Citrus Sinensis ID: 023851
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 276 | ||||||
| 224069880 | 275 | predicted protein [Populus trichocarpa] | 0.974 | 0.978 | 0.745 | 1e-113 | |
| 255580495 | 408 | conserved hypothetical protein [Ricinus | 0.963 | 0.651 | 0.722 | 1e-109 | |
| 225467702 | 380 | PREDICTED: uncharacterized protein LOC10 | 0.945 | 0.686 | 0.660 | 1e-98 | |
| 356558985 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.942 | 0.670 | 0.651 | 1e-93 | |
| 449464112 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.945 | 0.672 | 0.638 | 2e-92 | |
| 356504408 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.942 | 0.661 | 0.636 | 2e-90 | |
| 357513325 | 372 | hypothetical protein MTR_8g012420 [Medic | 0.956 | 0.709 | 0.614 | 1e-89 | |
| 356566244 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.887 | 0.694 | 0.580 | 3e-83 | |
| 449527687 | 251 | PREDICTED: uncharacterized protein LOC10 | 0.884 | 0.972 | 0.626 | 8e-83 | |
| 297833518 | 371 | hypothetical protein ARALYDRAFT_896892 [ | 0.858 | 0.638 | 0.595 | 4e-82 |
| >gi|224069880|ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 231/271 (85%), Gaps = 2/271 (0%)
Query: 7 FVGKIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELE 66
+ +IA+LKEHECQ AVEDVMYML+LYKFSEIRV LVPKLSRCIYNGRLEI PSKDWELE
Sbjct: 6 MIQRIAELKEHECQVAVEDVMYMLVLYKFSEIRVPLVPKLSRCIYNGRLEIRPSKDWELE 65
Query: 67 SIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASL 126
SIH FEVLEM+REH+STVIGL+AN SV DSWATTE+QR RLGRVY ASILYGYFLKSASL
Sbjct: 66 SIHSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRLGRVYAASILYGYFLKSASL 125
Query: 127 RYYLEECLASAHQDLHLTHRNSLQFPEAW-SYGLKQNQVVGCVNNTQSISLGRGTNGHEL 185
R++LE CL HQD+HL HR++LQFPE+ SYGL N V G ++N QS S G N +
Sbjct: 126 RHHLEWCLVLPHQDIHLGHRSTLQFPESLPSYGL-TNLVFGHISNKQSTSQGTRLNRPKS 184
Query: 186 KQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSS 245
+ E LKCY+MGFD ETLQRCAKL+S+EAVNL+EKHSCALFGD +TG+L+ DEVILTSFSS
Sbjct: 185 EHEKLKCYMMGFDSETLQRCAKLKSKEAVNLIEKHSCALFGDEKTGVLENDEVILTSFSS 244
Query: 246 LKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 276
LKRLVLEA+AFG FLWD EE ++VYKLK+N
Sbjct: 245 LKRLVLEAVAFGCFLWDTEEDVNSVYKLKDN 275
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255580495|ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis] gi|223529318|gb|EEF31286.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225467702|ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356558985|ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449464112|ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356504408|ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357513325|ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula] gi|355520973|gb|AET01427.1| hypothetical protein MTR_8g012420 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356566244|ref|XP_003551344.1| PREDICTED: uncharacterized protein LOC100794032 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449527687|ref|XP_004170841.1| PREDICTED: uncharacterized protein LOC101230760 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297833518|ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 276 | ||||||
| TAIR|locus:2079626 | 368 | AT3G07310 "AT3G07310" [Arabido | 0.467 | 0.350 | 0.720 | 9.6e-76 | |
| TAIR|locus:2152516 | 344 | AT5G48590 "AT5G48590" [Arabido | 0.463 | 0.372 | 0.720 | 1.8e-70 | |
| TAIR|locus:2088490 | 427 | AT3G17800 "AT3G17800" [Arabido | 0.934 | 0.604 | 0.398 | 1.9e-44 | |
| TAIR|locus:2198055 | 423 | AT1G48450 "AT1G48450" [Arabido | 0.938 | 0.612 | 0.402 | 3.1e-44 | |
| TAIR|locus:2031760 | 406 | AT1G32160 "AT1G32160" [Arabido | 0.927 | 0.630 | 0.335 | 6.5e-35 |
| TAIR|locus:2079626 AT3G07310 "AT3G07310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 495 (179.3 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 93/129 (72%), Positives = 110/129 (85%)
Query: 10 KIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIH 69
+IA+LKE C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRLEIWPSKDWELESI+
Sbjct: 120 RIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIY 179
Query: 70 EFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYY 129
+ LE+I+EH+S VIGLR N VTD+WATT+IQ+L L +VY ASILYGYFLKSASLR+
Sbjct: 180 SCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQ 239
Query: 130 LEECLASAH 138
LE L+ H
Sbjct: 240 LECSLSDIH 248
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| TAIR|locus:2152516 AT5G48590 "AT5G48590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088490 AT3G17800 "AT3G17800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2198055 AT1G48450 "AT1G48450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031760 AT1G32160 "AT1G32160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 276 | |||
| pfam05542 | 85 | pfam05542, DUF760, Protein of unknown function (DU | 8e-15 |
| >gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760) | Back alignment and domain information |
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Score = 67.6 bits (166), Expect = 8e-15
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 64 ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 123
L EVLE +R ++S ++G T + R L ++ +S++ GYFL++
Sbjct: 17 RLADSASPEVLEAMRRNVSGLLGSL---PSDHFEVTIQTSRENLAQLLASSMMTGYFLRN 73
Query: 124 ASLRYYLEECL 134
A R LE L
Sbjct: 74 AEQRLELERSL 84
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This family contains several uncharacterized plant proteins. Length = 85 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 276 | |||
| PF05542 | 86 | DUF760: Protein of unknown function (DUF760); Inte | 99.94 | |
| PF05542 | 86 | DUF760: Protein of unknown function (DUF760); Inte | 97.77 |
| >PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins | Back alignment and domain information |
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Probab=99.94 E-value=3.7e-27 Score=184.51 Aligned_cols=84 Identities=29% Similarity=0.400 Sum_probs=78.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCcccccCCccccCCcchhhhhccCchHHHHHHHHHHHHhh
Q 023851 6 VFVGKIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVI 85 (276)
Q Consensus 6 vLyrRIAevKe~Err~alEdImY~lIv~KF~~~~V~mvP~ls~~~~~Grl~~wp~~~~~Le~ihS~Ev~emI~~hl~~vL 85 (276)
+||++|++++. |+..+++| +|||||+|+|++||.++|
T Consensus 2 ~L~~yi~~l~p-e~~~~l~~------------------------------------------~~s~ev~e~m~~~v~~ll 38 (86)
T PF05542_consen 2 DLLQYIQSLKP-ERIQQLSE------------------------------------------PASPEVLEAMKQHVSGLL 38 (86)
T ss_pred hHHHHHHHCCH-HHHHHhhc------------------------------------------cCCHHHHHHHHHHHHHHH
Confidence 58899999999 99988888 899999999999999999
Q ss_pred ccc-cCCCCCCCcceEeechhhhhhHHHHHhhhhHhhhhhhhHhHHHHHHh
Q 023851 86 GLR-ANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA 135 (276)
Q Consensus 86 G~~-~~~~~~~~~~~~~isr~~Lg~vyAAsmM~GYFLr~~eqR~~LE~sl~ 135 (276)
|++ |++.|+ ++++++|++||+||+++||+|||||++|+|++||++|+
T Consensus 39 G~l~p~~~~~---~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~ 86 (86)
T PF05542_consen 39 GNLSPSDQFN---VTIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK 86 (86)
T ss_pred cCCCCcccCc---ceeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 999 877655 79999999999999999999999999999999999985
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| >PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00