Citrus Sinensis ID: 023844

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
MAAAKAISQTTSCLLSKTPFALKHKSHITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQKKVIMKMIIIAANIKYISYRKNAKLGGLNWNVGSCWSSE
cccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEEccccccccccccccccccccEEEEEEEEccccccEEEEEcccccccEEEEEEccEEEEcccccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEEEEEEEEEEEEccccccEEEEEEcccccccccccHHcccccccccHHHHHHHHHHHHHEEcccccccccccEEHEEEcccccccccccccc
cHHHHHHccccHHHHccccccccccccccccccccccccccccccccccccccccEEEEEccccccccEEEEEEccccEEccccccccccccccEEEEEEEEcccccEcEEEccccccccEEEcEEccEEcEccccEEEEccccccccccccccccccccEEEcccccEEEEccccccccccEEEEEEEEEEcEEEccEEccEEEEEEcccccHHHcccHHHHHHHccHHHHHHHHHccccccccHHHccccHHHHHHHHHHHcccccccHHcccc
MAAAKAISQTTScllsktpfalkhkshitnlcfgtkgvafpskrlfscraiynpqvqiteegqpetldYRVFFVnnsgkkvspwhdiplqlgdgVFNFVVEipkessakmevatdelytpikqdikkgklryypyninwnyglfpqtwedpsfansevegafgdndpvdvVEIGERRRKIGEIlrvkplsalamidegELDWKIVAIslddpkaalvndvddvekhfpvsnilKESQKKVIMKMIIIAANIKYISYRKnaklgglnwnvgscwsse
maaakaisqttscllsKTPFALKHKSHITNLCFGTKGVAFPSKRLFSCRAIYNPqvqiteegqpETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKessakmevatdelytpikqdikkgklRYYPYNINWNYGLFPQTWEDPSFANSEVEgafgdndpvdvVEIGErrrkigeilrvkplsalaMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHfpvsnilkesqkkVIMKMIIIAANIKYISYRKNAKlgglnwnvgscwsse
MAAAKAISQTTSCLLSKTPFALKHKSHITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQkkvimkmiiiaanikyiSYRKNAKLGGLNWNVGSCWSSE
***********SCLLSKTPFALKHKSHITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKE**AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQKKVIMKMIIIAANIKYISYRKNAKLGGLNWNVGSCW***
*************************************************************GQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQKKVIMKMIIIAANIKYISYRKNAKLGGLNWNVGSCW***
**********TSCLLSKTPFALKHKSHITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQKKVIMKMIIIAANIKYISYRKNAKLGGLNWNVGSCWSSE
*****************************************************PQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQKKVIMKMIIIAANIKYISYRKNAKLGGLNWNVGSCW***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAAAKAISQTTSCLLSKTPFALKHKSHITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSNILKESQKKVIMKMIIIAANIKYISYRKNAKLGGLNWNVGSCWSSE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query276 2.2.26 [Sep-21-2011]
Q9LXC9300 Soluble inorganic pyropho yes no 0.786 0.723 0.768 5e-97
Q93Y52280 Soluble inorganic pyropho N/A no 0.663 0.653 0.606 3e-63
Q9D819289 Inorganic pyrophosphatase yes no 0.608 0.581 0.540 1e-46
P37980289 Inorganic pyrophosphatase yes no 0.608 0.581 0.545 2e-46
Q4R543289 Inorganic pyrophosphatase N/A no 0.608 0.581 0.540 1e-45
Q15181289 Inorganic pyrophosphatase yes no 0.608 0.581 0.540 1e-45
Q5R8T6289 Inorganic pyrophosphatase yes no 0.608 0.581 0.534 6e-45
Q9H2U2334 Inorganic pyrophosphatase no no 0.608 0.502 0.471 3e-43
Q757J8287 Inorganic pyrophosphatase yes no 0.597 0.574 0.522 8e-43
Q6FRB7287 Inorganic pyrophosphatase yes no 0.597 0.574 0.517 7e-42
>sp|Q9LXC9|IPYR1_ARATH Soluble inorganic pyrophosphatase 1, chloroplastic OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1 Back     alignment and function desciption
 Score =  353 bits (907), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 169/220 (76%), Positives = 185/220 (84%), Gaps = 3/220 (1%)

Query: 12  SCLLSKTPFALKHKSH---ITNLCFGTKGVAFPSKRLFSCRAIYNPQVQITEEGQPETLD 68
           SC L+K  F L  K        LCF  + +   SKR FSC AIYNPQV++ EEG  E+LD
Sbjct: 18  SCFLAKQAFTLPAKKSCGGFGGLCFSRRALVLKSKRPFSCSAIYNPQVKVQEEGPAESLD 77

Query: 69  YRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKG 128
           YRVFF++ SGKKVSPWHDIPL LGDGVFNF+VEIPKES AKMEVATDE +TPIKQD KKG
Sbjct: 78  YRVFFLDGSGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKG 137

Query: 129 KLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKP 188
           KLRYYPYNINWNYGL PQTWEDPS ANSEVEG FGDNDPVDVVEIGE +RKIG+IL++KP
Sbjct: 138 KLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILKIKP 197

Query: 189 LSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFP 228
           L+ALAMIDEGELDWKIVAISLDDPKA LVNDV+DVEKHFP
Sbjct: 198 LAALAMIDEGELDWKIVAISLDDPKAHLVNDVEDVEKHFP 237

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|Q93Y52|IPYR1_CHLRE Soluble inorganic pyrophosphatase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ppa1 PE=1 SV=1 Back     alignment and function description
>sp|Q9D819|IPYR_MOUSE Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 PE=1 SV=1 Back     alignment and function description
>sp|P37980|IPYR_BOVIN Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE=1 SV=2 Back     alignment and function description
>sp|Q4R543|IPYR_MACFA Inorganic pyrophosphatase OS=Macaca fascicularis GN=PPA1 PE=2 SV=2 Back     alignment and function description
>sp|Q15181|IPYR_HUMAN Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2 Back     alignment and function description
>sp|Q5R8T6|IPYR_PONAB Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 PE=2 SV=1 Back     alignment and function description
>sp|Q9H2U2|IPYR2_HUMAN Inorganic pyrophosphatase 2, mitochondrial OS=Homo sapiens GN=PPA2 PE=1 SV=2 Back     alignment and function description
>sp|Q757J8|IPYR_ASHGO Inorganic pyrophosphatase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=IPP1 PE=3 SV=1 Back     alignment and function description
>sp|Q6FRB7|IPYR_CANGA Inorganic pyrophosphatase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=IPP1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query276
224103823298 predicted protein [Populus trichocarpa] 0.822 0.761 0.775 4e-99
255554527304 inorganic pyrophosphatase, putative [Ric 0.786 0.713 0.781 1e-98
363806832288 uncharacterized protein LOC100787109 [Gl 0.804 0.770 0.757 4e-97
449438258296 PREDICTED: soluble inorganic pyrophospha 0.826 0.770 0.738 9e-97
224056325296 predicted protein [Populus trichocarpa] 0.815 0.760 0.75 1e-96
388505614291 unknown [Lotus japonicus] 0.815 0.773 0.753 3e-96
15242465300 soluble inorganic pyrophosphatase 1 [Ara 0.786 0.723 0.768 3e-95
356549471288 PREDICTED: soluble inorganic pyrophospha 0.804 0.770 0.744 3e-95
21592878300 inorganic pyrophosphatase-like protein [ 0.786 0.723 0.768 9e-95
297811059299 inorganic pyrophosphatase family protein 0.782 0.722 0.763 2e-94
>gi|224103823|ref|XP_002313207.1| predicted protein [Populus trichocarpa] gi|222849615|gb|EEE87162.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  367 bits (941), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 183/236 (77%), Positives = 201/236 (85%), Gaps = 9/236 (3%)

Query: 1   MAAAKAIS----QTTSCLLSKTPF-ALKHKSHI--TNLCFGTKGVAFPSKRLFSCRAIYN 53
           MA A+ +S     T SCLL K PF +L  K+     NL F T      SKRLFSC++IYN
Sbjct: 1   MATARVMSAATNTTASCLLLKRPFFSLNQKAPYFNNNLRFNTTTKRV-SKRLFSCKSIYN 59

Query: 54  PQVQITEEGQPETLDYRVF-FVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEV 112
           P VQI EEGQPETLDYRV+ F++NSGKKVSPWHDIPL LGDG FN+VVEIPKESSAKME+
Sbjct: 60  PDVQIKEEGQPETLDYRVYYFLDNSGKKVSPWHDIPLHLGDGAFNYVVEIPKESSAKMEI 119

Query: 113 ATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVE 172
           ATDE +TPIKQD KKGKLRYYPYNINWNYGL PQTWEDPSFAN+EVEGA+GDNDPVDVVE
Sbjct: 120 ATDEQFTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSFANAEVEGAYGDNDPVDVVE 179

Query: 173 IGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFP 228
           IGERR KIGEIL+VKPL+ALAMIDEGELDWKIVAISLDDP+A+LVNDVDDVEKHFP
Sbjct: 180 IGERRGKIGEILKVKPLAALAMIDEGELDWKIVAISLDDPRASLVNDVDDVEKHFP 235

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255554527|ref|XP_002518302.1| inorganic pyrophosphatase, putative [Ricinus communis] gi|223542522|gb|EEF44062.1| inorganic pyrophosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|363806832|ref|NP_001242545.1| uncharacterized protein LOC100787109 [Glycine max] gi|255640293|gb|ACU20436.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449438258|ref|XP_004136906.1| PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Cucumis sativus] gi|449527824|ref|XP_004170909.1| PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224056325|ref|XP_002298803.1| predicted protein [Populus trichocarpa] gi|118485996|gb|ABK94842.1| unknown [Populus trichocarpa] gi|222846061|gb|EEE83608.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388505614|gb|AFK40873.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|15242465|ref|NP_196527.1| soluble inorganic pyrophosphatase 1 [Arabidopsis thaliana] gi|75264322|sp|Q9LXC9.1|IPYR1_ARATH RecName: Full=Soluble inorganic pyrophosphatase 1, chloroplastic; AltName: Full=Inorganic pyrophosphatase 1; AltName: Full=Pyrophosphate phospho-hydrolase 1; Short=PPase 1; Flags: Precursor gi|7671424|emb|CAB89365.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] gi|9758993|dbj|BAB09520.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] gi|12057177|emb|CAC19853.1| inorganic pyrophosphatase [Arabidopsis thaliana] gi|15028285|gb|AAK76619.1| putative inorganic pyrophosphatase [Arabidopsis thaliana] gi|19310711|gb|AAL85086.1| putative inorganic pyrophosphatase [Arabidopsis thaliana] gi|45331391|gb|AAS57950.1| chloroplast inorganic pyrophosphatase [Arabidopsis thaliana] gi|332004038|gb|AED91421.1| soluble inorganic pyrophosphatase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356549471|ref|XP_003543117.1| PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|21592878|gb|AAM64828.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297811059|ref|XP_002873413.1| inorganic pyrophosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297319250|gb|EFH49672.1| inorganic pyrophosphatase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query276
TAIR|locus:2144766300 PPa6 "pyrophosphorylase 6" [Ar 0.826 0.76 0.757 2.1e-93
UNIPROTKB|Q93Y52280 ppa1 "Soluble inorganic pyroph 0.612 0.603 0.654 5e-60
UNIPROTKB|E1C6X1332 PPA2 "Uncharacterized protein" 0.481 0.400 0.553 4.2e-49
UNIPROTKB|F1SUE3289 PPA1 "Uncharacterized protein" 0.608 0.581 0.545 8.8e-47
RGD|1589773331 Ppa1 "pyrophosphatase (inorgan 0.608 0.507 0.545 1.4e-46
UNIPROTKB|P37980289 PPA1 "Inorganic pyrophosphatas 0.608 0.581 0.545 2.3e-46
MGI|MGI:97831289 Ppa1 "pyrophosphatase (inorgan 0.608 0.581 0.540 2.3e-46
UNIPROTKB|F1PIJ6284 PPA1 "Uncharacterized protein" 0.612 0.595 0.537 3.8e-46
UNIPROTKB|Q15181289 PPA1 "Inorganic pyrophosphatas 0.612 0.584 0.545 7.9e-46
UNIPROTKB|F1NT28306 PPA1 "Uncharacterized protein" 0.615 0.555 0.511 4.4e-45
TAIR|locus:2144766 PPa6 "pyrophosphorylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 175/231 (75%), Positives = 194/231 (83%)

Query:     1 MAAAKAISQTTSCLLSKTPFALKHKSH---ITNLCFGTKGVAFPSKRLFSCRAIYNPQVQ 57
             + AA A++QTTSC L+K  F L  K        LCF  + +   SKR FSC AIYNPQV+
Sbjct:     7 LTAATAVTQTTSCFLAKQAFTLPAKKSCGGFGGLCFSRRALVLKSKRPFSCSAIYNPQVK 66

Query:    58 ITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDEL 117
             + EEG  E+LDYRVFF++ SGKKVSPWHDIPL LGDGVFNF+VEIPKES AKMEVATDE 
Sbjct:    67 VQEEGPAESLDYRVFFLDGSGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDED 126

Query:   118 YTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERR 177
             +TPIKQD KKGKLRYYPYNINWNYGL PQTWEDPS ANSEVEG FGDNDPVDVVEIGE +
Sbjct:   127 FTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQ 186

Query:   178 RKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFP 228
             RKIG+IL++KPL+ALAMIDEGELDWKIVAISLDDPKA LVNDV+DVEKHFP
Sbjct:   187 RKIGDILKIKPLAALAMIDEGELDWKIVAISLDDPKAHLVNDVEDVEKHFP 237
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004427 "inorganic diphosphatase activity" evidence=IEA;IGI;IDA
GO:0006796 "phosphate-containing compound metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016020 "membrane" evidence=ISS
GO:0016462 "pyrophosphatase activity" evidence=ISS
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0009579 "thylakoid" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP;RCA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005829 "cytosol" evidence=RCA
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0009536 "plastid" evidence=IDA
UNIPROTKB|Q93Y52 ppa1 "Soluble inorganic pyrophosphatase 1, chloroplastic" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|E1C6X1 PPA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SUE3 PPA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1589773 Ppa1 "pyrophosphatase (inorganic) 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P37980 PPA1 "Inorganic pyrophosphatase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:97831 Ppa1 "pyrophosphatase (inorganic) 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PIJ6 PPA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q15181 PPA1 "Inorganic pyrophosphatase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NT28 PPA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LXC9IPYR1_ARATH3, ., 6, ., 1, ., 10.76810.78620.7233yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1.10.991
3rd Layer3.6.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query276
PLN02707267 PLN02707, PLN02707, Soluble inorganic pyrophosphat 1e-132
cd00412155 cd00412, pyrophosphatase, Inorganic pyrophosphatas 5e-47
pfam00719156 pfam00719, Pyrophosphatase, Inorganic pyrophosphat 2e-43
COG0221171 COG0221, Ppa, Inorganic pyrophosphatase [Energy pr 2e-31
PLN02373188 PLN02373, PLN02373, soluble inorganic pyrophosphat 5e-17
PRK01250176 PRK01250, PRK01250, inorganic pyrophosphatase; Pro 6e-11
PRK00642205 PRK00642, PRK00642, inorganic pyrophosphatase; Pro 1e-09
PRK02230184 PRK02230, PRK02230, inorganic pyrophosphatase; Pro 1e-07
>gnl|CDD|178309 PLN02707, PLN02707, Soluble inorganic pyrophosphatase Back     alignment and domain information 
 Score =  375 bits (965), Expect = e-132
 Identities = 150/192 (78%), Positives = 162/192 (84%)

Query: 37  GVAFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVF 96
                S+RLFSC +  N    + EEG+ ETLDYRVFF + SGKKVSPWHDIPL  GDG F
Sbjct: 13  ARPPVSRRLFSCASAVNAAYAVEEEGEAETLDYRVFFSDGSGKKVSPWHDIPLHAGDGTF 72

Query: 97  NFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANS 156
           NFVVEIPKE+SAKMEVATDE +TPIKQD KKGKLR YPYNINWNYGL PQTWEDP+ AN 
Sbjct: 73  NFVVEIPKETSAKMEVATDEPFTPIKQDTKKGKLRDYPYNINWNYGLLPQTWEDPTHANP 132

Query: 157 EVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAAL 216
           EVEGAFGDNDPVDVVEIGER  KIGE+L+VKPL  LAMIDEGELDWK+VAIS DDPKA+L
Sbjct: 133 EVEGAFGDNDPVDVVEIGERAAKIGEVLKVKPLGVLAMIDEGELDWKVVAISADDPKASL 192

Query: 217 VNDVDDVEKHFP 228
           VNDVDDVEKHFP
Sbjct: 193 VNDVDDVEKHFP 204

Length = 267
>gnl|CDD|238239 cd00412, pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|189686 pfam00719, Pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|223299 COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|178001 PLN02373, PLN02373, soluble inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|179262 PRK01250, PRK01250, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179080 PRK00642, PRK00642, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179388 PRK02230, PRK02230, inorganic pyrophosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 276
PLN02707267 Soluble inorganic pyrophosphatase 100.0
KOG1626279 consensus Inorganic pyrophosphatase/Nucleosome rem 100.0
PRK00642205 inorganic pyrophosphatase; Provisional 100.0
PLN02373188 soluble inorganic pyrophosphatase 100.0
PRK01250176 inorganic pyrophosphatase; Provisional 100.0
cd00412155 pyrophosphatase Inorganic pyrophosphatase. These e 100.0
PF00719156 Pyrophosphatase: Inorganic pyrophosphatase; InterP 100.0
COG0221171 Ppa Inorganic pyrophosphatase [Energy production a 100.0
PRK02230184 inorganic pyrophosphatase; Provisional 100.0
>PLN02707 Soluble inorganic pyrophosphatase Back     alignment and domain information 
Probab=100.00  E-value=5.2e-74  Score=527.72  Aligned_cols=202  Identities=75%  Similarity=1.189  Sum_probs=194.1

Q ss_pred             eecccccceecceeccceeEEEecCCCCcceEEEEEcCCCCcCCCCcCCCCCCCCCeeEEEEEeCCCCCceEEEecCCCC
Q 023844           39 AFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELY  118 (276)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~G~~~t~~yrv~f~~~~g~~iSpwHDIPl~~~~~~vn~VVEIPrgS~aK~Ei~~~e~~  118 (276)
                      ...++|.++|.+++.+.|+++++|+++|++||+||++.+|+++|||||||++..+++|||||||||||++||||++++++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~G~~~t~~~r~~~~~~~g~~~spwHdIpl~~~~~~vn~VVEIPrgs~~KyEidk~~~~   94 (267)
T PLN02707         15 PPVSRRLFSCASAVNAAYAVEEEGEAETLDYRVFFSDGSGKKVSPWHDIPLHAGDGTFNFVVEIPKETSAKMEVATDEPF   94 (267)
T ss_pred             ccccccceeehhhhccceeEEeecCCCCcceEEEEECCCCCccCchhcCCCCCCCCEEEEEEEECCCCceeEEECccCCC
Confidence            33578999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCC
Q 023844          119 TPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEG  198 (276)
Q Consensus       119 npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeG  198 (276)
                      |||+||+++|++|+||++|||||||||||||||++.+++++|+.||||||||||||+.++.+|+|++|||||+|+|||+|
T Consensus        95 npi~qD~~~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~~l~gDgDPLDVlvi~~~~~~pG~Vv~vR~IGvL~miDeG  174 (267)
T PLN02707         95 TPIKQDTKKGKLRDYPYNINWNYGLLPQTWEDPTHANPEVEGAFGDNDPVDVVEIGERAAKIGEVLKVKPLGVLAMIDEG  174 (267)
T ss_pred             CCEEEeeecCceEECCCcCccccccccccccCcccccccccccCCCCCccEEEEecCCCcCCccEEEEEEeEEEEEEeCC
Confidence            99999999999999999999999999999999999999977799999999999999999999999999999999999999


Q ss_pred             CCceEEEEEeCCCCcCCCCCCcccccccCCChh--------hHHhhhccc
Q 023844          199 ELDWKIVAISLDDPKAALVNDVDDVEKHFPVSN--------ILKESQKKV  240 (276)
Q Consensus       199 E~DwKIIaV~~~DP~~~~IndI~DVek~~pg~~--------~l~~~~~~~  240 (276)
                      |+|||||||+++||++++||||+||++++||+.        .||..++|.
T Consensus       175 E~D~KIIaV~~~Dp~~~~i~di~Dv~~~~pg~l~~I~~fF~~YK~~eGK~  224 (267)
T PLN02707        175 ELDWKVVAISADDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKP  224 (267)
T ss_pred             CCCCEEEEEECCCCcccccCChhHhhhhhhhHHHHHHHHHHHhcCCCCCc
Confidence            999999999999999999999999999999885        788888665

>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] Back     alignment and domain information
>PRK00642 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PLN02373 soluble inorganic pyrophosphatase Back     alignment and domain information
>PRK01250 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>cd00412 pyrophosphatase Inorganic pyrophosphatase Back     alignment and domain information
>PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3 Back     alignment and domain information
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>PRK02230 inorganic pyrophosphatase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query276
1wgi_A286 Structure Of Inorganic Pyrophosphatase Length = 286 3e-41
1huj_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 3e-41
1huk_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 3e-41
1m38_A287 Structure Of Inorganic Pyrophosphatase Length = 287 3e-41
8prk_A287 The R78k And D117e Active Site Variants Of Saccharo 7e-41
2ik0_A286 Yeast Inorganic Pyrophosphatase Variant E48d With M 7e-41
2ik1_A286 Yeast Inorganic Pyrophosphatase Variant Y93f With M 8e-41
117e_A286 The R78k And D117e Active Site Variants Of Saccharo 9e-41
2ik6_A286 Yeast Inorganic Pyrophosphatase Variant D120e With 9e-41
2ik9_A286 Yeast Inorganic Pyrophosphatase Variant D152e With 9e-41
2ik2_A286 Yeast Inorganic Pyrophosphatase Variant D115e With 9e-41
2ik7_A286 Yeast Inorganic Pyrophosphatase Variant D120n With 9e-41
1ypp_A286 Acid Anhydride Hydrolase Length = 286 1e-40
1pyp_A285 X-Ray Diffraction Study Of Inorganic Pyrophosphatas 3e-38
1ude_A195 Crystal Structure Of The Inorganic Pyrophosphatase 1e-09
1twl_A186 Inorganic Pyrophosphatase From Pyrococcus Furiosus 2e-09
1qez_A173 Sulfolobus Acidocaldarius Inorganic Pyrophosphatase 3e-09
3q46_A178 Magnesium Activated Inorganic Pyrophosphatase From 6e-09
3i98_A178 X-Ray Crystallographic Structure Of Inorganic Pyrop 8e-09
3d63_A196 Crystal Structure Of Inorganic Pyrophosphatase From 8e-08
3r6e_A178 The Structure Of Thermococcus Thioreducens' Inorgan 2e-07
2bqx_A173 Inorganic Pyrophosphatase From The Pathogenic Bacte 5e-07
1ygz_A173 Crystal Structure Of Inorganic Pyrophosphatase From 8e-06
3lo0_A193 Crystal Structure Of Inorganic Pyrophosphatase From 2e-05
3ld3_A199 Crystal Structure Of Inorganic Phosphatase From Ana 9e-05
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 286 Back     alignment and structure 
Iteration: 1

 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/174 (48%), Positives = 122/174 (70%), Gaps = 9/174 (5%)
Query: 62  GQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYT 119
           G   TL+Y+V+ +   GK VS +HDIPL     + +FN VVEIP+ ++AK+E+  +E   
Sbjct: 8   GAKNTLEYKVY-IEKDGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLN 66
Query: 120 PIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIG 174
           PI QD KKGKLR+    +P++    NYG FPQTWEDP+ ++ E + A GDNDP+DV+EIG
Sbjct: 67  PIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK-AVGDNDPIDVLEIG 125
Query: 175 ERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFP 228
           E     G++ +VK L  +A++DEGE DWK++AI ++DP A  +ND++DVEK+FP
Sbjct: 126 ETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFP 179
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 287 Back     alignment and structure
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 287 Back     alignment and structure
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 286 Back     alignment and structure
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase Length = 286 Back     alignment and structure
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From Baker,S Yeast At The 3 Angstroms Resolution (Russian) Length = 285 Back     alignment and structure
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3 Length = 195 Back     alignment and structure
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus Pfu-264096-001 Length = 186 Back     alignment and structure
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An Archael Pyrophosphatase. Length = 173 Back     alignment and structure
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From Thermococcus Thioreducens Bound To Hydrolyzed Product At 0.99 Angstrom Resolution Length = 178 Back     alignment and structure
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic Pyrophosphatase At 298k From Archaeon Thermococcus Thioreducens Length = 178 Back     alignment and structure
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Length = 196 Back     alignment and structure
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic Pyrophosphatase Bound To Sulfate Length = 178 Back     alignment and structure
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium Helicobacter Pylori-Kinetic And Structural Properties Length = 173 Back     alignment and structure
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Helicobacter Pylori Length = 173 Back     alignment and structure
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Ehrlichia Chaffeensis Length = 193 Back     alignment and structure
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma Phagocytophilum At 1.75a Resolution Length = 199 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query276
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 6e-71
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 2e-23
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 6e-22
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 8e-22
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 4e-21
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 8e-21
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 3e-20
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 7e-20
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 8e-20
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 9e-20
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 1e-18
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 1e-17
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 5e-04
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Length = 286 Back     alignment and structure
 Score =  219 bits (559), Expect = 6e-71
 Identities = 85/179 (47%), Positives = 122/179 (68%), Gaps = 9/179 (5%)

Query: 57  QITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVAT 114
              + G   TL+Y+V+   + GK VS +HDIPL     + +FN VVEIP+ ++AK+E+  
Sbjct: 3   TTRQIGAKNTLEYKVYIEKD-GKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITK 61

Query: 115 DELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVD 169
           +E   PI QD KKGKLR+    +P++    NYG FPQTWEDP+ ++ E   A GDNDP+D
Sbjct: 62  EETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPET-KAVGDNDPID 120

Query: 170 VVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFP 228
           V+EIGE     G++ +VK L  +A++DEGE DWK++AI ++DP A  +ND++DVEK+FP
Sbjct: 121 VLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFP 179
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Length = 178 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Length = 172 Back     alignment and structure
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Length = 174 Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Length = 173 Back     alignment and structure
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Length = 196 Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Length = 199 Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Length = 173 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Length = 173 Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Length = 175 Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Length = 197 Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} Length = 178 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query276
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 100.0
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 100.0
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 100.0
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 100.0
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 100.0
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 100.0
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 100.0
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 100.0
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 100.0
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 100.0
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 100.0
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 100.0
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Back     alignment and structure
Probab=100.00  E-value=2.7e-66  Score=479.20  Aligned_cols=184  Identities=48%  Similarity=0.831  Sum_probs=174.2

Q ss_pred             ceeEEEecCCCCcceEEEEEcCCCCcCCCCcCCCCCCC--CCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEE
Q 023844           55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY  132 (276)
Q Consensus        55 ~~~~~~~G~~~t~~yrv~f~~~~g~~iSpwHDIPl~~~--~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~  132 (276)
                      +|+++++|+++|++||+||++ +|+++|||||||++.+  ++.|||||||||||++|||+++++++|||+||.++|++|+
T Consensus         1 ~y~~~~~G~~~t~~~r~~~~~-~g~~~sp~hdIp~~~~~~~~~~nvVIEIP~gs~~KyEidk~~~~nPIkqd~k~G~lr~   79 (286)
T 1e9g_A            1 TYTTRQIGAKNTLEYKVYIEK-DGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRF   79 (286)
T ss_dssp             CEEEEEEEETTSTTCEEEEEE-TTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECB
T ss_pred             CceeeeecCCCCcceEEEEEe-CCeecCchhhCCCCCCCCCCEEEEEEEECCCCCeEEEEccCCCCCcchhhhcCCcEEE
Confidence            389999999999999999987 6999999999999865  3799999999999999999999999999999999999997


Q ss_pred             ----ecC-cccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEE
Q 023844          133 ----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAI  207 (276)
Q Consensus       133 ----yP~-~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV  207 (276)
                          ||+ .|||||||||||||||++.+++ ||+.||||||||||||++++.+|++++|||||+|+|+|+||+|||||||
T Consensus        80 dr~l~~~~~YP~NYGfIPqTledp~~~~~~-t~~~gDgDPLDVlvi~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaV  158 (286)
T 1e9g_A           80 VRNCFPHHGYIHNYGAFPQTWEDPNVSHPE-TKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAI  158 (286)
T ss_dssp             CCEETTCCSCSSEEEECSSCCCCTTSEETT-TTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEE
T ss_pred             EeccCCCCCCccCcccCcccccCccccccc-CCCCCCCCceEEEEecCccCCCccEEEEEEeEEEEeccCCCCCceEEEE
Confidence                554 6999999999999999999998 8999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCcCCCCCCcccccccCCChh--------hHHhhhccc
Q 023844          208 SLDDPKAALVNDVDDVEKHFPVSN--------ILKESQKKV  240 (276)
Q Consensus       208 ~~~DP~~~~IndI~DVek~~pg~~--------~l~~~~~~~  240 (276)
                      +++||++++|||++||++++|++.        .||.+++|.
T Consensus       159 ~~~Dp~~~~i~di~Dl~~~~p~~l~~i~~fF~~YK~leGK~  199 (286)
T 1e9g_A          159 DINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKP  199 (286)
T ss_dssp             ETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCC
T ss_pred             eCCCcccccCCCHHHhchhhHHHHHHHHHHHHHhcCcCCCC
Confidence            999999999999999999999985        788888665
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Back     alignment and structure
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Back     alignment and structure
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 276
d1e9ga_284 b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's y 3e-57
d1twla_173 b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcu 6e-31
d2prda_174 b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus t 4e-28
d1qeza_170 b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon 2e-26
d1i40a_175 b.40.5.1 (A:) Inorganic pyrophosphatase {Escherich 2e-22
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 284 Back     information, alignment and structure

class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  182 bits (464), Expect = 3e-57
 Identities = 85/186 (45%), Positives = 121/186 (65%), Gaps = 11/186 (5%)

Query: 57  QITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVAT 114
              + G   TL+Y+V+     GK VS +HDIPL     + +FN VVEIP+ ++AK+E+  
Sbjct: 3   TTRQIGAKNTLEYKVYI-EKDGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITK 61

Query: 115 DELYTPIKQDIKKGKLRYY-----PYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVD 169
           +E   PI QD KKGKLR+       +    NYG FPQTWEDP+ ++ E   A GDNDP+D
Sbjct: 62  EETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPET-KAVGDNDPID 120

Query: 170 VVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPV 229
           V+EIGE     G++ +VK L  +A++DEGE DWK++AI ++DP A  +ND++DVEK+FP 
Sbjct: 121 VLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFP- 179

Query: 230 SNILKE 235
             +L+ 
Sbjct: 180 -GLLRA 184
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 173 Back     information, alignment and structure
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Length = 174 Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 170 Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Length = 175 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query276
d1e9ga_284 Inorganic pyrophosphatase {Baker's yeast (Saccharo 100.0
d1twla_173 Inorganic pyrophosphatase {Pyrococcus furiosus [Ta 100.0
d2prda_174 Inorganic pyrophosphatase {Thermus thermophilus [T 100.0
d1qeza_170 Inorganic pyrophosphatase {Archaeon Sulfolobus aci 100.0
d1i40a_175 Inorganic pyrophosphatase {Escherichia coli [TaxId 100.0
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.2e-69  Score=496.00  Aligned_cols=187  Identities=47%  Similarity=0.810  Sum_probs=175.5

Q ss_pred             ceeEEEecCCCCcceEEEEEcCCCCcCCCCcCCCCCC--CCCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEE
Q 023844           55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQL--GDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY  132 (276)
Q Consensus        55 ~~~~~~~G~~~t~~yrv~f~~~~g~~iSpwHDIPl~~--~~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~  132 (276)
                      +|+++++|+++|++||+||. .+|+++||||||||++  .+++|||||||||||++||||++++++|||+||.++|++|+
T Consensus         1 sy~~~~~G~~~t~~yr~~~~-~~g~~iSp~HDIPl~~d~~~~~~nvVVEIPrgsn~KyEi~ke~~~npIkqD~k~G~lr~   79 (284)
T d1e9ga_           1 TYTTRQIGAKNTLEYKVYIE-KDGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRF   79 (284)
T ss_dssp             CEEEEEEEETTSTTCEEEEE-ETTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECB
T ss_pred             CceeeEccCCCCcceeEEEc-cCCcccCccccCCCCCCCCCCEEEEEEEeCCCCCeeEEECcCCCCCceeeeccCCCEEE
Confidence            58999999999999999996 5899999999999985  46899999999999999999999999999999999999997


Q ss_pred             ----ecC-cccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEE
Q 023844          133 ----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAI  207 (276)
Q Consensus       133 ----yP~-~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV  207 (276)
                          ||+ .|||||||||||||||++.+++ +++.||||||||||||+.++.+|+|++|||||+|+|+|+||+|||||||
T Consensus        80 ~r~l~~~~~YP~NYGfIPqTwedp~~~~~~-~~~~GDgDPLDVlvi~~~~~~~G~Vv~vk~lGvL~miDeGE~D~KIIaV  158 (284)
T d1e9ga_          80 VRNCFPHHGYIHNYGAFPQTWEDPNVSHPE-TKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAI  158 (284)
T ss_dssp             CCEETTCCSCSSEEEECSSCCCCTTSEETT-TTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEE
T ss_pred             EeccCCCCCCCcccccCcccccCccccccc-ccccCCCCCeeEEEecccccccceEEEEEEEEEEEeccCCCccceEEEe
Confidence                455 6999999999999999999998 8999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCcCCCCCCcccccccCCChh--------hHHhhhccceeE
Q 023844          208 SLDDPKAALVNDVDDVEKHFPVSN--------ILKESQKKVIMK  243 (276)
Q Consensus       208 ~~~DP~~~~IndI~DVek~~pg~~--------~l~~~~~~~~~~  243 (276)
                      +++||+++++|||+||++++||+.        .||..++|..-+
T Consensus       159 ~~~Dp~~~~~ndI~Dv~~~~p~~l~~i~~fF~~YK~~eGK~~n~  202 (284)
T d1e9ga_         159 DINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQ  202 (284)
T ss_dssp             ETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCCCCE
T ss_pred             ecCCccccccCChhhhhhhCHHHHHHHHHHHHHhcCCCCCceeE
Confidence            999999999999999999999984        788888765443
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure