consensus         1 ~~iDLs~~i~~--p~~pg~~~-~~~--~~---~~~~-g~~~~~i~~~~H~GTHiDap~H~~---------id~~ipl~~g   62 (186)
T 2b0a_A            1 EILDLTQTLIN--FPRPGDPE-LRI--IE---KKID-GFIVSEIIMGSHLCTHIDYPKHVG---------LENRIPFKDG   62 (186)
T ss_dssp             CEEECBCCCCS--CCCTTSCC-CEE--EE---EEET-TEEEEEEECCTTSSSEEECGGGGT---------CCCCCSSGGG
T ss_pred             CEEEeeeEecC--CcCCCCCC-cEE--EE---ecCC-cEEEEEEEecCCcccCccchhhee---------ecccccCCCC
Confidence            58999999998  99999987 422  22   2222 389999999999999999999983         899 99999 


Q ss_pred             -ccccEEEEEcCCCCCCCHHHHhcCCCCCCCeEEEEEecCCccccccccCCCCCcccCHHHHHHHHHcCCceEEEecCCC
Q 023836          139 -LNGPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLS  217 (276)
Q Consensus       139 -~~g~~vvlDv~~~~~It~edl~~~~i~~g~diVL~rTg~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~gik~VGiD~~S  217 (276)
                       |+|||||||++   .||++     +|++| |+|||||||++++. ..+|. ++||+ +|+|+||+|+ +|++||+|++|
T Consensus        63 ~~~g~~vviD~~---~It~~-----~i~~g-d~vlirTg~~~~~~-~~~~~-~~pgl-~eaa~~L~~~-~v~~vG~D~~s  129 (186)
T 2b0a_A           63 IIKGKGYCISLD---DFPGN-----KLPAC-DILLIYTGFSKYWG-RDEYF-EKIPE-IPFLDDIIKS-NIKCVGIDACT  129 (186)
T ss_dssp             CEEEEEEEEETT---TCSSC-----CCCSC-SEEEEECSGGGGTT-SGGGG-GCCCC-CTTHHHHHHS-CCCEEEESSSC
T ss_pred             eEEeEEEEEEEe---ccCHH-----HCCCC-cEEEEECCchhhcC-Cchhh-cCCCH-HHHHHHHHHC-CCCEEEEcCCC
Confidence             99999999994   57766     46666 99999999987642 23465 89999 9999999997 99999999999


Q ss_pred             CCCCCCChHHHHHHHhcCCcceEEccc--CCCCCCCcEEEEEeccccCCCcccceeeEEEC
Q 023836          218 VAAFDDIISAHHELLRNREIIPVEGLK--LDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK  276 (276)
Q Consensus       218 vd~~~~~~p~H~~lL~~~gi~iiE~Ln--Ld~L~~~~~~~~~~PLki~G~~GsPvR~vAi~  276 (276)
                      +|.    +|+|+.||+ +|++++|+|+  |++|++++|+++|+|||++|++|||||+||+.
T Consensus       130 ~d~----~p~H~~ll~-~gi~iiE~l~~nL~~l~~~~f~l~~~Plki~g~~gsP~R~vAi~  185 (186)
T 2b0a_A          130 IGG----FEEHKRLLS-NNILIIENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAIL  185 (186)
T ss_dssp             SSS----HHHHHHHHH-TTCEEEECBCGGGGGGBTCEEEEEEEECSCCSCSEEEEEEEEEE
T ss_pred             CCC----cHHHHHHHH-CCcEEEEehhhhHhhCCCCcEEEEEECcccCCCcccCeEEEEEc
Confidence            997    999999996 8999999995  99999999999999999999999999999983

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	276
d1r61a_	205	c.8.8.1 (A:) Unnamed protein {Bacillus stearotherm	3e-41
d2b0aa1	186	c.8.8.1 (A:1-186) Hypothetical protein MJ0783 {Met	1e-25

>d1r61a_ c.8.8.1 (A:) Unnamed protein {Bacillus stearothermophilus [TaxId: 1422]} Length = 205

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Unnamed protein
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =  139 bits (351), Expect = 3e-41
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)

Query: 58  GGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAP 117
              +++D+T  +   +P Y  +        +   +     +   S +    HTGTH+DAP
Sbjct: 1   AAMKVYDVTAPIYEGMPVYKNK-----PEKQPKRTTITNGYVTESRIDMDVHTGTHIDAP 55

Query: 118 GHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPR-DKNLTAEVLESLNIPKGVRRVLFRTL 176
            H  +     G   +++ L+ L GP  L D+   +  +T + +  L+I +G   VLF+T 
Sbjct: 56  LHMVEG----GATFETIPLNDLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTK 110

Query: 177 NTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAAFDDIISAHHELLRNRE 236
           N+        F   ++    D A++L +   I+ VG+D L +    +    H  L     
Sbjct: 111 NSFE----DAFHFEFIFVAEDAARYLADK-QIRGVGIDALGIERAQEGHPTHKTLFSA-G 164

Query: 237 IIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILI 275
           +I +EGL+L  VP G Y +   PL++VG + +P R +L 
Sbjct: 165 VIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLF 203

>d2b0aa1 c.8.8.1 (A:1-186) Hypothetical protein MJ0783 {Methanococcus jannaschii [TaxId: 2190]} Length = 186

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Hypothetical protein MJ0783
species: Methanococcus jannaschii [TaxId: 2190]

 Score = 97.8 bits (243), Expect = 1e-25
 Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 22/177 (12%)

Query: 99  CNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLNGPGLLVDVPRDKNLTAEV 158
             +SE+   +H  TH+D P H                  ++ G G  + +          
Sbjct: 30  FIVSEIIMGSHLCTHIDYPKHVGLENRI------PFKDGIIKGKGYCISLDD-------- 75

Query: 159 LESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSV 218
                +P     +L  T    +     ++              ++++ +IK VG+D  ++
Sbjct: 76  FPGNKLPAC-DILLIYT-GFSKYWGRDEYFEKIPEIPF--LDDIIKS-NIKCVGIDACTI 130

Query: 219 AAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILI 275
             F+        L  N  II      L ++    +    LPL++   + SP+RCI I
Sbjct: 131 GGFE---EHKRLLSNNILIIENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAI 184

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	276
d1r61a_	205	Unnamed protein {Bacillus stearothermophilus [TaxI	100.0
d2b0aa1	186	Hypothetical protein MJ0783 {Methanococcus jannasc	100.0

>d1r61a_ c.8.8.1 (A:) Unnamed protein {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Unnamed protein
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=5.9e-59  Score=405.52  Aligned_cols=203  Identities=29%  Similarity=0.542  Sum_probs=183.4

Q ss_pred             CCceEEEcceeccCCCCcCCCCCCccceEEeeeeeccCCceeEEeEEEEcCCcccccccccccccCcCCCCccccccCcc
Q 023836           58 GGGRIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLD  137 (276)
Q Consensus        58 ~~~kiiDLS~~i~~~mP~~p~~p~~~~~~~~~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H~~~~~~~~G~~id~i~l~  137 (276)
                      +.+|+||||+|++++||+||++|+ +....   ...++ +.+|.+.++|++|+|||+|||+||.    ++|++++++|++
T Consensus         1 ~~mkiiDLS~~i~~~mP~~pg~p~-~~~~~---~~~~~-~~~~~~~i~~~~H~GTHiDaP~H~~----~~g~~i~~~~l~   71 (205)
T d1r61a_           1 AAMKVYDVTAPIYEGMPVYKNKPE-KQPKR---TTITN-GYVTESRIDMDVHTGTHIDAPLHMV----EGGATFETIPLN   71 (205)
T ss_dssp             CCCCEEECCCCBCTTCCCGGGCGG-GSCEE---EEEEE-TTEEEEEEEEETTSSSEEECCGGGS----CSSCTTCCCCCT
T ss_pred             CCcEEEEeccCccCCCccCCCCCc-ceEEE---EEccC-CcEEEEEEEECCcCccccccHHHhc----CCCCceeeEChh
Confidence            368999999999999999999987 43221   12333 3488999999999999999999998    799999999999


Q ss_pred             cccccEEEEEcCC-CCCCCHHHHhcCCCCCCCeEEEEEecCCccccccccCCCCCcccCHHHHHHHHHcCCceEEEecCC
Q 023836          138 VLNGPGLLVDVPR-DKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYL  216 (276)
Q Consensus       138 ~~~g~~vvlDv~~-~~~It~edl~~~~i~~g~diVL~rTg~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~gik~VGiD~~  216 (276)
                      .|+|+|+|||+++ +..||++++++.+|++| |+|||||||..    .++|..++||+++|+|+||+|+ +|++||+|++
T Consensus        72 ~~~g~~vviD~~~~~~~I~~~~l~~~~i~~g-d~vl~~T~~~~----~~~~~~~~p~l~~eaa~~L~~~-~i~~iG~D~~  145 (205)
T d1r61a_          72 DLVGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNSF----EDAFHFEFIFVAEDAARYLADK-QIRGVGIDAL  145 (205)
T ss_dssp             TTEEEEEEEECTTCCSEECHHHHTTSCCCTT-CEEEEECGGGG----CCSCCTTCCEECHHHHHHHHHH-TCSEEECSSS
T ss_pred             HhCceEEEEEeecccccccHhHHhhccCCCC-cEEEEeccccC----CccccCCCCccCHHHHHHHHhC-ceEEEEEccc
Confidence            9999999999987 46799999999999886 99999999853    2348889999999999999998 9999999999


Q ss_pred             CCCCCCCChHHHHHHHhcCCcceEEcccCCCCCCCcEEEEEeccccCCCcccceeeEEEC
Q 023836          217 SVAAFDDIISAHHELLRNREIIPVEGLKLDHVPAGLYSIHCLPLRMVGAEGSPVRCILIK  276 (276)
Q Consensus       217 Svd~~~~~~p~H~~lL~~~gi~iiE~LnLd~L~~~~~~~~~~PLki~G~~GsPvR~vAi~  276 (276)
                      |+|.+++.+++|++||+ +||+|+|||||++|++++|+|+++||||+|+||||||+||++
T Consensus       146 svd~~~~~~~~H~~ll~-~gi~iiE~lnL~~l~~~~~~~~~~Plki~g~~gsP~R~vA~e  204 (205)
T d1r61a_         146 GIERAQEGHPTHKTLFS-AGVIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLFD  204 (205)
T ss_dssp             CSCCSCTTCHHHHHHHH-TTCEEEESCCCTTCCSEEEEEEEEECCBTTCSEEEEEEEEEC
T ss_pred             cccccccccHHHHHHHH-CCcEEEEeCchhcCCCCcEEEEEECccCCCCCccceEEEEEc
Confidence            99999889999999996 799999999999999999999999999999999999999986

>d2b0aa1 c.8.8.1 (A:1-186) Hypothetical protein MJ0783 {Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Putative cyclase
family: Putative cyclase
domain: Hypothetical protein MJ0783
species: Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=1.3e-47  Score=328.88  Aligned_cols=182  Identities=22%  Similarity=0.341  Sum_probs=153.8

Q ss_pred             eEEEcceeccCCCCcCCCCCCccceEEeeeeeccCCceeEEeEEEEcCCcccccccccccccCcCCCCccccccCccccc
Q 023836           61 RIFDITHQVTVDLPSYDTEGGRLGQFLRLPVSMKNGSFCNISEMKFTTHTGTHVDAPGHFFDHYFDAGFDADSLDLDVLN  140 (276)
Q Consensus        61 kiiDLS~~i~~~mP~~p~~p~~~~~~~~~~~~~~~G~~~~~~~l~~~~HtGTHvDAP~H~~~~~~~~G~~id~i~l~~~~  140 (276)
                      |+|||||++. ++| |||+|. +.  +.  ....+|  |+.+.++|++|+|||+|||.||.    ++|.++.++  +.+.
T Consensus         1 ~iiDLt~~~~-~~p-~pgdp~-~~--~~--~~~~dg--~~~~~i~~~~H~GTHiDaP~H~~----~~g~~~~~~--~~~~   65 (186)
T d2b0aa1           1 EILDLTQTLI-NFP-RPGDPE-LR--II--EKKIDG--FIVSEIIMGSHLCTHIDYPKHVG----LENRIPFKD--GIIK   65 (186)
T ss_dssp             CEEECBCCCC-SCC-CTTSCC-CE--EE--EEEETT--EEEEEEECCTTSSSEEECGGGGT----CCCCCSSGG--GCEE
T ss_pred             CEEeCCCccC-CCC-CCCCCc-cE--EE--EecCCC--eEEEEEEecCcccceeccccccC----CCCCCcccc--hhhc
Confidence            6999999996 578 899997 42  22  122333  89999999999999999999998    788887654  4589


Q ss_pred             ccEEEEEcCCCCCCCHHHHhcCCCCCCCeEEEEEecCCccccccccCCCCCcccCHHHHHHHHHcCCceEEEecCCCCCC
Q 023836          141 GPGLLVDVPRDKNLTAEVLESLNIPKGVRRVLFRTLNTDRQLMFKKFDTSYVGFMADGAKWLVENTDIKLVGVDYLSVAA  220 (276)
Q Consensus       141 g~~vvlDv~~~~~It~edl~~~~i~~g~diVL~rTg~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~gik~VGiD~~Svd~  220 (276)
                      |++++||+++        ++..+|++| |+|||||||++++ ...+|..++|++  ++|+||+++ +|++||+|++|++.
T Consensus        66 ~~~~~id~~~--------~~~~~i~~g-d~vli~TG~~~~~-~~~~y~~~~p~~--~aa~~L~~~-~i~~vG~D~~s~~~  132 (186)
T d2b0aa1          66 GKGYCISLDD--------FPGNKLPAC-DILLIYTGFSKYW-GRDEYFEKIPEI--PFLDDIIKS-NIKCVGIDACTIGG  132 (186)
T ss_dssp             EEEEEEETTT--------CSSCCCCSC-SEEEEECSGGGGT-TSGGGGGCCCCC--TTHHHHHHS-CCCEEEESSSCSSS
T ss_pred             CceEEechhc--------cccCcCCCC-cEEEEEcCchhhc-CcchhhcccchH--HHHHHHHHC-CCcEEEEcCCCccc
Confidence            9999999864        344567776 9999999998653 233477778865  799999997 99999999999874


Q ss_pred             CCCChHHHHHHHhcCCcceEEcc--cCCCCCCCcEEEEEeccccCCCcccceeeEEE
Q 023836          221 FDDIISAHHELLRNREIIPVEGL--KLDHVPAGLYSIHCLPLRMVGAEGSPVRCILI  275 (276)
Q Consensus       221 ~~~~~p~H~~lL~~~gi~iiE~L--nLd~L~~~~~~~~~~PLki~G~~GsPvR~vAi  275 (276)
                          +++|+.||+ +||+++|||  ||++|++++|+|+++||||+|+||||||+|||
T Consensus       133 ----~~~H~~ll~-~gi~iiE~L~~nL~~l~~~~~~~~~~PLki~g~~GsPvR~iAi  184 (186)
T d2b0aa1         133 ----FEEHKRLLS-NNILIIENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAI  184 (186)
T ss_dssp             ----HHHHHHHHH-TTCEEEECBCGGGGGGBTCEEEEEEEECSCCSCSEEEEEEEEE
T ss_pred             ----chhheeecc-CCEEEhhhhhhhHhhCCCCeEEEEEECCcCCCccccccEEEEE
Confidence                689999997 899999998  69999999999999999999999999999998