Citrus Sinensis ID: 024003
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 274 | ||||||
| 358249046 | 268 | uncharacterized protein LOC100810003 [Gl | 0.978 | 1.0 | 0.766 | 1e-120 | |
| 224127704 | 268 | predicted protein [Populus trichocarpa] | 0.978 | 1.0 | 0.784 | 1e-118 | |
| 255541628 | 268 | conserved hypothetical protein [Ricinus | 0.978 | 1.0 | 0.795 | 1e-118 | |
| 449441454 | 268 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 1.0 | 0.791 | 1e-115 | |
| 357507383 | 268 | hypothetical protein MTR_7g077870 [Medic | 0.978 | 1.0 | 0.755 | 1e-115 | |
| 388500274 | 268 | unknown [Lotus japonicus] | 0.978 | 1.0 | 0.759 | 1e-115 | |
| 297824659 | 268 | hypothetical protein ARALYDRAFT_904052 [ | 0.978 | 1.0 | 0.751 | 1e-113 | |
| 356568400 | 268 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 1.0 | 0.755 | 1e-112 | |
| 388522265 | 270 | unknown [Lotus japonicus] | 0.978 | 0.992 | 0.766 | 1e-111 | |
| 225454274 | 268 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 1.0 | 0.773 | 1e-111 |
| >gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/274 (76%), Positives = 239/274 (87%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGVDS E+WI+DQMHT +
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVDSTTENWIIDQMHT------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ +LLVRLLLE R P++RKSSVAEGLTVEGILENW K+KP+IMEEW E R+
Sbjct: 55 RPVVETGYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDEKRDD 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI+L GKVRDEW++ DF TWIGANRLYPGVSDALK ASSR+YIVT+ QSRF + LLRELA
Sbjct: 115 LIDLFGKVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALLRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVTI P+R+YGLGTGPKV VLKQLQKKPEHQGL LHFVEDRLATLKNVIKEPELD WNLY
Sbjct: 175 GVTIPPERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L +WGYNT KER EAA++PRI +L+LS+F KLK
Sbjct: 235 LGNWGYNTQKEREEAAAIPRIHVLELSNFSKKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/274 (78%), Positives = 240/274 (87%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFD VDS L+DWIVDQMH +
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPVLFDTVDSTLQDWIVDQMHI------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLEMR+PS+RKSSVAEGLTV+GIL+NW KIKPVIMEEW+ENR+A
Sbjct: 55 RPVVETGYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAENRDA 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LIEL GKVRDEWMD D TWIGANR YPGV DALK ASS IYIVT+ QSRF + LL+ELA
Sbjct: 115 LIELFGKVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALLQELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
G+ I P+R+YGLGTGPKV VLKQLQ+KPEHQGL+LHFVEDRLATLKNVIK+PELDGWNLY
Sbjct: 175 GLKIPPERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDGWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L DWGYNT +ER EAAS+PRI LLQL+DF KLK
Sbjct: 235 LGDWGYNTHQERGEAASIPRITLLQLTDFSKKLK 268
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/274 (79%), Positives = 242/274 (88%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFDGVDSALE+WIVDQM FI+
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSALEEWIVDQM---FIV--- 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLEMR+PS+RKSSVAEGLTVEGILENW K+KPVIMEEW E+R++
Sbjct: 55 RPVVETGYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGEDRDS 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI L GK+RDEWMD D TWI ANR YPGV DALK ASSRIYIVT+ QSRF + LLRELA
Sbjct: 115 LIHLFGKIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALLRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
G+TI P+++YGLGTGPKV VLKQLQ+KPE+QGL LHFVEDRLATLKNVIKEPELDGWNLY
Sbjct: 175 GLTIPPEKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDGWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L DWGYNT KER EAAS+PRI+LLQLSDF KLK
Sbjct: 235 LGDWGYNTQKEREEAASIPRIRLLQLSDFSKKLK 268
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/274 (79%), Positives = 241/274 (87%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFD V+S+LE+WIVDQM+T +
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDEVESSLENWIVDQMYT------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLEMRLPS+RKSSVAEGLTV GILENW K+KPVIMEEW ENR+A
Sbjct: 55 RPVVETGYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGENRDA 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI+L GKVRD+W+D D TWIGANR YPGVSDALK ASSRIYIVT+ Q RF + LLRELA
Sbjct: 115 LIDLFGKVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALLRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVTI P+R+YGLGTGPKV VLK LQK PEHQGL+LHFVEDRLATLKNVIKE ELDGWN+Y
Sbjct: 175 GVTIPPERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKESELDGWNIY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
LVDWGYNT KER EAA++ RIQLLQLSDF TKLK
Sbjct: 235 LVDWGYNTQKEREEAAAIKRIQLLQLSDFSTKLK 268
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507383|ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|217073782|gb|ACJ85251.1| unknown [Medicago truncatula] gi|355498995|gb|AES80198.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|388518891|gb|AFK47507.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/274 (75%), Positives = 239/274 (87%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGVDS +EDWIVDQMHT +
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPVLFDGVDSTIEDWIVDQMHT------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLE R PS+RKSSVAEGL VEGILE+W +KP+IMEEW ENREA
Sbjct: 55 RPVVETGYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGENREA 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI+L GKVRDEW++ DF WIGANR+YPGVSDALK ASS+++IVT+ QSRF + LLRELA
Sbjct: 115 LIDLFGKVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALLRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVTI +R+YGLGTGPKV +LKQLQK+PEHQGL LHFVEDRLATLKNVIKEPELD WNLY
Sbjct: 175 GVTIPSERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L +WGYNT +E+ EAA++PRI++LQLSDF KLK
Sbjct: 235 LGNWGYNTAQEKEEAAAIPRIRVLQLSDFSKKLK 268
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/274 (75%), Positives = 239/274 (87%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGV+SA +DWIVDQMH +
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHA------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLE R PS+RKSSVAEGLTV+GILE W K+KPVIMEEW ENR+A
Sbjct: 55 RPVVETGYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDA 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI+L GKVRDEW++ +F TWIGANR+YPGVSDALK ASSR+YIVT+ QSRF + +LRELA
Sbjct: 115 LIDLFGKVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVTI P+R+YGLG+GPKV VLKQLQKKPEHQG LHFVEDRLATLKNVIKEPELD WNLY
Sbjct: 175 GVTIPPERIYGLGSGPKVEVLKQLQKKPEHQGPTLHFVEDRLATLKNVIKEPELDQWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L +WGYNT KE+ EAA++ RIQ+L+LSDF KLK
Sbjct: 235 LGNWGYNTRKEKEEAAAISRIQVLELSDFSKKLK 268
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/274 (75%), Positives = 237/274 (86%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHI------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLE R+PS+RKSSVAEGLTV+GILE+W KIKPVIME W E+++A
Sbjct: 55 RPVVETGYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDEDKDA 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI+L GKVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+A
Sbjct: 115 LIDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GV I +R+YGLG+GPKV VLK +Q KPEHQGL LHFVEDRLATLKNVIKEPELD WNLY
Sbjct: 175 GVIIPSERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L +WGYNT KERAEAAS+PRIQ+++LS F KLK
Sbjct: 235 LGNWGYNTEKERAEAASIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568400|ref|XP_003552399.1| PREDICTED: uncharacterized protein LOC100809469 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/274 (75%), Positives = 239/274 (87%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M LYALDFDGVICDSC ETA+SA+KAA++RWP LFDGVDS +EDWIVDQM T +
Sbjct: 1 MGHLYALDFDGVICDSCGETAISALKAAKLRWPPLFDGVDSTIEDWIVDQMIT------V 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+TLLLVRLLLE R+PS+RKSSV+EGL VE ILENW K+KP+IMEEW+ENRE
Sbjct: 55 RPVVETGYETLLLVRLLLETRVPSIRKSSVSEGLKVEDILENWFKLKPIIMEEWNENREE 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LI+L GKVRD+W++ DFT WIGANRLYPG +DAL+ ASS++YIVT+ QSRF + LLRELA
Sbjct: 115 LIDLFGKVRDDWLERDFTGWIGANRLYPGTADALRFASSKVYIVTTKQSRFADALLRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVTI P+RLYGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELD WNLY
Sbjct: 175 GVTIAPERLYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDNWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
LV+WG+NT KER EA + PRIQ+++LSDF +KLK
Sbjct: 235 LVNWGFNTQKEREEAQANPRIQVIELSDFSSKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388522265|gb|AFK49194.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/274 (76%), Positives = 237/274 (86%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M LYA DFDGVICDSC ETA+SA+KAA++RWPSLF VDSA EDWIV+QM T +
Sbjct: 3 MGHLYASDFDGVICDSCGETAISALKAAKLRWPSLFGSVDSATEDWIVEQMIT------V 56
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+TLLLVRLLLE R+PS+RKSSVA+GLTVE ILENWLK+KPVIMEEW+ENRE
Sbjct: 57 RPVVETGYETLLLVRLLLETRVPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNENRED 116
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
LIEL GKVRD+W++ DF WIGANRLYPG +DAL+ ASSR+YIVT+ Q RF + LLRELA
Sbjct: 117 LIELFGKVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALLRELA 176
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVT+ P+R+YGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELDGWNLY
Sbjct: 177 GVTLPPERIYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDGWNLY 236
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
LVDWG+NT KER EAA+ PRIQ+L LSDF KLK
Sbjct: 237 LVDWGFNTQKEREEAAANPRIQVLGLSDFSNKLK 270
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454274|ref|XP_002275801.1| PREDICTED: uncharacterized protein LOC100260183 [Vitis vinifera] gi|297745313|emb|CBI40393.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/274 (77%), Positives = 234/274 (85%), Gaps = 6/274 (2%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M DLYALDFDG++CDSC E++LSAVKAA+VRWP LFDGVDS LEDWIVDQM FI+
Sbjct: 1 MGDLYALDFDGILCDSCGESSLSAVKAAKVRWPGLFDGVDSKLEDWIVDQM---FII--- 54
Query: 61 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ LLLVRLLLEMRLPS+RKSSV EGLT+EGILENW K+KPVIMEEW E RE
Sbjct: 55 RPVVETGYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDEKREP 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
L++L GKVRDEWM+ D TWI ANR YPGV+DALK ASS++YIVT+ Q RF E LLRELA
Sbjct: 115 LVDLFGKVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALLRELA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GVTI +R+YGLGTGPKV VLKQLQK+ EHQGL LHFVEDRLATLKNVIKEPELDGWNLY
Sbjct: 175 GVTIPSERIYGLGTGPKVEVLKQLQKQSEHQGLTLHFVEDRLATLKNVIKEPELDGWNLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L WGYNT KER EAA + RIQLL+LSDF KLK
Sbjct: 235 LGKWGYNTQKEREEAAGISRIQLLELSDFSKKLK 268
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 274 | ||||||
| TAIR|locus:2050730 | 268 | AT2G45990 "AT2G45990" [Arabido | 0.978 | 1.0 | 0.697 | 4.4e-100 |
| TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 191/274 (69%), Positives = 219/274 (79%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHI------V 54
Query: 61 RPVVETGYDTXXXXXXXXXXXXXXXXKSSVAEGLTVEGILENWLKIKPVIMEEWSENREA 120
RPVVETGY+ KSSVAEGLTV+GILE+W K KPVIME W E+R+A
Sbjct: 55 RPVVETGYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDA 114
Query: 121 LIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA 180
L++L GKVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+A
Sbjct: 115 LVDLFGKVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIA 174
Query: 181 GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240
GV I +R+YGLG+GPKV VLK LQ KPEHQGL LHFVEDRLATLKNVIKEPELD W+LY
Sbjct: 175 GVIIPSERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLY 234
Query: 241 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274
L WGYNT KERAEAA +PRIQ+++LS F KLK
Sbjct: 235 LGTWGYNTEKERAEAAGIPRIQVIELSTFSNKLK 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 274 258 0.00087 114 3 11 22 0.47 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 622 (66 KB)
Total size of DFA: 213 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.19u 0.14s 20.33t Elapsed: 00:00:01
Total cpu time: 20.19u 0.14s 20.33t Elapsed: 00:00:01
Start: Sat May 11 06:30:49 2013 End: Sat May 11 06:30:50 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV1313 | hypothetical protein (269 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00150423 | SubName- Full=Putative uncharacterized protein; (206 aa) | • | • | 0.529 | |||||||
| gw1.XIII.355.1 | hypothetical protein (158 aa) | • | • | 0.514 | |||||||
| eugene3.00130190 | SubName- Full=Putative uncharacterized protein; (339 aa) | • | • | 0.502 | |||||||
| gw1.I.8641.1 | annotation not avaliable (113 aa) | • | 0.501 | ||||||||
| grail3.0089000701 | hypothetical protein (311 aa) | • | 0.501 | ||||||||
| eugene3.00061626 | hypothetical protein (259 aa) | • | 0.500 | ||||||||
| estExt_Genewise1_v1.C_LG_II4195 | SubName- Full=Putative uncharacterized protein; (140 aa) | • | 0.500 | ||||||||
| gw1.XII.99.1 | hypothetical protein (203 aa) | • | 0.498 | ||||||||
| gw1.2719.1.1 | annotation not avaliable (154 aa) | • | 0.498 | ||||||||
| gw1.1884.1.1 | annotation not avaliable (196 aa) | • | 0.498 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 274 | |||
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 100.0 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.97 | |
| PLN02940 | 382 | riboflavin kinase | 99.96 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.96 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.96 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.96 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.96 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.96 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.96 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.95 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.94 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.94 | |
| PLN02811 | 220 | hydrolase | 99.94 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.94 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.93 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.92 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.92 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.92 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.92 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.89 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.89 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.88 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.88 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.84 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.84 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.83 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.83 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.83 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.83 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.83 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.82 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.81 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.8 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.78 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.76 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.73 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.72 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.71 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.7 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.69 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.69 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.68 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.67 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.66 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.66 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.64 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.64 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.61 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.6 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.57 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.56 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.56 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.54 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.54 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.53 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.5 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.47 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.46 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.42 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.41 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.41 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.4 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.37 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.35 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.35 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.34 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.27 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.22 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.22 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.21 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.16 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.15 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.08 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.05 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.04 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.03 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.03 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.0 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.97 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.95 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.93 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.88 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.87 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 98.84 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.82 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.82 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.8 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.69 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.66 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.52 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 98.49 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.46 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.46 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.42 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.41 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.37 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.36 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.35 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.34 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.28 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.28 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.27 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.26 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.15 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.13 | |
| PLN02887 | 580 | hydrolase family protein | 98.05 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.02 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.02 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.02 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.01 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.99 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.98 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 97.93 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 97.87 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.78 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.75 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.7 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.62 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 97.59 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.56 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.56 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.48 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.45 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.44 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.39 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.37 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.29 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.27 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.21 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.18 | |
| PLN02423 | 245 | phosphomannomutase | 97.18 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.02 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.76 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.7 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.66 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.62 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.44 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.26 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.12 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.92 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.86 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.84 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.84 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 95.83 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.71 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.69 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.39 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 95.3 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.29 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 95.23 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 94.83 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 94.79 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 94.76 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 94.58 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.28 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 94.13 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 94.08 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.78 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 93.74 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 93.56 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 93.28 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 93.0 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 92.8 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 92.57 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 92.4 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 92.31 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 92.31 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 92.3 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 92.11 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 92.02 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 91.79 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 91.78 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 91.72 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 91.02 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 90.92 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 90.88 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 90.75 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 90.58 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 90.06 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 89.98 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 88.41 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 87.47 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 87.43 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 87.33 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.86 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 86.43 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 86.28 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 86.12 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 85.89 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 85.36 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 84.37 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 83.95 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 83.68 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 83.52 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 83.45 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 83.16 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 83.13 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 82.52 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 82.29 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 82.26 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 82.17 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 81.72 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 81.68 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 81.41 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 81.12 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 80.82 | |
| PLN03017 | 366 | trehalose-phosphatase | 80.49 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 80.17 |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=292.15 Aligned_cols=207 Identities=27% Similarity=0.362 Sum_probs=172.1
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.++|+|||||||+||.+.+..++|++++++ |+++. .... ++.+||.|.+..+. +.+...
T Consensus 4 ~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~------~~~~~-------~~~~------~~~~ig~~~~~~~~-~~~~~~- 62 (220)
T COG0546 4 IKAILFDLDGTLVDSAEDILRAFNAALAEL------GLPPL-------DEEE------IRQLIGLGLDELIE-RLLGEA- 62 (220)
T ss_pred CCEEEEeCCCccccChHHHHHHHHHHHHHc------CCCCC-------CHHH------HHHHhcCCHHHHHH-HHhccc-
Confidence 489999999999999999999999999999 44432 1245 88899999988662 443210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
..+...+.++.++++|.+.|.+.. .+++||||.++|+ ++|
T Consensus 63 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g 105 (220)
T COG0546 63 -----------------------------------DEEAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAG 105 (220)
T ss_pred -----------------------------------cchhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCC
Confidence 001111445667777777776655 5799999999999 899
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+|||++..++.+|++ +|+..||+.++|++ .||+|+++..++++++++|++++|||||.+||++|++
T Consensus 106 ~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~---- 180 (220)
T COG0546 106 YKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKA---- 180 (220)
T ss_pred CeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHH----
Confidence 99999999999999999996 99999999999954 3699999999999999998899999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|+|||++.+.+..++ |++++.++.+|...|
T Consensus 181 Ag~~~v~v~~g~~~~~~l~~~~--~d~vi~~~~el~~~l 217 (220)
T COG0546 181 AGVPAVGVTWGYNSREELAQAG--ADVVIDSLAELLALL 217 (220)
T ss_pred cCCCEEEEECCCCCCcchhhcC--CCEEECCHHHHHHHH
Confidence 9999999999998667777665 559999999997655
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=264.23 Aligned_cols=206 Identities=18% Similarity=0.173 Sum_probs=162.8
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++|+|||||||+||.+.+..+++.+++++ |++.. ..+. ++.++|.|.+.++. ..+..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~~-~~~~~- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPI-------TLAQ------LRPVVSKGARAMLA-VAFPE- 69 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCC-------CHHH------HHHHhhhHHHHHHH-HHhcc-
Confidence 6799999999999999999999999999999 44432 1234 66678888766441 21100
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
.+.+..++....+++.|.+.+ ....++|||+.++|+ ++
T Consensus 70 -----------------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~ 110 (229)
T PRK13226 70 -----------------------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECA 110 (229)
T ss_pred -----------------------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHC
Confidence 011222233444455554432 234689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...+..++++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+||||+.+|+++|++
T Consensus 111 g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~--- 186 (229)
T PRK13226 111 GCVWGIVTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA--- 186 (229)
T ss_pred CCeEEEECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999865 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCCh-HHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~-~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|+|||+.. +.+... .|++++.++++|.++|
T Consensus 187 -aG~~~i~v~~g~~~~~~~~~~~--~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 187 -AGMPSVAALWGYRLHDDDPLAW--QADVLVEQPQLLWNPA 224 (229)
T ss_pred -CCCcEEEEeecCCCCCcChhhc--CCCeeeCCHHHHHHHh
Confidence 999999999999743 334443 4779999999999887
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=249.28 Aligned_cols=201 Identities=15% Similarity=0.136 Sum_probs=155.8
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.++|+|||||||+||.+.+..+.+.+++++. .+..+ .+. ++.++|......+ +.+
T Consensus 3 ~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~------~~~~~G~~~~~~~--~~~---- 57 (214)
T PRK13288 3 INTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------RED------VLPFIGPSLHDTF--SKI---- 57 (214)
T ss_pred ccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHH------HHHHhCcCHHHHH--Hhc----
Confidence 4899999999999999999999999999983 22111 123 4445565443322 111
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.++..++....++..+.+ ......++|||+.++|+ ++|
T Consensus 58 -----------------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~L~~~g 98 (214)
T PRK13288 58 -----------------------------------DESKVEEMITTYREFNHE----HHDELVTEYETVYETLKTLKKQG 98 (214)
T ss_pred -----------------------------------CHHHHHHHHHHHHHHHHH----hhhhhcccCcCHHHHHHHHHHCC
Confidence 111112222333333322 22345689999999999 689
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||+++..+..+|+. +|+..||+.++|.+ .||+|+++.+++++++++|++++|||||.+|+++|++
T Consensus 99 ~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~---- 173 (214)
T PRK13288 99 YKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKN---- 173 (214)
T ss_pred CeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----
Confidence 99999999999999999996 99999999999975 3599999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||+++++++.+.+ |++++.++.+|...+
T Consensus 174 aG~~~i~v~~g~~~~~~l~~~~--~~~~i~~~~~l~~~i 210 (214)
T PRK13288 174 AGTKTAGVAWTIKGREYLEQYK--PDFMLDKMSDLLAIV 210 (214)
T ss_pred CCCeEEEEcCCCCCHHHHhhcC--cCEEECCHHHHHHHH
Confidence 9999999999998887776654 669999999987643
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=247.15 Aligned_cols=206 Identities=19% Similarity=0.248 Sum_probs=157.9
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccccc
Q 024003 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLPS 84 (274)
Q Consensus 5 ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~~ 84 (274)
|+|||||||+||.+.+..+++.+++++ |+++.+ ... ++.++|.+....+ .+.+...
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~------~~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~~---- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAAL------GLPPAT-------LAR------VIGFIGNGVPVLM-ERVLAWA---- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHH------HHHHhcccHHHHH-HHHhhcc----
Confidence 699999999999999999999999988 343221 223 4456777765443 1222110
Q ss_pred ccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcE
Q 024003 85 LRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 161 (274)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~l 161 (274)
+.. .+.+..++....+.+.|. +......++|||+.++|+ ++|+++
T Consensus 57 --------~~~--------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~L~~l~~~g~~~ 104 (213)
T TIGR01449 57 --------GQE--------------------PDAQRVAELRKLFDRHYE----EVAGELTSVFPGVEATLGALRAKGLRL 104 (213)
T ss_pred --------ccc--------------------cChHHHHHHHHHHHHHHH----HhccccCccCCCHHHHHHHHHHCCCeE
Confidence 000 111222223333344433 333445789999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCC
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 237 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv 237 (274)
+|+||++...++.++++ +|+..+|+.++|++ .||+|+++.+++++++++|++|+|||||.+|+++|++ ||+
T Consensus 105 ~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~----aG~ 179 (213)
T TIGR01449 105 GLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA----AGC 179 (213)
T ss_pred EEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH----CCC
Confidence 99999999999999996 99999999999875 3699999999999999999999999999999999998 999
Q ss_pred cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 238 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 238 ~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++|+|.||+++.+++...+ |++++.++.+|.+.|
T Consensus 180 ~~i~v~~g~~~~~~l~~~~--a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 180 PSVLLTYGYRYGEAIDLLP--PDVLYDSLNELPPLL 213 (213)
T ss_pred eEEEEccCCCCCcchhhcC--CCeEeCCHHHHHhhC
Confidence 9999999998877776654 569999999987643
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=252.16 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=157.8
Q ss_pred ceEEEecCcccccCHH-HHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~-di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|+|||||||+||.. .+..+++.+++++ |++.. .++ ++..+|.+....+. ..+.
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~G~~~~~~~~-~~~~--- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEF------GVQIT--------LEE------ARGPMGLGKWDHIR-ALLK--- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHc------CCCcc--------HHH------HHHhcCccHHHHHH-HHhc---
Confidence 7899999999999964 3578899999888 44321 133 45567777654431 1110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhc--cCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
..... +.+.+.+| .+.++..+....|++.|.+. .....++|||+.++|+ +
T Consensus 59 --------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~ 113 (253)
T TIGR01422 59 --------------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRA 113 (253)
T ss_pred --------------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHH
Confidence 00010 11112222 13334444444555544333 2345789999999999 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~ 230 (274)
+|++++|+||+++..++.+|++ +|+..+| +.|+|++ .||+|+++..+++++|+. |++|+|||||.+|+++|++
T Consensus 114 ~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~ 192 (253)
T TIGR01422 114 RGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRN 192 (253)
T ss_pred CCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHH
Confidence 8999999999999999999996 9999885 8999875 369999999999999995 9999999999999999998
Q ss_pred cCccCCCcEEEEeCCCCC-----------------------hHHHHhcCCCCCceeechhHHHhhc
Q 024003 231 EPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~-----------------------~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||++|+|.||+++ .++|..++ |++++.++.+|...|
T Consensus 193 ----aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 193 ----AGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAG--AHYVIDTLAELPAVI 252 (253)
T ss_pred ----CCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcC--CCEehhcHHHHHHhh
Confidence 99999999999973 35676654 569999999987654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=249.82 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=152.1
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhC-CCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRW-PSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~-~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
.++|+|||||||+||.+.+..+++.++++++ +. |.+.. .... .+.++|.+.+..+ .+.+..
T Consensus 22 ~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~---g~~~~-------~~~~------~~~~~G~~~~~~~-~~~~~~- 83 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNG---GVPIT-------EEFF------VENIAGKHNEDIA-LGLFPD- 83 (248)
T ss_pred cCEEEEcCCCccCcCHHHHHHHHHHHHHHhcccc---CCCCC-------HHHH------HHHcCCCCHHHHH-HHHcCc-
Confidence 3799999999999999999999999999992 11 12211 1112 3456777665543 122100
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. . +...+....+++.|.+.+ .....+||||.++|+ ++
T Consensus 84 ------------~--~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~ 123 (248)
T PLN02770 84 ------------D--L----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDR 123 (248)
T ss_pred ------------c--h----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHc
Confidence 0 0 000111122333333322 234689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...++..|++ +|+..||+.|++++ .||+|+++++++++++++|++|+||||+..|+++|++
T Consensus 124 g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~--- 199 (248)
T PLN02770 124 GLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA--- 199 (248)
T ss_pred CCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999876 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+++|+|.||+ ..+++... .|++++.++.++
T Consensus 200 -aGi~~i~v~~g~-~~~~l~~~--~a~~vi~~~~e~ 231 (248)
T PLN02770 200 -AGMPVVGLTTRN-PESLLMEA--KPTFLIKDYEDP 231 (248)
T ss_pred -CCCEEEEEeCCC-CHHHHhhc--CCCEEeccchhh
Confidence 999999999997 55556544 566999999984
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=239.96 Aligned_cols=206 Identities=16% Similarity=0.115 Sum_probs=160.1
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhccccc-ccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL-RPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~v-r~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|+|||||||+||.+.+..+.+.+++++ |++... .+ + +.++|.+...++ .+.+ .
T Consensus 2 k~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~~--------~~------~~~~~~g~~~~~~~-~~~~-~-- 57 (220)
T TIGR03351 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAA------GLSPTP--------EE------VQSAWMGQSKIEAI-RALL-A-- 57 (220)
T ss_pred cEEEEecCCCeeccCchHHHHHHHHHHHc------CCCCCH--------HH------HHHhhcCCCHHHHH-HHHH-h--
Confidence 78999999999999999999999999988 443211 22 2 226676655433 1222 1
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.++.+.+..++....+++.|.+.|.. ...++|||+.++|+ ++|
T Consensus 58 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g 103 (220)
T TIGR03351 58 -------------------------------LDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSG 103 (220)
T ss_pred -------------------------------ccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCC
Confidence 11122223333344455555443322 24689999999999 689
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCC--CCCceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVT--ITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~--~~f~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~ 231 (274)
++++|+||++...++.+|++ +|+. .+|+.+++.+ .||+|+++..+++++++. |++|+||||+..|+++|++
T Consensus 104 ~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~- 181 (220)
T TIGR03351 104 IKVALTTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGIN- 181 (220)
T ss_pred CEEEEEeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHH-
Confidence 99999999999999999996 9998 9999999875 259999999999999997 7999999999999999998
Q ss_pred CccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 232 PELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 232 ~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||++ |+|.||+.+.+++...+ |++++.++.+|...+
T Consensus 182 ---aG~~~~i~~~~g~~~~~~~~~~~--~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 182 ---AGAGAVVGVLTGAHDAEELSRHP--HTHVLDSVADLPALL 219 (220)
T ss_pred ---CCCCeEEEEecCCCcHHHHhhcC--CceeecCHHHHHHhh
Confidence 99999 99999999888887654 669999999987654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=239.24 Aligned_cols=196 Identities=20% Similarity=0.231 Sum_probs=152.7
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccccc
Q 024003 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLPS 84 (274)
Q Consensus 5 ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~~ 84 (274)
|+|||||||+||.+.+..++|.+++++. |.+.. ..+. ++.++|..++.++ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~------~~~~~g~~~~~~~--~~~------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEE------YRRHLGRYFPDIM--RIM------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHH------HHHHhCccHHHHH--HHc-------
Confidence 6999999999999999999999999862 22211 1234 5667777765443 111
Q ss_pred ccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcE
Q 024003 85 LRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 161 (274)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~l 161 (274)
+. +... . ..+...+ |. .....++|||+.++|+ ++|+++
T Consensus 54 --------~~----------------------~~~~-~---~~~~~~~---~~--~~~~~~~~~g~~~~L~~L~~~g~~~ 94 (205)
T TIGR01454 54 --------GL----------------------PLEM-E---EPFVRES---YR--LAGEVEVFPGVPELLAELRADGVGT 94 (205)
T ss_pred --------CC----------------------CHHH-H---HHHHHHH---HH--hhcccccCCCHHHHHHHHHHCCCeE
Confidence 11 0000 0 0011111 11 1235789999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCC
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 237 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv 237 (274)
+|+||++...++..+++ +|+..+|+.++|.+ .||+|+++.+++++++++|++++||||+.+|+++|++ +||
T Consensus 95 ~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~----~Gi 169 (205)
T TIGR01454 95 AIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARA----AGT 169 (205)
T ss_pred EEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHH----cCC
Confidence 99999999999999996 99999999999865 3699999999999999999999999999999999998 999
Q ss_pred cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 238 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 238 ~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++|+|.||+++.+++...+ |++++.++.++...+
T Consensus 170 ~~i~~~~g~~~~~~l~~~~--~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 170 ATVAALWGEGDAGELLAAR--PDFLLRKPQSLLALC 203 (205)
T ss_pred eEEEEEecCCChhhhhhcC--CCeeeCCHHHHHHHh
Confidence 9999999999988887654 669999999987654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=248.46 Aligned_cols=215 Identities=13% Similarity=0.067 Sum_probs=155.2
Q ss_pred ceEEEecCcccccCHHH-HHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~d-i~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
|+|+|||||||+||... ...+++.+++++ |++.. .++ ++..+|.+....+ +.+..
T Consensus 5 k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~G~~~~~~~--~~~~~-- 60 (267)
T PRK13478 5 QAVIFDWAGTTVDFGSFAPTQAFVEAFAQF------GVEIT--------LEE------ARGPMGLGKWDHI--RALLK-- 60 (267)
T ss_pred EEEEEcCCCCeecCCCccHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCCHHHHH--HHHHh--
Confidence 89999999999999643 367899999888 44321 123 4456676654433 11110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhcc--CHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
..... ..+...+|. +.++..+....+++.|.+. ......+|||+.++|+ +
T Consensus 61 --------------~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~ 115 (267)
T PRK13478 61 --------------MPRVA-------ARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRA 115 (267)
T ss_pred --------------cHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHH
Confidence 00000 011111221 2333344444445444433 2345789999999999 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~ 230 (274)
+|++++|+||++...++.+|+. +++..+| +.|+|++ .||+|+++.++++++|+. |++|+|||||.+|+++|++
T Consensus 116 ~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~ 194 (267)
T PRK13478 116 RGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLN 194 (267)
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHH
Confidence 8999999999999999999996 8988774 8898875 369999999999999996 6999999999999999998
Q ss_pred cCccCCCcEEEEeCCCCC-----------------------hHHHHhcCCCCCceeechhHHHhhc
Q 024003 231 EPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~-----------------------~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.|||+. .+++..++ |++++.++.++.+.|
T Consensus 195 ----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--a~~vi~~~~~l~~~l 254 (267)
T PRK13478 195 ----AGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG--AHYVIDTIADLPAVI 254 (267)
T ss_pred ----CCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC--CCeehhhHHHHHHHH
Confidence 99999999999973 35676665 459999999987654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=247.05 Aligned_cols=200 Identities=23% Similarity=0.243 Sum_probs=156.2
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+.+.+++++ |++..+ .+. ++.++|...+.++ +.+
T Consensus 63 k~vIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~~~~-------~~~------~~~~~g~~~~~i~--~~~----- 116 (273)
T PRK13225 63 QAIIFDFDGTLVDSLPTVVAIANAHAPDF------GYDPID-------ERD------YAQLRQWSSRTIV--RRA----- 116 (273)
T ss_pred CEEEECCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHH------HHHHhCccHHHHH--HHc-----
Confidence 78999999999999999999999999998 443221 122 3345554443322 111
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+.+.++.++....+++.|.+ +....++||||.++|+ ++|+
T Consensus 117 --------------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi 159 (273)
T PRK13225 117 --------------------------------GLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSL 159 (273)
T ss_pred --------------------------------CCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCC
Confidence 11222222333444444322 2345789999999999 7899
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCc
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 238 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~ 238 (274)
+++|+||+++..++.+|++ +|+..+|+.|++++. .+||+++..++++++++|++|+||||+.+|+++|++ ||+.
T Consensus 160 ~laIvSn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~----AG~~ 234 (273)
T PRK13225 160 CLGILSSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQ----VGLI 234 (273)
T ss_pred eEEEEeCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHH----CCCe
Confidence 9999999999999999996 999999999988664 488999999999999999999999999999999998 9999
Q ss_pred EEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 239 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 239 ~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+|+|.||+++.+++...+ |++++.++.+|...
T Consensus 235 ~I~v~~g~~~~~~l~~~~--ad~~i~~~~eL~~~ 266 (273)
T PRK13225 235 AVAVTWGFNDRQSLVAAC--PDWLLETPSDLLQA 266 (273)
T ss_pred EEEEecCCCCHHHHHHCC--CCEEECCHHHHHHH
Confidence 999999999988887654 66999999998654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=246.34 Aligned_cols=209 Identities=22% Similarity=0.275 Sum_probs=162.3
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++|+|||||||+||.+.+..+++.+++++ |++.. ..+. ++.++|.|...++ ...+...
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~-~~~l~~~ 71 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLEL------GRPPA-------GLEA------VRHWVGNGAPVLV-RRALAGS 71 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHH------HHHHhChhHHHHH-HHHhccc
Confidence 5689999999999999999999999999999 44321 1234 5668888876543 2222100
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
...++.+++..++....+++.|... .....+|||+.++|+ ++
T Consensus 72 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~ 116 (272)
T PRK13223 72 ------------------------------IDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQ 116 (272)
T ss_pred ------------------------------ccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHC
Confidence 0011122223333334444444321 224689999999999 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...++.++++ +|+..+|+.+++++ .||+|++++.+++++|++|++|+||||+.+|+++|++
T Consensus 117 g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~--- 192 (272)
T PRK13223 117 GVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKA--- 192 (272)
T ss_pred CCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999876 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
+|+++++|.|||+...++... .|+.++.++.+|..
T Consensus 193 -aGi~~i~v~~G~~~~~~l~~~--~~~~vi~~l~el~~ 227 (272)
T PRK13223 193 -AGVQCVALSYGYNHGRPIAEE--SPALVIDDLRALLP 227 (272)
T ss_pred -CCCeEEEEecCCCCchhhhhc--CCCEEECCHHHHHH
Confidence 999999999999888777664 46799999999864
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=243.73 Aligned_cols=200 Identities=14% Similarity=0.118 Sum_probs=151.2
Q ss_pred ceEEEecCcccccCHHHHH-HHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETA-LSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~-~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|||||||||+||.+.++ .+.+.+++++ |++... .+. ++.++|......+ ...+..
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~------G~~~~~-------~e~------~~~~~G~~~~~~~-~~l~~~-- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEE------GKRPPP-------AFL------LKRAEGMKNEQAI-SEVLCW-- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHc------CCCCCH-------HHH------HHHhcCCCHHHHH-HHHhcc--
Confidence 7899999999999987776 5888999998 444221 123 5668888776544 122210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
. .+.+...+....++..|... . ....++|||+.++|+ ++|
T Consensus 83 -----------~----------------------~~~~~~~~l~~~~~~~~~~~-~---~~~~~l~pg~~e~L~~L~~~g 125 (260)
T PLN03243 83 -----------S----------------------RDFLQMKRLAIRKEDLYEYM-Q---GGLYRLRPGSREFVQALKKHE 125 (260)
T ss_pred -----------C----------------------CCHHHHHHHHHHHHHHHHHH-H---ccCcccCCCHHHHHHHHHHCC
Confidence 0 01111122222233333211 1 124689999999999 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++...++.+|++ +|+..||+.|++++ .||+|+++..+++++|+.|++|+|||||.+|+++|++
T Consensus 126 ~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~---- 200 (260)
T PLN03243 126 IPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD---- 200 (260)
T ss_pred CEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----
Confidence 99999999999999999995 99999999999875 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
|||++|+|. |+.+..++. .|++++.++.+|..
T Consensus 201 aG~~~i~v~-g~~~~~~l~----~ad~vi~~~~el~~ 232 (260)
T PLN03243 201 GCMKCVAVA-GKHPVYELS----AGDLVVRRLDDLSV 232 (260)
T ss_pred cCCEEEEEe-cCCchhhhc----cCCEEeCCHHHHHH
Confidence 999999995 887766553 36799999999854
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=230.09 Aligned_cols=194 Identities=18% Similarity=0.152 Sum_probs=143.4
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+++.+++++ |++.. .. .+.+.|.+....+ +.+..
T Consensus 4 k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~------~~~~~g~~~~~~~--~~~~~--- 57 (218)
T PRK11587 4 KGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EV------LNFIHGKQAITSL--RHFMA--- 57 (218)
T ss_pred CEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HH------HHHHcCCCHHHHH--HHHhc---
Confidence 89999999999999999999999999999 55421 11 2224566655433 22211
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+. +.+++.+.+..+ ..|. .......++|||+.++|+ ++|+
T Consensus 58 ----------~~----------------------~~~~~~~~~~~~-~~~~----~~~~~~~~~~pg~~e~L~~L~~~g~ 100 (218)
T PRK11587 58 ----------GA----------------------SEAEIQAEFTRL-EQIE----ATDTEGITALPGAIALLNHLNKLGI 100 (218)
T ss_pred ----------cC----------------------CcHHHHHHHHHH-HHHH----HhhhcCceeCcCHHHHHHHHHHcCC
Confidence 00 111111111111 1111 112345789999999998 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||++...+...++. +|+. +|+.+++.+ .||+|+++..+++++|+.|++|+|||||..|+++|++ |
T Consensus 101 ~~~ivTn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~----a 174 (218)
T PRK11587 101 PWAIVTSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLA----A 174 (218)
T ss_pred cEEEEcCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHH----C
Confidence 9999999999999999995 8884 577788754 3699999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|+++|+|+||+... +. ..|++++.++.+|.
T Consensus 175 G~~~i~v~~~~~~~-~~----~~~~~~~~~~~el~ 204 (218)
T PRK11587 175 GCHVIAVNAPADTP-RL----DEVDLVLHSLEQLT 204 (218)
T ss_pred CCEEEEECCCCchh-hh----ccCCEEecchhhee
Confidence 99999999997432 22 24779999999874
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=246.11 Aligned_cols=199 Identities=12% Similarity=0.087 Sum_probs=150.3
Q ss_pred ceEEEecCcccccCHHHHHH-HHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETAL-SAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~-a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|||||||||+||.+.+.. +.+.+++++ |++... ... ++.++|.+.+..+ .+.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~------G~~~~~-------~e~------~~~~~G~~~~~~l-~~ll~~-- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEE------GKSPPP-------AFI------LRRVEGMKNEQAI-SEVLCW-- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHc------CCCCCH-------HHH------HHHhcCCCHHHHH-HHHhhc--
Confidence 78999999999999998876 555566677 444321 123 4668888776544 122210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
. .++.+.++....+++.|.+. ......+|||+.|+|+ ++|
T Consensus 190 -----------~----------------------~~~~~~e~l~~~~~~~y~~~----~~~~~~l~pGa~ElL~~Lk~~G 232 (381)
T PLN02575 190 -----------S----------------------RDPAELRRMATRKEEIYQAL----QGGIYRLRTGSQEFVNVLMNYK 232 (381)
T ss_pred -----------c----------------------CCHHHHHHHHHHHHHHHHHH----hccCCCcCcCHHHHHHHHHHCC
Confidence 0 01122223333344444332 2344689999999999 799
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++...++.+|++ +||..||+.|+|++. ||+|++++++++++|+.|++|+|||||..|+++|++
T Consensus 233 iklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~---- 307 (381)
T PLN02575 233 IPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD---- 307 (381)
T ss_pred CeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----
Confidence 99999999999999999996 999999999999763 699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|||++|+|.||+ ...++. .+++++.++.+|.
T Consensus 308 AGm~~IgV~~~~-~~~~l~----~Ad~iI~s~~EL~ 338 (381)
T PLN02575 308 ARMKCVAVASKH-PIYELG----AADLVVRRLDELS 338 (381)
T ss_pred cCCEEEEECCCC-ChhHhc----CCCEEECCHHHHH
Confidence 999999999986 333332 3568999999983
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=224.93 Aligned_cols=208 Identities=25% Similarity=0.317 Sum_probs=160.8
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+....+.+.+++++ |.+.. .... ++.++|.+...++ .+.+...
T Consensus 7 ~~iiFD~DGTL~d~~~~~~~~~~~~~~~~------~~~~~-------~~~~------~~~~~g~~~~~~~-~~~~~~~-- 64 (226)
T PRK13222 7 RAVAFDLDGTLVDSAPDLAAAVNAALAAL------GLPPA-------GEER------VRTWVGNGADVLV-ERALTWA-- 64 (226)
T ss_pred cEEEEcCCcccccCHHHHHHHHHHHHHHC------CCCCC-------CHHH------HHHHhCccHHHHH-HHHHhhc--
Confidence 89999999999999999999999999888 33322 1234 5567888876654 2333110
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+. ..+.++.++....+.+.|.+ ......+++||+.++|+ ++|+
T Consensus 65 ----------~~--------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~ 110 (226)
T PRK13222 65 ----------GR--------------------EPDEELLEKLRELFDRHYAE----NVAGGSRLYPGVKETLAALKAAGY 110 (226)
T ss_pred ----------cC--------------------CccHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCC
Confidence 00 01223333333444444433 23335789999999999 6899
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||++....+.++++ +|+..+|+.+++.+ .||+|+++..++++++++|++++||||+.+|+++|++ +
T Consensus 111 ~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~----~ 185 (226)
T PRK13222 111 PLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARA----A 185 (226)
T ss_pred eEEEEeCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHH----C
Confidence 9999999999999999996 99999999999865 3599999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+++|+|.||+.+.+++... .|++++.++.+|.+-|
T Consensus 186 g~~~i~v~~g~~~~~~~~~~--~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 186 GCPSVGVTYGYNYGEPIALS--EPDVVIDHFAELLPLL 221 (226)
T ss_pred CCcEEEECcCCCCccchhhc--CCCEEECCHHHHHHHH
Confidence 99999999999876666543 5779999999987654
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=234.13 Aligned_cols=217 Identities=17% Similarity=0.190 Sum_probs=147.0
Q ss_pred ceEEEecCcccccCH-HHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~-~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|||||||||+||. +.+..+++.+++++ |+++.. ...+.+.. ++. +|.|...+. +.+...
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~------G~~~~~--~~~~~~~~------~~~-~g~~~~~~~--~~~~~~- 102 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEF------GLRPVE--WDVELYDE------LLN-IGGGKERMT--WYFNEN- 102 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHc------CCCCCC--CCHHHHHH------HHc-cCCChHHHH--HHHHHc-
Confidence 789999999999999 88889999999998 442110 00112223 334 777765432 222110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCC-CCCCccHHHHHH---hC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDALK---LA 157 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~-~~lypGv~e~L~---~~ 157 (274)
+...... .....+++..++....+.+.+.+.|.+.+... .++|||+.++|+ ++
T Consensus 103 -----------~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~ 159 (286)
T PLN02779 103 -----------GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAA 159 (286)
T ss_pred -----------CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHC
Confidence 0000000 00000111112222223333333333332222 489999999998 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCC---CCCceEecCC---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVT---ITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~---~~f~~v~g~~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
|++++|+||++...+..+++. ++.. .+|+.+.+.+ .||+|+++.++++++|++|++|+||||+.+|+++|++
T Consensus 160 g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~- 237 (286)
T PLN02779 160 GIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKA- 237 (286)
T ss_pred CCeEEEEeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHH-
Confidence 999999999999999999995 6433 3345553333 3699999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
|||++|+|.||+++.+++ ..|+.++.++.++
T Consensus 238 ---aG~~~i~v~~g~~~~~~l----~~ad~vi~~~~~l 268 (286)
T PLN02779 238 ---AGMRCIVTKSSYTADEDF----SGADAVFDCLGDV 268 (286)
T ss_pred ---cCCEEEEEccCCcccccc----CCCcEEECChhhc
Confidence 999999999999887665 2567999999887
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=220.28 Aligned_cols=205 Identities=17% Similarity=0.138 Sum_probs=151.1
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++|+|||||||+||-+.+..+.+.+++++ |++... ... ++.++|...+..+ +.+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~--~~~~~~ 64 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDISR-------REE------LPDTLGLRIDQVV--DLWYAR 64 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHC------CCCCCH-------HHH------HHHhhCCCHHHHH--HHHHHh
Confidence 3489999999999999999999999999988 333210 123 4445565554432 211110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. . +......+....+++.+.+.+ .....+|||+.++|+ ++
T Consensus 65 ~-----------~----------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~ 107 (222)
T PRK10826 65 Q-----------P----------------------WNGPSRQEVVQRIIARVISLI----EETRPLLPGVREALALCKAQ 107 (222)
T ss_pred c-----------C----------------------CCCCCHHHHHHHHHHHHHHHH----hcCCCCCCCHHHHHHHHHHC
Confidence 0 0 000001122233333333222 234789999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||+....++.+++. +|+..+|+.+++++ .||+|+++..+++++|++|++|+|||||.+|+++|++
T Consensus 108 g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~--- 183 (222)
T PRK10826 108 GLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKA--- 183 (222)
T ss_pred CCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHH---
Confidence 999999999999999999996 99999999999875 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
||+++|+|.++....+.. .. .++.++.|+.+|..
T Consensus 184 -aG~~~i~v~~~~~~~~~~-~~--~~~~~~~~~~dl~~ 217 (222)
T PRK10826 184 -ARMRSIVVPAPEQQNDPR-WA--LADVKLESLTELTA 217 (222)
T ss_pred -cCCEEEEecCCccCchhh-hh--hhheeccCHHHHhh
Confidence 999999999997654332 22 35689999999943
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=236.22 Aligned_cols=199 Identities=12% Similarity=0.048 Sum_probs=150.0
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+++.+++++ |.+.. .++ ++.++|......+ .+.+..
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~------G~~~~--------~~~------~~~~~G~~~~~~~-~~~~~~--- 67 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKY------GKQWD--------GRE------AQKIVGKTPLEAA-ATVVED--- 67 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCCHHHHH-HHHHHH---
Confidence 68999999999999999999999999988 44321 122 4446676554432 122211
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
++.+ ...++....+++.+.+++ ....+|||+.++|+ ++|+
T Consensus 68 -------------------------------~~~~-~~~~~~~~~~~~~~~~~~-----~~~~l~pGv~elL~~Lk~~g~ 110 (382)
T PLN02940 68 -------------------------------YGLP-CSTDEFNSEITPLLSEQW-----CNIKALPGANRLIKHLKSHGV 110 (382)
T ss_pred -------------------------------hCCC-CCHHHHHHHHHHHHHHHH-----ccCCCCcCHHHHHHHHHHCCC
Confidence 0100 001112223333333322 24689999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||+++..++..|+.++|+..+|+.|++++ .||+|+++..+++++|++|++|+|||||..|+++|++ |
T Consensus 111 ~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~----a 186 (382)
T PLN02940 111 PMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA----A 186 (382)
T ss_pred cEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH----c
Confidence 9999999999999998873389999999999876 3699999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
||++|+|.||+.+.. . ...|+..+.++.+|.
T Consensus 187 Gi~~I~v~~g~~~~~--~--~~~ad~~i~sl~el~ 217 (382)
T PLN02940 187 GMEVIAVPSIPKQTH--L--YSSADEVINSLLDLQ 217 (382)
T ss_pred CCEEEEECCCCcchh--h--ccCccEEeCCHhHcC
Confidence 999999999986542 2 245779999999875
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=239.59 Aligned_cols=207 Identities=16% Similarity=0.219 Sum_probs=150.6
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCC-CCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWP-SLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~-~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|.++|+|||||||+||.+.+..+.+++++++.. ......++ .+. ++.++|......+ .+.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~G~~~~~~~-~~l~~~ 303 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP---------IDK------YREIMGVPLPKVW-EALLPD 303 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC---------HHH------HHHHcCCChHHHH-HHHhhh
Confidence 558999999999999999999999999999821 10000111 123 4556776665433 122100
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
. ..+..++....+++.|.+.. .....++|||+.++|+ +
T Consensus 304 ----------------------------------~--~~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~ 344 (459)
T PRK06698 304 ----------------------------------H--SLEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKE 344 (459)
T ss_pred ----------------------------------c--chhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHH
Confidence 0 00000111122223222211 1234689999999998 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
+|++++|+||++...++.+|++ +|+..||+.+++++. +|||+++..++++++ |++|+|||||.+|+++|++
T Consensus 345 ~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~--- 418 (459)
T PRK06698 345 NNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKD--- 418 (459)
T ss_pred CCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHH---
Confidence 8999999999999999999995 999999999998763 499999999998865 6899999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||++..+++ ..|++++.++.+|...+
T Consensus 419 -AG~~~I~v~~~~~~~~~~----~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 419 -NGLIAIGCNFDFAQEDEL----AQADIVIDDLLELKGIL 453 (459)
T ss_pred -CCCeEEEEeCCCCccccc----CCCCEEeCCHHHHHHHH
Confidence 999999999999766544 24789999999987654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=213.54 Aligned_cols=121 Identities=21% Similarity=0.235 Sum_probs=105.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..++|||+.++|+ ++|++++|+||++...+...|++ +|+..||+.|++++ .||+|+++..+++++|++|+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3689999999999 78999999999999999999996 99999999999764 3699999999999999999999
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
+|||||. +|+++|++ +|+.+|+|.||+....+.. ....|++++.++.++
T Consensus 171 ~~igDs~~~di~~A~~----aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKN----LGMKTVWINQGKSSKMEDD-VYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHH----CCCEEEEECCCCCcccccc-cccCCCeeeCcHHhh
Confidence 9999998 89999998 9999999999987543322 234577999888775
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=213.56 Aligned_cols=200 Identities=13% Similarity=0.068 Sum_probs=142.6
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+.+.+++++ |++... + +. .+.+.|......+ .+.+.
T Consensus 5 ~~viFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~~-----~--~~------~~~~~g~~~~~~~-~~~~~---- 60 (221)
T PRK10563 5 EAVFFDCDGTLVDSEVICSRAYVTMFAEF------GITLSL-----E--EV------FKRFKGVKLYEII-DIISK---- 60 (221)
T ss_pred CEEEECCCCCCCCChHHHHHHHHHHHHHc------CCCCCH-----H--HH------HHHhcCCCHHHHH-HHHHH----
Confidence 89999999999999999999999999888 443211 0 11 2334454433322 12221
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhcc--CHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHHhCCCc
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSR 160 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~~~g~~ 160 (274)
.++. +.++ ....|++.+.+.+ ....++||||.++|+.-+++
T Consensus 61 ------------------------------~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~ 103 (221)
T PRK10563 61 ------------------------------EHGVTLAKAE---LEPVYRAEVARLF----DSELEPIAGANALLESITVP 103 (221)
T ss_pred ------------------------------HhCCCCCHHH---HHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCC
Confidence 1111 1111 1122333333222 23478999999999966799
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCc-eEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPD-RLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~-~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
++|+||++...++..|++ +|+..+|+ .|++++ .||+|+++..++++++++|++|+||||+..||++|++ |
T Consensus 104 ~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~----a 178 (221)
T PRK10563 104 MCVVSNGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA----A 178 (221)
T ss_pred EEEEeCCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----C
Confidence 999999999999999996 99999995 566653 3699999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
|+++|++.++..... .. ..|..++.++.+|...
T Consensus 179 G~~~i~~~~~~~~~~-~~---~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 179 GMEVFYFCADPHNKP-ID---HPLVTTFTDLAQLPEL 211 (221)
T ss_pred CCEEEEECCCCCCcc-hh---hhhhHHHHHHHHHHHH
Confidence 999999987655432 22 1234567888777643
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=206.81 Aligned_cols=175 Identities=14% Similarity=0.107 Sum_probs=127.4
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+.+.+++++ |++.. ... ++.+.|......+ +.+....
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~~- 62 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRY------GLQFD--------EQA------MVALNGSPTWRIA--QAIIELN- 62 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCCHHHHH--HHHHHHh-
Confidence 78999999999999999999999999998 44321 122 3445565443322 2221100
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCCc
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSR 160 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~~ 160 (274)
+. ..+.+++... +...|.+. ......+|||+ ++|+ .++++
T Consensus 63 ----------~~--------------------~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~ 104 (188)
T PRK10725 63 ----------QA--------------------DLDPHALARE---KTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRP 104 (188)
T ss_pred ----------CC--------------------CCCHHHHHHH---HHHHHHHH----HhccCCCccHH-HHHHHHHhCCC
Confidence 00 0011111111 11122211 12345789975 7787 56699
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 236 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 236 (274)
++|+||+++..++..|++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+.+|+++|++ ||
T Consensus 105 l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~----aG 179 (188)
T PRK10725 105 MAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA----AG 179 (188)
T ss_pred EEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH----CC
Confidence 999999999999999996 99999999999875 3699999999999999999999999999999999998 99
Q ss_pred CcEEEEe
Q 024003 237 WNLYLVD 243 (274)
Q Consensus 237 v~~i~v~ 243 (274)
+++|+|.
T Consensus 180 ~~~i~~~ 186 (188)
T PRK10725 180 MDAVDVR 186 (188)
T ss_pred CEEEeec
Confidence 9999985
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-28 Score=204.99 Aligned_cols=178 Identities=18% Similarity=0.170 Sum_probs=130.9
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcccc
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLP 83 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~ 83 (274)
+|+|||||||+||.+....+.+.+++.+ |++.. ... .+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~--- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADEL------GIPFD--------EEF------NESLKGVSREDSL-ERILDLG--- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCChHHHH-HHHHHhc---
Confidence 5899999999999999999999999888 44421 112 3345565544433 1222110
Q ss_pred cccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCc
Q 024003 84 SLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSR 160 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~ 160 (274)
+. .++++..++....+.+.|.+.+.. ....++||||.++|+ ++|++
T Consensus 57 ---------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~ 105 (185)
T TIGR01990 57 ---------GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIK 105 (185)
T ss_pred ---------CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCe
Confidence 10 012233333444444555444322 123589999999999 79999
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 236 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 236 (274)
++|+||+.. ....|++ +|+..+|+.+++++ .||+|+++.+++++++++|++|+||||+.+|+++|++ +|
T Consensus 106 ~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~----aG 178 (185)
T TIGR01990 106 IALASASKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKA----AG 178 (185)
T ss_pred EEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHH----cC
Confidence 999999764 4678996 99999999999765 3699999999999999999999999999999999998 99
Q ss_pred CcEEEEe
Q 024003 237 WNLYLVD 243 (274)
Q Consensus 237 v~~i~v~ 243 (274)
|++|+|+
T Consensus 179 ~~~i~v~ 185 (185)
T TIGR01990 179 MFAVGVG 185 (185)
T ss_pred CEEEecC
Confidence 9999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=211.48 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=105.4
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~ 215 (274)
..++|||+.++|+ .+|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++.++++++|+. +++|
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3679999999999 77899999999999999999996 99999999999865 369999999999999985 4799
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEeCC-CCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wG-y~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
+||||+. +|+++|++ ||+++|++.|+ +... . ...|++.+.++.+|.+.||
T Consensus 172 ~~vgD~~~~Di~~A~~----aG~~~i~~~~~~~~~~---~--~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 172 LMVGDNLHSDILGGIN----AGIDTCWLNAHGREQP---E--GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEcCCcHHHHHHHHH----CCCcEEEECCCCCCCC---C--CCCCeEEECCHHHHHHHHh
Confidence 9999998 69999998 99999999854 3222 1 2357899999999987764
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=209.76 Aligned_cols=117 Identities=13% Similarity=0.074 Sum_probs=98.6
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC----CCceEecCC-CCCcHHHHHHHHhhCCCCCCc
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~----~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++|||+.++|+ +++++++++||++......++++ +++.. +|+.++|.+ .+|||+++..+++++| |++
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~ 147 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRV 147 (197)
T ss_pred HhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCc
Confidence 34679999999999 44568999999998877777774 77764 567777755 4699999999999999 889
Q ss_pred EEEEcCChhHHHHhhccCccC--CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 215 LHFVEDRLATLKNVIKEPELD--GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~A--gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
++|||||.+|+++|++ | ||++|+|+||+. ...+.|.+.+.|+.++.+
T Consensus 148 ~v~vgDs~~di~aA~~----a~~Gi~~i~~~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 148 VCFVDDLAHNLDAAHE----ALSQLPVIHMLRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred EEEeCCCHHHHHHHHH----HHcCCcEEEecchhh------ccccchhhhhccHHHHhc
Confidence 9999999999999998 8 999999999975 345577799999999875
|
2 hypothetical protein; Provisional |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=206.67 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=107.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhC-CCCCCc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l-~~~~~~ 214 (274)
..++|||+.++|+ ++ ++++|+||++...++.+|++ +|+..+|+.|++++ .||+|+++.++++++ |++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4689999999999 45 99999999999999999996 99999999999865 369999999999999 999999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++||||+. +|+++|++ +||++|+++||+.+. . ....|++++.++.+|.+.|
T Consensus 173 ~v~igD~~~~di~~A~~----~G~~~i~~~~~~~~~--~--~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQN----AGLDTCWMNPDMHPN--P--DDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred eEEECCCcHHHHHHHHH----CCCcEEEECCCCCCC--C--CCCCCceEECCHHHHHhhC
Confidence 99999998 79999998 999999999997653 1 2356889999999998653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=201.59 Aligned_cols=177 Identities=16% Similarity=0.134 Sum_probs=130.0
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+....+.+.+++++ |++. + ... ...+.|......+ ...+...
T Consensus 2 ~~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~-~-------~~~------~~~~~g~~~~~~~-~~~~~~~-- 58 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAPLHAQAWKHLADKY------GIEF-D-------KQY------NTSLGGLSREDIL-RAILKLR-- 58 (185)
T ss_pred CeEEEcCCCcccCChHHHHHHHHHHHHHc------CCCC-C-------HHH------HHHcCCCCHHHHH-HHHHHhc--
Confidence 78999999999999999999999999888 3431 1 112 2335554443322 1221110
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+ .++++++..+....+.+.|.+..+ .....+|||+.++|+ ++|+
T Consensus 59 ----------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~ 105 (185)
T TIGR02009 59 ----------K--------------------PGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGI 105 (185)
T ss_pred ----------C--------------------CCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCC
Confidence 0 012333333333334444333221 234789999999998 7899
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||+ ..++.+|++ +|+..+|+.++|++ .||+|+++.+++++++++|++++|||||..|+++|++ +
T Consensus 106 ~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~----~ 178 (185)
T TIGR02009 106 AVGLGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA----A 178 (185)
T ss_pred eEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----C
Confidence 99999999 668999996 99999999999865 3599999999999999999999999999999999998 8
Q ss_pred CCcEEEE
Q 024003 236 GWNLYLV 242 (274)
Q Consensus 236 gv~~i~v 242 (274)
|+++|+|
T Consensus 179 G~~~i~v 185 (185)
T TIGR02009 179 GMFAVAV 185 (185)
T ss_pred CCeEeeC
Confidence 9999986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=209.79 Aligned_cols=221 Identities=11% Similarity=0.097 Sum_probs=143.6
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
|+|+|||||||+||.+-+..+.+.+++.+....+ .+.... ....+. ++..++.......
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~----~~~~~~------~~~~~~~~~~~~~---------- 69 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQ----NEDLQR------LRQALREAEPEIY---------- 69 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCC----HHHHHH------HHHHHHHhCchhh----------
Confidence 7999999999999999999999988876610000 010000 011112 1111111110000
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCCc
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSR 160 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~~ 160 (274)
..+...........+..+|++.+..+.....+.+.|.. |.....+||||.++|+ +++++
T Consensus 70 --------------~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~ 130 (238)
T PRK10748 70 --------------HDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWP 130 (238)
T ss_pred --------------CcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCC
Confidence 00000111122334455565544432223333333322 2234689999999999 66799
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCC-hhHHHHhhccCccC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELD 235 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~A 235 (274)
++|+||++.. ++. +|+..||+.|++++ .||+|+++..+++++|++|++|+||||+ ..|+.+|++ +
T Consensus 131 l~i~Tn~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~----a 200 (238)
T PRK10748 131 LVAITNGNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIR----C 200 (238)
T ss_pred EEEEECCCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHH----C
Confidence 9999998876 474 99999999999865 3699999999999999999999999999 599999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+++|+|.-+.+...........|+..+.++.+|.+.|
T Consensus 201 G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 201 GMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred CCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 99999998765432111112245889999999987654
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=241.25 Aligned_cols=202 Identities=17% Similarity=0.243 Sum_probs=151.8
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+++.+++++ |++.. .+. ++.++|.+...++ +.+....
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~it--------~e~------~~~~~G~~~~~~~--~~~~~~~- 132 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEM------GVEVT--------VED------FVPFMGTGEANFL--GGVASVK- 132 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHhCCCHHHHH--HHHHHhc-
Confidence 78999999999999999999999999998 44421 122 3446666654332 1111100
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+.. +++.+ +..+.+.+.|.+.|... ....+|||+.++|+ ++|+
T Consensus 133 ----------~l~-------------------~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~ 178 (1057)
T PLN02919 133 ----------GVK-------------------GFDPD---AAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGL 178 (1057)
T ss_pred ----------CCC-------------------CCCHH---HHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCC
Confidence 000 00111 11223333444333221 12358999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCC-CCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~-~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
+++|+||+....++.+|++ +|+. .+|+.+++.+ .||+|+++++++++++++|++|+||||+..|+++|++
T Consensus 179 ~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~---- 253 (1057)
T PLN02919 179 KVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA---- 253 (1057)
T ss_pred eEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH----
Confidence 9999999999999999996 9996 7899999876 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
|||++|+|.||+ +.+++..++ |++++.++.++
T Consensus 254 aGm~~I~v~~~~-~~~~L~~~~--a~~vi~~l~el 285 (1057)
T PLN02919 254 AGMRCIAVTTTL-SEEILKDAG--PSLIRKDIGNI 285 (1057)
T ss_pred cCCEEEEECCCC-CHHHHhhCC--CCEEECChHHC
Confidence 999999999997 567787665 66999999887
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=194.31 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=86.7
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC--------CCCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~--------~~pkp~~l~~~l~~l~~~~~~ 214 (274)
..++|||+.++|+.-..+++|+||++...+...|++ +|+..+|+.|++++ .||+|+++.++++++|++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999943378999999999999999996 99999999999864 279999999999999999999
Q ss_pred EEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 215 LHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
++||||+..|+++|++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA~~----~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKA----LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHH----cCCEEeeC
Confidence 9999999999999998 99999876
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=197.85 Aligned_cols=205 Identities=18% Similarity=0.186 Sum_probs=143.7
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++||||+|||||||.+-...+...+++++ |++.. .+. .+...|.+....+ ..+...
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~ 58 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEY------GIEIS--------DEE------IRELHGGGIARII--DLLRKL 58 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHHCCChHHHH--HHHHHH
Confidence 5799999999999999999999999999999 44321 112 3334454432222 222110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
.. +... ...... -..+++.. .......+++|||.++|+ ++
T Consensus 59 ~~----------~~~~-------------------~~~~~~---~~~~~~~~-----~~~~~~~~~~pGv~~~l~~L~~~ 101 (221)
T COG0637 59 AA----------GEDP-------------------ADLAEL---ERLLYEAE-----ALELEGLKPIPGVVELLEQLKAR 101 (221)
T ss_pred hc----------CCcc-------------------cCHHHH---HHHHHHHH-----HhhhcCCCCCccHHHHHHHHHhc
Confidence 00 0000 000000 00011111 112334689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++++||.++..++.+|+. +|+..||+.++.++ .||+|++++++.+++|++|++||.|+||.+.|++|++
T Consensus 102 ~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a--- 177 (221)
T COG0637 102 GIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKA--- 177 (221)
T ss_pred CCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHH---
Confidence 899999999999999999996 99999999988754 4699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCC--hHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNT--PKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~--~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
|||.+|++.-+... ...+..... +..+.++..+..
T Consensus 178 -AGm~vv~v~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 214 (221)
T COG0637 178 -AGMRVVGVPAGHDRPHLDPLDAHGA--DTVLLDLAELPA 214 (221)
T ss_pred -CCCEEEEecCCCCccccchhhhhhc--chhhccHHHHHH
Confidence 99999999986543 223333333 366666666654
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=196.32 Aligned_cols=194 Identities=14% Similarity=0.094 Sum_probs=138.0
Q ss_pred cCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccccccccc
Q 024003 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLPSLRKS 88 (274)
Q Consensus 9 lDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~~~~~~ 88 (274)
|||||+||.+.+..+++.+++++ |++.. .+. ++.++|......+ ...+...
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~G~~~~~~~-~~~~~~~-------- 51 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARY------GKTFD--------WSL------KAKMMGKKAIEAA-RIFVEES-------- 51 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHccCCCHHHHH-HHHHHHh--------
Confidence 79999999999999999999998 44321 123 4557787665433 1222110
Q ss_pred ccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEc
Q 024003 89 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 165 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvT 165 (274)
+.+.+ ...+++.+ .++.+...+ .....+||||.++|+ ++|++++|+|
T Consensus 52 ----~~~~~------------------~~~~~~~~----~~~~~~~~~----~~~~~l~~gv~e~l~~L~~~g~~~~i~S 101 (220)
T PLN02811 52 ----GLSDS------------------LSPEDFLV----EREAMLQDL----FPTSDLMPGAERLVRHLHAKGIPIAIAT 101 (220)
T ss_pred ----CCCCC------------------CCHHHHHH----HHHHHHHHH----HhhCCCCccHHHHHHHHHHCCCcEEEEe
Confidence 00000 01111111 122222111 124689999999999 7899999999
Q ss_pred CCchHHHH-HHHHHHhCCCCCCceEecCC------CCCcHHHHHHHHhhCC---CCCCcEEEEcCChhHHHHhhccCccC
Q 024003 166 SNQSRFVE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 166 nK~~~~~~-~iL~~~~gl~~~f~~v~g~~------~~pkp~~l~~~l~~l~---~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
|++..... .+++ +.++..+|+.+++++ .||+|+++..++++++ ++|++|+||||+..|+++|++ |
T Consensus 102 ~~~~~~~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~----a 176 (220)
T PLN02811 102 GSHKRHFDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN----A 176 (220)
T ss_pred CCchhhHHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH----C
Confidence 99876444 4555 367888999999866 2699999999999996 999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|+++|+|.||+.+...+ ..|+.++.++.+|.
T Consensus 177 G~~~i~v~~~~~~~~~~----~~~d~vi~~~~e~~ 207 (220)
T PLN02811 177 GMSVVMVPDPRLDKSYC----KGADQVLSSLLDFK 207 (220)
T ss_pred CCeEEEEeCCCCcHhhh----hchhhHhcCHhhCC
Confidence 99999999998765433 25778999888763
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=195.68 Aligned_cols=85 Identities=15% Similarity=0.088 Sum_probs=77.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~---~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
.+.|++.++|+ ++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++..+++++|++|++|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 45566689998 68999999999999999999996 999999999998653 699999999999999999999999
Q ss_pred cCChhHHHHhhc
Q 024003 219 EDRLATLKNVIK 230 (274)
Q Consensus 219 GDs~~Di~aA~~ 230 (274)
||+.+|+++|++
T Consensus 185 GD~~~Di~aA~~ 196 (197)
T TIGR01548 185 GDTVDDIITGRK 196 (197)
T ss_pred eCCHHHHHHHHh
Confidence 999999999986
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-26 Score=198.93 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=94.8
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++|||+.++|+ ++|++++|+||++...++..+++ +|+..+|+.|++++ .||+|++++++++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 34789999999999 78999999999999999999995 99999999999865 369999999999999999999
Q ss_pred EEEEcCChhHHHHhhccCccCCCc-EEEEeCCCCChH
Q 024003 215 LHFVEDRLATLKNVIKEPELDGWN-LYLVDWGYNTPK 250 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~Agv~-~i~v~wGy~~~~ 250 (274)
|+|||||..|+++|++ |||+ +++|++|.+...
T Consensus 169 ~l~igDs~~di~aA~~----aG~~~~~~v~~~~~~~~ 201 (224)
T PRK14988 169 TLFIDDSEPILDAAAQ----FGIRYCLGVTNPDSGIA 201 (224)
T ss_pred EEEEcCCHHHHHHHHH----cCCeEEEEEeCCCCCcc
Confidence 9999999999999998 9998 689999986543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=191.59 Aligned_cols=92 Identities=17% Similarity=0.239 Sum_probs=83.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||++.. .+..|++ +|+..+|+.|++++ .||+|+++.++++++|++|++++
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 589999999999 689999999999876 4788996 99999999999865 36999999999999999999999
Q ss_pred EEcCCh-hHHHHhhccCccCCCcEEE
Q 024003 217 FVEDRL-ATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 217 ~VGDs~-~Di~aA~~~~~~Agv~~i~ 241 (274)
||||+. +|+++|++ +|+.+|+
T Consensus 182 ~IgD~~~~Di~~A~~----aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARA----AGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHH----cCCeeeC
Confidence 999997 89999998 8998873
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=184.45 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=90.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.|++++ .||+|+++.++++++|++|++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 579999999999 67999999999999999999996 99999999999865 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
||||+.+|+++|++ +|+++|+|.-+
T Consensus 170 ~vgD~~~Di~~A~~----~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKK----FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHH----CCCcEEEecCC
Confidence 99999999999998 99999999764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.8e-25 Score=189.37 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=91.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~--~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~ 213 (274)
..++|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4689999999999 6899999999997654 4444553 68888999999764 36999999999999999999
Q ss_pred cEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 214 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
+|+||||+..|+++|++ +|+++|+|.++....++|..
T Consensus 171 ~~l~i~D~~~di~aA~~----aG~~~i~v~~~~~~~~~l~~ 207 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAA----LGITTIKVSDEEQAIHDLEK 207 (211)
T ss_pred HeEEEcCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHH
Confidence 99999999999999998 99999999887666665554
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=179.55 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=88.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+.+..+++++|++|+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4689999999999 59999999999999999999996 99999999999764 3699999999999999999999
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
+||||+..|+++|++ +|+++|+|
T Consensus 154 ~~vgD~~~d~~~A~~----~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKE----AGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHH----TTSEEEEE
T ss_pred EEEeCCHHHHHHHHH----cCCeEEeC
Confidence 999999999999998 99999986
|
... |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=191.79 Aligned_cols=99 Identities=9% Similarity=-0.013 Sum_probs=85.6
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHHhCCCCCCceEecCCC--CCcHHHHHHHHhhCCCC
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK----~~~~~~~iL~~~~gl~~~f~~v~g~~~--~pkp~~l~~~l~~l~~~ 211 (274)
...+.++||+.|+|+ ++|++++||||| ++..++.++++ +|+..+|+.++|++. +|||++. .+++++++
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC-
Confidence 345789999999999 899999999998 88899999995 999999999999764 2556555 45667776
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
++||||+.+|+.+|++ ||+++|+|+|||++.
T Consensus 187 ---~i~vGDs~~DI~aAk~----AGi~~I~V~~g~~s~ 217 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKE----AGARGIRILRASNST 217 (237)
T ss_pred ---eEEEeCCHHHHHHHHH----CCCCEEEEEecCCCC
Confidence 6999999999999998 999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=167.41 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=78.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC---CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~---~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
...++||+.++|+ ++|++++|+||++...+...++. + +..+|+.+++.+ .||+|+++.+++++++++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3467899999999 68999999999999999999995 7 888999999865 3699999999999999999 999
Q ss_pred EEcCChhHHHHhhc
Q 024003 217 FVEDRLATLKNVIK 230 (274)
Q Consensus 217 ~VGDs~~Di~aA~~ 230 (274)
||||+..|+++|++
T Consensus 139 ~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 139 HVGDNLNDIEGARN 152 (154)
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999999997
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-22 Score=173.35 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=93.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||++.......+..+.++..+|+.|++++ .||+|++++.+++++|++|++|+
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 368999999999 68999999999999988877764247888999999865 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHH
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 253 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~ 253 (274)
||||+..|+++|++ +|+.+|+++++..-.+.|+
T Consensus 163 ~vgD~~~di~aA~~----aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 163 FFDDNADNIEAANA----LGITSILVTDKQTIPDYFA 195 (199)
T ss_pred EeCCCHHHHHHHHH----cCCEEEEecCCccHHHHHH
Confidence 99999999999998 9999999999876665554
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=171.04 Aligned_cols=120 Identities=18% Similarity=0.334 Sum_probs=93.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC--CCCce---------EecCC-------CCCcHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 202 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~--~~f~~---------v~g~~-------~~pkp~~l~ 202 (274)
.++|||+.++|+ ++|++++|+||+.+..++.+++. +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 78999999999999999999996 9996 35532 33322 137999999
Q ss_pred HHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 203 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 203 ~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.++++++. ++++||||+.+|+.+|++ +|+.++ +.||+....+.... .|++++.++.+|.+.|
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~----~~~~~~-~~~~~~~~~~~~~~--~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKP----GGADLF-IGYGGVQVREAVAA--KADWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhc----CCCCEE-EecCCCccCHHHHh--cCCEEECCHHHHHHhh
Confidence 99998875 689999999999999886 677765 44665433333333 4679999999997754
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=167.17 Aligned_cols=93 Identities=22% Similarity=0.247 Sum_probs=85.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..++++++++|++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 689999999999 6899999999999998 777775 99999999998754 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEE
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
||||+..|+++|++ +|+++|+|
T Consensus 162 ~vgD~~~di~aA~~----~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKA----AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHH----cCCEEEeC
Confidence 99999999999998 99999975
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=168.77 Aligned_cols=122 Identities=23% Similarity=0.217 Sum_probs=98.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecC-----C----CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~-----~----~~p 196 (274)
..+|||+.++|+ ++|++++|+||++. .....++++ +|+ +|+.+++. + .||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCC
Confidence 468999999999 78999999999973 445567775 777 46766632 1 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+++.++++++|++|++++||||+.+|+++|++ +|+++|+|.||+... .+....+.|++++.++.++...|
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~----aG~~~i~v~~g~~~~-~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA----AGVTPVLVRTGKGVT-TLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH----CCCeEEEEcCCCCch-hhhcccCCCceeecCHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999998754 33333322279999999987654
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=169.00 Aligned_cols=83 Identities=18% Similarity=0.195 Sum_probs=76.7
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 143 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 143 ~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
...+|||+.++|+ +++|+||++....+..+++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3579999999997 5899999999999999996 99999999988865 3699999999999999999999999
Q ss_pred cCChhHHHHhhc
Q 024003 219 EDRLATLKNVIK 230 (274)
Q Consensus 219 GDs~~Di~aA~~ 230 (274)
||+..|+++|++
T Consensus 163 gD~~~Di~~A~~ 174 (175)
T TIGR01493 163 AAHQWDLIGARK 174 (175)
T ss_pred ecChhhHHHHhc
Confidence 999999999985
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-21 Score=163.50 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=89.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHHhCCC---------CCCceEecCCCC----CcHHHHHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 205 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK-~~~~~~~iL~~~~gl~---------~~f~~v~g~~~~----pkp~~l~~~l 205 (274)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .+|+.+++++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 799999999999 99999999995 9998 999999987632 3445555555
Q ss_pred hhC--CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHH
Q 024003 206 KKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 252 (274)
Q Consensus 206 ~~l--~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l 252 (274)
+.+ +++|++|+|||||..|+++|++ ||+++++|+||+.-.+.+
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~----aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWG----YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHH----hCCEEEEcCCCccHHHHH
Confidence 555 7999999999999999999998 999999999999655443
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=157.20 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=91.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE------------ecCC--CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLG--TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v------------~g~~--~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|.. .+|||+++..+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 579999999999 68999999999999999999996 9998888532 2211 1379999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHhhc
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 273 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~~~ 273 (274)
+++++|++|+||||+.+|+.+|++ ||+++ .|+ ..+.+..+ +++++. ++.++...|
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~----ag~~i---~~~--~~~~~~~~---a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKA----AGLGI---AFN--AKPKLQQK---ADICINKKDLTDILPLL 219 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHh----CCCeE---EeC--CCHHHHHh---chhccCCCCHHHHHhhC
Confidence 999999999999999999999998 88864 333 33445432 346655 556665543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=157.23 Aligned_cols=123 Identities=20% Similarity=0.184 Sum_probs=103.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..++||++.+.|+ .+.++++|+||-........|++ +||..+||.|+.++ .||+|++...+++++|++|++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3689999999999 22288999999999999999996 99999999999865 36999999999999999999999
Q ss_pred EEcCChhHH-HHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRLATL-KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~~Di-~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+.... .+|++ +||.+|++.-+.... ......|++.+.++.++...+
T Consensus 176 ~VgD~~~~di~gA~~----~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 176 FVGDSLENDILGARA----LGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred EECCChhhhhHHHHh----cCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 999987655 99997 999999887775443 222256889999999987654
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-20 Score=159.46 Aligned_cols=117 Identities=13% Similarity=0.116 Sum_probs=87.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe---------cCCCCCcHHHHHHHHhhCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~---------g~~~~pkp~~l~~~l~~l~~ 210 (274)
..++|||+.++|+ ++ ++++|+||+...+++.++++ +|+..+|+..+ |.+ .++|+....++++++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 3679999999999 55 99999999999999999996 99988875432 222 2455555666667777
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCc-eeechhHHHhhc
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQLSDFCTKL 273 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~-~~~~~~~~~~~~ 273 (274)
.+++++|||||.+|+.++++ ||+ +|.|++. +..... .|+. ++.++.+|.+.|
T Consensus 143 ~~~~~v~iGDs~~D~~~~~a----a~~---~v~~~~~--~~~~~~--~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGE----ADA---GILFRPP--ANVIAE--FPQFPAVHTYDELLAAI 195 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHh----CCC---CEEECCC--HHHHHh--CCcccccCCHHHHHHHH
Confidence 78899999999999999997 675 4456653 233322 3445 899999886554
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=159.49 Aligned_cols=123 Identities=16% Similarity=0.069 Sum_probs=100.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHHhCCCCCCceEe-cCC----CCCcHHHHHHHHhh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 207 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~--------~~~~iL~~~~gl~~~f~~v~-g~~----~~pkp~~l~~~l~~ 207 (274)
..+||||.++|+ ++|++++|+||++.. .+...++. +|++.+|..+. +++ .||+|+++.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 579999999999 789999999999852 23445775 88876654443 322 46999999999999
Q ss_pred CCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh------HHHHhcCCCCCceeechhHHHhhc
Q 024003 208 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP------KERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 208 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~------~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++++|++|+||||+.+|+++|++ ||+.+|+|.||++.. +++ ....|+.++.++.+|...|
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~~l--~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAK----VNATTILVRTGAGYDALHTYRDKW--AHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHH----CCCeEEEEecCCCchhhhhhhccc--ccCCCcchhhCHHHHHHHH
Confidence 99999999999999999999998 999999999999763 222 2356889999999997644
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-20 Score=163.87 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=86.5
Q ss_pred cccCCCCCCCccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHHhCC--CCCCceEecCCC--CCcHHHHHHHHh
Q 024003 138 TTWIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQK 206 (274)
Q Consensus 138 ~~~~~~~~lypGv~e~L~---~~g~~laIvTn----K~~~~~~~iL~~~~gl--~~~f~~v~g~~~--~pkp~~l~~~l~ 206 (274)
+++...+.||||+.|+|+ ++|+++++||| |.+..++.+++. +|+ ..+|+.++|++. ||++.. +++
T Consensus 107 ~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~ 182 (237)
T PRK11009 107 NGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLK 182 (237)
T ss_pred hcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHH
Confidence 334556899999999999 89999999999 567789999985 999 899999998774 344432 455
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChH-HHHhcC
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK-ERAEAA 256 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~-~l~~a~ 256 (274)
++++ ++||||+.+|+++|++ ||+++|+|.|||++.- .+..+|
T Consensus 183 ~~~i----~I~IGDs~~Di~aA~~----AGi~~I~v~~G~~~~~~~~~~~g 225 (237)
T PRK11009 183 KKNI----RIFYGDSDNDITAARE----AGARGIRILRAANSTYKPLPQAG 225 (237)
T ss_pred hcCC----eEEEcCCHHHHHHHHH----cCCcEEEEecCCCCCCCcccccc
Confidence 6665 7999999999999998 9999999999998643 343333
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-20 Score=156.58 Aligned_cols=117 Identities=23% Similarity=0.242 Sum_probs=96.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecC------------C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~------------~ 193 (274)
.++||||.++|+ ++|++++|+|||+. .....++++ +++. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 479999999999 79999999999995 455567775 7776 5665421 1
Q ss_pred ---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 194 ---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 194 ---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
.||+|+++.+++++++++|++|+|||||.+||++|++ ||+++ ++|.||+...... ...|+++++|+.+|
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~----aG~~~~i~v~~g~~~~~~~---~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA----AKVKTNVLVRTGKPITPEA---ENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH----CCCcEEEEEecCCcccccc---cccCCEEeccHHHh
Confidence 3699999999999999999999999999999999998 99998 8999998743222 23578999999987
Q ss_pred H
Q 024003 270 C 270 (274)
Q Consensus 270 ~ 270 (274)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 4
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-20 Score=161.72 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=88.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC--CC--ceEecCC----CCCcHHHH----------
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 201 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~f--~~v~g~~----~~pkp~~l---------- 201 (274)
..++|||+.++|+ ++|++++|+||+...+++.+|++ + +.. .+ +..++++ .+|+|++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 3689999999999 79999999999999999999996 7 643 22 2223332 23666542
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
..++++++..+.+++|||||.+|+.+|++ ||+.++ . + ...+.......|...+.++.++.+.|
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa~~----Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAAKQ----ADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHHHH----CCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 46788889999999999999999999997 888433 2 2 11122122345778889999887665
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-20 Score=148.76 Aligned_cols=95 Identities=31% Similarity=0.323 Sum_probs=82.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhC-CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQ 211 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~--------~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l-~~~ 211 (274)
..+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++..+.+...||+|+++.++++++ +++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 368999999998 7999999999999 8899999996 99874443333323479999999999999 599
Q ss_pred CCcEEEEcC-ChhHHHHhhccCccCCCcEEEEe
Q 024003 212 GLRLHFVED-RLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 212 ~~~~l~VGD-s~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
|++++|||| +.+|+++|++ +|+++|+|.
T Consensus 103 ~~~~v~IGD~~~~Di~~A~~----~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAAKR----AGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHHHHH----CCCeEEEee
Confidence 999999999 7999999998 999999984
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=155.54 Aligned_cols=94 Identities=10% Similarity=-0.001 Sum_probs=79.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C-------------CCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~-------------~pkp~~l~~~l~ 206 (274)
.++|||+.++|+ ++|++++|+||+...+++.++++ +|+..+|+.++..+ . .+|++.+.++++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 579999999999 68999999999999999999996 99988776554321 1 134468889999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
++++++++++|||||.+|+.+|++ ||++++.-
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~----ag~~~a~~ 189 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEV----ADISISLG 189 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHh----cCCeEEEC
Confidence 999999999999999999999998 88876554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-19 Score=147.71 Aligned_cols=97 Identities=27% Similarity=0.255 Sum_probs=81.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCC--CceEec-CC----CCCcH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKV 198 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~--f~~v~g-~~----~~pkp 198 (274)
.++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ .+ .||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCH
Confidence 368999999999 79999999999984 577888995 998632 222222 22 36999
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 199 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 199 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+++.+++++++++|++|+||||+..|+++|++ +|+++|++.-|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~----~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARN----AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----CCCCEEEecCC
Confidence 99999999999999999999999999999998 99999998654
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.4e-19 Score=159.55 Aligned_cols=125 Identities=10% Similarity=0.033 Sum_probs=106.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC---C----CCCcHHHHHHHHhhCCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G----TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~---~----~~pkp~~l~~~l~~l~~~~~ 213 (274)
.-.|+++.+++. +.+++++|+|||+..+....+.. +|+..+|+.+.+. . .||+|+++..++++++++|+
T Consensus 119 ~~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~ 197 (257)
T TIGR01458 119 HFSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPE 197 (257)
T ss_pred ccCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChh
Confidence 345899999888 57899999999999988888874 8888888877753 2 26999999999999999999
Q ss_pred cEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 214 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 214 ~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+++||||+. +||.+|++ +|+++++|.||+....+.+.....|++++.++.+|.+.|
T Consensus 198 ~~~~vGD~~~~Di~~a~~----~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 198 EAVMIGDDCRDDVGGAQD----CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred hEEEECCCcHHHHHHHHH----cCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 999999996 99999998 999999999997665555555667899999999997643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-18 Score=145.29 Aligned_cols=90 Identities=23% Similarity=0.274 Sum_probs=76.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHHhCCCCCCceEecC-C---CCCcHHHHHHHH
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGL-G---TGPKVNVLKQLQ 205 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~------------~~~~iL~~~~gl~~~f~~v~g~-~---~~pkp~~l~~~l 205 (274)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++. + .||+|+++.+++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 48999999999 799999999999974 57889995 99954 445543 3 369999999999
Q ss_pred hhCC--CCCCcEEEEcCCh--------hHHHHhhccCccCCCcEEE
Q 024003 206 KKPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 206 ~~l~--~~~~~~l~VGDs~--------~Di~aA~~~~~~Agv~~i~ 241 (274)
++++ +++++++||||+. +|+++|++ ||++++.
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~----aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN----LGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH----CCCCcCC
Confidence 9999 9999999999996 69999998 8988753
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.1e-17 Score=136.90 Aligned_cols=83 Identities=13% Similarity=0.225 Sum_probs=73.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-----------------------C-C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G-P 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-----------------------~-p 196 (274)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|++.+. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 999999999997421 1 6
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
|++++.+++++. +++++||||+.+|+.+|++
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~ 180 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKL 180 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhc
Confidence 888888887754 7899999999999999997
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.7e-18 Score=140.95 Aligned_cols=99 Identities=21% Similarity=0.181 Sum_probs=86.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceE-ec----CC----CC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YG----LG----TG 195 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v-~g----~~----~~ 195 (274)
..++||||.++|+ ++|++++|+||| +...+..+|++ +|+. |+.+ +| ++ .|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCC
Confidence 3589999999999 789999999998 46788999996 9997 6644 55 23 36
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
|+|+++..++++++++|++++||||+.+|+++|++ +|+++++|++|--.
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~----aGi~~i~~~~~~~~ 152 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN----LGIRGIQYDEEELN 152 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CCCeEEEEChhhcC
Confidence 99999999999999999999999999999999998 99999999998644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=138.07 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=139.3
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
.+++||+||||+||-..++.+.+.-+..+. .+. + ... -....|.+..... +.+....
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~yg------k~~-~-------~~~------~~~~mG~~~~eaa--~~~~~~~- 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYG------KPY-P-------WDV------KVKSMGKRTSEAA--RLFVKKL- 67 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcC------CCC-h-------HHH------HHHHcCCCHHHHH--HHHHhhc-
Confidence 478999999999999999999999999993 211 1 112 2336677666543 3332100
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
.+.. +.+++.......... ......+.||+..++. ..|+
T Consensus 68 --------~dp~----------------------s~ee~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gi 109 (222)
T KOG2914|consen 68 --------PDPV----------------------SREEFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGI 109 (222)
T ss_pred --------CCCC----------------------CHHHHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCC
Confidence 0011 222222222222222 2345789999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhC-CCCCCceEec-CC-----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHHhhcc
Q 024003 160 RIYIVTSNQSRFVETLLRELAG-VTITPDRLYG-LG-----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~g-l~~~f~~v~g-~~-----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~ 231 (274)
+++++||.++...+.-+.+ ++ +-..|..++. .+ .||+|++++.+.+.+|..| +.|+.++|++.-+++|++
T Consensus 110 p~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a- 187 (222)
T KOG2914|consen 110 PVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA- 187 (222)
T ss_pred CeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh-
Confidence 9999999999999999886 55 6666766554 32 2499999999999999998 999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|||++|+|.- +.- ..+.. ..+.+.+.+.+++.
T Consensus 188 ---agm~vi~v~~-~~~-~~~~~--~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 188 ---AGMQVVGVAT-PDL-SNLFS--AGATLILESLEDFK 219 (222)
T ss_pred ---cCCeEEEecC-CCc-chhhh--hccceecccccccC
Confidence 9999999987 222 22222 23458888877765
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.1e-17 Score=141.52 Aligned_cols=111 Identities=16% Similarity=0.167 Sum_probs=91.3
Q ss_pred HHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh---CCCCCCceEecC--CCCCcHHHHHH
Q 024003 132 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGL--GTGPKVNVLKQ 203 (274)
Q Consensus 132 ~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~---gl~~~f~~v~g~--~~~pkp~~l~~ 203 (274)
|.+.|..+ ...+.+||||.++|+ ++|++++|+||++....+.++++ + ++..+|+.++.. ..||+|+++.+
T Consensus 83 w~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~ 160 (220)
T TIGR01691 83 WRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVK 160 (220)
T ss_pred HHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHH
Confidence 33344443 445789999999999 78999999999999999998884 5 455555544321 14799999999
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
+++++|++|++++||||+..|+++|++ |||++++|.|+.+.
T Consensus 161 i~~~lgv~p~e~lfVgDs~~Di~AA~~----AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 161 IAGQLGSPPREILFLSDIINELDAARK----AGLHTGQLVRPGND 201 (220)
T ss_pred HHHHhCcChhHEEEEeCCHHHHHHHHH----cCCEEEEEECCCCC
Confidence 999999999999999999999999998 99999999998643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-16 Score=148.68 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=81.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceE-ecC----C----CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G----TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v-~g~----~----~~p 196 (274)
.++||||.++|+ ++|++++|+||| +...+..++++ +|+. |+.+ ++. + .||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCCCCC
Confidence 689999999999 789999999997 46778889996 8884 6654 442 2 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeC
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~w 244 (274)
+|+++.+++++++++|++++||||+.+|+++|++ +||++|+|.-
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~----aGi~~I~v~~ 149 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN----MGIKGIRYAR 149 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEEC
Confidence 9999999999999999999999999999999998 9999999943
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.7e-17 Score=136.08 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=87.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~-~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..+|||+.++|+ ++|++++|+||++ ...++.+++. +|+..++ ...||+|+++..++++++++|++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 7888888885 8875332 2358999999999999999999999999
Q ss_pred CCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHH
Q 024003 220 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA 253 (274)
Q Consensus 220 Ds~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~ 253 (274)
|+. .|+++|++ +|+.+|+|.||+++.+.+.
T Consensus 116 Ds~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMGGNR----NGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHHHHH----cCCeEEEEccCcCCccccc
Confidence 998 69999998 9999999999998876553
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.3e-17 Score=147.35 Aligned_cols=97 Identities=21% Similarity=0.107 Sum_probs=90.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCC----------C-CCcHHHHHHHHhhC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 208 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~----------~-~pkp~~l~~~l~~l 208 (274)
..+|||+.++|+ ++|++++|+|||+...++.+++. +++.. +|+.++|.+ . ||+|++++++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 579999999999 78999999999999999999995 99986 999999975 2 59999999999999
Q ss_pred CC-CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 209 EH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 209 ~~-~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+. .+++|+||||+.+|+++|++ |||++|+|+||
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~----~Gi~~i~v~~g 298 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRR----IGLECWQVAPG 298 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHH----hCCeEEEecCC
Confidence 88 57999999999999999998 99999999999
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=132.28 Aligned_cols=171 Identities=13% Similarity=0.070 Sum_probs=108.8
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHH-HHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~-~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
|+++|||||||+ .+++..+++..+ +++ |++.. .... ++.++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~------~~~~ig~~l~~~~~~~~~---- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLP------LLPVIGLGLLVKGRAARW---- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhH------HHHHhccCcccchhhhhh----
Confidence 799999999999 667889998888 666 33322 1234 677888877543211000
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHH-H---hC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LA 157 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L-~---~~ 157 (274)
+ ...+ .-.+ ..|.+++++++..+.|++.|.+. ..+|||+.++| + ++
T Consensus 62 -----------~--~~~~-------~~~~--~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~ 111 (211)
T PRK11590 62 -----------P--MSLL-------LWGC--TFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSS 111 (211)
T ss_pred -----------h--HHHH-------HHHH--HcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhC
Confidence 0 0000 0000 01345555555556555555322 57899999999 4 47
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----C----C---CcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T----G---PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~----~---pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
|++++|||||++..++.+++. +|+.. .+.++|.+ + + -..+-+..+.+.++.+...+.+-|||.+|+
T Consensus 112 G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~ 189 (211)
T PRK11590 112 DADVWLITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDN 189 (211)
T ss_pred CCEEEEEeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccH
Confidence 999999999999999999996 88632 33445533 1 1 122333334344455667788999999999
Q ss_pred HHhhc
Q 024003 226 KNVIK 230 (274)
Q Consensus 226 ~aA~~ 230 (274)
-.-.-
T Consensus 190 pmL~~ 194 (211)
T PRK11590 190 PLLYF 194 (211)
T ss_pred HHHHh
Confidence 98875
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-17 Score=149.18 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=97.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHH-HHHHHHhCCCCCCceEe---cCC----CCCcHHHHHHHHhhCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~-~iL~~~~gl~~~f~~v~---g~~----~~pkp~~l~~~l~~l~~~~ 212 (274)
.--|||+.++|+ ++|+ ++|+|||+..... ..+.. .|+..+|+.+. |.+ .||+|+++.+++++++++|
T Consensus 142 ~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~ 219 (279)
T TIGR01452 142 HFSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDP 219 (279)
T ss_pred CCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCCh
Confidence 346999999998 4676 8999999986542 23342 56666666654 333 2699999999999999999
Q ss_pred CcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc------CCCCCceeechhHH
Q 024003 213 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA------ASMPRIQLLQLSDF 269 (274)
Q Consensus 213 ~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a------~~~P~~~~~~~~~~ 269 (274)
++++||||+ .+||++|++ ||+++|+|+||+++.+++.++ ...|++++.|+.+|
T Consensus 220 ~~~lmIGD~~~tDI~~A~~----aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHR----CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhEEEECCChHHHHHHHHH----cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999999999 599999998 999999999999999888753 35799999998875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-16 Score=143.06 Aligned_cols=71 Identities=17% Similarity=0.167 Sum_probs=67.1
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+|+++..+++++++++++++||||+. +||++|++ +|+++++|.||+++.++++.....|++++.|+.+|
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~----~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH----cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 6999999999999999999999999996 89999998 99999999999999998887778899999999987
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-15 Score=137.92 Aligned_cols=101 Identities=15% Similarity=0.184 Sum_probs=82.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc----e--------EecC--CCCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~----~--------v~g~--~~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||....+++.++++ +|++..+. . +.|. +.+||++.+.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 679999999999 79999999999999999999996 99875332 1 1111 13599999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
++|+++++|++|||+.+|+.++++ ||+. |.| +....+++
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~----AGlg---iA~--nAkp~Vk~ 297 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKA----AGLG---IAY--HAKPKVNE 297 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHH----CCCe---EEe--CCCHHHHh
Confidence 999999999999999999999997 7864 445 44455543
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=126.17 Aligned_cols=89 Identities=11% Similarity=0.038 Sum_probs=67.4
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEe-------cCC--CCCcHHHHHHHHhhCCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-------GLG--TGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~-------g~~--~~pkp~~l~~~l~~l~~ 210 (274)
.++|||+.++|+ +++++++||||+...++++++++ +|++.+|. ..+ |.. .++++..+...+++.+.
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~ 145 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 145 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence 579999999999 44469999999999999999996 99998875 222 211 23444444444455553
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
+++||||+.+|+.++++ ||++++
T Consensus 146 ---~~v~vGDs~nDl~ml~~----Ag~~ia 168 (203)
T TIGR02137 146 ---RVIAAGDSYNDTTMLSE----AHAGIL 168 (203)
T ss_pred ---CEEEEeCCHHHHHHHHh----CCCCEE
Confidence 79999999999999997 776643
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-15 Score=132.79 Aligned_cols=121 Identities=12% Similarity=0.112 Sum_probs=86.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC---ceEecCC----CCCcHHHH----------HH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 203 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f---~~v~g~~----~~pkp~~l----------~~ 203 (274)
.+++||+.++|+ ++|++++|+||+...+++.+|+. ++...++ +.+++++ .+|+|++. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 689999999999 78999999999999999999996 6544343 2344433 23766654 35
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
++++++..+++++||||+.+|+.+|++ ||+ +.+ -++. .+..+. ...|...+.+..|+.+.|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~----Ad~--~~a-r~~l-~~~~~~-~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQ----SDL--CFA-RDYL-LNECEE-LGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHh----CCe--eEe-hHHH-HHHHHH-cCCCccCcCCHHHHHHHHH
Confidence 677777788899999999999999997 776 222 2221 111222 2336677888888877663
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-14 Score=123.56 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=87.8
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCce-Ee
Q 024003 115 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 190 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~-v~ 190 (274)
|++.+++.....++.+.+. ...+|||+.++|+ ++|++++|+||+++..++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 6676666555554444322 2479999999998 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 191 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 191 g-~~-------~------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
. .+ . ++|+..+.+++++.+++++++++||||.+|+.+++. +|.+++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~----a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSL----VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHh----CCCcEE
Confidence 1 11 0 157778999999999999999999999999999997 777753
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.60 E-value=9e-16 Score=137.43 Aligned_cols=120 Identities=16% Similarity=0.197 Sum_probs=90.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~--iL-~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...|+.+...+. ++|.+ .|+||....+-.. ++ .. -.+...++.+.|.+ .||+|+++..+++++++++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 456777776666 67877 8889976543211 00 10 01111233344443 269999999999999999999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
++||||+. +||.+|++ +|+++++|.||++..+++......|++++.++.+|
T Consensus 198 ~~~VGD~~~~Di~~a~~----~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGID----AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHH----cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999996 89999998 89999999999999888877777899999998875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.7e-15 Score=120.47 Aligned_cols=85 Identities=19% Similarity=0.070 Sum_probs=79.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHHhC-------CCCCCceEecCCCCCcHHHHHHHHhhCC--CC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 211 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK-~~~~~~~iL~~~~g-------l~~~f~~v~g~~~~pkp~~l~~~l~~l~--~~ 211 (274)
++|||+.++|+ ++|++++|+||+ +...+..+++. ++ +..+|+.+++++.+|||+++.++++++| +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 69999999999 789999999999 99999999995 88 8899999999877899999999999999 99
Q ss_pred CCcEEEEcCChhHHHHhhc
Q 024003 212 GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~ 230 (274)
|++|+||||+..|+++.++
T Consensus 108 p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cceEEEECCCHhHHHHHHh
Confidence 9999999999999987763
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4e-14 Score=125.22 Aligned_cols=95 Identities=18% Similarity=0.230 Sum_probs=84.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..+..+|+.++|+ ++|..++|+||=..+.= .++.. +|+..|||.|+-+. .||+|.+...+++++++.|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 3567789999998 79999999999988765 77775 99999999999653 4699999999999999999999
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEe
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~ 243 (274)
++|||+. +|+++|++ +|+.++.|.
T Consensus 189 vhIgD~l~nD~~gA~~----~G~~ailv~ 213 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARN----LGWHAILVD 213 (237)
T ss_pred EEecCccccccHhHHH----cCCEEEEEc
Confidence 9999986 67999998 899999997
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=122.44 Aligned_cols=84 Identities=17% Similarity=0.273 Sum_probs=74.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC--CCcHHHHHHHHhhCCCCCCcEEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+++||+.++|+ ++|++++|+|+-....+..+.+. +||. +.++-++. +|.|.++.+++++++.++++++|
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 3589999999999 79999999999999999999996 9994 33333344 79999999999999999999999
Q ss_pred EcCChhHHHHhhc
Q 024003 218 VEDRLATLKNVIK 230 (274)
Q Consensus 218 VGDs~~Di~aA~~ 230 (274)
|||+.||+.++++
T Consensus 201 vGDg~nD~~al~~ 213 (215)
T PF00702_consen 201 VGDGVNDAPALKA 213 (215)
T ss_dssp EESSGGHHHHHHH
T ss_pred EccCHHHHHHHHh
Confidence 9999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.4e-14 Score=118.56 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC--------------CC--CCcHHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT--GPKVNVLKQL 204 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~--------------~~--~pkp~~l~~~ 204 (274)
..++||+.++|+ ++|++++|+|+....+++.++++ +|+..+|...+.. .. ..|+..+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 568999999999 79999999999999999999996 9998766433221 01 1577899999
Q ss_pred HhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 205 QKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 205 l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++++++++++++|||||.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhc
Confidence 99999999999999999999999874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.54 E-value=7e-15 Score=121.67 Aligned_cols=91 Identities=11% Similarity=-0.030 Sum_probs=78.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCCC--CCcHHHHHHHHhhCCCCCCcEEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
...+|||+.|+|+ .++++++|+||++...++.+|++ +++.. +|+.|++++. ..||. +.++++++|.+|++|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 3689999999999 77899999999999999999996 99965 5699998763 25555 88899999999999999
Q ss_pred EcCChhHHHHhhccCccCCCcE
Q 024003 218 VEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
|||+.+|+++|++ +||++
T Consensus 121 i~Ds~~~~~aa~~----ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPE----NLIPI 138 (148)
T ss_pred EECCHHHhhcCcc----CEEEe
Confidence 9999999999987 66654
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-14 Score=106.31 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=67.3
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+|.++..+++++++++++++||||+ ..||++|++ +|+.+|+|.+|+.+.+++......|++++.++.|+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~----~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA----AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH----TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH----cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 799999999999999999999999999 999999998 99999999999999988887778999999999875
|
... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-14 Score=133.94 Aligned_cols=111 Identities=19% Similarity=0.186 Sum_probs=92.4
Q ss_pred CCcEEEEcCCchHH-HHHHHHHHhCCCCCCceEecCC---C----CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHh
Q 024003 158 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG---T----GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 228 (274)
Q Consensus 158 g~~laIvTnK~~~~-~~~iL~~~~gl~~~f~~v~g~~---~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA 228 (274)
+-.++|+|||+... ....+. ++|+..+|+.+.+.. . ||+|.++..+++++++++++++||||+. +||.+|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 34699999999865 344445 377777888887643 1 6999999999999999999999999997 999999
Q ss_pred hccCccCCCcEEEEeCCCCChHHHHhc--CCCCCceeechhHHHhhc
Q 024003 229 IKEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 229 ~~~~~~Agv~~i~v~wGy~~~~~l~~a--~~~P~~~~~~~~~~~~~~ 273 (274)
++ +|+++|+|.||+++.+++... ...|++++.++.+|...+
T Consensus 265 ~~----aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 265 QN----GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HH----cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 98 999999999999998887653 357999999999997654
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-13 Score=115.49 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=84.1
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.|+++|++++|+|||+...++.++++ +|+..+|+. .+|||+++.++++++++++++|+||||+.+|+.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~ 109 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVME 109 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 55666689999999999999999999996 999877653 269999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+ +|++ ++|.++. +.+.. .|++++.++.
T Consensus 110 ~----ag~~-~~v~~~~---~~~~~---~a~~i~~~~~ 136 (154)
T TIGR01670 110 K----VGLS-VAVADAH---PLLIP---RADYVTRIAG 136 (154)
T ss_pred H----CCCe-EecCCcC---HHHHH---hCCEEecCCC
Confidence 8 8886 7777775 23332 3567777764
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-13 Score=133.86 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=73.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHH
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 205 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~------------~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l 205 (274)
-+||||.+.|+ ++|++++|+||++. ..+..+|++ +|+. |+.++|.+ .||+|.++.+++
T Consensus 197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~ 273 (526)
T TIGR01663 197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLK 273 (526)
T ss_pred ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHH
Confidence 37999999999 89999999999998 568899996 8884 88888764 369999999999
Q ss_pred hhCC----CCCCcEEEEcCChhHHHHhhc
Q 024003 206 KKPE----HQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 206 ~~l~----~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++++ +++++++||||+..|+++|++
T Consensus 274 ~~~~~~~~Id~~~S~~VGDaagr~~~g~~ 302 (526)
T TIGR01663 274 EEANDGTEIQEDDCFFVGDAAGRPANGKA 302 (526)
T ss_pred HhcCcccCCCHHHeEEeCCcccchHHHHh
Confidence 9984 899999999999999998876
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.6e-13 Score=112.92 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=83.6
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
+.|.++|++++|+||++...++.++++ +|+..+|+ |. ++|++.+.++++++|+++++++||||+.+|+.++++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~- 130 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK- 130 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH-
Confidence 334479999999999999999999996 99987776 33 478999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceee------chhHHHhh
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLL------QLSDFCTK 272 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~------~~~~~~~~ 272 (274)
+|++ ++|. +..++.... |++++. .+.+|...
T Consensus 131 ---aG~~-~~v~----~~~~~~~~~--a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 131 ---VGLS-VAVA----DAHPLLLPR--ADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred ---CCCe-EecC----ChhHHHHHh--CCEEecCCCCCCHHHHHHHH
Confidence 8988 4453 334444443 458876 57777653
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.1e-13 Score=113.74 Aligned_cols=90 Identities=21% Similarity=0.241 Sum_probs=74.9
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
..|+++|++++|+|||++..++.++++ +|+..+|+.+ +|||+++..+++++++++++++||||+.+|+.++++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~- 116 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR- 116 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH-
Confidence 445579999999999999999999996 9999888743 699999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhc
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
+|+.++ + + +..++++++
T Consensus 117 ---ag~~~a-m--~-nA~~~lk~~ 133 (169)
T TIGR02726 117 ---VGLAVA-V--G-DAVADVKEA 133 (169)
T ss_pred ---CCCeEE-C--c-CchHHHHHh
Confidence 665543 2 2 334555544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=117.37 Aligned_cols=107 Identities=11% Similarity=0.068 Sum_probs=76.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHHhCCCC------CCceEecCCCCCcHHHHHHHHhhCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI------TPDRLYGLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~-----~~~~~~iL~~~~gl~~------~f~~v~g~~~~pkp~~l~~~l~~l~~ 210 (274)
..|+++.++++ ..+..+.|+|+++ +...+.+++. +++.. +++.+..+ ..|+..+..+++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~--~~K~~~l~~l~~~~gi 213 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKG--NSKGKRLTQWVEAQGW 213 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCC--CChHHHHHHHHHHcCC
Confidence 35788887776 4567778888865 4556666664 66542 12222111 2689999999999999
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
+++++++|||+.||+.+++. ||+ +|.||.. .+++++. + +++..+
T Consensus 214 ~~~e~i~~GD~~NDi~m~~~----ag~---~vamgna-~~~lk~~-A--d~v~~~ 257 (272)
T PRK10530 214 SMKNVVAFGDNFNDISMLEA----AGL---GVAMGNA-DDAVKAR-A--DLVIGD 257 (272)
T ss_pred CHHHeEEeCCChhhHHHHHh----cCc---eEEecCc-hHHHHHh-C--CEEEec
Confidence 99999999999999999997 774 7888964 4566532 3 466654
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.2e-12 Score=109.19 Aligned_cols=86 Identities=16% Similarity=0.152 Sum_probs=73.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe-------cCC-------CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-------GLG-------TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~-------g~~-------~~pkp~~l~~~l~ 206 (274)
.+++||..++++ ++|++++|+|.-+..+++++.+. +|++..+.... ++. ..-|-+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 689999999999 89999999999999999999996 99986554333 221 1157789999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhc
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++|++++++++||||.||+-+=+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ 178 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEA 178 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHh
Confidence 999999999999999999999886
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.2e-12 Score=100.66 Aligned_cols=95 Identities=25% Similarity=0.218 Sum_probs=85.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----C----------------CCcHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 199 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~----------------~pkp~ 199 (274)
..+++||+.++|+ ++|++++|+||.....++..++. +|+..+|+.+++.+ . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 3689999999999 78999999999999999999996 99988888888753 2 68999
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
.+..++++++..+++++||||+.+|+.++++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~----~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKA----AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHH----cCCceeeC
Confidence 9999999999999999999999999999997 79998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-11 Score=119.50 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=79.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----CC--cHHHHHHHHhhCCCCCCcE
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GP--KVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----~p--kp~~l~~~l~~l~~~~~~~ 215 (274)
+++||+.|.|+ ++|++++|+||+++..++.++++ +|+ |+.++|.+. +| |++.+. +.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccCe
Confidence 57799999999 79999999999999999999995 887 899998762 23 444443 4444 3568
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+|||||.+|+.+++. || ..+.|.=+-+-.. ..+....|..++.+..
T Consensus 143 ~yvGDS~~Dlp~~~~----A~-~av~Vn~~~~l~~-~a~~~~~~~~~~~~~~ 188 (479)
T PRK08238 143 DYAGNSAADLPVWAA----AR-RAIVVGASPGVAR-AARALGPVERVFPPRP 188 (479)
T ss_pred eEecCCHHHHHHHHh----CC-CeEEECCCHHHHH-HHHHcCCcceecCCCc
Confidence 999999999999997 66 6677865543222 2233334555554433
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-12 Score=119.50 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=79.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHH----hCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~----~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...+|||+.++|+ ++|++++|||||++..+..+|+ + +++..+|+.+.+. .+|||+.+.++++++++.++++
T Consensus 29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcE
Confidence 3568999999999 7999999999999999999999 6 7888899998775 4699999999999999999999
Q ss_pred EEEcCChhHHHHhhc
Q 024003 216 HFVEDRLATLKNVIK 230 (274)
Q Consensus 216 l~VGDs~~Di~aA~~ 230 (274)
+||||+..|+.++++
T Consensus 107 vfidD~~~d~~~~~~ 121 (320)
T TIGR01686 107 LFIDDNPAERANVKI 121 (320)
T ss_pred EEECCCHHHHHHHHH
Confidence 999999999999997
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.5e-11 Score=104.05 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=72.1
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe
Q 024003 115 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 190 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~----~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~ 190 (274)
|.+.+++++..+.|++.|.+ .+.+|||+.++|+ ++|++++|||||++..++.+.+. .++..- +.++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcEE
Confidence 55667766666666666543 2478999999994 47999999999999999999985 665332 3344
Q ss_pred cCC----C-----C---CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 191 GLG----T-----G---PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 191 g~~----~-----~---pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
|.+ . + --++-+..+.+.++.+...+.+-|||.+|+..-.-
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHh
Confidence 432 1 1 11233333333334455677899999999998775
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-12 Score=115.52 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=79.7
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE--ecCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 215 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v--~g~~----~~pkp~~l~~~l~~l~~~-~~~~ 215 (274)
-|||+.++|+ ++|+++ |+|||+.......+.. +|...+|..+ +|.+ .||+|+++..++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 689997 9999999999888884 8888777765 5654 269999999999999875 5789
Q ss_pred EEEcCC-hhHHHHhhccCccCCCcEEEEe
Q 024003 216 HFVEDR-LATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 216 l~VGDs-~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+||||+ .+||.+|++ +|+++++|+
T Consensus 217 ~~vGD~~~~Di~~a~~----~G~~~i~v~ 241 (242)
T TIGR01459 217 LMVGDSFYTDILGANR----LGIDTALVL 241 (242)
T ss_pred EEECCCcHHHHHHHHH----CCCeEEEEe
Confidence 999999 699999998 999999986
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.4e-11 Score=118.98 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=88.8
Q ss_pred cCCCCCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 140 WIGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 140 ~~~~~~lypGv~e~L~---~~g~-~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
.....++|||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+. ..+|++.+.++ +..++++
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l----~~~~~~v 428 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKEL----REKYGPV 428 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHH----HhcCCEE
Confidence 3445789999999999 7999 9999999999999999996 99988876443 22455555544 4455799
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHhhc
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 273 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~~~ 273 (274)
+||||+.+|+.++++ || ++++|||...+ ..... +++++ +++.++...+
T Consensus 429 ~~vGDg~nD~~al~~----A~---vgia~g~~~~~-~~~~~--ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 429 AMVGDGINDAPALAA----AD---VGIAMGASGSD-VAIET--ADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEeCCHHHHHHHHh----CC---EEEEeCCCccH-HHHHh--CCEEEECCCHHHHHHHH
Confidence 999999999999998 77 59999974332 33333 34777 7888886543
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.3e-11 Score=119.53 Aligned_cols=113 Identities=22% Similarity=0.286 Sum_probs=87.0
Q ss_pred CCCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024003 141 IGANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
....++|||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+.. .+|++.+.++. ..+++++
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~----~~~~~v~ 451 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQ----EEGGVVA 451 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHH----HcCCEEE
Confidence 345789999999999 789 99999999999999999996 999887765421 25666555544 3567999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHhh
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTK 272 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~~ 272 (274)
||||+.+|+.++++ || ++|+||.++ +..... +++++. ++..+...
T Consensus 452 ~vGDg~nD~~al~~----A~---vgia~g~~~--~~~~~~--Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 452 MVGDGINDAPALAA----AD---VGIAMGAGS--DVAIEA--ADIVLLNDDLSSLPTA 498 (556)
T ss_pred EEECChhHHHHHhh----CC---EeEEeCCCC--HHHHHh--CCEEEeCCCHHHHHHH
Confidence 99999999999997 77 899999533 333333 458777 56666543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.7e-10 Score=99.65 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=86.1
Q ss_pred CCCCCccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----C--------------C---
Q 024003 143 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T--------------G--- 195 (274)
Q Consensus 143 ~~~lypGv~e~L~-----~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~--------------~--- 195 (274)
..++-||+.++++ +.|+.+.|+|.-..-+.+.+|++ .|+...|+.|+... . .
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 4688999999999 36999999999999999999995 99999998888742 1 0
Q ss_pred --CcHHHHHHHHhhC---CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 --PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 --pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
-|-.++.+.++.. |+.-.+++||||+.+|+-.+.+ ...-.++.+.=||.-.+-+.+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~---L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR---LRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc---cCCCCEEecCCCChHHHHHhc
Confidence 2456777777663 6677899999999999999876 244567889999865554544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.3e-10 Score=95.51 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=81.5
Q ss_pred CCCCccHHHHHHh-CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----------CCcHHHHHHHHhhCCCC-
Q 024003 144 NRLYPGVSDALKL-ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----------GPKVNVLKQLQKKPEHQ- 211 (274)
Q Consensus 144 ~~lypGv~e~L~~-~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----------~pkp~~l~~~l~~l~~~- 211 (274)
.+|=|-.+++|-+ +..+..|.||-+..-|.++|+. +||.+.|+.|++-+. ||.++.+..+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 4555556777772 2222899999999999999996 999999999997541 49999999999999998
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
|.+++|+.||.+.|++|++ -|+.++.|+=-
T Consensus 178 p~~t~FfDDS~~NI~~ak~----vGl~tvlv~~~ 207 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKE----VGLKTVLVGRE 207 (244)
T ss_pred cCceEEEcCchhhHHHHHh----ccceeEEEEee
Confidence 9999999999999999998 78888887543
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.1e-10 Score=107.13 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=82.1
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC-------CCCCCceEecCCCCC--------------
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGP-------------- 196 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g-------l~~~f~~v~g~~~~p-------------- 196 (274)
.....++||+.++|+ ++|++++|+|||+..+++.+++..+| +..|||.|+++..||
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 344678999999999 79999999999999999999995237 889999999875332
Q ss_pred -----cH--------------HHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeC
Q 024003 197 -----KV--------------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 197 -----kp--------------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~w 244 (274)
++ --+....+.+++.+++++||||+. .||.+|+. .+|+.+++|.-
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk---~~Gw~TvlI~p 324 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKK---KRGWRTAAIIP 324 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHH---hcCcEEEEEch
Confidence 11 024566777899999999999975 79999983 28999999954
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.1e-09 Score=97.30 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=66.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHHhCCCC-CCceEecCCC-CCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~---~~~~~iL~~~~gl~~-~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++||+.++|+ ++|++++|+||++. +.+...|++ +|+.. .++.|+..+. .+|+.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 4679999999999 89999999999884 456688886 99975 4577776543 4888888888777776
Q ss_pred EEEEcCChhHHHHhh
Q 024003 215 LHFVEDRLATLKNVI 229 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~ 229 (274)
++||||+.+|+....
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 799999999997643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.7e-10 Score=100.46 Aligned_cols=80 Identities=15% Similarity=0.058 Sum_probs=60.2
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHHhCCC----CCCceEecCCCCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHH
Q 024003 156 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKN 227 (274)
Q Consensus 156 ~~g~~laIv---TnK~~~~~~~iL~~~~gl~----~~f~~v~g~~~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~a 227 (274)
..++...++ |++....+...++. +++. .+|..|+... .|...+.++++.+|+++ +++++|||+.||+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 445554554 77777777788875 7775 4555566544 67778999999999999 999999999999999
Q ss_pred hhccCccCCCcEEEEe
Q 024003 228 VIKEPELDGWNLYLVD 243 (274)
Q Consensus 228 A~~~~~~Agv~~i~v~ 243 (274)
.+. +|+. +++.
T Consensus 223 ~~~----ag~~-vam~ 233 (273)
T PRK00192 223 LEA----ADIA-VVVP 233 (273)
T ss_pred HHh----CCee-EEeC
Confidence 997 6644 3443
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-09 Score=92.37 Aligned_cols=117 Identities=24% Similarity=0.250 Sum_probs=87.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceEe-cCC--------CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-GLG--------TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v~-g~~--------~~p 196 (274)
..+.||+.+.|. +.|++++|+||. .+.....+|+. .|. -|+.|+ +.. .||
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCC
Confidence 368899999998 899999999994 34455666775 676 355555 321 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
+|-+++++++++++++++.+||||+..||++|.| +|+..+-+.-|.+....- +... ..++.+..++.
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n----~gi~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ 173 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN----AGIKGVLVLTGIGVTTDG-AGRA--KWVFDSLAEFA 173 (181)
T ss_pred ChHHHHHHHHHhCCCccceEEecCcHHHHHHHHH----CCCCceEEEcCccccccc-cccc--ccccccHHHHH
Confidence 9999999999999999999999999999999998 788877777776543211 1111 25666666665
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-09 Score=91.47 Aligned_cols=87 Identities=20% Similarity=0.241 Sum_probs=75.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh-
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL- 222 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~- 222 (274)
=|-+.+-+. ++|+++.|+||+.+.-+....++ +|+. .|+++ .||-+..+.++++++++++++|+||||..
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchhh
Confidence 355666665 79999999999999999999996 8874 45543 37999999999999999999999999997
Q ss_pred hHHHHhhccCccCCCcEEEEe
Q 024003 223 ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 223 ~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+|+.+|+. +|+.||.|.
T Consensus 122 TDVlggnr----~G~~tIlV~ 138 (175)
T COG2179 122 TDVLGGNR----AGMRTILVE 138 (175)
T ss_pred hhhhcccc----cCcEEEEEE
Confidence 79999998 999999993
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.03 E-value=5e-09 Score=88.65 Aligned_cols=81 Identities=21% Similarity=0.400 Sum_probs=62.8
Q ss_pred CCCccHH----HHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-------------CCC----cHHH
Q 024003 145 RLYPGVS----DALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------TGP----KVNV 200 (274)
Q Consensus 145 ~lypGv~----e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-------------~~p----kp~~ 200 (274)
.+|||+. ++|+ ++|+++.|+|+.+...++.+++. +|+...+ ++|.+ ..+ |...
T Consensus 85 ~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 161 (192)
T PF12710_consen 85 KLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEA 161 (192)
T ss_dssp HHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHH
T ss_pred ccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHH
Confidence 4555555 9998 79999999999999999999995 9987521 22211 012 8888
Q ss_pred HHHH---HhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 201 LKQL---QKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 201 l~~~---l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.++ ... +.....++|||||.+|+.+.|
T Consensus 162 l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 162 LKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 8888 555 788899999999999998865
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.1e-09 Score=106.87 Aligned_cols=108 Identities=19% Similarity=0.294 Sum_probs=82.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++..- ..+|++.+.++.+ ++++++||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEEE
Confidence 4579999999999 78999999999999999999996 9996 23221 2356666665543 56899999
Q ss_pred cCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHh
Q 024003 219 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCT 271 (274)
Q Consensus 219 GDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~ 271 (274)
||+.+|+.++++ || +++.||+++. +.... +++++. ++..+..
T Consensus 473 GDg~nD~~al~~----A~---vgia~g~g~~--~a~~~--Advvl~~~~l~~l~~ 516 (562)
T TIGR01511 473 GDGINDAPALAQ----AD---VGIAIGAGTD--VAIEA--ADVVLMRNDLNDVAT 516 (562)
T ss_pred eCCCccHHHHhh----CC---EEEEeCCcCH--HHHhh--CCEEEeCCCHHHHHH
Confidence 999999999997 77 5899997653 33333 347774 6666644
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.5e-09 Score=94.97 Aligned_cols=84 Identities=20% Similarity=0.141 Sum_probs=61.4
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC------CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
.+.+.++++.+.+...+++ ++.. +..+.+.. .+ +|+..+..+++.+|++++++++|||+.||+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEV-- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh--
Confidence 4567778888888888885 6542 33333322 12 79999999999999999999999999999999997
Q ss_pred ccCCCcEEEEeCCCCChHHHHh
Q 024003 233 ELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
+|+. +++. +..+++++
T Consensus 192 --ag~~-vam~---Na~~~vk~ 207 (230)
T PRK01158 192 --AGFG-VAVA---NADEELKE 207 (230)
T ss_pred --cCce-EEec---CccHHHHH
Confidence 6664 3443 33445654
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.2e-09 Score=111.25 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=88.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..+++||+.++|+ ++|++++++|++.+..++.++++ +|++.+|..+ ...+|.+ ++++++..+++++|||
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~----~i~~l~~~~~~v~~vG 719 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAE----AIKRLQSQGRQVAMVG 719 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHH----HHHHHhhcCCEEEEEe
Confidence 4589999999999 78999999999999999999996 9997544322 1113444 5555666788999999
Q ss_pred CChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 220 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+.||+.++++ ||+ +|.||+++....+.+ ++.....++..+.+.+
T Consensus 720 Dg~nD~~al~~----Agv---gia~g~g~~~a~~~a--d~vl~~~~~~~i~~~i 764 (834)
T PRK10671 720 DGINDAPALAQ----ADV---GIAMGGGSDVAIETA--AITLMRHSLMGVADAL 764 (834)
T ss_pred CCHHHHHHHHh----CCe---eEEecCCCHHHHHhC--CEEEecCCHHHHHHHH
Confidence 99999999997 776 899998877666654 5557777888776543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.5e-08 Score=90.58 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=71.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE------ecCC---C-CCcH---------HH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------YGLG---T-GPKV---------NV 200 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v------~g~~---~-~pkp---------~~ 200 (274)
..++.||+.++|+ ++|++++|+|+-....++.+|++ +|+...+..| +..+ . +|.| .+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4689999999999 79999999999999999999996 9997677677 4322 1 2444 45
Q ss_pred HHHHHhhCC--CCCCcEEEEcCChhHHHHhh
Q 024003 201 LKQLQKKPE--HQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 201 l~~~l~~l~--~~~~~~l~VGDs~~Di~aA~ 229 (274)
++.+.+.++ ..+++||+||||.+|+.+|.
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 556788888 88999999999999999986
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.1e-09 Score=94.56 Aligned_cols=87 Identities=16% Similarity=0.329 Sum_probs=72.6
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHHhCCCC-CCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~--~iL~~~~gl~~-~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...++|||+.|+|+ ++|++++|+|||+++... ..|++ +|+.. +|+.|+++..- ..+.+.+++++++..|+++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~-~~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEI-AVQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHH-HHHHHHhhhhhccCCCceE
Confidence 34689999999998 789999999999998876 78896 99998 99999986521 1257777778888899999
Q ss_pred EEEcCChhHHHHhhc
Q 024003 216 HFVEDRLATLKNVIK 230 (274)
Q Consensus 216 l~VGDs~~Di~aA~~ 230 (274)
+||||+..|++....
T Consensus 99 ~~vGd~~~d~~~~~~ 113 (242)
T TIGR01459 99 YLLGHLENDIINLMQ 113 (242)
T ss_pred EEeCCcccchhhhcC
Confidence 999999999876543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.5e-09 Score=88.21 Aligned_cols=87 Identities=22% Similarity=0.260 Sum_probs=60.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHH
Q 024003 146 LYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQL 204 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK---~~-----------~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~ 204 (274)
++|+|.+.|+ +.|++++|+||- .. .-.+.+++. +++. +...+... .||.|-++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 5578999999 899999999986 22 344556664 6664 33333322 36999999999
Q ss_pred HhhCC----CCCCcEEEEcCC-----------hhHHHHhhccCccCCCcE
Q 024003 205 QKKPE----HQGLRLHFVEDR-----------LATLKNVIKEPELDGWNL 239 (274)
Q Consensus 205 l~~l~----~~~~~~l~VGDs-----------~~Di~aA~~~~~~Agv~~ 239 (274)
++.+. ++.++++||||+ ..|..-|.| +||++
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N----~gi~f 152 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALN----CGIKF 152 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHH----HT--E
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHH----cCCcc
Confidence 99886 488999999996 789999998 77765
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.2e-08 Score=90.69 Aligned_cols=119 Identities=21% Similarity=0.287 Sum_probs=92.4
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 209 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~------------~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~ 209 (274)
..-|.-..+.+. .+| ...|+||..... ....+++..|-. . .++| ||.|.++..+++.++
T Consensus 132 ~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~-~--~~~G---KP~~~i~~~al~~~~ 204 (269)
T COG0647 132 TLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGRE-P--TVIG---KPSPAIYEAALEKLG 204 (269)
T ss_pred CCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCc-c--cccC---CCCHHHHHHHHHHhC
Confidence 344555555555 677 668999987543 333444312222 1 3445 699999999999999
Q ss_pred CCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 210 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 210 ~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
..+++++||||+. +||.+|++ +|+.++.|.-|..+.+++......|.+++.|+.++...+
T Consensus 205 ~~~~~~~mVGD~~~TDI~~a~~----~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 205 LDRSEVLMVGDRLDTDILGAKA----AGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred CCcccEEEEcCCchhhHHHHHH----cCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 9999999999996 79999998 999999999999999888878888999999999987654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.9e-08 Score=85.79 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=59.6
Q ss_pred CCCcEEE-EcCCchHHHHHHHHHHhCCC----CCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 157 ASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 157 ~g~~laI-vTnK~~~~~~~iL~~~~gl~----~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
.++.+.+ .|++....+...+++ .++. .+|..|.+.+. .|+..+.++++.+|++++++++|||+.||+.+-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~- 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEV- 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHh-
Confidence 4555566 677888888888885 7775 45555554332 57888999999999999999999999999999997
Q ss_pred CccCCCcE
Q 024003 232 PELDGWNL 239 (274)
Q Consensus 232 ~~~Agv~~ 239 (274)
||..+
T Consensus 214 ---ag~~v 218 (221)
T TIGR02463 214 ---ADYAV 218 (221)
T ss_pred ---CCceE
Confidence 67554
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.1e-09 Score=90.39 Aligned_cols=92 Identities=8% Similarity=-0.047 Sum_probs=75.4
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCCCC--CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 145 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 145 ~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~~~--pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..=||+.|+|+ .+.+.++|.|++++.+++.++++ ++... +|+.+++.+.. .++. +.+.+..+|.+++++||||
T Consensus 42 ~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiVD 119 (162)
T TIGR02251 42 FKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIIID 119 (162)
T ss_pred EECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEEe
Confidence 44599999999 56699999999999999999996 98875 88988887642 1222 5667788899999999999
Q ss_pred CChhHHHHhhccCccCCCcEEEE
Q 024003 220 DRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v 242 (274)
|++.|+.++++ +||++..-
T Consensus 120 D~~~~~~~~~~----NgI~i~~f 138 (162)
T TIGR02251 120 NSPYSYSLQPD----NAIPIKSW 138 (162)
T ss_pred CChhhhccCcc----CEeecCCC
Confidence 99999999987 67776443
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.3e-09 Score=92.44 Aligned_cols=85 Identities=15% Similarity=0.076 Sum_probs=59.4
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecC---C---C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~---~---~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
...+.+....+.+..++++ ++... ..+.+. + . .+|...+.++++++|++++++++|||+.||+.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 183 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEV-- 183 (225)
T ss_pred eEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHh--
Confidence 3456666667778888885 76531 111111 1 1 289999999999999999999999999999999997
Q ss_pred ccCCCcEEEEeCCCCChHHHHhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
+|+. +++ | +..+++++.
T Consensus 184 --ag~~-vam--~-Na~~~~k~~ 200 (225)
T TIGR01482 184 --PGFG-VAV--A-NAQPELKEW 200 (225)
T ss_pred --cCce-EEc--C-ChhHHHHHh
Confidence 6653 444 4 334455543
|
catalyze the same reaction as SPP. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-07 Score=82.71 Aligned_cols=101 Identities=23% Similarity=0.300 Sum_probs=77.7
Q ss_pred CCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----CC-------------------
Q 024003 144 NRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG------------------- 195 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~~------------------- 195 (274)
.+.-||+.++++ +.| +-+.|||-...-|++.+|++ +|+...|+.|+... .+
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 577899999999 556 48999999999999999995 99999999888642 11
Q ss_pred -CcHHHHHHHHhhC---CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 196 -PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 196 -pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
-|-.++.++..+. |+.-++.+||||+.+|+-.-.. ..+..++--.-||--
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~---Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR---LRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh---cccCceecccCCCch
Confidence 1224555554432 6777799999999999987665 467788888888843
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.66 E-value=9e-08 Score=99.94 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=87.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C-------------------CCcHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------------GPKVNV 200 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~-------------------~pkp~~ 200 (274)
.+++||+.++++ ++|+++.++|++....+..+.++ .|+..+++.+++++ - ...|+.
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 378999999999 89999999999999999999996 99987766544321 0 145554
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHh
Q 024003 201 LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCT 271 (274)
Q Consensus 201 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~ 271 (274)
=..+.+.++...+.+.||||+.||+.+.++ |+ ||+.||++ ..+..... +|+++ +++.++..
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~----Ad---VGia~g~~-g~~va~~a--aDivl~dd~~~~i~~ 668 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKL----AD---IGVAMGQT-GTDVAKEA--ADMILTDDDFATILS 668 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHh----CC---eeEecCCC-cCHHHHHh--cCEEEcCCCHHHHHH
Confidence 455555555455789999999999999998 76 69999975 33444333 45888 45777654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.2e-07 Score=84.17 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=59.7
Q ss_pred hCCCcEEEEcCCchHHHH-HHHHHHhCCCCCCceE---ecCC----CCCcHHHHHHHHhhCCCCCCcE-EEEcCCh-hHH
Q 024003 156 LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRL---YGLG----TGPKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATL 225 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~-~iL~~~~gl~~~f~~v---~g~~----~~pkp~~l~~~l~~l~~~~~~~-l~VGDs~-~Di 225 (274)
++|-...|+||++.-... .... +.+...+|+.+ .|.. .||+|+++..++++++.+++++ +||||+. +||
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~-~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRF-RPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcE-eecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 455356788997742111 0111 12333333322 2322 2699999999999999998887 9999998 899
Q ss_pred HHhhccCccCCCcEEEEeCC
Q 024003 226 KNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~wG 245 (274)
.+|++ +|+++++|+||
T Consensus 221 ~~A~~----~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGAKN----AGFDTLLVLTG 236 (236)
T ss_pred HHHHH----CCCcEEEEecC
Confidence 99998 99999999998
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.3e-07 Score=75.21 Aligned_cols=99 Identities=20% Similarity=0.285 Sum_probs=70.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHHhCCC----------CCCceEecCCCCCcHHHHHHHHhhC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKKP 208 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvT-nK~~~~~~~iL~~~~gl~----------~~f~~v~g~~~~pkp~~l~~~l~~l 208 (274)
..++||+|.+.|. ++|+++||+| +...+.|+.+|+. +++. .+|+.+-=. .++|...+..+.++.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~t 120 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRKT 120 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHhc
Confidence 3689999999999 7999999999 4556799999996 9999 777763211 237889999999999
Q ss_pred CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 209 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
|++.++++|+.|....++...+ -||.|+.|.-|-.
T Consensus 121 gI~y~eMlFFDDe~~N~~~v~~----lGV~~v~v~~Glt 155 (169)
T PF12689_consen 121 GIPYEEMLFFDDESRNIEVVSK----LGVTCVLVPDGLT 155 (169)
T ss_dssp ---GGGEEEEES-HHHHHHHHT----TT-EEEE-SSS--
T ss_pred CCChhHEEEecCchhcceeeEe----cCcEEEEeCCCCC
Confidence 9999999999999999999987 8999999998864
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.2e-07 Score=90.81 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=82.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
.+++||+.++|+ ++|++++++|++....++.+.++ +|++.++. ....-|++.+.++.+ +.+++||||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~-----~~~v~mvGD 636 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQ-----HAPLAMVGD 636 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhc-----CCCEEEEEC
Confidence 589999999999 78999999999999999999996 99964332 111136666665432 357999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+.||+.+.++ |+ ||+.||+++....+. ++.-....++..|...
T Consensus 637 giNDapAl~~----A~---vgia~g~~~~~a~~~--adivl~~~~l~~l~~~ 679 (741)
T PRK11033 637 GINDAPAMKA----AS---IGIAMGSGTDVALET--ADAALTHNRLRGLAQM 679 (741)
T ss_pred CHHhHHHHHh----CC---eeEEecCCCHHHHHh--CCEEEecCCHHHHHHH
Confidence 9999999997 66 899999877655444 3433444566666543
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.7e-07 Score=85.71 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=59.6
Q ss_pred CCcHHHHHHHHhhC--------CC-----CCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCC
Q 024003 195 GPKVNVLKQLQKKP--------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 260 (274)
Q Consensus 195 ~pkp~~l~~~l~~l--------~~-----~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~ 260 (274)
||+|.++..+++.+ +. ++++++||||+. +||.+|++ +|+.++.|.+|-.+.++. .....|+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~----~G~~silV~tG~~~~~~~-~~~~~p~ 307 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN----YGWFSCLVKTGVYNGGDD-LKECKPT 307 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh----CCceEEEecccccCCCCC-CCCCCCC
Confidence 69999999988777 43 447999999998 99999998 899999999994333332 2345689
Q ss_pred ceeechhHHHhhc
Q 024003 261 IQLLQLSDFCTKL 273 (274)
Q Consensus 261 ~~~~~~~~~~~~~ 273 (274)
+++.|+.++...|
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999998765
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.6e-07 Score=77.77 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=67.7
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCC
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~-------~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~ 210 (274)
....+|+||+.|+|+ +.|..+.++|+.+. +.+..-|++|||...+-..+++++ |. .++.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~--------~v~~ 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT--------LVGG 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG--------GC--
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC--------eEec
Confidence 345689999999999 78877777776654 356677887676544445566543 21 2233
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+ ++|.|++.-+..+.+ +|+++|....-|+.... .-..+.|+.++...
T Consensus 138 D----vlIDD~~~n~~~~~~----~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 138 D----VLIDDRPHNLEQFAN----AGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp S----EEEESSSHHHSS-SS----ESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred c----EEecCChHHHHhccC----CCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 3 999999999998876 89999999999976533 34677787777543
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.9e-07 Score=71.35 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=68.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhC------CCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l------~~~~~ 213 (274)
...+||.|.++|. +.|+-++.+|=....-+.+.|.. +++..||+.++-....-|-.++.+++..+ .++|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 3689999999999 79999999998888888899997 99999999888642212335777766654 47899
Q ss_pred cEEEEcCChhHHHHhhc
Q 024003 214 RLHFVEDRLATLKNVIK 230 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~ 230 (274)
+++|+.|+..-+.--..
T Consensus 118 ~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 118 EIVYLDDRRIHFGNIWE 134 (164)
T ss_pred eEEEEecccccHHHHHH
Confidence 99999999876655444
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.5e-06 Score=76.68 Aligned_cols=119 Identities=23% Similarity=0.256 Sum_probs=86.6
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHH--------------HHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhh
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRF--------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKK 207 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~--------------~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~ 207 (274)
+--|+-....+. +.---+.|+||-..-+ +..+-.. .| .=-.|+| ||.+.++..++++
T Consensus 164 hfsy~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~-t~---R~P~v~G---KP~~~m~~~l~~~ 236 (306)
T KOG2882|consen 164 HFSYPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFA-TG---RQPIVLG---KPSTFMFEYLLEK 236 (306)
T ss_pred ccCHHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHH-hc---CCCeecC---CCCHHHHHHHHHH
Confidence 344666666666 4444577899877622 1111110 11 1112222 5999999999999
Q ss_pred CCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhc----CCCCCceeechhHHHhhc
Q 024003 208 PEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 208 l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a----~~~P~~~~~~~~~~~~~~ 273 (274)
.++.|++++|||||. .||.-|++ +|+.++.|.-|-++.++.+.+ ...||+-++++.++...+
T Consensus 237 ~~i~psRt~mvGDRL~TDIlFG~~----~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 237 FNIDPSRTCMVGDRLDTDILFGKN----CGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred cCCCcceEEEEcccchhhhhHhhc----cCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 999999999999997 69999998 899999999999988877665 557999999999886543
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.5e-06 Score=76.54 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=42.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. +|.-| +..+++++.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~---~vAm~-NA~~~vK~~ 247 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY----AGV---GVAMG-NAIPSVKEV 247 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh----CCc---eEEec-CccHHHHHh
Confidence 88999999999999999999999999999999997 664 44445 334556553
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.6e-06 Score=77.67 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=42.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||.. +++ | +..+++++.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~----ag~~-vAm--~-NA~~~vK~~ 241 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSM----AGKG-CIM--G-NAHQRLKDL 241 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHH----cCCC-eee--c-CCcHHHHHh
Confidence 78999999999999999999999999999999997 6653 444 4 334556553
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.1e-05 Score=67.59 Aligned_cols=85 Identities=19% Similarity=0.387 Sum_probs=68.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC--C------Cc---eEecCC-------CCCcHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------PD---RLYGLG-------TGPKVNVL 201 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~------f~---~v~g~~-------~~pkp~~l 201 (274)
..++=|||+|+.. ++|.+++++|.--..++..+-.+ +||.. . |+ ...|.+ ++-|++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 4678899999998 89999999999999999999997 99974 1 11 122212 23789999
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
..+.+ +..-..++||||..+|+++...
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCCc
Confidence 98887 7777899999999999997653
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.6e-06 Score=72.56 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=64.1
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCC-CCC-ceEecCCC--CCcHHHHHHHHhhCCCCCCcE
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~-~~f-~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..+++|||+.++|+ .+++.++|+|||++.+|..+++. ++.. .+| +.|+|.+. ++...-|. .-++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~---~i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLL---RLFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHH---HHcCCCcccE
Confidence 34789999999999 67799999999999999999996 9988 488 78888653 22222222 2246788899
Q ss_pred EEEcCChhHHHHhh
Q 024003 216 HFVEDRLATLKNVI 229 (274)
Q Consensus 216 l~VGDs~~Di~aA~ 229 (274)
++|.|++.=...-.
T Consensus 131 vivDd~~~~~~~~~ 144 (156)
T TIGR02250 131 VIIDDREDVWPWHK 144 (156)
T ss_pred EEEeCCHHHhhcCc
Confidence 99999985554433
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.28 E-value=7.2e-06 Score=69.69 Aligned_cols=106 Identities=16% Similarity=0.211 Sum_probs=75.2
Q ss_pred HHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh---CCCCCCceEecCCCC--CcHHHHHH
Q 024003 132 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLGTG--PKVNVLKQ 203 (274)
Q Consensus 132 ~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~---gl~~~f~~v~g~~~~--pkp~~l~~ 203 (274)
|..-|+.+-. ...+||.+.+.|+ ++|+++.|-|+-+-..-+-+.. |- .|..+|+..+....+ .......+
T Consensus 91 Wa~Gy~sgel-kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~KrE~~SY~k 168 (229)
T COG4229 91 WAHGYESGEL-KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGKKRESQSYAK 168 (229)
T ss_pred HHhccccCcc-ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeeccccccccchhHHH
Confidence 3344444433 4689999999999 8999999999987664443333 21 223334333322222 33456788
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+....|++|.+++|+-|.+.-+.||+. +|+.++++.
T Consensus 169 Ia~~iGl~p~eilFLSDn~~EL~AA~~----vGl~t~l~~ 204 (229)
T COG4229 169 IAGDIGLPPAEILFLSDNPEELKAAAG----VGLATGLAV 204 (229)
T ss_pred HHHhcCCCchheEEecCCHHHHHHHHh----cchheeeee
Confidence 889999999999999999999999998 899888764
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.4e-06 Score=75.97 Aligned_cols=51 Identities=14% Similarity=0.039 Sum_probs=41.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
.|-..+..+++.+|+++++++.|||+.||+.+=+. +|. ++++ | +..+++++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~-~vAm--~-Na~~~vK~ 238 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS----VGR-GFIM--G-NAMPQLRA 238 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH----cCC-ceec--c-CChHHHHH
Confidence 78999999999999999999999999999999997 663 2344 4 34455554
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.4e-06 Score=76.21 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=42.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|-..+..+++.++++++++++|||+.||+.+.+. +|+. |..| +..+++++.
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----~~~~---~a~~-na~~~~k~~ 239 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEA----AGYG---VAMG-NADEELKAL 239 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHh----CCce---eEec-CchHHHHHh
Confidence 78999999999999999999999999999999997 7754 3334 334555543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.15 E-value=8.3e-06 Score=72.03 Aligned_cols=41 Identities=10% Similarity=-0.050 Sum_probs=34.5
Q ss_pred CcHHHHHHHHhhCCC--CCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 196 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 196 pkp~~l~~~l~~l~~--~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
.|+..+..+++.+++ ++.++++|||+.||+.+-+. +|++++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~----ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEV----VDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHh----CCCcEe
Confidence 788888888888865 67799999999999999997 776643
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.9e-05 Score=67.29 Aligned_cols=82 Identities=16% Similarity=0.282 Sum_probs=60.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC----CC---CCCce----------EecCC-C--C-CcHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG----VT---ITPDR----------LYGLG-T--G-PKVN 199 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g----l~---~~f~~----------v~g~~-~--~-pkp~ 199 (274)
.++=||..|+.+ +++++..|+|+--..++..++++ .+ +. .++.- |++.+ + + -|+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence 578899999999 89999999999999999999997 54 11 11111 11111 1 1 4666
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
.+.... -.++.++|.|||..|+.+|+.
T Consensus 151 vI~~l~----e~~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 151 VIHELS----EPNESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred hHHHhh----cCCceEEEecCCcccccHhhh
Confidence 665543 356679999999999999997
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.1e-05 Score=74.84 Aligned_cols=52 Identities=12% Similarity=-0.001 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. +|.-|-.. +++++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~----AG~---gVAMgNA~-eeVK~~ 558 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL----ASL---GVALSNGA-EKTKAV 558 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH----CCC---EEEeCCCC-HHHHHh
Confidence 89999999999999999999999999999999997 664 45556443 455543
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.7e-05 Score=81.88 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=79.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC--------Cc-------------------eEecCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT--------PD-------------------RLYGLG 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~--------f~-------------------~v~g~~ 193 (274)
.+|+||+.+.++ ++|+++.++|+.....+..+.++ .|+... ++ .|++ +
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~a-r 613 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFS-R 613 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEE-e
Confidence 368999999999 89999999999999999999996 998531 11 1222 1
Q ss_pred CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHHh
Q 024003 194 TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 271 (274)
Q Consensus 194 ~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~~ 271 (274)
..|+-=.++++.++...+.+.|+||+.||+.+-++ |++ ||.||.++ + .... .+|+++.+ +..+.+
T Consensus 614 --~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~----AdV---Gia~g~g~-~-~ak~--aAD~vl~dd~f~~i~~ 680 (917)
T TIGR01116 614 --VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK----ADI---GIAMGSGT-E-VAKE--ASDMVLADDNFATIVA 680 (917)
T ss_pred --cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHh----CCe---eEECCCCc-H-HHHH--hcCeEEccCCHHHHHH
Confidence 12322233444444456789999999999999998 774 88899553 2 3222 24588877 666543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.8e-05 Score=70.83 Aligned_cols=52 Identities=19% Similarity=0.078 Sum_probs=40.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++++|+++++++.+||+.||+.+=+. +| .+|.=|=. .++++++
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~----ag---~gvam~Na-~~~~k~~ 240 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEV----AG---LGVAMGNA-DEELKEL 240 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHh----cC---eeeeccCC-CHHHHhh
Confidence 78899999999999999999999999999999886 55 34444533 3445443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.02 E-value=6.7e-05 Score=62.73 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=55.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHH--hCCCCCCceEecCC---C--------C--C---cHHHHH
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVE---TLLREL--AGVTITPDRLYGLG---T--------G--P---KVNVLK 202 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~---~iL~~~--~gl~~~f~~v~g~~---~--------~--p---kp~~l~ 202 (274)
.||+.+++. ++|+++.++|+.+...+. ..|+.. .|.......+++.. . . | |.+.+.
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 478888887 789999999999988774 666631 12211122344321 0 1 3 455666
Q ss_pred HHHhhCCCCCCcEE-EEcCChhHHHHhhccCccCCCcE
Q 024003 203 QLQKKPEHQGLRLH-FVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 203 ~~l~~l~~~~~~~l-~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
.+++.+.-..-..+ -+|++.+|+++=++ +|++.
T Consensus 109 ~i~~~~~~~~~~f~~~~gn~~~D~~~y~~----~gi~~ 142 (157)
T smart00775 109 DIKSLFPPQGNPFYAGFGNRITDVISYSA----VGIPP 142 (157)
T ss_pred HHHHhcCCCCCCEEEEeCCCchhHHHHHH----cCCCh
Confidence 66654432222344 37889999999987 67763
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.4e-05 Score=69.89 Aligned_cols=44 Identities=11% Similarity=-0.006 Sum_probs=37.6
Q ss_pred CcHHHHHHHHhhCCCC--CCcEEEEcCChhHHHHhhccCccCCCcEEEEeC
Q 024003 196 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~--~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~w 244 (274)
.|...+.++++.++++ .+++++|||+.||+.+.+. +|.. |++.-
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~----ag~~-vam~N 221 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEV----VDLA-VVVPG 221 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHH----CCEE-EEeCC
Confidence 7888999999999999 9999999999999999997 6644 44433
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.5e-05 Score=70.53 Aligned_cols=35 Identities=9% Similarity=-0.190 Sum_probs=33.6
Q ss_pred CcHHHHHHHHhhCCC---CCCcEEEEcCChhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~---~~~~~l~VGDs~~Di~aA~~ 230 (274)
.|-..+..+++.+|+ ++++++.|||+.||+.+=+.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ 224 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDV 224 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHh
Confidence 889999999999999 99999999999999999987
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.6e-05 Score=71.20 Aligned_cols=88 Identities=15% Similarity=0.249 Sum_probs=67.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~i---L~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+|||+.|+|+ ++|+++.++||++....+.+ |++ +|+...++.|+++. ..+...+++.+..+.+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~-----~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSS-----FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehH-----HHHHHHHHhhccCCCCEEE
Confidence 478999999998 79999999999984444444 464 89887888888742 3556666666655556799
Q ss_pred EcCChhHHHHhhccCccCCCcEEE
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~ 241 (274)
|+++..+.+.+++ +|+.+++
T Consensus 117 viG~~~~~~~l~~----~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELEL----AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHH----CCCEEec
Confidence 9999999999987 7888765
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.6e-05 Score=67.21 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=72.9
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecCC--------------
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 193 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~~-------------- 193 (274)
+=|...+++. +.|++++|||=.++ ++++..|++ .+-+.-...|++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 3455666666 79999999996555 368888884 55554445555421
Q ss_pred -CCCcHHH--H--HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 194 -TGPKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 194 -~~pkp~~--l--~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.||+|++ . ++++++.|+.|++++||.|+...+++|++ .|+.++-+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~----lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK----EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH----CCCEEEEcC
Confidence 1488887 6 99999999999999999999999999998 899999886
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00011 Score=62.16 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=66.1
Q ss_pred CCCCccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCC--
Q 024003 144 NRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE-- 209 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~--~laIvTnK-------~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~-- 209 (274)
..+.|-+.+.++ +.+. ++.|+||. ....++.+-+. +|+. .+.-...|| ....++++.++
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP--~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKP--GCFREILKYFKCQ 130 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCC--ccHHHHHHHHhhc
Confidence 567788888887 4444 59999997 46777777775 8863 232223344 44444444443
Q ss_pred ---CCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCC
Q 024003 210 ---HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGY 246 (274)
Q Consensus 210 ---~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy 246 (274)
..|++++||||+. +||.+|+. .|+.+|+|+=|-
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~----~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNR----MGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhc----cCceEEEEecCc
Confidence 3599999999997 79999997 899999998773
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=2.9e-05 Score=64.56 Aligned_cols=78 Identities=23% Similarity=0.323 Sum_probs=65.4
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
.+|.+.|++++|+|.+....+++-.+. +|+..+|. |.. .|-..+.++++++++.++++.||||-.+|+-.=.+
T Consensus 45 k~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~- 117 (170)
T COG1778 45 KLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK- 117 (170)
T ss_pred HHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH-
Confidence 455589999999999999999999997 99975433 432 57889999999999999999999999999988776
Q ss_pred CccCCCcE
Q 024003 232 PELDGWNL 239 (274)
Q Consensus 232 ~~~Agv~~ 239 (274)
.|.++
T Consensus 118 ---vGls~ 122 (170)
T COG1778 118 ---VGLSV 122 (170)
T ss_pred ---cCCcc
Confidence 45553
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.2e-05 Score=69.95 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=42.4
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 148 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 148 pGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
||+.|+|+ ++|++++|+||++++.+...|++ +|+..||+.|++++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 99999999 79999999999999999999996 99999999999765
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.70 E-value=5.8e-05 Score=66.97 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=56.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHHhCCCCCCceEe-cCCC-C------CcHHHHHHHHhh-C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GLGT-G------PKVNVLKQLQKK-P 208 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~---~~~~iL~~~~gl~~~f~~v~-g~~~-~------pkp~~l~~~l~~-l 208 (274)
.++.||+.++++ ++|+++.++||.++. .+..-|.+ .|....-..+. +... . -|..-...+.++ +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence 378899999999 899999999997755 66667775 78764333333 2221 1 255555555555 3
Q ss_pred CCCCCcEEEEcCChhHHHHhh
Q 024003 209 EHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~ 229 (274)
.+ +.+|||...|+..++
T Consensus 193 ~I----i~~iGD~~~D~~~~~ 209 (229)
T PF03767_consen 193 RI----IANIGDQLSDFSGAK 209 (229)
T ss_dssp EE----EEEEESSGGGCHCTH
T ss_pred cE----EEEeCCCHHHhhccc
Confidence 34 589999999999844
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00012 Score=63.47 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=61.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCc---eEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~---~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
..++++|++....+...++. .++..++. .-+......|...+..+++++|++++++++|||+.||+.+.+. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~----a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRV----V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh----C
Confidence 44567788888888888885 77643211 1111111278899999999999999999999999999999997 6
Q ss_pred CCcEEEEeCCCCChHHHHhc
Q 024003 236 GWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a 255 (274)
|+. +++ | +..+++++.
T Consensus 183 g~~-vam--~-na~~~~k~~ 198 (215)
T TIGR01487 183 GFK-VAV--A-NADDQLKEI 198 (215)
T ss_pred CCe-EEc--C-CccHHHHHh
Confidence 644 233 3 334556554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=5.9e-05 Score=65.54 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=58.2
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChh-HHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||.|..++.+++.+|++|++++||||-.+ |+-+|++ .||+.|.|..|=-.+.+-..-...|+..++++.+-
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~----~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~A 252 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQA----CGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADA 252 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhh----hcceeEEeeccccCCcccccCCCCcchhhhhHHHH
Confidence 49999999999999999999999999876 6777776 89999999999655534445667788888777653
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.001 Score=59.13 Aligned_cols=82 Identities=17% Similarity=0.092 Sum_probs=56.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHHhCCCCCCceEecC--CCCC------cHHHHHHHHhhC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL--GTGP------KVNVLKQLQKKP 208 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~~gl~~~f~~v~g~--~~~p------kp~~l~~~l~~l 208 (274)
..++.||+.++++ ++|+++.++|+.++.. +..-|.+ .|+..+ +.++-. +... |.+.-.++.+ -
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~-~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLME-E 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHh-C
Confidence 4688999999999 7999999999999777 7777886 888765 555532 2222 3333333332 1
Q ss_pred CCCCCcEEEEcCChhHHHHhh
Q 024003 209 EHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~ 229 (274)
|.. =+..|||...|+.++.
T Consensus 195 GYr--Iv~~iGDq~sDl~G~~ 213 (229)
T TIGR01675 195 GYR--IWGNIGDQWSDLLGSP 213 (229)
T ss_pred Cce--EEEEECCChHHhcCCC
Confidence 211 1478999999997654
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00012 Score=67.00 Aligned_cols=46 Identities=20% Similarity=0.105 Sum_probs=42.5
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
=|||.|+|+ ++|++++|+|||+++.+..+|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 499999999 79999999999999999999996 99999999888764
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00032 Score=64.33 Aligned_cols=74 Identities=7% Similarity=0.026 Sum_probs=48.4
Q ss_pred EEEcCCchHHHHHHHHHHhCCC----CCCceEec------------------CCC-C-CcHHHHHHHHhhCCC--CCCcE
Q 024003 162 YIVTSNQSRFVETLLRELAGVT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRL 215 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~----~~f~~v~g------------------~~~-~-pkp~~l~~~l~~l~~--~~~~~ 215 (274)
.+-+..+... +..+++ .|+. ..|-.+.| .+. . +|-..+..+.+.+.- .+-.+
T Consensus 152 ~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~t 229 (302)
T PRK12702 152 FSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKA 229 (302)
T ss_pred eEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceE
Confidence 3336555555 777775 7775 34666666 221 1 666777666665543 34479
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEE
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~ 241 (274)
+-+|||+||+.+=.. +.+++|-
T Consensus 230 iaLGDspND~~mLe~----~D~~vvi 251 (302)
T PRK12702 230 LGIGCSPPDLAFLRW----SEQKVVL 251 (302)
T ss_pred EEecCChhhHHHHHh----CCeeEEe
Confidence 999999999999886 6666654
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0086 Score=59.03 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=63.8
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-
Q 024003 115 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG- 193 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~- 193 (274)
|++.+++++...++.++|.. ..++|...+.++++|.. +|||..++..++.++++++|++ .|+|.+
T Consensus 89 G~~~~el~~~~r~~l~~f~~---------~~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeL 154 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYA---------EDVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTEL 154 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHH---------HhcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEeccc
Confidence 55666665555555555432 23788888888766754 9999999999999997546765 344432
Q ss_pred ------------CCCcH----HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 194 ------------TGPKV----NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 194 ------------~~pkp----~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
.++++ +-+..+.+.+|.+... +..|||.+|...-.-
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHh
Confidence 11211 2233333445544333 899999999988764
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0023 Score=57.30 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=36.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChH
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 250 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~ 250 (274)
.|-..+.++++++++++++++.+|||.||+.+=. .+.+.|.| |-..++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~-----~~~~~vvV--~Na~~e 212 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLE-----GGDHGVVV--GNAQPE 212 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHC-----CSSEEEE---TTS-HH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHc-----CcCCEEEE--cCCCHH
Confidence 6889999999999999999999999999999875 45666666 534443
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0019 Score=52.35 Aligned_cols=116 Identities=10% Similarity=0.254 Sum_probs=79.7
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
....++|+.|.|++. +. +.+.|+|.-...+...+.+ ..|+.- +.|..+ .+|+.=..+++.|+-+-+.++|
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae-~~gi~~--~rv~a~---a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAE-FVGIPV--ERVFAG---ADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHH-HcCCce--eeeecc---cCHHHHHHHHHHhcCCCcEEEE
Confidence 445689999999999 56 9999999999999999999 488753 455432 3455555566666666688999
Q ss_pred EcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
|||..||+.+-++ |.+-.+-+.-+ +-++.+.. .+ |+++.++.++-.
T Consensus 99 VGnGaND~laLr~----ADlGI~tiq~e-~v~~r~l~-~A--Dvvik~i~e~ld 144 (152)
T COG4087 99 VGNGANDILALRE----ADLGICTIQQE-GVPERLLL-TA--DVVLKEIAEILD 144 (152)
T ss_pred ecCCcchHHHhhh----cccceEEeccC-CcchHHHh-hc--hhhhhhHHHHHH
Confidence 9999999999998 44443333322 22222222 12 377776666533
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00028 Score=62.89 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=53.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC---ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP---ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~---~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
.|...+..++++++..+.+++||||+.+|+.+.+.+. ..-|..++.|.+|-. ....++++.+++++...
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~--------~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK--------KTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc--------CCCceEeCCCHHHHHHH
Confidence 5679999999999999999999999999999999720 001667888886721 12245899999988765
Q ss_pred c
Q 024003 273 L 273 (274)
Q Consensus 273 ~ 273 (274)
|
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.002 Score=65.25 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=35.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEE--cCChhHHHHhhccCccCCCcEE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~V--GDs~~Di~aA~~~~~~Agv~~i 240 (274)
.|-..+..+++.+++..++++.| ||+.||+.+=+. ||.+++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~----Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET----VDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh----CCceEE
Confidence 78899999999999988888888 999999999986 776543
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0017 Score=58.96 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=51.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHHhCCCCCCceEec--C-CCCC------cHHHHHHHHhh
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYG--L-GTGP------KVNVLKQLQKK 207 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~---~~~~iL~~~~gl~~~f~~v~g--~-~~~p------kp~~l~~~l~~ 207 (274)
..++.||+.++++ ++|+++.++||.++. .+..-|.+ .|...+ +.++= . +..+ |.+.-.++.+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~- 219 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQ- 219 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHH-
Confidence 4678899999999 799999999999864 45566664 677544 43432 2 1112 2222233222
Q ss_pred CCCCCCcEEEEcCChhHHHHh
Q 024003 208 PEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 208 l~~~~~~~l~VGDs~~Di~aA 228 (274)
-|.. =+..|||..+|+.+.
T Consensus 220 eGYr--Iv~~iGDq~sDl~G~ 238 (275)
T TIGR01680 220 EGYN--IVGIIGDQWNDLKGE 238 (275)
T ss_pred cCce--EEEEECCCHHhccCC
Confidence 2221 147899999999654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0017 Score=57.71 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=60.6
Q ss_pred hCCCcEEEEcCCch-----HHHHHHHHHHhCCCCCCceEecCC-------C-CCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 156 LASSRIYIVTSNQS-----RFVETLLRELAGVTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 156 ~~g~~laIvTnK~~-----~~~~~iL~~~~gl~~~f~~v~g~~-------~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
+.-+++.+.+.+.. ......+.+ +|+. +..++++. . .+|...+..+++.+|++++++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 34567777665432 222444453 4543 23444331 1 2999999999999999999999999999
Q ss_pred hHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 223 ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 223 ~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
||+.+.+. ++..+++|. +..+++++
T Consensus 194 ND~~ml~~----~~~~~va~~---na~~~~k~ 218 (249)
T TIGR01485 194 NDIELFEI----GSVRGVIVS---NAQEELLQ 218 (249)
T ss_pred hHHHHHHc----cCCcEEEEC---CCHHHHHH
Confidence 99999996 577788883 34455554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0019 Score=55.09 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=63.9
Q ss_pred cccCCCCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHHhCCCCCCceEecCCCCCcHHHH--HHHHhhCC
Q 024003 138 TTWIGANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVL--KQLQKKPE 209 (274)
Q Consensus 138 ~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~---~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l--~~~l~~l~ 209 (274)
.+|...+-|-.=+.++++ ++|-++..+|+.... .+-+.|++.|.|...-..++.++ ||+|.-. .+.+++-+
T Consensus 107 ~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~~~ 185 (237)
T COG3700 107 NGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-KPKPGQYTKTQWIQDKN 185 (237)
T ss_pred cCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-CCCcccccccHHHHhcC
Confidence 345556667777778887 799999999976543 23344444588877766666655 3444322 22344455
Q ss_pred CCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 210 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 210 ~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
+. |+-|||.+||.+|+. ||++-|-.
T Consensus 186 ~~----IhYGDSD~Di~AAke----aG~RgIRi 210 (237)
T COG3700 186 IR----IHYGDSDNDITAAKE----AGARGIRI 210 (237)
T ss_pred ce----EEecCCchhhhHHHh----cCccceeE
Confidence 54 899999999999998 55555544
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0013 Score=58.76 Aligned_cols=68 Identities=16% Similarity=0.062 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHHHHhCCCCCCceEecCC-------CC-CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhccC
Q 024003 165 TSNQSRFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEP 232 (274)
Q Consensus 165 TnK~~~~~~~iL~~~~gl~~~f~~v~g~~-------~~-pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~ 232 (274)
+.+.......+.++ ++- -.+....++. .+ .|...|.+++ ++++++.+|| +.||+++-+.
T Consensus 152 ~~~~~~~~~~l~~~-~~~-~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~-- 222 (245)
T PLN02423 152 HNIRPKMVSVLREK-FAH-LNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFES-- 222 (245)
T ss_pred chHHHHHHHHHHHh-CCC-CcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhC--
Confidence 44555556666664 531 1233333331 12 7777777776 8999999999 7999999984
Q ss_pred ccCCCcEEEEe
Q 024003 233 ELDGWNLYLVD 243 (274)
Q Consensus 233 ~~Agv~~i~v~ 243 (274)
-|+.++.|+
T Consensus 223 --~~~~~~~~~ 231 (245)
T PLN02423 223 --ERTIGHTVT 231 (245)
T ss_pred --CCcceEEeC
Confidence 499999994
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0024 Score=62.05 Aligned_cols=94 Identities=18% Similarity=0.266 Sum_probs=66.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCC--------CCCCceEecCCCCC-------------------
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV--------TITPDRLYGLGTGP------------------- 196 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl--------~~~f~~v~g~~~~p------------------- 196 (274)
=|.+..+|+ ++|.++.++||.+-.+++.+++..+|- ..+||.|+....||
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 478888888 789999999999999999999964544 46999999643221
Q ss_pred ---c---H---------HHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEe
Q 024003 197 ---K---V---------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 197 ---k---p---------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+ + --+..+++.+|....+++||||+. .||...+. ..|.++++|-
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~---~~gWrT~~Ii 324 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKK---RHGWRTAAII 324 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHH---HH-SEEEEE-
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhcc---ccceEEEEEe
Confidence 1 0 125566777888889999999987 69999988 3799999993
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.00095 Score=58.80 Aligned_cols=93 Identities=12% Similarity=-0.019 Sum_probs=60.3
Q ss_pred CCCcEEEEcCCch----HHHHHHHHHHhCCCCCCceEecC----C---C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhH
Q 024003 157 ASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGL----G---T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 224 (274)
Q Consensus 157 ~g~~laIvTnK~~----~~~~~iL~~~~gl~~~f~~v~g~----~---~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 224 (274)
..+++.+.+.... ......+++ ++.. +..++++ + . .+|+..+..+++++|++++++++|||+.||
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 3466776654321 223445553 4432 3344443 1 1 299999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCC
Q 024003 225 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 260 (274)
Q Consensus 225 i~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~ 260 (274)
+.+.+. +| +++.+|- ..+++++....|.
T Consensus 188 ~~ml~~----~~---~~iav~n-a~~~~k~~a~~~~ 215 (236)
T TIGR02471 188 EEMLRG----LT---LGVVVGN-HDPELEGLRHQQR 215 (236)
T ss_pred HHHHcC----CC---cEEEEcC-CcHHHHHhhcCCc
Confidence 999986 55 3444554 3455666544454
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0072 Score=61.62 Aligned_cols=89 Identities=15% Similarity=0.174 Sum_probs=65.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
++-||+.+.++ +.|+++.++|.-....+..+-++ .|++.+|..+ .+.-|-+.+... +-..+-+.|+||.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A~~---~PedK~~iV~~l----Q~~G~~VaMtGDG 512 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVAEC---KPEDKINVIREE----QAKGHIVAMTGDG 512 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEcCC---CHHHHHHHHHHH----HhCCCEEEEECCC
Confidence 67799999999 78999999999999999999997 9997543221 111344444443 3234568999999
Q ss_pred hhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 222 LATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 222 ~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
.||.-+=++ |. ||+.-|-++
T Consensus 513 vNDAPALa~----AD---VGIAMgsGT 532 (673)
T PRK14010 513 TNDAPALAE----AN---VGLAMNSGT 532 (673)
T ss_pred hhhHHHHHh----CC---EEEEeCCCC
Confidence 999988776 44 788888443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0064 Score=61.99 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=67.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
++-||+.+.++ ++|+++.++|.-....+..+-++ .|++.+ +..- +.-|-+.+....++ ...+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v----~a~~~PedK~~~v~~lq~~----g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDF----IAEATPEDKIALIRQEQAE----GKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEE----EcCCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67799999999 79999999999999999999997 999643 3322 12355666655442 346999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
..||.-+=+. |+ +|+..|-++
T Consensus 517 G~NDapAL~~----Ad---vGiAm~~gt 537 (675)
T TIGR01497 517 GTNDAPALAQ----AD---VGVAMNSGT 537 (675)
T ss_pred CcchHHHHHh----CC---EeEEeCCCC
Confidence 9999999887 55 667777444
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.002 Score=55.24 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=36.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
+|+..+.+++++++++++++++|||+.+|+.+.+. +|+.+
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV----AGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCCce
Confidence 89999999999999999999999999999999997 66554
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0077 Score=61.47 Aligned_cols=88 Identities=17% Similarity=0.221 Sum_probs=66.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
++-||+.|.++ ++|+++.++|.-....++.+-++ .|++. ++..-. .-|.+.+....+ ..+-+.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~----~G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQA----EGRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHH----cCCeEEEECC
Confidence 56799999998 79999999999999999999997 99964 343221 134455554432 3355899999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
..||.-+=++ |. ||+.-|-++
T Consensus 516 GvNDAPALa~----AD---VGIAMgsGT 536 (679)
T PRK01122 516 GTNDAPALAQ----AD---VGVAMNSGT 536 (679)
T ss_pred CcchHHHHHh----CC---EeEEeCCCC
Confidence 9999988776 43 788888444
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.025 Score=50.44 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=57.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHHhCCCCCC-ce-EecCCCCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVTITP-DR-LYGLGTGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~----~~~iL~~~~gl~~~f-~~-v~g~~~~pkp~~l~~~l~~l~~~~~ 213 (274)
.+++-||+.|+|. +.|.++.-+||..++. +..-|++ +|+...- +. ++=.+.++|..-...+-+-+ .
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~ 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----K 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhcc----c
Confidence 4689999999999 8999999999988776 6677775 7886422 22 22223346665555544423 3
Q ss_pred cEEEEcCChhHHHHhh
Q 024003 214 RLHFVEDRLATLKNVI 229 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~ 229 (274)
-+++|||...|.-...
T Consensus 195 iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 195 IVMLVGDNLDDFGDNA 210 (274)
T ss_pred eeeEecCchhhhcchh
Confidence 4699999999976543
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.018 Score=59.12 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=76.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
-++-|+..+.++ ++|+++.++|.-.+..++.+-++ +|++.++..+. +.-|.+.+.++.+ ....+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Aell---PedK~~~V~~l~~----~g~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELL---PEDKAEIVRELQA----EGRKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCC---cHHHHHHHHHHHh----cCCEEEEEeC
Confidence 467899999998 89999999999999999999997 99965433221 2246666666543 2367999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHH
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFC 270 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~ 270 (274)
..||.-+=.. | -||+.-|-++.-..+.+ | +++.+ +.++.
T Consensus 608 GINDAPALA~----A---dVGiAmG~GtDvA~eaA--D--vvL~~~dL~~v~ 648 (713)
T COG2217 608 GINDAPALAA----A---DVGIAMGSGTDVAIEAA--D--VVLMRDDLSAVP 648 (713)
T ss_pred CchhHHHHhh----c---CeeEeecCCcHHHHHhC--C--EEEecCCHHHHH
Confidence 9999877654 3 27787787654444443 3 55544 55553
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0026 Score=56.69 Aligned_cols=40 Identities=18% Similarity=0.047 Sum_probs=33.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhccCccCCCcEEEEe
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.|...+..+++. +++++.+|| +.||+.+=+. ++...++|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~----~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYND----PRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhc----CCCceEEeC
Confidence 788899999887 589999999 8999999986 556556664
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.026 Score=43.57 Aligned_cols=71 Identities=18% Similarity=0.327 Sum_probs=44.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~----~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...++||+.|+|+ ++|+++.++||.+. .++++ |+. +|+..-.+.|+.+ .......+++. .....+
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~-L~~-~Gi~~~~~~i~ts-----~~~~~~~l~~~-~~~~~v 83 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKK-LKK-LGIPVDEDEIITS-----GMAAAEYLKEH-KGGKKV 83 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHH-HHH-TTTT--GGGEEEH-----HHHHHHHHHHH-TTSSEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHH-HHh-cCcCCCcCEEECh-----HHHHHHHHHhc-CCCCEE
Confidence 3579999999999 79999999999873 33433 364 8887555666642 33444444442 234567
Q ss_pred EEEcCC
Q 024003 216 HFVEDR 221 (274)
Q Consensus 216 l~VGDs 221 (274)
.+||-.
T Consensus 84 ~vlG~~ 89 (101)
T PF13344_consen 84 YVLGSD 89 (101)
T ss_dssp EEES-H
T ss_pred EEEcCH
Confidence 777754
|
... |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.035 Score=58.39 Aligned_cols=109 Identities=16% Similarity=0.167 Sum_probs=70.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-------------------CCcHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 201 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-------------------~pkp~~l 201 (274)
.+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- +.+.|.+- .-.|+-=
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 467899999999 79999999999999999999997 999621 22333220 0122221
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.++.+.+.-..+.+.|+||+.||.-+=++ |+ ||+.-|-+ .+.....++ +++.+
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~----Ad---VGIAmg~g--tdvAk~aAD--iVLld 644 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRK----AD---VGISVDTA--ADIAKEASD--IILLE 644 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHh----CC---EEEEeCCc--cHHHHHhCC--EEEec
Confidence 22222222233568999999999998887 54 56666633 334333344 66643
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.042 Score=56.96 Aligned_cols=106 Identities=12% Similarity=0.115 Sum_probs=69.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC---ce-----------------------EecCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGT 194 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f---~~-----------------------v~g~~~ 194 (274)
.++-|++.+.++ ++|+++.++|+-....++.+-++ .|+.... +. |++.-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 367899999998 79999999999999999999997 9996410 00 222111
Q ss_pred -CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 195 -GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 195 -~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.-|.+++.. ++ -..+-+.|+||+.||.-+=++ |. ||+.-|-+ .+.....++ +++.+
T Consensus 520 Pe~K~~iV~~-lq---~~G~~VamvGDGvNDapAL~~----Ad---VGIAm~~g--tdvAkeaAD--ivLl~ 576 (755)
T TIGR01647 520 PEHKYEIVEI-LQ---KRGHLVGMTGDGVNDAPALKK----AD---VGIAVAGA--TDAARSAAD--IVLTE 576 (755)
T ss_pred HHHHHHHHHH-HH---hcCCEEEEEcCCcccHHHHHh----CC---eeEEecCC--cHHHHHhCC--EEEEc
Confidence 022333333 33 334669999999999988886 54 45555623 334333334 66543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.043 Score=57.98 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=70.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C------------------CCcHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T------------------GPKVNVL 201 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~------------------~pkp~~l 201 (274)
.+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- ..+-|.+ . .-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 367799999998 79999999999999999999997 999521 1222222 0 0123322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL 264 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~ 264 (274)
.++.+.+.-..+-+.|+||+.||.-|=++ |. ||+.-|-+ .+.....++ +++.
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~----AD---VGIAmg~g--tdvAkeaAD--iVLl 678 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRD----AD---VGISVDSG--ADIAKESAD--IILL 678 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHh----CC---EEEEeCcc--cHHHHHhcC--EEEe
Confidence 22222222234568999999999998887 44 56666623 344444444 6664
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.058 Score=48.59 Aligned_cols=101 Identities=19% Similarity=0.303 Sum_probs=71.5
Q ss_pred CccHHHHHHhCCCcEEEEcCCchHHHHH---HHHHHhCCCCCCce-----E-----e-c-CC------------CC-CcH
Q 024003 147 YPGVSDALKLASSRIYIVTSNQSRFVET---LLRELAGVTITPDR-----L-----Y-G-LG------------TG-PKV 198 (274)
Q Consensus 147 ypGv~e~L~~~g~~laIvTnK~~~~~~~---iL~~~~gl~~~f~~-----v-----~-g-~~------------~~-pkp 198 (274)
+|.+.+-|.++|+++..+|..+..+... -|++ +|++.--.. . . . .. .+ +|-
T Consensus 86 ~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG 164 (252)
T PF11019_consen 86 VPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKG 164 (252)
T ss_pred HHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccH
Confidence 3444444448999999999988765544 4554 677521111 0 0 1 11 11 788
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 199 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 199 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
++|..++.+.|..|+.+|||.|+...+....++-...||.++|..|....
T Consensus 165 ~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~ 214 (252)
T PF11019_consen 165 EVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAE 214 (252)
T ss_pred HHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchh
Confidence 99999999999999999999999988876555333589999999998643
|
The function is not known. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.078 Score=48.05 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=50.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~---~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+|||+.|+|+ ++|++++++||.+ ......-|++ +|+....+.|+. ........+++....+..+++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~t-----s~~~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFS-----SALCAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEec-----HHHHHHHHHHhhCcCCCEEEE
Confidence 468999999998 7899999999954 4344455675 888655555554 234555556654444567899
Q ss_pred EcCC
Q 024003 218 VEDR 221 (274)
Q Consensus 218 VGDs 221 (274)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9985
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.046 Score=57.77 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=70.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-------------------CCcHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 201 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-------------------~pkp~~l 201 (274)
.+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- ..+.|.+- .-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 367789999998 79999999999999999999997 999521 22223220 0123221
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.++.+.+.-...-+.|+||+.||.-|=++ |. ||+.-|-++ +.....++ +++.+
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~----AD---VGIAmg~gt--dvAkeaAD--iVLld 679 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRA----AD---IGISVDGAV--DIAREAAD--IILLE 679 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHh----CC---EEEEeCCcC--HHHHHhCC--EEEec
Confidence 22222222234568999999999998887 44 667777333 34443444 66643
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.064 Score=47.13 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=22.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g 191 (274)
++|++++|+|+++...++.+++. +++. .++.++|
T Consensus 28 ~~gi~~viaTGR~~~~v~~~~~~-l~l~-~~~~~I~ 61 (236)
T TIGR02471 28 GDAVGFGIATGRSVESAKSRYAK-LNLP-SPDVLIA 61 (236)
T ss_pred CCCceEEEEeCCCHHHHHHHHHh-CCCC-CCCEEEE
Confidence 46677777777777777777775 6664 2344444
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.11 Score=55.78 Aligned_cols=116 Identities=11% Similarity=0.058 Sum_probs=73.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC----------CceEecC-CC---------------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT----------PDRLYGL-GT--------------- 194 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~----------f~~v~g~-~~--------------- 194 (274)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+... -..++.+ +-
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 367899999999 89999999999999999999997 999531 0123322 10
Q ss_pred ----CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhH
Q 024003 195 ----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSD 268 (274)
Q Consensus 195 ----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~ 268 (274)
.-.|+-=..+.+.+.-..+-+.|+||+.||.-+=+. |+ ||+.-|.+..+ .....++ +++.+ +..
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~----Ad---VGIAmg~~gt~-vak~aAD--ivl~dd~f~~ 793 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKM----AN---VGIAMGINGSD-VAKDASD--IVLSDDNFAS 793 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHh----CC---ccEecCCCccH-HHHHhcC--EEEecCCHHH
Confidence 012221112222222234568999999999998886 54 56666754333 3222233 66654 554
Q ss_pred HH
Q 024003 269 FC 270 (274)
Q Consensus 269 ~~ 270 (274)
+.
T Consensus 794 I~ 795 (1053)
T TIGR01523 794 IL 795 (1053)
T ss_pred HH
Confidence 43
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.11 Score=55.06 Aligned_cols=112 Identities=21% Similarity=0.218 Sum_probs=74.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc-----------------------eEecCCC-CCc
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGT-GPK 197 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~-----------------------~v~g~~~-~pk 197 (274)
++-|++.++++ ++|+++.++|+-....+..+-++ .|+...-. .|++.-+ .-|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 77899999999 79999999999999999999997 99963211 2333211 133
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHh
Q 024003 198 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCT 271 (274)
Q Consensus 198 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~ 271 (274)
-+++.. +++. .+-+.|+||+.||.-|=++ |. ||+.-|-+. .+.....+ |+++. ++..+..
T Consensus 658 ~~iV~~-lq~~---g~vVam~GDGvNDapALk~----Ad---VGIAmg~~g-tdvAk~aA--DivL~dd~f~~I~~ 719 (941)
T TIGR01517 658 QLLVLM-LKDM---GEVVAVTGDGTNDAPALKL----AD---VGFSMGISG-TEVAKEAS--DIILLDDNFASIVR 719 (941)
T ss_pred HHHHHH-HHHC---CCEEEEECCCCchHHHHHh----CC---cceecCCCc-cHHHHHhC--CEEEecCCHHHHHH
Confidence 344443 3333 3468999999999999887 44 566667322 23333333 47776 5555543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.011 Score=51.22 Aligned_cols=29 Identities=28% Similarity=0.413 Sum_probs=23.4
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
|+|+|||||||+|+-..+......+++.+
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l 30 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKA 30 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHH
Confidence 78999999999998666666666676666
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.011 Score=48.67 Aligned_cols=81 Identities=16% Similarity=0.064 Sum_probs=56.9
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC-CCCCceEecCCCC---CcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl-~~~f~~v~g~~~~---pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+-||+.++|+ .+.+.++|.|+..+.+++.+++. +.- ..+|+.++..+.. .+.. .+-++.+|-+.+++|+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vvi 111 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVI 111 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEE
Confidence 356799999999 77899999999999999999996 776 4678888865421 1111 1456677778899999
Q ss_pred EcCChhHHHH
Q 024003 218 VEDRLATLKN 227 (274)
Q Consensus 218 VGDs~~Di~a 227 (274)
|.|++.-...
T Consensus 112 vDD~~~~~~~ 121 (159)
T PF03031_consen 112 VDDSPRKWAL 121 (159)
T ss_dssp EES-GGGGTT
T ss_pred EeCCHHHeec
Confidence 9999886543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.029 Score=48.45 Aligned_cols=52 Identities=17% Similarity=0.112 Sum_probs=41.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|-..+..+++.+|+++++++.|||+.||+.+-+. +|.. ++| |..+ +++++.
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~----~~~~-~am--~na~-~~~k~~ 237 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL----AGYS-VAM--GNAT-PELKKA 237 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH----SSEE-EEE--TTS--HHHHHH
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHHhh----cCeE-EEE--cCCC-HHHHHh
Confidence 78899999999999999999999999999999997 5533 344 5444 455543
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.017 Score=46.64 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.9
Q ss_pred CceEEEecCcccccC
Q 024003 2 EDLYALDFDGVICDS 16 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS 16 (274)
-|+|+||+||||+++
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 079999999999974
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.23 Score=53.15 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=34.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
+|-|++.+.++ ++|+++.++|+-....+..+.++ .|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 67899999999 89999999999999999999997 9984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.051 Score=43.55 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.1
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.33 Score=43.08 Aligned_cols=103 Identities=18% Similarity=0.196 Sum_probs=74.4
Q ss_pred HHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC-------CCCCCceEecCCCCCcHHHH
Q 024003 132 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 201 (274)
Q Consensus 132 ~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g-------l~~~f~~v~g~~~~pkp~~l 201 (274)
|..-|...-+ ....|+.|...++ .+|++++|-|+-+...-+.+.. |.+ ++.|||.-+|. |--....
T Consensus 111 w~~gy~sg~l-k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~--K~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGEL-KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGL--KVESQSY 186 (254)
T ss_pred HHhhcccccc-cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccc--eehhHHH
Confidence 3344444433 3489999999999 7999999988777655444433 222 23467766653 2345678
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
..+.+.+|.++.+.+|.=|-..-..+|+. +|+.+..+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~----aGl~a~l~ 223 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARK----AGLQAGLV 223 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHh----cccceeee
Confidence 88999999999999999999999999997 67666554
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.52 Score=46.40 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=29.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
..+...++| +.+|+|.-|+-.++..++.++|. |.|+|.+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 344444677 99999999999999999975665 5666653
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.27 Score=48.32 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=57.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
.++.|++.++++ ++|+++.++|......+..+-++ .|+ ++.- +.-|.+.+....+ ....+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~----~g~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQK----KGRVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHH----CCCEEEEEC
Confidence 478899999998 79999999999999999999996 886 2211 1134445554422 236799999
Q ss_pred CChhHHHHhhc
Q 024003 220 DRLATLKNVIK 230 (274)
Q Consensus 220 Ds~~Di~aA~~ 230 (274)
|..||..+-+.
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988876
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.3 Score=52.56 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
-+|-|||.|+++ ++|+++.++|+-..+.|..+-.+ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 478899999999 89999999999888888888765 6663
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.39 Score=50.09 Aligned_cols=94 Identities=15% Similarity=0.216 Sum_probs=68.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
++-|++...+. +.|++++++|+-....++.+-++ .| ++.|++.-. .-|.+.+.++.++ ...+.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~----~~~VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKN----GGPVAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhc----CCcEEEEeC
Confidence 56677777666 89999999999999999999997 88 567776432 2567777777653 356899999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
..||--+=.. | .+|+.=|-++.-..+.
T Consensus 794 GINDaPALA~----A---dVGIaig~gs~vAiea 820 (951)
T KOG0207|consen 794 GINDAPALAQ----A---DVGIAIGAGSDVAIEA 820 (951)
T ss_pred CCCccHHHHh----h---ccceeeccccHHHHhh
Confidence 9999765433 2 3777777775443443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.16 Score=45.73 Aligned_cols=48 Identities=25% Similarity=0.126 Sum_probs=40.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 192 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~ 192 (274)
...+|++.++|+ ++|++++|||+++...+..++++ +|+..++-...|+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nGa 70 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENGA 70 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcCc
Confidence 356788888888 79999999999999999999996 9998776655554
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.33 Score=41.11 Aligned_cols=87 Identities=20% Similarity=0.219 Sum_probs=58.5
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC-CCCCce--EecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 148 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 148 pGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl-~~~f~~--v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
.+|...|. ++.-+++-+|+....+++..=.- |-. ...++. ++|.. .|. .+.+...++ +|+.|+.
T Consensus 75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h--~KV----~~vrth~id----lf~ed~~ 143 (194)
T COG5663 75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLH--HKV----EAVRTHNID----LFFEDSH 143 (194)
T ss_pred HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhccc--ccc----hhhHhhccC----ccccccC
Confidence 56777777 67778999999988887765442 322 223443 33433 222 255667777 9999986
Q ss_pred h-HHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 223 A-TLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 223 ~-Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
- -++.|++ +|+|++...--|+..
T Consensus 144 ~na~~iAk~----~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIAKN----AGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHHHh----cCCcEEEecCccccc
Confidence 4 4566665 999999999888754
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.05 Score=46.48 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=19.1
Q ss_pred eEEEecCcccccCH-HHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSC-EETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~-~di~~a~n~a~~~~ 31 (274)
+|+||+||||+++- ..+...+..+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l 29 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERL 29 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHH
Confidence 48999999999874 33444455555555
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.53 Score=42.89 Aligned_cols=50 Identities=36% Similarity=0.543 Sum_probs=36.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHH---HHHHHhCCCCCCceEecC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGL 192 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~---iL~~~~gl~~~f~~v~g~ 192 (274)
..++|||+.|.|+ ++|+++.++||.+.+..+. -|+.+.+++-..+.|+.+
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 4689999999999 8999999999987665442 233225565666777764
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.052 Score=44.67 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.5
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
|+++|||||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 5899999999999876
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.46 Score=51.73 Aligned_cols=33 Identities=18% Similarity=0.438 Sum_probs=27.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLL 176 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL 176 (274)
.+|=||+.++++ ++|+++.++|+-..+.+..+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA 760 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIG 760 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 478899999999 799999999997766665553
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.95 Score=40.36 Aligned_cols=38 Identities=13% Similarity=0.390 Sum_probs=33.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV 182 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl 182 (274)
.++-||+.|+++ ++-++=.|+|+.-+.+++++.. +.|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCC
Confidence 578999999999 6777889999999999999988 4777
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.078 Score=48.80 Aligned_cols=29 Identities=10% Similarity=0.102 Sum_probs=21.6
Q ss_pred ceEEEecCcccccCHHHH---HHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEET---ALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di---~~a~n~a~~~~ 31 (274)
++|+|||||||++.-..+ -..+-.+++++
T Consensus 127 kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 127 HVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred eEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 789999999999986543 25566666666
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.099 Score=48.54 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=22.0
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
+++||+||||+++-.- ..++..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999875 66666677776
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.072 Score=45.34 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.6
Q ss_pred CceEEEecCcccccC
Q 024003 2 EDLYALDFDGVICDS 16 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS 16 (274)
.|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 479999999999996
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.063 Score=41.33 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.7
Q ss_pred eEEEecCcccccCHHH
Q 024003 4 LYALDFDGVICDSCEE 19 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~d 19 (274)
+++||+||||+++-+.
T Consensus 1 ~~vfD~D~tl~~~~~~ 16 (139)
T cd01427 1 AVLFDLDGTLLDSEPG 16 (139)
T ss_pred CeEEccCCceEccCcc
Confidence 4899999999998763
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.27 Score=47.48 Aligned_cols=52 Identities=17% Similarity=0.008 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhC---CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
.|-..+.++++++ |+++++++.+||+.||+++=+. +|+..|+| | +..+++++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~----ag~~gvam--~-NA~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV----PDVYGVMV--S-NAQEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc----CCCCEEEE--c-CCcHHHHH
Confidence 7889999999999 9999999999999999999886 67666777 4 33345554
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.72 E-value=1.1 Score=47.77 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEe-cCC-CC------------------CcH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-GLG-TG------------------PKV 198 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~-g~~-~~------------------pkp 198 (274)
.+|=|++.++++ ++|+++.++|+-....|..+-++ .|+..--. .++ |.+ .. =.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 478899999999 89999999999999999999997 99864332 244 543 10 122
Q ss_pred H---HHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 199 N---VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 199 ~---~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+ -+-+++++. ..-+.|+||..||.-|=|+ |. |||.-|
T Consensus 625 ~qK~~IV~~lq~~---g~vVamtGDGvNDapALk~----AD---VGIamg 664 (917)
T COG0474 625 EQKARIVEALQKS---GHVVAMTGDGVNDAPALKA----AD---VGIAMG 664 (917)
T ss_pred HHHHHHHHHHHhC---CCEEEEeCCCchhHHHHHh----cC---ccEEec
Confidence 2 222334433 4668999999999999987 55 555555
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.13 Score=47.47 Aligned_cols=29 Identities=10% Similarity=0.086 Sum_probs=21.1
Q ss_pred ceEEEecCcccccCHHHH---HHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEET---ALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di---~~a~n~a~~~~ 31 (274)
++|+||+||||+++-..+ -..+-.+++++
T Consensus 129 ~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL 160 (303)
T PHA03398 129 HVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL 160 (303)
T ss_pred cEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence 799999999999995544 34455555555
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.16 Score=44.97 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=40.8
Q ss_pred hCCCcEEEEcCCchH----HHHHHHHHHhCCC----CCCceEecCCC-C-CcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 156 LASSRIYIVTSNQSR----FVETLLRELAGVT----ITPDRLYGLGT-G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 156 ~~g~~laIvTnK~~~----~~~~iL~~~~gl~----~~f~~v~g~~~-~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
.+-+...|..-..+. +.. .|.. .|+. ..|-.|.+... | .....+++.-++++... -++-+||+.||+
T Consensus 146 ~rEyseti~~rs~d~~~~~~~~-~L~e-~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r-~t~~~GDg~nD~ 222 (274)
T COG3769 146 LREYSETIIWRSSDERMAQFTA-RLNE-RGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGAR-TTLGLGDGPNDA 222 (274)
T ss_pred HHHhhhheeecccchHHHHHHH-HHHh-cCceEEeccceEEEeccccCccHHHHHHHHHHHhcCcee-EEEecCCCCCcc
Confidence 344555555544433 333 3442 5664 34566666543 3 44556666666666543 589999999997
Q ss_pred HHhh
Q 024003 226 KNVI 229 (274)
Q Consensus 226 ~aA~ 229 (274)
=.--
T Consensus 223 Pl~e 226 (274)
T COG3769 223 PLLE 226 (274)
T ss_pred cHHH
Confidence 6543
|
|
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=90.88 E-value=3.5 Score=37.01 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEecCCCC-CcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~g~~~~-pkp~~l~~~l~~l~~~~~ 213 (274)
.-.|+|.+.++++ +.|+.+.-+++..-..++++.+ +|-+-..- .-+|+..+ .+|+.+..+.+..+++
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp-- 177 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP-- 177 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc--
Confidence 4578999999999 5799888566666677888877 57654333 45564444 5799999888765544
Q ss_pred cEEEEc---CChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 214 RLHFVE---DRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 214 ~~l~VG---Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
|++| .++.|+..|.+ .|...+.|.++...
T Consensus 178 --VI~egGI~tpeda~~Ame----lGAdgVlV~SAIt~ 209 (248)
T cd04728 178 --VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAK 209 (248)
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhcC
Confidence 6766 35788888887 89999999999865
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.49 Score=42.76 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=46.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.|-..+.++++.+|+..++++++||..+|+.+=+.... -+-.+|.| |-.. -.+ ++.+.+++++...|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~-~~g~~vav--g~a~------~~A--~~~l~~~~~v~~~L 240 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNR-LGGISVKV--GTGA------TQA--SWRLAGVPDVWSWL 240 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHh-cCCeEEEE--CCCC------CcC--eEeCCCHHHHHHHH
Confidence 78889999999999999999999999999887664100 12334555 4221 112 37788888776554
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.12 Score=42.74 Aligned_cols=14 Identities=50% Similarity=0.805 Sum_probs=12.9
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
|+|+||.||||+|.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 78999999999984
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.53 Score=42.00 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHHhCCCCCCceEecC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 192 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTn---K~~~~~~~iL~~~~gl~~~f~~v~g~ 192 (274)
..++||+.+.|+ ++|+++.++|| ++.......|++ +|++...+.|+..
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 467899999998 79999999998 667778888886 9998777777764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.98 E-value=0.18 Score=45.57 Aligned_cols=46 Identities=9% Similarity=-0.042 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 170 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 170 ~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
..++.++++ +|+..-.-..+| |...+-+++..+-+ ++ .-.+-||.+
T Consensus 177 ~al~~ll~~-~~~~~~~v~~~G-D~~nD~~mf~~~~~-~~---g~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQE-APFAGRTPVFVG-DDLTDEAGFAVVNR-LG---GISVKVGTG 222 (266)
T ss_pred HHHHHHHHh-cCCCCCeEEEEc-CCccHHHHHHHHHh-cC---CeEEEECCC
Confidence 456778885 887654333344 54567777776633 22 234777755
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.23 Score=44.13 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHH
Q 024003 170 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQL 204 (274)
Q Consensus 170 ~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~ 204 (274)
..++.++++ +++..-...++| |+..+.+++..+
T Consensus 170 ~a~~~~~~~-~~~~~~~~i~iG-D~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSGISPVYLG-DDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCCCceEEEc-CCCcHHHHHHHH
Confidence 677788885 887654444445 545677777766
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=87.47 E-value=0.32 Score=41.26 Aligned_cols=51 Identities=14% Similarity=0.138 Sum_probs=23.5
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
-|-.++....-+++.++ .|+. |-+.++=.|... - .+...++|+. |++|-|+
T Consensus 103 eI~~gsK~~Hf~~i~~~-tgI~-y~eMlFFDDe~~---N-~~~v~~lGV~---~v~v~~G 153 (169)
T PF12689_consen 103 EIYPGSKTTHFRRIHRK-TGIP-YEEMLFFDDESR---N-IEVVSKLGVT---CVLVPDG 153 (169)
T ss_dssp EESSS-HHHHHHHHHHH-H----GGGEEEEES-HH---H-HHHHHTTT-E---EEE-SSS
T ss_pred heecCchHHHHHHHHHh-cCCC-hhHEEEecCchh---c-ceeeEecCcE---EEEeCCC
Confidence 33334445556677775 8985 445555433211 1 2234458875 7888774
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=87.43 E-value=0.33 Score=39.68 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=14.6
Q ss_pred CceEEEecCcccccCHH
Q 024003 2 EDLYALDFDGVICDSCE 18 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~ 18 (274)
+..+++||||||++|..
T Consensus 2 k~~lvldld~tl~~~~~ 18 (148)
T smart00577 2 KKTLVLDLDETLVHSTH 18 (148)
T ss_pred CcEEEEeCCCCeECCCC
Confidence 36799999999999864
|
|
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=87.33 E-value=9.1 Score=34.46 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=70.4
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEecCCCC-CcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~g~~~~-pkp~~l~~~l~~l~~~~~ 213 (274)
.-.++|.+.++++ +.|+.+.-+++..-..++++.+ +|-+-..- ..+|+..+ .+|+.+..+.+..+++
T Consensus 102 ~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp-- 177 (250)
T PRK00208 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP-- 177 (250)
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe--
Confidence 4568999999999 5699888455556677777776 67664333 55665444 5799988888765554
Q ss_pred cEEEEcC---ChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 214 RLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 214 ~~l~VGD---s~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
+++|= ++.|+..|.+ .|...+.|.+|...
T Consensus 178 --VIveaGI~tpeda~~Ame----lGAdgVlV~SAItk 209 (250)
T PRK00208 178 --VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAV 209 (250)
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhhC
Confidence 77764 5678888887 89999999999865
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.86 E-value=0.63 Score=41.73 Aligned_cols=46 Identities=26% Similarity=0.381 Sum_probs=35.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHHhCCCCCCceEec
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~~gl~~~f~~v~g 191 (274)
.++||+.+.|+ ++|++++++||.+... ....|+. +|++.-.+.|+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~t 72 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFT 72 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEc
Confidence 38999999998 7999999999966654 5566665 787654555554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.43 E-value=2.2 Score=38.21 Aligned_cols=47 Identities=21% Similarity=0.295 Sum_probs=34.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--HhCCCCCCceEec
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYG 191 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~--~~gl~~~f~~v~g 191 (274)
.++||+.+.|+ ++|+++.++||.+......+.++ .+|+..-.+.|+.
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~t 68 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYT 68 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEec
Confidence 68999999998 79999999999888665555443 1577544555654
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=86.28 E-value=0.37 Score=37.02 Aligned_cols=14 Identities=36% Similarity=0.809 Sum_probs=11.9
Q ss_pred EEEecCcccccCHH
Q 024003 5 YALDFDGVICDSCE 18 (274)
Q Consensus 5 ilFDlDGTLvDS~~ 18 (274)
++||+||||.+.-.
T Consensus 1 ~l~D~dGvl~~g~~ 14 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE 14 (101)
T ss_dssp EEEESTTTSEETTE
T ss_pred CEEeCccEeEeCCC
Confidence 69999999998654
|
... |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=86.12 E-value=6.4 Score=34.65 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=47.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~---~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
...+|||+.+.|+ ++|+++.++||.+ .......|.+++|+...++.++.+ ...+...+++.. +...++
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits-----~~~~~~~l~~~~-~~~~v~ 85 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS-----GSVTKDLLRQRF-EGEKVY 85 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH-----HHHHHHHHHHhC-CCCEEE
Confidence 3578999999998 6899999999644 443333344346776556666642 223333343322 224577
Q ss_pred EEcCChhHHHHhhc
Q 024003 217 FVEDRLATLKNVIK 230 (274)
Q Consensus 217 ~VGDs~~Di~aA~~ 230 (274)
.+|.. ...+..++
T Consensus 86 v~G~~-~~~~~l~~ 98 (236)
T TIGR01460 86 VIGVG-ELRESLEG 98 (236)
T ss_pred EECCH-HHHHHHHH
Confidence 78853 33334343
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=85.89 E-value=0.37 Score=40.72 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=30.1
Q ss_pred CCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHh
Q 024003 166 SNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 166 nK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 228 (274)
.|| ...+.++++ +|+..--...+| |+..+-.+ ++..|+. +.++++..++..+
T Consensus 82 pkp-~~~~~~~~~-l~~~~~ev~~iG-D~~nDi~~----~~~ag~~----~am~nA~~~lk~~ 133 (169)
T TIGR02726 82 KKT-EPYAQMLEE-MNISDAEVCYVG-DDLVDLSM----MKRVGLA----VAVGDAVADVKEA 133 (169)
T ss_pred CCH-HHHHHHHHH-cCcCHHHEEEEC-CCHHHHHH----HHHCCCe----EECcCchHHHHHh
Confidence 454 456677775 887643233444 43334333 3445655 8888888888654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=85.36 E-value=4.8 Score=43.53 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=35.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
.++-|++.+.++ ++|+++.++|+-....+..+-++ .|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478899999999 89999999999999999999997 9984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.37 E-value=2.1 Score=42.51 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=57.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
...||+.|-.+ +.|++...||.-.+-.+..+-++ -|++.|.. + .+|+-=.++.++-+....=+.|.||.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-----e--atPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-----E--ATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-----c--CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 45699999888 79999999999999999999886 89986532 1 24443333444444455668999999
Q ss_pred hhHHHHhhc
Q 024003 222 LATLKNVIK 230 (274)
Q Consensus 222 ~~Di~aA~~ 230 (274)
.||.-+=.+
T Consensus 519 TNDAPALAq 527 (681)
T COG2216 519 TNDAPALAQ 527 (681)
T ss_pred CCcchhhhh
Confidence 999876443
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=83.95 E-value=0.58 Score=40.58 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=56.5
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCC----CceEecCC---------CCCc-HHHHHHHHhhCC--
Q 024003 148 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTIT----PDRLYGLG---------TGPK-VNVLKQLQKKPE-- 209 (274)
Q Consensus 148 pGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~----f~~v~g~~---------~~pk-p~~l~~~l~~l~-- 209 (274)
||+.++|+ .+.+.++|-|+.....++.+++. +|+... ...+.... .++. -..+..+-.+++
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~ 126 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEF 126 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccC
Confidence 67777777 67889999999999999999996 776321 11122111 1111 111333333454
Q ss_pred CCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 210 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 210 ~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
.+.+++|+|.|++.-...--. .|+++- +|-
T Consensus 127 ~~~~ntiiVDd~p~~~~~~P~----N~i~I~--~f~ 156 (195)
T TIGR02245 127 YSMKNTIMFDDLRRNFLMNPQ----NGLKIR--PFK 156 (195)
T ss_pred CCcccEEEEeCCHHHHhcCCC----CccccC--Ccc
Confidence 367899999999877654322 466654 554
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=83.68 E-value=2.4 Score=36.51 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=30.7
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
.|-..+.|+ ++|++++|+||++...++.+++. +++.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 333667777 79999999999999999999996 8886
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.52 E-value=13 Score=40.38 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=28.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE 178 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~ 178 (274)
-+|=.||.|+++ ++|||+-|.|+-..+.|..+--.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s 687 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS 687 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh
Confidence 478899999998 89999999999877777666543
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=83.45 E-value=6.8 Score=35.35 Aligned_cols=80 Identities=11% Similarity=0.155 Sum_probs=59.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCC--ceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 236 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f--~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 236 (274)
+.+.|-|+.--+.+-+.|= +||+.+| +-|+....--|...++.+.+++|-+....+.|||+.---.+|+. -+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~----l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQA----MN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHh----cC
Confidence 4455555555555556653 7888766 45665433389999999999999888899999999988899997 78
Q ss_pred CcEEEEeC
Q 024003 237 WNLYLVDW 244 (274)
Q Consensus 237 v~~i~v~w 244 (274)
+|++=++-
T Consensus 251 wPFw~I~~ 258 (274)
T TIGR01658 251 WPFVKIDL 258 (274)
T ss_pred CCeEEeec
Confidence 88887754
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=83.16 E-value=1.1 Score=47.35 Aligned_cols=70 Identities=11% Similarity=0.017 Sum_probs=44.8
Q ss_pred CcHHHHHHHHh---hCCCCCCcEEEEcCChhHHHHhhccCcc-CC--C----cEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 196 PKVNVLKQLQK---KPEHQGLRLHFVEDRLATLKNVIKEPEL-DG--W----NLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 196 pkp~~l~~~l~---~l~~~~~~~l~VGDs~~Di~aA~~~~~~-Ag--v----~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.|-..+..+++ .+|..++.+++|||..+|..+=+..+.. .| + ..++|+=|-+. ..|. +.+.+
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~------S~A~--y~L~d 833 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP------SKAK--YYLDD 833 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC------ccCe--EecCC
Confidence 67778888764 4688999999999999998886653210 11 1 12344435321 2223 77888
Q ss_pred hhHHHhhc
Q 024003 266 LSDFCTKL 273 (274)
Q Consensus 266 ~~~~~~~~ 273 (274)
++++...|
T Consensus 834 ~~eV~~lL 841 (854)
T PLN02205 834 TAEIVRLM 841 (854)
T ss_pred HHHHHHHH
Confidence 88876655
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.13 E-value=1.5 Score=41.45 Aligned_cols=70 Identities=19% Similarity=0.227 Sum_probs=49.3
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhC--CCCCCceEecCCCC-------CcH---------------------------H
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG-------PKV---------------------------N 199 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~~~-------pkp---------------------------~ 199 (274)
++|.+|.++||.|-.|+..-+....| +...||+|+-.-.| .+| -
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G 333 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQG 333 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeec
Confidence 78999999999999999988873223 34689998864321 111 1
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
-+...++-.|....+++|+||..+-=
T Consensus 334 ~l~~flelt~WrG~~VlYFGDHlySD 359 (510)
T KOG2470|consen 334 NLKSFLELTGWRGPRVLYFGDHLYSD 359 (510)
T ss_pred cHHHHHHHhccCCCeeEEecCcchhh
Confidence 24455555577778999999998643
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=82.52 E-value=0.76 Score=38.33 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=14.3
Q ss_pred CceEEEecCcccccCHH
Q 024003 2 EDLYALDFDGVICDSCE 18 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~ 18 (274)
++.+++|||+|||.|-.
T Consensus 1 k~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTF 17 (162)
T ss_pred CcEEEEcCCCCcCCCCC
Confidence 36899999999999943
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.29 E-value=0.63 Score=42.32 Aligned_cols=99 Identities=15% Similarity=0.069 Sum_probs=55.0
Q ss_pred CCCCccHHHHHHhCCCcEEEEcCC--chHHHHHHHHH-HhCCCCC-CceEecCC------CC-CcHHHHHHHHhhCCCCC
Q 024003 144 NRLYPGVSDALKLASSRIYIVTSN--QSRFVETLLRE-LAGVTIT-PDRLYGLG------TG-PKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 144 ~~lypGv~e~L~~~g~~laIvTnK--~~~~~~~iL~~-~~gl~~~-f~~v~g~~------~~-pkp~~l~~~l~~l~~~~ 212 (274)
..-+||+. ++.+|+-+++-+-+ ++......+.. ...+... .....|.. .+ .|-..+.+++++++...
T Consensus 121 v~r~pGs~--iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~ 198 (266)
T COG1877 121 VERTPGSY--IERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDG 198 (266)
T ss_pred hhcCCCeE--EEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCC
Confidence 34567742 33678878887732 22222222221 1233333 23333543 12 67888999999888776
Q ss_pred CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 213 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 213 ~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
.-+++.||-..|=.+=... .+...+.|.=|.+
T Consensus 199 ~~~~~aGDD~TDE~~F~~v---~~~~~~~v~v~~~ 230 (266)
T COG1877 199 RFPIFAGDDLTDEDAFAAV---NKLDSITVKVGVG 230 (266)
T ss_pred CcceecCCCCccHHHHHhh---ccCCCceEEecCC
Confidence 6789999999886544331 2333444444544
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=82.26 E-value=0.71 Score=38.72 Aligned_cols=13 Identities=38% Similarity=0.296 Sum_probs=11.8
Q ss_pred ceEEEecCccccc
Q 024003 3 DLYALDFDGVICD 15 (274)
Q Consensus 3 ~~ilFDlDGTLvD 15 (274)
|+++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999985
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=82.17 E-value=5.7 Score=39.17 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=59.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC--------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHH
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 227 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~--------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 227 (274)
++|+-++|||-....-++.+..+ + .+.|.-.+. .||.+-++++++++++.-+..+||.|++.-.+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 69999999999899999888885 3 355655331 299999999999999999999999999999999
Q ss_pred hhc
Q 024003 228 VIK 230 (274)
Q Consensus 228 A~~ 230 (274)
-++
T Consensus 343 vk~ 345 (574)
T COG3882 343 VKR 345 (574)
T ss_pred HHh
Confidence 987
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=81.72 E-value=5 Score=34.79 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=12.8
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
++++.||||||+|+
T Consensus 22 klLVLDLDeTLvh~ 35 (195)
T TIGR02245 22 KLLVLDIDYTLFDH 35 (195)
T ss_pred cEEEEeCCCceEcc
Confidence 69999999999975
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.68 E-value=5.3 Score=41.81 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=68.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc----eEe-cCC--C-----------------CCc
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLY-GLG--T-----------------GPK 197 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~----~v~-g~~--~-----------------~pk 197 (274)
+|=|+|.+.++ ++|+++.++|+-..+.++.|.++ .|+-..-+ .++ |.+ . .-.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 56688888888 89999999999999999999997 99865444 233 322 0 012
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 198 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 198 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
|..=.++.+.|.-..+=+.|-||..||--+=|. |. ||+.-|-..-+--++
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~----Ad---IGIAMG~~GTdVaKe 712 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKK----AD---IGIAMGISGTDVAKE 712 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhh----cc---cceeecCCccHhhHh
Confidence 222233333333344557999999999998887 33 788888543333333
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=81.41 E-value=1.2 Score=45.91 Aligned_cols=64 Identities=13% Similarity=-0.039 Sum_probs=43.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.|-..+..+++ +.+++.++++||+.+|..+-+. ++-..++|+=|-. ...+. +.+.+++++.+.|
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~----~~~~~~~v~vG~~------~s~A~--~~l~~~~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRA----LPETAITVKVGPG------ESRAR--YRLPSQREVRELL 720 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHh----cccCceEEEECCC------CCcce--EeCCCHHHHHHHH
Confidence 78888998888 7788999999999999999886 3212233333521 12233 7777777765544
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=81.12 E-value=3.2 Score=36.39 Aligned_cols=40 Identities=23% Similarity=0.053 Sum_probs=34.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
...|+..+.|+ ++|+++.++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 46678889888 78999999999999999999997 898653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.82 E-value=3.3 Score=39.77 Aligned_cols=84 Identities=14% Similarity=0.179 Sum_probs=62.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhC--CCCCCceEecCCCC----------------------------------CcHH
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG----------------------------------PKVN 199 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~~~----------------------------------pkp~ 199 (274)
+.|.++.++||..-.++...+.+++| +..||+.|+-...| +.+-
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySgg 291 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGG 291 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcc
Confidence 89999999999999999999997666 55788877743111 2224
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEE
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v 242 (274)
....+++.+++...+++||||.. .||..-+. .-|..++.|
T Consensus 292 s~~~~~~~l~~~g~diLy~gdHi~~dvl~skk---~~~wrt~lv 332 (424)
T KOG2469|consen 292 SLKTVETSMKVKGKDILYGGDHIWGDVLVSKK---RRGWRTVLV 332 (424)
T ss_pred hHHHHHHHhcccccceeecccceeeeEEecce---ecceEEEEE
Confidence 56667777888889999999986 46666554 356666666
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=80.49 E-value=0.99 Score=42.90 Aligned_cols=70 Identities=13% Similarity=-0.031 Sum_probs=42.6
Q ss_pred CcHHHHHHHHhhCCCCC---CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 196 PKVNVLKQLQKKPEHQG---LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~---~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
.|-..+..+++.++... .-.+||||-.+|-.+=+.......-..|.| |-..++ ..+. +.+.+++++...
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V--G~~~k~----T~A~--y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV--SKFPKD----TDAS--YSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE--CCCCCC----Ccce--EeCCCHHHHHHH
Confidence 56688999999988653 358999999999666443110011123444 432221 2233 788888888665
Q ss_pred c
Q 024003 273 L 273 (274)
Q Consensus 273 ~ 273 (274)
|
T Consensus 355 L 355 (366)
T PLN03017 355 L 355 (366)
T ss_pred H
Confidence 5
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=80.17 E-value=4.5 Score=36.64 Aligned_cols=76 Identities=26% Similarity=0.261 Sum_probs=51.7
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHH--hCCCCCCce--EecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 156 LASSRIYIVTSNQSRFVETLLREL--AGVTITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~--~gl~~~f~~--v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
..-++++|||......-+++++.+ .|+. .|- ..|+- +|..+|... + |. ||+.|...-++.|.
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~--~K~~vL~~~----~--ph--IFFDDQ~~H~~~a~-- 249 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGL--PKGPVLKAF----R--PH--IFFDDQDGHLESAS-- 249 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCC--chhHHHHhh----C--CC--EeecCchhhhhHhh--
Confidence 356899999987666555555432 4553 332 22432 566555432 3 44 99999999999998
Q ss_pred CccCCCcEEEEeCCCCC
Q 024003 232 PELDGWNLYLVDWGYNT 248 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~ 248 (274)
.++|++-|.||-.+
T Consensus 250 ---~~vps~hVP~gv~n 263 (264)
T PF06189_consen 250 ---KVVPSGHVPYGVAN 263 (264)
T ss_pred ---cCCCEEeccCCcCC
Confidence 48999999999653
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 274 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 9e-05
Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 73/278 (26%)
Query: 37 DGVDSALEDWIVDQM-HTCFILLQLRPV-VETGYDTLLLVRLLLEMRLPSLRKSSVAEGL 94
V +A + +C ILL R V + L+ +L E
Sbjct: 251 LNVQNA---KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD---EVK 304
Query: 95 TVEGILENWLKIKPVIMEEWSENREA------LIELSGKVRDEWMDTDFTTW--IGANRL 146
+L +L +P RE + + + + + T + W + ++L
Sbjct: 305 ---SLLLKYLDCRPQ-----DLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKL 355
Query: 147 YPGVSDALKLASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLYGLGTGPKVN----VL 201
+ +L + Y + F ++ I L + + V+
Sbjct: 356 TTIIESSLNVLEPAEY-----RKMFDRLSVFPP--SAHIPTILLSLIWFDVIKSDVMVVV 408
Query: 202 KQLQKK------PEHQGLRLHFV-------EDRLATLKNVIKE---------------PE 233
+L K P+ + + + + L I + P
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 234 LDG-WNLYLVDWGYN-TPKERAEAASMPRIQLLQLSDF 269
LD + ++ G++ E E ++ R+ L DF
Sbjct: 469 LDQYFYSHI---GHHLKNIEHPERMTLFRMVFL---DF 500
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 274 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 100.0 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 100.0 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.97 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.97 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.97 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.97 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.96 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.96 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.96 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.95 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.95 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.95 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.95 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.95 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.95 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.94 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.94 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.94 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.94 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.94 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.94 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.94 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.94 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.94 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.94 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.93 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.93 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.93 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.93 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.93 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.93 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.93 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.92 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.92 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.92 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.91 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.91 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.89 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.89 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.88 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.88 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.88 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.88 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.88 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.87 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.87 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.87 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.87 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.86 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.86 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.86 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.85 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.85 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.85 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.84 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.83 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.83 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.83 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.82 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.82 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.7 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.78 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.76 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.76 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.76 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.75 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.74 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.73 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.73 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.73 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.72 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.72 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.72 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.71 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.7 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.7 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.69 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.69 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.68 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.66 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.64 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.64 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.64 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.64 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.63 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.61 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.6 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.57 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.57 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.54 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.53 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.49 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.46 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.43 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.43 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.42 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.39 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.36 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.33 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.31 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.3 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.17 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.17 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.15 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.12 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.1 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.08 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.93 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.88 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.84 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.77 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.73 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.73 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.63 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.62 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.4 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.04 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.93 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.71 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 97.66 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.59 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.56 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.35 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.34 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.33 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.3 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.63 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.35 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.3 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.16 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.09 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.05 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.8 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.19 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.1 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 94.64 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 94.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.43 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 93.22 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 92.9 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 91.18 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 89.75 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 89.59 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 87.63 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 87.02 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 86.76 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 85.21 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 84.7 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 83.77 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 81.12 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-35 Score=248.62 Aligned_cols=203 Identities=16% Similarity=0.225 Sum_probs=157.0
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+|||||||+||.+.+..+.+.+++++ |++... ... ++.++|.+....+. ..+
T Consensus 4 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~~-~~~---- 59 (210)
T 2ah5_A 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKEL------GVPSPD-------AKT------IRGFMGPPLESSFA-TCL---- 59 (210)
T ss_dssp CCEEEECSBTTTEECHHHHHHHHHHHHHHH------TCCCCC-------HHH------HHHTSSSCHHHHHH-TTS----
T ss_pred CCEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCCC-------HHH------HHHHcCccHHHHHH-HHc----
Confidence 389999999999999999999999999999 333211 123 55577766543220 000
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASS 159 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~ 159 (274)
+.+..++....+++.|.+. .....++|||+.++|+ ++|+
T Consensus 60 -----------------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~~ 100 (210)
T 2ah5_A 60 -----------------------------------SKDQISEAVQIYRSYYKAK----GIYEAQLFPQIIDLLEELSSSY 100 (210)
T ss_dssp -----------------------------------CGGGHHHHHHHHHHHHHHT----GGGSCEECTTHHHHHHHHHTTS
T ss_pred -----------------------------------CHHHHHHHHHHHHHHHHHh----ccCCCCCCCCHHHHHHHHHcCC
Confidence 0001112233344444332 2234689999999999 3399
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC--CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 237 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~--~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv 237 (274)
+++|+||+++..++..|++ +|+..+|+.+++++ .||||++++++++++|++|++|+|||||.+|+++|++ ||+
T Consensus 101 ~l~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~----aG~ 175 (210)
T 2ah5_A 101 PLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE----TGI 175 (210)
T ss_dssp CEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTC
T ss_pred eEEEEeCCCHHHHHHHHHh-cCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHH----CCC
Confidence 9999999999999999996 99999999999865 3699999999999999999999999999999999998 999
Q ss_pred cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 238 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 238 ~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
++|+|.||++..+++.... |++++.++.+|.+.|+
T Consensus 176 ~~i~v~~~~~~~~~l~~~~--a~~v~~~~~el~~~l~ 210 (210)
T 2ah5_A 176 QKLAITWGFGEQADLLNYQ--PDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp EEEEESSSSSCHHHHHTTC--CSEEESSTTHHHHHTC
T ss_pred cEEEEcCCCCCHHHHHhCC--CCEEECCHHHHHHHhC
Confidence 9999999998877776543 6699999999987664
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=244.18 Aligned_cols=203 Identities=18% Similarity=0.119 Sum_probs=151.3
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
|+|+|||||||+||.+.+..+.+.+++++ |++.. .+. .+.+.|......+ +...+...
T Consensus 2 kAViFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~~~ 59 (216)
T 3kbb_A 2 EAVIFDMDGVLMDTEPLYFEAYRRVAESY------GKPYT--------EDL------HRRIMGVPEREGL--PILMEALE 59 (216)
T ss_dssp CEEEEESBTTTBCCGGGHHHHHHHHHHHT------TCCCC--------HHH------HHHHTTSCHHHHH--HHHHHHTT
T ss_pred eEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHhccchhhhh--hhhhhccc
Confidence 89999999999999999999999999998 44432 122 4456665544332 11111000
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
. .. ..+ +....+.+.+...+ ....+++||+.++|+ ++|+
T Consensus 60 ~---------~~----------------------~~~---~~~~~~~~~~~~~~----~~~~~~~pg~~~~l~~L~~~g~ 101 (216)
T 3kbb_A 60 I---------KD----------------------SLE---NFKKRVHEEKKRVF----SELLKENPGVREALEFVKSKRI 101 (216)
T ss_dssp C---------CS----------------------CHH---HHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHHHHTTC
T ss_pred c---------hh----------------------hHH---HHHHHHHHHHHHHH----HHhcccCccHHHHHHHHHHcCC
Confidence 0 00 011 11122222222222 223679999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||++...+...++. +|+..+|+.+++++ .||+|+++..+++++|++|++|+|||||.+|+++|++ |
T Consensus 102 ~~~i~tn~~~~~~~~~l~~-~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~----a 176 (216)
T 3kbb_A 102 KLALATSTPQREALERLRR-LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKS----A 176 (216)
T ss_dssp EEEEECSSCHHHHHHHHHH-TTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----T
T ss_pred CcccccCCcHHHHHHHHHh-cCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHH----c
Confidence 9999999999999999996 99999999999865 4699999999999999999999999999999999998 9
Q ss_pred CCcEE-EEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 236 GWNLY-LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 236 gv~~i-~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||++| +|+||+++.+++.++++. .+.++.++.+.|
T Consensus 177 G~~~i~~v~~g~~~~~~l~~~~~~---~i~~~~eli~~l 212 (216)
T 3kbb_A 177 GIERIYGVVHSLNDGKALLEAGAV---ALVKPEEILNVL 212 (216)
T ss_dssp TCCCEEEECCSSSCCHHHHHTTCS---EEECGGGHHHHH
T ss_pred CCcEEEEecCCCCCHHHHHhCCCc---EECCHHHHHHHH
Confidence 99998 699999999999887643 344666665443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=245.09 Aligned_cols=225 Identities=13% Similarity=0.150 Sum_probs=164.9
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCC-chhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVD-SALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~-~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|.|+|+|||||||+||.+.+..+.+.+++.+ |++ ..+ ... ++.++|.+....+ .+.+..
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~ 62 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQT------GHRHDFT-------VED------IKNFFGSGVVVAV-TRALAY 62 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TSCCCCC-------HHH------HHHHCSSCHHHHH-HHHHHH
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHc------CCCCCCC-------HHH------HHHhcCccHHHHH-HHHHHh
Confidence 3699999999999999999999999999998 443 211 134 5668888766544 233210
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhh--hccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEE--WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK-- 155 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~-- 155 (274)
.. ....... ..+. ..... .+.+.+...+....+++.|.+ ......++|||+.++|+
T Consensus 63 ~~-----------~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l 122 (240)
T 2hi0_A 63 EA-----------GSSRESL-VAFG----TKDEQIPEAVTQTEVNRVLEVFKPYYAD----HCQIKTGPFPGILDLMKNL 122 (240)
T ss_dssp HT-----------TCCHHHH-TTTT----STTCCCCTTCCHHHHHHHHHHHHHHHHH----TSSSSCEECTTHHHHHHHH
T ss_pred cc-----------ccccccc-cccc----ccccccCCCCCHHHHHHHHHHHHHHHHH----hhhhcCCcCCCHHHHHHHH
Confidence 00 0000000 0000 00000 112344444444445555443 33345689999999998
Q ss_pred -hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 156 -LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 156 -~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++|++++|+||++...++.+|++ +|+. +|+.+++++ .||||+++.++++++|++|++|+|||||.+|+++|++
T Consensus 123 ~~~g~~~~i~t~~~~~~~~~~l~~-~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~ 200 (240)
T 2hi0_A 123 RQKGVKLAVVSNKPNEAVQVLVEE-LFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARN 200 (240)
T ss_dssp HHTTCEEEEEEEEEHHHHHHHHHH-HSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHH-cCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH
Confidence 68999999999999999999996 9999 999999864 3599999999999999999999999999999999998
Q ss_pred cCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 231 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||++..+++.... |++++.++.++.+.|
T Consensus 201 ----aG~~~v~v~~~~~~~~~~~~~~--a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 201 ----SEMDEIAVNWGFRSVPFLQKHG--ATVIVDTAEKLEEAI 237 (240)
T ss_dssp ----TTCEEEEESSSSSCHHHHHHTT--CCCEECSHHHHHHHH
T ss_pred ----CCCeEEEECCCCCchhHHHhcC--CCEEECCHHHHHHHh
Confidence 9999999999998877776544 569999999987654
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=244.79 Aligned_cols=211 Identities=15% Similarity=0.111 Sum_probs=151.4
Q ss_pred CC-ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~-~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|+ |+|+|||||||+||.+.+..|.+.+++++ |++.. .+. .+.+.|.+....+ .+.+..
T Consensus 3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~ 61 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEI------GISID--------AQF------NESLKGISRDESL-RRILQH 61 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------TTG------GGGGTTCCHHHHH-HHHHHH
T ss_pred ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHcCCCHHHHH-HHHHHH
Confidence 66 99999999999999999999999999999 44321 123 4557777766544 233321
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
. +...+ ....+..+........|.....+ .....++||+.++|+ +
T Consensus 62 ~------------~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~ll~~L~~ 109 (243)
T 4g9b_A 62 G------------GKEGD------------------FNSQERAQLAYRKNLLYVHSLRE--LTVNAVLPGIRSLLADLRA 109 (243)
T ss_dssp T------------TCGGG------------------CCHHHHHHHHHHHHHHHHHHHHT--CCGGGBCTTHHHHHHHHHH
T ss_pred h------------hcccc------------------hhHHHHHHHHHHHHHHHHHHHHh--cccccccccHHHHHHhhhc
Confidence 0 00000 01111111111111222222111 223579999999999 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
+|++++|+||+.. +..+|++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+|||||.+||++|++
T Consensus 110 ~g~~i~i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~-- 184 (243)
T 4g9b_A 110 QQISVGLASVSLN--APTILAA-LELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINA-- 184 (243)
T ss_dssp TTCEEEECCCCTT--HHHHHHH-TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH--
T ss_pred ccccceecccccc--hhhhhhh-hhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH--
Confidence 9999999999875 4678996 99999999999865 3699999999999999999999999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||++|+|+||+...+.+.... .++.+.++.+|.+.|
T Consensus 185 --aG~~~I~V~~g~~~ad~~~~~~--~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 185 --SGMRSVGIGAGLTGAQLLLPST--ESLTWPRLSAFWQNV 221 (243)
T ss_dssp --HTCEEEEESTTCCSCSEEESSG--GGCCHHHHHHHHHHH
T ss_pred --cCCEEEEECCCCCcHHHhcCCh--hhcCHHHHHHHHHHH
Confidence 9999999999998766554433 347777777776544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=228.21 Aligned_cols=205 Identities=16% Similarity=0.212 Sum_probs=162.6
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||-+.+..+.+.+++++ |.+.. .... ++.++|.+....+. ..+
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~~-~~~--- 59 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKF------DIQVE-------DLSS------LNKFVGPPLKTSFM-EYY--- 59 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTT------TCCCS-------CGGG------GGGGSSSCHHHHHH-HHH---
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHH------HHHHhCcCHHHHHH-HHh---
Confidence 4699999999999999999999999999988 33321 1234 56677777654331 111
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
+++.+...+....+++.|.+ .......+|||+.++|+ ++
T Consensus 60 ----------------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~ 101 (226)
T 3mc1_A 60 ----------------------------------NFDEETATVAIDYYRDYFKA----KGMFENKVYDGIEALLSSLKDY 101 (226)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHHHHHTT----TGGGSCCBCTTHHHHHHHHHHH
T ss_pred ----------------------------------CCCHHHHHHHHHHHHHHHHH----hCcccCccCcCHHHHHHHHHHC
Confidence 12233333334444444433 33445789999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...++.+++. +|+..+|+.+++++ .||||+++..+++++|++|++++||||+.+|+.+|++
T Consensus 102 g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~--- 177 (226)
T 3mc1_A 102 GFHLVVATSKPTVFSKQILEH-FKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALK--- 177 (226)
T ss_dssp TCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHT---
T ss_pred CCeEEEEeCCCHHHHHHHHHH-hCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999865 2599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||++..+++.... |++++.|+.+|.+.|
T Consensus 178 -aG~~~i~v~~g~~~~~~~~~~~--ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 178 -NNLPSIGVTYGFGSYEELKNAG--ANYIVNSVDELHKKI 214 (226)
T ss_dssp -TTCCEEEESSSSSCHHHHHHHT--CSEEESSHHHHHHHH
T ss_pred -CCCCEEEEccCCCCHHHHHHcC--CCEEECCHHHHHHHH
Confidence 9999999999999988875554 569999999997754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=230.10 Aligned_cols=215 Identities=19% Similarity=0.197 Sum_probs=162.0
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||.+.+..+.+.+++.+ |++... ... ++.++|.|...++ .+.+...
T Consensus 22 ~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~~ 81 (243)
T 2hsz_A 22 QFKLIGFDLDGTLVNSLPDLALSINSALKDV------NLPQAS-------ENL------VMTWIGNGADVLS-QRAVDWA 81 (243)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHH------HHHHCSSCHHHHH-HHHHHHH
T ss_pred cCCEEEEcCCCcCCCCHHHHHHHHHHHHHHc------CCCCCC-------HHH------HHHHhCchHHHHH-HHHhhhh
Confidence 4589999999999999999999999999998 443221 123 5568888876543 2332110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. ... ..+.+.+...+....+.+.|.+ ......++|||+.++|+ ++
T Consensus 82 ---------------~------------~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~ 129 (243)
T 2hsz_A 82 ---------------C------------KQA-EKELTEDEFKYFKRQFGFYYGE----NLCNISRLYPNVKETLEALKAQ 129 (243)
T ss_dssp ---------------H------------HHH-TCCCCHHHHHHHHHHHHHHHHH----HTTSSCEECTTHHHHHHHHHHT
T ss_pred ---------------h------------ccc-cccCCHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHC
Confidence 0 000 0011223333333334444433 33345689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||.+...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++
T Consensus 130 g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~--- 205 (243)
T 2hsz_A 130 GYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS--- 205 (243)
T ss_dssp TCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH---
T ss_pred CCEEEEEECCcHHHHHHHHHH-cCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999865 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
||+.+++|.||++...++.. ..|++++.++.+|...|+
T Consensus 206 -aG~~~i~v~~g~~~~~~~~~--~~ad~vi~~~~el~~~l~ 243 (243)
T 2hsz_A 206 -AGCAVVGLTYGYNYNIPIAQ--SKPDWIFDDFADILKITQ 243 (243)
T ss_dssp -HTCEEEEESSSCSTTCCGGG--GCCSEEESSGGGGGGGTC
T ss_pred -CCCeEEEEcCCCCchhhhhh--CCCCEEECCHHHHHHHhC
Confidence 89999999999976544433 346799999999987764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=226.28 Aligned_cols=207 Identities=16% Similarity=0.169 Sum_probs=160.2
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+|||||||+||-+.+..+.+.+++++. ... .... ++.+.|.+....+ ...+..
T Consensus 19 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g-------~~~-------~~~~------~~~~~g~~~~~~~-~~~~~~-- 75 (237)
T 4ex6_A 19 DRGVILDLDGTLADTPAAIATITAEVLAAMG-------TAV-------SRGA------ILSTVGRPLPASL-AGLLGV-- 75 (237)
T ss_dssp CEEEEECSBTTTBCCHHHHHHHHHHHHHHTT-------CCC-------CHHH------HHHHTTSCHHHHH-HHHHTS--
T ss_pred CCEEEEcCCCCCcCCHHHHHHHHHHHHHHcC-------CCC-------CHHH------HHHhcCccHHHHH-HHHhCC--
Confidence 3899999999999999999999999999983 111 1123 4556777776544 122211
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.. +.+...+....+.+.|.+.+.. .....+|||+.++|+ ++|
T Consensus 76 -----------~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g 120 (237)
T 4ex6_A 76 -----------PV----------------------EDPRVAEATEEYGRRFGAHVRA--AGPRLLYPGVLEGLDRLSAAG 120 (237)
T ss_dssp -----------CT----------------------TSHHHHHHHHHHHHHHHHHHHH--HGGGGBCTTHHHHHHHHHHTT
T ss_pred -----------CC----------------------CHHHHHHHHHHHHHHHHHhccc--ccCCccCCCHHHHHHHHHhCC
Confidence 00 1112222233334444332210 034689999999999 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++...++.++++ +|+..+|+.+++++ .||||+++..+++++|++|++|+||||+.+|+.+|++
T Consensus 121 ~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~---- 195 (237)
T 4ex6_A 121 FRLAMATSKVEKAARAIAEL-TGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRA---- 195 (237)
T ss_dssp EEEEEECSSCHHHHHHHHHH-HTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----
T ss_pred CcEEEEcCCChHHHHHHHHH-cCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH----
Confidence 99999999999999999996 99999999999876 3599999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||++..+++.... |++++.++.+|.+.|
T Consensus 196 aG~~~i~v~~g~~~~~~~~~~~--ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 196 AGMTVIGVSYGVSGPDELMRAG--ADTVVDSFPAAVTAV 232 (237)
T ss_dssp TTCEEEEESSSSSCHHHHHHTT--CSEEESSHHHHHHHH
T ss_pred CCCeEEEEecCCCCHHHHHhcC--CCEEECCHHHHHHHH
Confidence 9999999999999888887754 559999999998765
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=229.80 Aligned_cols=199 Identities=18% Similarity=0.242 Sum_probs=155.2
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+|||||||+||-+.+..+.+.+++.+ |++.. ..+. ++.++|.+...++ .+.+..
T Consensus 3 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~-~~~~~~-- 60 (222)
T 2nyv_A 3 LRVILFDLDGTLIDSAKDIALALEKTLKEL------GLEEY-------YPDN------VTKYIGGGVRALL-EKVLKD-- 60 (222)
T ss_dssp ECEEEECTBTTTEECHHHHHHHHHHHHHHT------TCGGG-------CCSC------GGGGCSSCHHHHH-HHHHGG--
T ss_pred CCEEEECCCCcCCCCHHHHHHHHHHHHHHc------CCCCC-------CHHH------HHHHhCcCHHHHH-HHHhCh--
Confidence 589999999999999999999999999988 44321 1133 5667787765543 222210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
... ++....+++.|. .......++|||+.++|+ ++|
T Consensus 61 ------------~~~-------------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g 99 (222)
T 2nyv_A 61 ------------KFR-------------------------EEYVEVFRKHYL----ENPVVYTKPYPEIPYTLEALKSKG 99 (222)
T ss_dssp ------------GCC-------------------------THHHHHHHHHHH----HCSCSSCEECTTHHHHHHHHHHTT
T ss_pred ------------HHH-------------------------HHHHHHHHHHHH----HhccccCccCCCHHHHHHHHHHCC
Confidence 000 011122333333 233345789999999999 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++++||||+.+|+.+|++
T Consensus 100 ~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~---- 174 (222)
T 2nyv_A 100 FKLAVVSNKLEELSKKILDI-LNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKR---- 174 (222)
T ss_dssp CEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----
T ss_pred CeEEEEcCCCHHHHHHHHHH-cCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHH----
Confidence 99999999999999999996 99999999999865 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||++..+. ..|++++.++.++.+.|
T Consensus 175 aG~~~i~v~~g~~~~~~-----~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 175 AGTKTALALWGYVKLNS-----QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HTCEEEEETTSSCSCCC-----CCCSEEESSTTHHHHHH
T ss_pred CCCeEEEEcCCCCCccc-----cCCCEEECCHHHHHHHH
Confidence 89999999999976543 56789999999987654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-30 Score=218.61 Aligned_cols=209 Identities=16% Similarity=0.082 Sum_probs=161.9
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+|+-+.+..+...+++++ |++.. ... ++.++|.+....+ ...+...
T Consensus 5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~ 63 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAE------NIPLA--------MWR------IHRKIGMSGGLML-KSLSRET 63 (233)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHHHHT------TCCCC--------HHH------HHHHTTSCHHHHH-HHHHHC-
T ss_pred cCcEEEEcCCCccccChHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHcCCcHHHHH-HHHHHhc
Confidence 4589999999999999999999999999998 44321 123 4445676655433 1222110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
+. ..+.+...+....+.+.|.+. .....+|||+.++|+ ++
T Consensus 64 ------------~~--------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~ 106 (233)
T 3s6j_A 64 ------------GM--------------------SITDEQAERLSEKHAQAYERL-----QHQIIALPGAVELLETLDKE 106 (233)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHHHHHT-----GGGCEECTTHHHHHHHHHHT
T ss_pred ------------CC--------------------CCCHHHHHHHHHHHHHHHHHh-----hccCccCCCHHHHHHHHHHC
Confidence 00 012333333344444444332 234689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||.+...++.+++. +|+..+|+.+++++ .||||+.+..+++++|++|++++||||+.+|+.+|++
T Consensus 107 g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~--- 182 (233)
T 3s6j_A 107 NLKWCIATSGGIDTATINLKA-LKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARR--- 182 (233)
T ss_dssp TCCEEEECSSCHHHHHHHHHT-TTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH---
T ss_pred CCeEEEEeCCchhhHHHHHHh-cchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHH---
Confidence 999999999999999999996 99999999999865 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
+|+++|+|.||++..+++...+ |++++.++.+|.+.|+
T Consensus 183 -aG~~~i~v~~g~~~~~~l~~~~--ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 183 -CKATGVGLLSGGYDIGELERAG--ALRVYEDPLDLLNHLD 220 (233)
T ss_dssp -TTCEEEEEGGGSCCHHHHHHTT--CSEEESSHHHHHHTGG
T ss_pred -CCCEEEEEeCCCCchHhHHhcC--CCEEECCHHHHHHHHH
Confidence 9999999999999998888765 5599999999987663
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=228.08 Aligned_cols=201 Identities=16% Similarity=0.152 Sum_probs=143.9
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||.+.+..|.+.+++++ |++.. ... .+.+.|.+....+ .+.+...
T Consensus 25 MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~ 83 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYYHYMAWRKLAHKV------GIDID--------TKF------NESLKGISRMESL-DRILEFG 83 (250)
T ss_dssp CCCEEEECTBTTTBCCHHHHHHHHHHHHHTT------TCCCC--------TTG------GGGTTTCCHHHHH-HHHHHHT
T ss_pred hhheeeecCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHhCcchHHHH-HHhhhhh
Confidence 7899999999999999999999999999998 44321 112 3445565544332 1222110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
...++++............+.|...+.. .....+|||+.++|+ ++
T Consensus 84 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~ll~~Lk~~ 131 (250)
T 4gib_A 84 ------------------------------NKKYSFSEEEKVRMAEEKNNYYVSLIDE--ITSNDILPGIESLLIDVKSN 131 (250)
T ss_dssp ------------------------------TCTTTSCHHHHHHHHHHHHHHHHHHHTT--CCGGGSCTTHHHHHHHHHHT
T ss_pred ------------------------------cCCCCCCHHHHHHHHHHHHHHHHHHHhh--ccccccchhHHHHHHHHHhc
Confidence 0001112222222233333333332221 223579999999998 79
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++++||++. +..+|++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+|||||.+|+++|++
T Consensus 132 g~~i~i~~~~~~--~~~~L~~-~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~--- 205 (250)
T 4gib_A 132 NIKIGLSSASKN--AINVLNH-LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINS--- 205 (250)
T ss_dssp TCEEEECCSCTT--HHHHHHH-HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH---
T ss_pred ccccccccccch--hhhHhhh-cccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHH---
Confidence 999999988765 5678996 99999999999865 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
|||++|+|. +.+++. .|++++.++.+|
T Consensus 206 -aG~~~i~v~----~~~~~~----~ad~vi~~l~eL 232 (250)
T 4gib_A 206 -ANMFSVGVG----NYENLK----KANLVVDSTNQL 232 (250)
T ss_dssp -TTCEEEEES----CTTTTT----TSSEEESSGGGC
T ss_pred -cCCEEEEEC----ChhHhc----cCCEEECChHhC
Confidence 999999984 333332 467999999887
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-30 Score=220.59 Aligned_cols=204 Identities=19% Similarity=0.216 Sum_probs=162.7
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||-+.+..+.+.+++++ |.+. .... ++.+.|.+....+. +.
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~------g~~~--------~~~~------~~~~~g~~~~~~~~-~~---- 82 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSF------GIKE--------DLEN------LDQFIGPPLHDTFK-EY---- 82 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCC--------CGGG------GGGGSSSCHHHHHH-HT----
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHc------CCCC--------CHHH------HHHHhCccHHHHHH-HH----
Confidence 4589999999999999999999999999998 3331 1234 56677766544321 11
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
++++.+...+....+++.|.+. ......+|||+.++|+ ++
T Consensus 83 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~ 125 (240)
T 3sd7_A 83 ---------------------------------YKFEDKKAKEAVEKYREYFADK----GIFENKIYENMKEILEMLYKN 125 (240)
T ss_dssp ---------------------------------SCCCHHHHHHHHHHHHHHHHHT----GGGCCEECTTHHHHHHHHHHT
T ss_pred ---------------------------------hCCCHHHHHHHHHHHHHHHHHh----cccccccCccHHHHHHHHHHC
Confidence 1223333344444455554432 3345789999999998 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhccC
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~ 232 (274)
|++++|+||.+...++.+++. +|+..+|+.+++++ .||+|+++..+++++|++ |++++||||+.+|+++|++
T Consensus 126 g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~-- 202 (240)
T 3sd7_A 126 GKILLVATSKPTVFAETILRY-FDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKK-- 202 (240)
T ss_dssp TCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHH--
T ss_pred CCeEEEEeCCcHHHHHHHHHH-cCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHH--
Confidence 999999999999999999996 99999999999865 359999999999999999 9999999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+++|+|.||++..+++.... |++++.++.+|.+.|
T Consensus 203 --aG~~~i~v~~g~~~~~~~~~~~--ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 203 --IGIDSIGVLYGYGSFEEISESE--PTYIVENVESIKDIL 239 (240)
T ss_dssp --HTCEEEEESSSSCCHHHHHHHC--CSEEESSSTTHHHHH
T ss_pred --CCCCEEEEeCCCCCHHHHhhcC--CCEEECCHHHHHHHh
Confidence 9999999999999988876554 569999999998765
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-30 Score=224.90 Aligned_cols=216 Identities=14% Similarity=0.076 Sum_probs=163.0
Q ss_pred CceEEEecCcccccCHHHH-HHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCEET-ALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di-~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
.|+|+||+||||+||-+.+ ..+++.+++++ |++.. ... ++.++|.+....+ ...+.
T Consensus 14 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~~~~~~~~~-~~~~~-- 70 (277)
T 3iru_A 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQE------GIEVT--------QAE------AREPMGTEKSEHI-RRMLG-- 70 (277)
T ss_dssp CCEEEEESBTTTBSTTCCHHHHHHHHHHHTT------TCCCC--------HHH------HHTTTTSCHHHHH-HHHTT--
T ss_pred CcEEEEcCCCCcccCCcccHHHHHHHHHHHh------CCCCC--------HHH------HHHHhcCchHHHH-HHhcc--
Confidence 4899999999999986544 78888888888 44421 234 6778888776544 12210
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhh--ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--- 155 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--- 155 (274)
..... ..+...+ ..+.+...+....+.+.|.+.+ .....+|||+.++|+
T Consensus 71 ---------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~ 124 (277)
T 3iru_A 71 ---------------NSRIA-------NAWLSIKGQASNEEDIKRLYDLFAPIQTRIV----AQRSQLIPGWKEVFDKLI 124 (277)
T ss_dssp ---------------SHHHH-------HHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH----HHTCCBCTTHHHHHHHHH
T ss_pred ---------------chHHH-------HHHHHHhccCCCHHHHHHHHHHHHHHHHHHh----hccCccCcCHHHHHHHHH
Confidence 00111 1111222 2345555555666666555443 334789999999998
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCC-CceEecCC----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHHhh
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTIT-PDRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVI 229 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~-f~~v~g~~----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~ 229 (274)
++|++++|+||++...++.+++. +|+..+ |+.+++++ .||||+++..+++++|++| ++|+||||+.+|+++|+
T Consensus 125 ~~g~~~~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~ 203 (277)
T 3iru_A 125 AQGIKVGGNTGYGPGMMAPALIA-AKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGL 203 (277)
T ss_dssp HTTCEEEEECSSCHHHHHHHHHH-HHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHH
T ss_pred HcCCeEEEEeCCchHHHHHHHHh-cCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHH
Confidence 78999999999999999999996 999888 89999865 3599999999999999999 99999999999999999
Q ss_pred ccCccCCCcEEEEeCCCC-----------------------ChHHHHhcCCCCCceeechhHHHhhc
Q 024003 230 KEPELDGWNLYLVDWGYN-----------------------TPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~-----------------------~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+ ||+++|+|.||++ ..+++...+ |++++.|+.+|...|
T Consensus 204 ~----aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--ad~v~~~~~el~~~l 264 (277)
T 3iru_A 204 R----AGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAG--AHYVIDSVADLETVI 264 (277)
T ss_dssp H----TTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHT--CSEEESSGGGTHHHH
T ss_pred H----CCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCC--CCEEecCHHHHHHHH
Confidence 8 9999999999986 345666654 669999999987655
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=217.23 Aligned_cols=200 Identities=15% Similarity=0.166 Sum_probs=151.9
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||-+.+..+.+.+++++ |.+.. ... ++.++|.+...++ +.+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~--- 57 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATY------GKPFS--------PAQ------AQKTFPMAAEQAM--TEL--- 57 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTT------TCCCC--------HHH------HHHHTTSCHHHHH--HHT---
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHh------CCCCC--------HHH------HHHHcCCcHHHHH--HHc---
Confidence 3599999999999999999999999999888 33221 123 4556666554332 111
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
+. +.+...+.+..+.+.+.. +.....++||+.++|+ ++
T Consensus 58 ------------~~----------------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~ 98 (209)
T 2hdo_A 58 ------------GI----------------------AASEFDHFQAQYEDVMAS-----HYDQIELYPGITSLFEQLPSE 98 (209)
T ss_dssp ------------TC----------------------CGGGHHHHHHHHHHHHTT-----CGGGCEECTTHHHHHHHSCTT
T ss_pred ------------CC----------------------CHHHHHHHHHHHHHHHhh-----hcccCCcCCCHHHHHHHHHhc
Confidence 11 111111122222232221 2234689999999999 56
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++.++++++|++|++++||||+.+|+.+|++
T Consensus 99 -~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~--- 173 (209)
T 2hdo_A 99 -LRLGIVTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQA--- 173 (209)
T ss_dssp -SEEEEECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH---
T ss_pred -CcEEEEeCCCHHHHHHHHHH-cChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHH---
Confidence 99999999999999999996 99999999999764 4689999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
||++++++.||++..+++.. |++++.++.+|.+.|+
T Consensus 174 -aG~~~~~~~~~~~~~~~~~~----a~~~~~~~~el~~~l~ 209 (209)
T 2hdo_A 174 -ANVDFGLAVWGMDPNADHQK----VAHRFQKPLDILELFK 209 (209)
T ss_dssp -HTCEEEEEGGGCCTTGGGSC----CSEEESSGGGGGGGC-
T ss_pred -cCCeEEEEcCCCCChhhhcc----CCEEeCCHHHHHHhhC
Confidence 89999999999987665542 7899999999987764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=215.39 Aligned_cols=210 Identities=13% Similarity=0.035 Sum_probs=151.0
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHH-hCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARV-RWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~-~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|.|+|+|||||||+||-+.+..+.+.++++ + |.+.. .. ++.+.|......+ ...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~~---------~~------~~~~~g~~~~~~~-~~~~~~ 60 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVY------GTEGS---------TG------SHDFSGKMDGAII-YEVLSN 60 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHH------SCCCC---------C---------CCTTCCHHHHH-HHHHHT
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHh------CCCCc---------cc------hhhhcCCChHHHH-HHHHHH
Confidence 469999999999999999999999999988 5 22210 12 4556677655432 122211
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccC-CCCCCCccHHHHHH---
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWI-GANRLYPGVSDALK--- 155 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~-~~~~lypGv~e~L~--- 155 (274)
. +...... ++...+....+.+.|. +... ....++||+.++|+
T Consensus 61 ~------------~~~~~~~------------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~ 106 (234)
T 2hcf_A 61 V------------GLERAEI------------------ADKFDKAKETYIALFR----ERARREDITLLEGVRELLDALS 106 (234)
T ss_dssp T------------TCCHHHH------------------HHHHHHHHHHHHHHHH----HHCCGGGEEECTTHHHHHHHHH
T ss_pred c------------CCCcccc------------------hhHHHHHHHHHHHHHH----HHhccCCCCcCCCHHHHHHHHH
Confidence 0 1100000 1112222233333332 2222 34579999999999
Q ss_pred hC-CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C--C--CcHHHHHHHHhhCC--CCCCcEEEEcCChhHHHH
Q 024003 156 LA-SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T--G--PKVNVLKQLQKKPE--HQGLRLHFVEDRLATLKN 227 (274)
Q Consensus 156 ~~-g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~--~--pkp~~l~~~l~~l~--~~~~~~l~VGDs~~Di~a 227 (274)
++ |++++|+||++...++..++. +|+..+|+.++.++ . + |+|+.+..+++++| ++|++|+||||+.+|+.+
T Consensus 107 ~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~ 185 (234)
T 2hcf_A 107 SRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRC 185 (234)
T ss_dssp TCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHH
T ss_pred hCCCceEEEEcCCcHHHHHHHHHH-CCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHH
Confidence 67 899999999999999999996 99999999766543 2 2 56788999999999 899999999999999999
Q ss_pred hhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 228 VIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 228 A~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|++ ||+++++|.||+...+++... .|++++.|+.+|.+.|
T Consensus 186 a~~----aG~~~i~v~~~~~~~~~~~~~--~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 186 ARE----LDARSIAVATGNFTMEELARH--KPGTLFKNFAETDEVL 225 (234)
T ss_dssp HHT----TTCEEEEECCSSSCHHHHHTT--CCSEEESCSCCHHHHH
T ss_pred HHH----CCCcEEEEcCCCCCHHHHHhC--CCCEEeCCHHhHHHHH
Confidence 998 999999999999888777653 4669999999887654
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-29 Score=214.97 Aligned_cols=206 Identities=12% Similarity=0.047 Sum_probs=155.6
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+||-+.+..+.+.+++++ |++.. ... ++...|......+ ...+....
T Consensus 24 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~~ 82 (243)
T 3qxg_A 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTH------GLDLS--------REE------AYMHEGRTGASTI-NIVFQREL 82 (243)
T ss_dssp CCEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------HHH------HHHTTTSCHHHHH-HHHHHHHH
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHHHh------CCCCC--------HHH------HHHHhCCCHHHHH-HHHHHHHh
Confidence 489999999999999999999999999998 44321 112 2233443332221 11111000
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
+. ..+.+.+.+....+.+.|.. .....+|||+.++|+ ++|
T Consensus 83 -----------~~--------------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~g 125 (243)
T 3qxg_A 83 -----------GK--------------------EATQEEIESIYHEKSILFNS------YPEAERMPGAWELLQKVKSEG 125 (243)
T ss_dssp -----------SS--------------------CCCHHHHHHHHHHHHHHHHT------SSCCCBCTTHHHHHHHHHHTT
T ss_pred -----------CC--------------------CCCHHHHHHHHHHHHHHHHh------cccCCCCCCHHHHHHHHHHcC
Confidence 00 11333334444444443322 134689999999998 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCC--ceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f--~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
++++|+||++...+...++ . |+..+| +.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++
T Consensus 126 ~~~~i~t~~~~~~~~~~l~-~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~-- 201 (243)
T 3qxg_A 126 LTPMVVTGSGQLSLLERLE-H-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHK-- 201 (243)
T ss_dssp CEEEEECCCCCHHHHTTHH-H-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHH--
T ss_pred CcEEEEeCCcHHHHHHHHH-H-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH--
Confidence 9999999999999999999 5 999999 8898865 3599999999999999999999999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||+...+++.... |++++.++.+|.+.|
T Consensus 202 --aG~~~i~v~~~~~~~~~l~~~~--ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 202 --AGIFTIAVNTGPLDGQVLLDAG--ADLLFPSMQTLCDSW 238 (243)
T ss_dssp --TTCEEEEECCSSSCHHHHHHTT--CSEEESCHHHHHHHH
T ss_pred --CCCEEEEEeCCCCCHHHHHhcC--CCEEECCHHHHHHHH
Confidence 9999999999999888887754 569999999997765
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-29 Score=214.46 Aligned_cols=206 Identities=14% Similarity=0.062 Sum_probs=152.1
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+||-+.+..+.+.+++++ |++.. ... ++...|......+ ...+....
T Consensus 23 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~~ 81 (247)
T 3dv9_A 23 LKAVLFDMDGVLFDSMPNHAESWHKIMKRF------GFGLS--------REE------AYMHEGRTGASTI-NIVSRRER 81 (247)
T ss_dssp CCEEEEESBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------HHH------HHHTTTSCHHHHH-HHHHHHHH
T ss_pred CCEEEECCCCccCcCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHhCCChHHHH-HHHHHHhc
Confidence 489999999999999999999999999998 34322 112 2333444332221 11111000
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
+. ..+.+.+.+....+.+.|. . .....+|||+.++|+ ++|
T Consensus 82 -----------~~--------------------~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~l~~l~~~g 124 (247)
T 3dv9_A 82 -----------GH--------------------DATEEEIKAIYQAKTEEFN----K--CPKAERMPGALEVLTKIKSEG 124 (247)
T ss_dssp -----------SS--------------------CCCHHHHHHHHHHHHHHHT----T--SCCCCBCTTHHHHHHHHHHTT
T ss_pred -----------CC--------------------CCCHHHHHHHHHHHHHHHH----h--cccCCCCCCHHHHHHHHHHcC
Confidence 00 1133333344444433332 2 134689999999998 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCC--ceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f--~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
++++|+||.+...+...++ . |+..+| +.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++
T Consensus 125 ~~~~i~t~~~~~~~~~~l~-~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~-- 200 (247)
T 3dv9_A 125 LTPMVVTGSGQTSLLDRLN-H-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVA-- 200 (247)
T ss_dssp CEEEEECSCC---CHHHHH-H-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH--
T ss_pred CcEEEEcCCchHHHHHHHH-h-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHH--
Confidence 9999999999999999999 5 999999 8898765 3599999999999999999999999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||+...+++.... |++++.|+.+|.+.|
T Consensus 201 --aG~~~i~v~~~~~~~~~l~~~~--ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 201 --AGIFTIAVNTGPLHDNVLLNEG--ANLLFHSMPDFNKNW 237 (247)
T ss_dssp --TTSEEEEECCSSSCHHHHHTTT--CSEEESSHHHHHHHH
T ss_pred --CCCeEEEEcCCCCCHHHHHhcC--CCEEECCHHHHHHHH
Confidence 9999999999999888877644 669999999997654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-29 Score=207.66 Aligned_cols=204 Identities=13% Similarity=0.062 Sum_probs=150.8
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||-+.+..+.+.+++++ |++.. ... ++.+.|.+.+..+ +.+...
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~ 61 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQK------GISID--------HLP------PSFFIGGNTKQVW--ENILRD 61 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHT------TCCCT--------TSC------HHHHTTSCGGGCH--HHHHGG
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHcCCCHHHHH--HHHHHh
Confidence 6799999999999999999999999999998 33221 122 4445565554432 222110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. +. ..+.++ ....+.+.+.+... .....+|||+.++|+ ++
T Consensus 62 ~-----------~~--------------------~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~ 104 (214)
T 3e58_A 62 E-----------YD--------------------KWDVST---LQEEYNTYKQNNPL---PYKELIFPDVLKVLNEVKSQ 104 (214)
T ss_dssp G-----------GG--------------------GSCHHH---HHHHHHHHHHHSCC---CHHHHBCTTHHHHHHHHHHT
T ss_pred h-----------cC--------------------CCCHHH---HHHHHHHHHHHhhc---ccCCCcCchHHHHHHHHHHC
Confidence 0 00 001111 11222232222111 112379999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||.+...++.++++ +|+..+|+.+++++ .||+|+.+..+++++|++|++++||||+.+|+.+|++
T Consensus 105 g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~--- 180 (214)
T 3e58_A 105 GLEIGLASSSVKADIFRALEE-NRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA--- 180 (214)
T ss_dssp TCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH---
T ss_pred CCCEEEEeCCcHHHHHHHHHH-cCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHH---
Confidence 999999999999999999996 99999999999865 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|++++++.+|...... ..|++++.|+.+|.+.|
T Consensus 181 -aG~~~~~~~~~~~~~~~-----~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 181 -ADVEVWAIRDNEFGMDQ-----SAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp -TTCEEEEECCSSSCCCC-----TTSSEEESSGGGGGGGC
T ss_pred -CCCEEEEECCCCccchh-----ccHHHHHHHHHHHHhhC
Confidence 99999999998644322 56789999999997654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=214.79 Aligned_cols=204 Identities=15% Similarity=0.121 Sum_probs=154.7
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+|||||||+|+-..+..+.+.+++++ |++... ... ++.+.|.+....+ ...+...
T Consensus 28 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~~- 86 (259)
T 4eek_A 28 FDAVLFDLDGVLVESEGIIAQVWQSVLAER------GLHLDL-------TEI------AMYFTGQRFDGVL-AYLAQQH- 86 (259)
T ss_dssp CSEEEEESBTTTEECHHHHHHHHHHHHHHT------TCCCCH-------HHH------HHHTTTCCHHHHH-HHHHHHH-
T ss_pred CCEEEECCCCCcccCHHHHHHHHHHHHHHh------CCCCCH-------HHH------HHHHhCCCHHHHH-HHHHHHc-
Confidence 489999999999999999999999999998 343211 122 3446666665543 1221110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
+.. .+.+. ...+.+.|.+.+ ....+|||+.++|+ ++|
T Consensus 87 -----------~~~--------------------~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~g 126 (259)
T 4eek_A 87 -----------DFV--------------------PPPDF----LDVLETRFNAAM-----TGVTAIEGAAETLRALRAAG 126 (259)
T ss_dssp -----------CCC--------------------CCTTH----HHHHHHHHHHHH-----TTCEECTTHHHHHHHHHHHT
T ss_pred -----------CCC--------------------CCHHH----HHHHHHHHHHHh-----ccCCcCccHHHHHHHHHHCC
Confidence 100 01111 122333333322 34689999999998 679
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCce-EecCC-----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDR-LYGLG-----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~-v~g~~-----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
++++|+||.+...++.+++. +|+..+|+. +++.+ .||+|+.+..+++++|++|++|+||||+.+|+++|++
T Consensus 127 ~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~-- 203 (259)
T 4eek_A 127 VPFAIGSNSERGRLHLKLRV-AGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLA-- 203 (259)
T ss_dssp CCEEEECSSCHHHHHHHHHH-TTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH--
T ss_pred CeEEEEeCCCHHHHHHHHHh-cChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH--
Confidence 99999999999999999996 999999998 88653 3599999999999999999999999999999999998
Q ss_pred ccCCCcEEEEeCCCCC----hHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNT----PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~----~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||... .+++...+ |++++.++.+|.+.|
T Consensus 204 --aG~~~i~v~~g~~~~~~~~~~~~~~~--ad~vi~~l~el~~~l 244 (259)
T 4eek_A 204 --AGATLWGLLVPGHPHPDGAAALSRLG--AARVLTSHAELRAAL 244 (259)
T ss_dssp --HTCEEEEECCTTSCCSSCHHHHHHHT--CSEEECSHHHHHHHH
T ss_pred --CCCEEEEEccCCCcccccHHHHHhcC--cchhhCCHHHHHHHH
Confidence 99999999999766 66776665 569999999997765
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=212.38 Aligned_cols=203 Identities=13% Similarity=0.087 Sum_probs=150.6
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+||-+.+..+.+.+++++ |++.. ... ++.+.|.+....+ ...+...
T Consensus 30 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~- 87 (250)
T 3l5k_A 30 VTHLIFDMDGLLLDTERLYSVVFQEICNRY------DKKYS--------WDV------KSLVMGKKALEAA-QIIIDVL- 87 (250)
T ss_dssp CSEEEEETBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHH------HHHHTTCCHHHHH-HHHHHHH-
T ss_pred CcEEEEcCCCCcCCCHHHHHHHHHHHHHHh------CCCCC--------HHH------HHHhcCCCHHHHH-HHHHHHh-
Confidence 489999999999999999999999999998 33321 123 4556676655433 1222110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
+.. .+.+++ ...+++.|.+.+ ....+|||+.++|+ ++|
T Consensus 88 -----------~~~--------------------~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~g 128 (250)
T 3l5k_A 88 -----------QLP--------------------MSKEEL---VEESQTKLKEVF-----PTAALMPGAEKLIIHLRKHG 128 (250)
T ss_dssp -----------TCS--------------------SCHHHH---HHHHHHHHHHHG-----GGCCBCTTHHHHHHHHHHTT
T ss_pred -----------CCC--------------------CCHHHH---HHHHHHHHHHHh-----ccCCCCCCHHHHHHHHHhCC
Confidence 000 011111 122233333222 24689999999998 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC------CCCcHHHHHHHHhhCCCCC--CcEEEEcCChhHHHHhhc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~------~~pkp~~l~~~l~~l~~~~--~~~l~VGDs~~Di~aA~~ 230 (274)
++++|+||.+...+...+.+++|+..+|+.+++++ .||+|+++..+++++|++| ++|+||||+.+|+++|++
T Consensus 129 ~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~ 208 (250)
T 3l5k_A 129 IPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALA 208 (250)
T ss_dssp CCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHH
T ss_pred CcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHH
Confidence 99999999998888877753368889999998765 2599999999999999998 999999999999999998
Q ss_pred cCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 231 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++++|.||....+ ....|++++.|+.+|...|
T Consensus 209 ----aG~~~i~v~~~~~~~~----~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 209 ----AGMQVVMVPDGNLSRD----LTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp ----TTCEEEECCCTTSCGG----GSTTSSEECSCGGGCCGGG
T ss_pred ----cCCEEEEEcCCCCchh----hcccccEeecCHHHhhHHH
Confidence 9999999999987653 3456789999999986543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-28 Score=209.59 Aligned_cols=124 Identities=15% Similarity=0.113 Sum_probs=109.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i 171 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL 171 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999999 68999999999999999999996 99999999998754 36999999999999999999999
Q ss_pred EEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+. +|+.+|++ ||+.+++|.||+...+++. ....|++++.++.+|.+.|
T Consensus 172 ~iGD~~~~Di~~a~~----aG~~~~~v~~g~~~~~~~~-~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 172 MVGDRLYSDIYGAKR----VGMKTVWFRYGKHSERELE-YRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp EEESCTTTTHHHHHH----TTCEEEEECCSCCCHHHHT-TGGGCSEEESSTTHHHHHH
T ss_pred EECCCchHhHHHHHH----CCCEEEEECCCCCCccccc-ccCCCCEEECCHHHHHHHH
Confidence 999998 99999998 9999999999998876652 1124679999999987654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=212.42 Aligned_cols=123 Identities=13% Similarity=0.104 Sum_probs=106.4
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..++|||+.++|+ +++++++|+||++...++.+|++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 119 ~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 119 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 4689999999999 56799999999999999999996 99999999988754 36999999999999999999999
Q ss_pred EEcCC-hhHHHHhhccCccCCC-cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDR-LATLKNVIKEPELDGW-NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs-~~Di~aA~~~~~~Agv-~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+ .+|+++|++ ||+ .+|+|.||.... + .....|++++.++.+|...|
T Consensus 198 ~vGDs~~~Di~~A~~----aG~~~~i~v~~~~~~~-~--~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 198 MVGDTLETDIQGGLN----AGLKATVWINKSGRVP-L--TSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp EEESCTTTHHHHHHH----TTCSEEEEECTTCCCC-S--SCCCCCSEEESSGGGHHHHH
T ss_pred EECCCchhhHHHHHH----CCCceEEEEcCCCCCc-C--cccCCCCEEECCHHHHHHHH
Confidence 99995 999999998 999 899999885431 1 12346889999999986654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-28 Score=203.43 Aligned_cols=205 Identities=15% Similarity=0.106 Sum_probs=152.5
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+|||||||+||-+.+..+...+++++ |.+... ... ++.++|.+....+ ...+ .
T Consensus 6 ~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~-~~~~-~-- 62 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSSRGIVTCFRSVLERH------GYTGIT-------DDM------IKRTIGKTLEESF-SILT-G-- 62 (225)
T ss_dssp CSEEEECCBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHH------HHTTTTSCHHHHH-HHHH-C--
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHHHHh------CCCCCC-------HHH------HHHHhCCcHHHHH-HHHc-C--
Confidence 589999999999999999999999999888 332211 123 4446676665433 1221 1
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.. +..........+...|. ..+.....++||+.++|+ ++|
T Consensus 63 ------------~~---------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g 105 (225)
T 3d6j_A 63 ------------IT---------------------DADQLESFRQEYSKEAD----IYMNANTILFPDTLPTLTHLKKQG 105 (225)
T ss_dssp ------------CC---------------------CHHHHHHHHHHHHHHHH----HHTGGGCEECTTHHHHHHHHHHHT
T ss_pred ------------CC---------------------CHHHHHHHHHHHHHHHH----HhccccCccCcCHHHHHHHHHHCC
Confidence 00 01111111222223332 223334678999999998 689
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||.+...++..++. +|+..+|+.+++.+ .||+|+.+..+++++|++|+++++|||+.+|+.+|++
T Consensus 106 ~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~---- 180 (225)
T 3d6j_A 106 IRIGIISTKYRFRILSFLRN-HMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA---- 180 (225)
T ss_dssp CEEEEECSSCHHHHHHHHHT-SSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----
T ss_pred CeEEEEECCCHHHHHHHHHH-cCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----
Confidence 99999999999999999996 99999999998754 3599999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+++++|.||++..+++...+ |++++.++.++.+.|
T Consensus 181 aG~~~~~~~~~~~~~~~l~~~~--ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 181 AGVSFTGVTSGMTTAQEFQAYP--YDRIISTLGQLISVP 217 (225)
T ss_dssp HTCEEEEETTSSCCTTGGGGSC--CSEEESSGGGGC---
T ss_pred CCCeEEEECCCCCChHHHhhcC--CCEEECCHHHHHHhh
Confidence 9999999999998877776554 559999999987655
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=208.62 Aligned_cols=216 Identities=12% Similarity=0.033 Sum_probs=156.6
Q ss_pred CceEEEecCcccccCHH-HHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~-di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
.|+|+|||||||+||-. .+..+.+.+++++ |++.. ... ++.++|.+....+ ...+ .
T Consensus 6 ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~------G~~~~--------~~~------~~~~~g~~~~~~~-~~~~-~- 62 (267)
T 1swv_A 6 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKR------GVAIT--------AEE------ARKPMGLLKIDHV-RALT-E- 62 (267)
T ss_dssp CCEEEECSBTTTBSTTCCTTHHHHHHHHHTT------TCCCC--------HHH------HHTTTTSCHHHHH-HHHH-H-
T ss_pred ceEEEEecCCCEEeCCCccHHHHHHHHHHHc------CCCCC--------HHH------HHHHhccchHHHH-HHhc-c-
Confidence 48999999999999987 6788889998887 44321 134 5567777655433 1221 1
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhc--cCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--- 155 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--- 155 (274)
+ ..... .+...++ .+.+...+....+.+.|... +.....+|||+.++|+
T Consensus 63 ------------~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~ 116 (267)
T 1swv_A 63 ------------M---PRIAS-------EWNRVFRQLPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLR 116 (267)
T ss_dssp ------------S---HHHHH-------HHHHHHSSCCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHH
T ss_pred ------------c---HHHHH-------HHHHHhCCCCCHHHHHHHHHHHHHHHHHh----hccccccCccHHHHHHHHH
Confidence 0 00000 0111111 23334444444444444332 2334689999999998
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHHhh
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVI 229 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~ 229 (274)
++|++++|+||++...++.+++. +|+..+| +.+++.+ .+|||+.+..+++++|++| ++|+||||+.+|+.+|+
T Consensus 117 ~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~ 195 (267)
T 1swv_A 117 ERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGR 195 (267)
T ss_dssp HTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHH
T ss_pred HcCCeEEEEcCCCHHHHHHHHHH-cCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHH
Confidence 78999999999999999999996 8888886 8888764 3599999999999999999 99999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCC-----------------------hHHHHhcCCCCCceeechhHHHhhc
Q 024003 230 KEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~-----------------------~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+ ||+++++|.||++. .+++...+ |++++.++.+|...|
T Consensus 196 ~----aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--ad~v~~~~~el~~~l 256 (267)
T 1swv_A 196 N----AGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENG--AHFTIETMQELESVM 256 (267)
T ss_dssp H----TTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT--CSEEESSGGGHHHHH
T ss_pred H----CCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC--CceeccCHHHHHHHH
Confidence 8 99999999999874 44555544 569999999987654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=203.98 Aligned_cols=219 Identities=13% Similarity=0.113 Sum_probs=155.4
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+||+||||+|+-+.+..+...+++.+... +. . +....|..+..+. ..+...
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~---~~-------------~------~~~~~~~~~~~~~--~~~~~~ 56 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQ---AP-------------K------LGPVPVEHLWEIR--SRLLDE 56 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHH---CT-------------T------TCSCCHHHHHHHH--HHHHHH
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHh---cC-------------c------chhhHHHHHHHHH--HHHHHh
Confidence 7899999999999999998887777666665100 00 0 0111122222211 111110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LAS 158 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g 158 (274)
.+ . ........+.......+..++++.+...+....+.+.|...+ ....+|||+.++|+ ++.
T Consensus 57 -~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~ 120 (230)
T 3vay_A 57 -DP---------S-FKHRISALRRRVLFHALEDAGYDSDEAQQLADESFEVFLHGR-----HQVQIFPEVQPTLEILAKT 120 (230)
T ss_dssp -CG---------G-GGGCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH-----TCCCBCTTHHHHHHHHHTT
T ss_pred -Cc---------c-ccccHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHhh-----ccCccCcCHHHHHHHHHhC
Confidence 00 0 000011112223345556677777777777776766665532 24689999999999 444
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPE 233 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~ 233 (274)
++++|+||.+.. ++. +|+..+|+.+++++ .||+|+++..+++++|++|++++||||+. +|+.+|++
T Consensus 121 ~~~~i~t~~~~~-----l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~--- 191 (230)
T 3vay_A 121 FTLGVITNGNAD-----VRR-LGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQ--- 191 (230)
T ss_dssp SEEEEEESSCCC-----GGG-STTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHH---
T ss_pred CeEEEEECCchh-----hhh-cCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHH---
Confidence 999999999876 675 99999999999864 36999999999999999999999999997 99999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+.+++|.||++..++ ...|++++.++.+|.+.|
T Consensus 192 -aG~~~~~v~~~~~~~~~----~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 192 -AGMRAIWYNPQGKAWDA----DRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp -TTCEEEEECTTCCCCCS----SSCCSEEESSGGGHHHHH
T ss_pred -CCCEEEEEcCCCCCCcc----cCCCCeeECCHHHHHHHH
Confidence 99999999999986544 456889999999998765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-28 Score=204.21 Aligned_cols=217 Identities=14% Similarity=0.110 Sum_probs=148.5
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+||+||||+|+-+.+..+.+.+.+.+... |.+. .....+.. .....+.++|.|..... ..+.+
T Consensus 7 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~---g~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~- 74 (234)
T 3ddh_A 7 LIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPY---GTSK----EISAALFQ--TEMNNLQILGYGAKAFT--ISMVE- 74 (234)
T ss_dssp TCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGG---SCHH----HHHHHHHH--HHHHTHHHHCSSHHHHH--HHHHH-
T ss_pred cccEEEEeCCCCCccCcchHHHHHHHHHHHHHhc---CCHH----HHHHHHHH--HHhhhhhhhcCCcchhH--HHHHH-
Confidence 4689999999999999998888877676666211 2111 01111000 00001346666654421 11110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhh--hccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEE--WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--- 155 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--- 155 (274)
..... ...+.+...+. .+.|.+. +.....+|||+.++|+
T Consensus 75 ----------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~l~~l~ 118 (234)
T 3ddh_A 75 ----------------------------TALQISNGKIAADIIRQI----VDLGKSL----LKMPIELLPGVKETLKTLK 118 (234)
T ss_dssp ----------------------------HHHHHTTTCCCHHHHHHH----HHHHHHH----TTCCCCBCTTHHHHHHHHH
T ss_pred ----------------------------HHHHHhcCCCCHHHHHHH----HHHHHHH----hhccCCcCccHHHHHHHHH
Confidence 00000 01233333332 3333322 2345789999999998
Q ss_pred hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCc
Q 024003 156 LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPE 233 (274)
Q Consensus 156 ~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~ 233 (274)
++| ++++|+||.+...++.+++. +|+..+|+.+++.. ||||+.+..+++++|++|++|+||||+. +|+.+|++
T Consensus 119 ~~g~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~-kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~--- 193 (234)
T 3ddh_A 119 ETGKYKLVVATKGDLLDQENKLER-SGLSPYFDHIEVMS-DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLS--- 193 (234)
T ss_dssp HHCCCEEEEEEESCHHHHHHHHHH-HTCGGGCSEEEEES-CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHH---
T ss_pred hCCCeEEEEEeCCchHHHHHHHHH-hCcHhhhheeeecC-CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHH---
Confidence 788 99999999999999999996 99999999999753 7999999999999999999999999996 99999998
Q ss_pred cCCCcEEEE----eCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 234 LDGWNLYLV----DWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 234 ~Agv~~i~v----~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
||+++++| +||+...+. ....|++++.|+.+|...|.
T Consensus 194 -aG~~~v~v~~~~~~g~~~~~~---~~~~~d~v~~~l~el~~~l~ 234 (234)
T 3ddh_A 194 -LGGYGVHIPFEVMWKHEVTET---FAHERLKQVKRLDDLLSLLG 234 (234)
T ss_dssp -HTCEEEECCCCTTCCCC---C---CCCTTEEECSSGGGHHHHCC
T ss_pred -CCCeEEEecCCcccccCCccc---ccCCCceecccHHHHHHhcC
Confidence 99999999 677655432 22334899999999987763
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=202.37 Aligned_cols=216 Identities=14% Similarity=0.137 Sum_probs=150.1
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+||-+.+..+.+.+++++ |++... .. .+.+.+.+.. + ...+...
T Consensus 7 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~--------~~------~~~~~~~~~~--~-~~~~~~~- 62 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQAAEALALRLLFEDQ------NIPLTN--------DM------KAQYKTINQG--L-WRAFEEG- 62 (238)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHT------TCCCCH--------HH------HHHHHHHHHH--H-HHHHHTT-
T ss_pred CCEEEEcCcCcCcCCchhHHHHHHHHHHHc------CCCcch--------HH------HHHHHHHHHH--H-HHHHHhc-
Confidence 489999999999999999999999999998 444321 11 1112221111 0 0111110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.....+.. ......+.+.+++... ...+.+.|.+.+ .....+|||+.++|+ ++
T Consensus 63 -----------~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~- 118 (238)
T 3ed5_A 63 -----------KMTRDEVV---NTRFSALLKEYGYEAD-----GALLEQKYRRFL----EEGHQLIDGAFDLISNLQQQ- 118 (238)
T ss_dssp -----------SSCHHHHH---HHHHHHHHHHTTCCCC-----HHHHHHHHHHHH----TTCCCBCTTHHHHHHHHHTT-
T ss_pred -----------cCCHHHHH---HHHHHHHHHHcCCCCc-----HHHHHHHHHHHH----HhcCCCCccHHHHHHHHHhc-
Confidence 11111111 0111222333333211 012223333222 234689999999999 55
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCC-CCCCcEEEEcCCh-hHHHHhhccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPE-HQGLRLHFVEDRL-ATLKNVIKEP 232 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~-~~~~~~l~VGDs~-~Di~aA~~~~ 232 (274)
++++|+||++...++..+++ +|+..+|+.+++++ .||+|+++..+++++| ++|++++||||+. +|+++|++
T Consensus 119 ~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~-- 195 (238)
T 3ed5_A 119 FDLYIVTNGVSHTQYKRLRD-SGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQL-- 195 (238)
T ss_dssp SEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHH--
T ss_pred CeEEEEeCCCHHHHHHHHHH-cChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHH--
Confidence 99999999999999999996 99999999999754 3599999999999999 9999999999998 99999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
||+++|+|.||..... ....|++++.++.+|.+.|+
T Consensus 196 --aG~~~i~~~~~~~~~~----~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 196 --AGLDTCWMNPDMKPNV----PEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp --TTCEEEEECTTCCCCT----TCCCCSEEESSGGGHHHHHT
T ss_pred --CCCEEEEECCCCCCCc----ccCCCCeEECCHHHHHHHHH
Confidence 9999999999965432 34467899999999987663
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=204.70 Aligned_cols=201 Identities=16% Similarity=0.123 Sum_probs=140.7
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+|||||||+||-+.+..+.+.+++++ |++.. ... ++.+.|.+....+ ...+...
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~- 59 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQI------DIPFD--------RDM------NERLKGISREESL-ESILIFG- 59 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHH------HHHTTTCCHHHHH-HHHHHHT-
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHcCCCHHHHH-HHHHHHh-
Confidence 389999999999999999999999999988 44421 123 5557777665543 1222110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
+.. ..++.+........+.+.|.+.... .....+|||+.++|+ ++|
T Consensus 60 -----------~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g 108 (233)
T 3nas_A 60 -----------GAE------------------TKYTNAEKQELMHRKNRDYQMLISK--LTPEDLLPGIGRLLCQLKNEN 108 (233)
T ss_dssp -----------TCT------------------TTSCHHHHHHHHHHHHHHHHHHHHT--CCGGGSCTTHHHHHHHHHHTT
T ss_pred -----------CCC------------------CCCCHHHHHHHHHHHHHHHHHHHhh--cCcCCcCcCHHHHHHHHHHCC
Confidence 000 0112333333344444444433221 112348999999999 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++. ++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+++|++
T Consensus 109 ~~~~i~t~~~~--~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~---- 181 (233)
T 3nas_A 109 IKIGLASSSRN--APKILRR-LAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS---- 181 (233)
T ss_dssp CEEEECCSCTT--HHHHHHH-TTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHH----
T ss_pred CcEEEEcCchh--HHHHHHH-cCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH----
Confidence 99999999866 8889996 99999999999875 2599999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
||+.++++.+. +++. .|++++.|+.++.
T Consensus 182 aG~~~~~~~~~----~~~~----~ad~v~~s~~el~ 209 (233)
T 3nas_A 182 AGMFAVGVGQG----QPML----GADLVVRQTSDLT 209 (233)
T ss_dssp TTCEEEECC---------------CSEECSSGGGCC
T ss_pred cCCEEEEECCc----cccc----cCCEEeCChHhCC
Confidence 99999998654 3343 4679999988873
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-27 Score=200.34 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=154.0
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCch--hhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSA--LEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~--~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
.|+|+||+||||+|+-+.+..+.+.+++++ |++.. +.+ . . .+.+.+.+... . ..+..
T Consensus 5 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~~~~~----~--~------~~~~~~~~~~~-~--~~~~~ 63 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFSRNARDTFEEVYQKY------SFDRYFDSFD----H--Y------YTLYQRRNTEL-W--LEYGE 63 (240)
T ss_dssp CSEEEECCBTTTBCHHHHHHHHHHHHHHHT------TGGGTSSSHH----H--H------HHHHHHHHHHH-H--HHHHT
T ss_pred ceEEEEcCCCCCcCchhhHHHHHHHHHHHc------CCCcccCCHH----H--H------HHHHHHHHHHH-H--HHHhc
Confidence 599999999999999999999999999998 33320 000 1 1 11122211111 0 11110
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hC
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LA 157 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~ 157 (274)
. ....+.+. ......++...+++. .+....+.+.|.+. +.....+|||+.++|+ ++
T Consensus 64 ~------------~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~ 121 (240)
T 3qnm_A 64 G------------KVTKEELN---RQRFFYPLQAVGVED---EALAERFSEDFFAI----IPTKSGLMPHAKEVLEYLAP 121 (240)
T ss_dssp T------------SSCHHHHH---HHHHHHHHHHTTCCC---HHHHHHHHHHHHHH----GGGCCCBSTTHHHHHHHHTT
T ss_pred C------------CCCHHHHH---HHHHHHHHHHcCCCc---HHHHHHHHHHHHHH----hhhcCCcCccHHHHHHHHHc
Confidence 0 11111111 112233444444431 12233334444333 2334689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccC
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEP 232 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~ 232 (274)
|++++|+||.+...++..++. +|+..+|+.+++++ .||+|+.+..+++++|++|++++||||+. +|+++|++
T Consensus 122 g~~~~i~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~-- 198 (240)
T 3qnm_A 122 QYNLYILSNGFRELQSRKMRS-AGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHG-- 198 (240)
T ss_dssp TSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH--
T ss_pred CCeEEEEeCCchHHHHHHHHH-cChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHH--
Confidence 999999999999999999996 99999999999765 35999999999999999999999999995 99999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|++++++.+|... .....|++++.|+.++.+-+
T Consensus 199 --aG~~~~~~~~~~~~-----~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 199 --VGMHQAFYNVTERT-----VFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp --TTCEEEEECCSCCC-----CCSSCCSEEESSTHHHHHHT
T ss_pred --cCCeEEEEcCCCCC-----CcCCCCceEECCHHHHHHHH
Confidence 99999999999862 23457889999999997643
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=198.72 Aligned_cols=205 Identities=16% Similarity=0.119 Sum_probs=150.2
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+|+-+.+..+...+++++ |++.. .... ++.+.|......+ ...+...
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~-~~~~~~~ 67 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RRNE------LPDTLGLRIDMVV-DLWYARQ 67 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHT------TCCGG-------GGGG------SCCCTTCCHHHHH-HHHHHHS
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHc------CCCCC-------hHHH------HHHHhCCCHHHHH-HHHHHHc
Confidence 3589999999999999999999988999888 34321 0123 4556666554432 1222110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
+... ... .+....+.+.|.+.+. ....++||+.++|+ +.
T Consensus 68 ------------~~~~-------------------~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~ 109 (226)
T 1te2_A 68 ------------PWNG-------------------PSR---QEVVERVIARAISLVE----ETRPLLPGVREAVALCKEQ 109 (226)
T ss_dssp ------------CCSS-------------------SCH---HHHHHHHHHHHHHHHH----HHCCBCTTHHHHHHHHHHT
T ss_pred ------------CCCc-------------------cCH---HHHHHHHHHHHHHHHh----ccCCcCccHHHHHHHHHHC
Confidence 0000 001 1111222233322221 23578999999998 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||.+...++.+++. +|+..+|+.+++.+ .||+|+.+.++++++|++++++++|||+.+|+.+|++
T Consensus 110 g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~--- 185 (226)
T 1te2_A 110 GLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA--- 185 (226)
T ss_dssp TCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH---
T ss_pred CCcEEEEeCCcHHHHHHHHHh-cCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH---
Confidence 999999999999999999996 99999999998765 3589999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
||+.+++|.||++..+++. ..|++++.++.+|..
T Consensus 186 -aG~~~~~~~~~~~~~~~~~---~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 186 -ARMRSIVVPAPEAQNDPRF---VLANVKLSSLTELTA 219 (226)
T ss_dssp -TTCEEEECCCTTTTTCGGG---GGSSEECSCGGGCCH
T ss_pred -cCCEEEEEcCCCCcccccc---cccCeEECCHHHHhH
Confidence 9999999999987655433 346799999998854
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=201.45 Aligned_cols=120 Identities=10% Similarity=0.138 Sum_probs=105.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~---~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
.+|||+.++|+ ++|++++|+||++ ...++..++. +|+..+|+.+++++ .||+|+++..+++++|++|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-CCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 46999999999 7899999999999 9999999996 99999999998754 469999999999999999999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|++|||+. +|+++|++ ||+.++++.|| +...++. ..|++++.++.++.+.|
T Consensus 178 ~~~iGD~~~nDi~~a~~----aG~~~~~~~~~-~~~~~~~---~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARK----VGMWAVWINQE-GDKVRKL---EERGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEEESCTTTTHHHHHH----TTSEEEEECTT-CCSCEEE---ETTEEEESSGGGHHHHH
T ss_pred eEEECCChHHHHHHHHH----CCCEEEEECCC-CCCcccC---CCCcchHhhHHHHHHHH
Confidence 99999999 99999998 99999999999 4443332 23678999999987654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=205.67 Aligned_cols=222 Identities=11% Similarity=0.040 Sum_probs=152.4
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+|+-+.+..+.+.+++++ |++... ... ++.+.|..... + .+.....
T Consensus 15 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~~~~~~~-~-~~~~~~~- 72 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWRTGIATAVADYAARH------QLEVDA-------VAF------ADRWRARYQPS-M-DAILSGA- 72 (254)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHT------TCCCCH-------HHH------HHHHHTTHHHH-H-HHHHTTS-
T ss_pred ceEEEEeCCCceecCchHHHHHHHHHHHHh------cCCCCH-------HHH------HHHHHHhHHHH-H-HHHHhcC-
Confidence 489999999999999999999999999998 444321 112 23344432211 1 1221110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASS 159 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~ 159 (274)
.....+...+......+.+.++.+.+.. .....+.+.+.+ ....+|||+.++|+ ++++
T Consensus 73 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~~ 132 (254)
T 3umg_A 73 ------------REFVTLDILHRENLDFVLRESGIDPTNH---DSGELDELARAW-----HVLTPWPDSVPGLTAIKAEY 132 (254)
T ss_dssp ------------SCCCCHHHHHHHHHHHHHHHTTCCGGGS---CHHHHHHHHGGG-----GSCCBCTTHHHHHHHHHHHS
T ss_pred ------------CCCCCHHHHHHHHHHHHHHHhCCCcCcC---CHHHHHHHHHHH-----hhCcCCcCHHHHHHHHHhCC
Confidence 0000011111122233333443310000 001112222222 34689999999998 3349
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||++...++.+++. +|+. |+.+++++ .||+|+.+..+++++|++|++|+||||+.+|+++|++ |
T Consensus 133 ~~~i~t~~~~~~~~~~l~~-~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~----a 205 (254)
T 3umg_A 133 IIGPLSNGNTSLLLDMAKN-AGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHA----T 205 (254)
T ss_dssp EEEECSSSCHHHHHHHHHH-HTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH----T
T ss_pred eEEEEeCCCHHHHHHHHHh-CCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHH----C
Confidence 9999999999999999996 9986 88888754 4699999999999999999999999999999999998 9
Q ss_pred CCcEEEEe----CCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 236 GWNLYLVD----WGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 236 gv~~i~v~----wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+.+++|. ||++..+++. ....|++++.|+.+|.+.|
T Consensus 206 G~~~~~~~~~~~~g~~~~~~~~-~~~~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 206 GLATAFILRPVEHGPHQTDDLA-PTGSWDISATDITDLAAQL 246 (254)
T ss_dssp TCEEEEECCTTTTCTTCCSCSS-CSSCCSEEESSHHHHHHHH
T ss_pred CCEEEEEecCCcCCCCcccccc-ccCCCceEECCHHHHHHHh
Confidence 99999999 9998776652 2456889999999997755
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=204.17 Aligned_cols=217 Identities=12% Similarity=0.037 Sum_probs=151.6
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+|+-+.+..+.+.+++++ |++... ... .+.++|.... .+ .+.+...
T Consensus 22 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~~~~~~-~~-~~~~~~~- 79 (254)
T 3umc_A 22 MRAILFDVFGTLVDWRSSLIEQFQALEREL------GGTLPC-------VEL------TDRWRQQYKP-AM-DRVRNGQ- 79 (254)
T ss_dssp CCEEEECCBTTTEEHHHHHHHHHHHHHHHS------SSCCCH-------HHH------HHHHHHHTHH-HH-HHHHTTS-
T ss_pred CcEEEEeCCCccEecCccHHHHHHHHHHHh------cCCCCH-------HHH------HHHHHHHHHH-HH-HHHhccc-
Confidence 589999999999999999999999999998 443221 011 2223332111 11 1222110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhcc--CHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LA 157 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~ 157 (274)
.....+...+......+...++. +.+. .+.+.+. .....+|||+.++|+ ++
T Consensus 80 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~~l~~l~~ 134 (254)
T 3umc_A 80 ------------APWQHLDQLHRQSLEALAGEFGLALDEAL--------LQRITGF-----WHRLRPWPDTLAGMHALKA 134 (254)
T ss_dssp ------------SCCCCHHHHHHHHHHHHHHHTTCCCCHHH--------HHHHHGG-----GGSCEECTTHHHHHHHHTT
T ss_pred ------------CCcccHHHHHHHHHHHHHHHhCCCCCHHH--------HHHHHHH-----HhcCCCCccHHHHHHHHHh
Confidence 00000111111222333333333 2111 1222222 234689999999999 55
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
+++++|+||++...++.+++. +|+. |+.+++.+ .||||+.+..+++++|++|++|+||||+.+|+++|++
T Consensus 135 ~~~~~i~s~~~~~~~~~~l~~-~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~--- 208 (254)
T 3umc_A 135 DYWLAALSNGNTALMLDVARH-AGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARA--- 208 (254)
T ss_dssp TSEEEECCSSCHHHHHHHHHH-HTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHH---
T ss_pred cCeEEEEeCCCHHHHHHHHHH-cCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHH---
Confidence 699999999999999999996 9986 89988764 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEe----CCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVD----WGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~----wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+.+++|. ||++..+++. ....|++++.++.+|...|
T Consensus 209 -aG~~~~~~~~~~~~g~~~~~~l~-~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 209 -LGLKTAFIARPLEYGPGQSQDLA-AEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp -TTCEEEEECCTTTTCTTCCSSSS-CSSCCSEEESSHHHHHHHH
T ss_pred -CCCeEEEEecCCccCCCCCcccc-cCCCCcEEECCHHHHHHHh
Confidence 999999999 9998877661 2346789999999997765
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=205.66 Aligned_cols=124 Identities=14% Similarity=0.170 Sum_probs=104.9
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
....+|||+.++|+ ++|++++|+||++...++..++. +|+..+|+.+++. .||+|+++..+++++|++|++|+|||
T Consensus 109 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~-~kp~~~~~~~~~~~l~~~~~~~i~iG 186 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQ-SGLSDLFPRIEVV-SEKDPQTYARVLSEFDLPAERFVMIG 186 (251)
T ss_dssp CCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHH-HSGGGTCCCEEEE-SCCSHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCcHHhCceeeee-CCCCHHHHHHHHHHhCcCchhEEEEC
Confidence 45689999999999 68999999999999999999996 9999999999874 47999999999999999999999999
Q ss_pred CCh-hHHHHhhccCccCCCcEEEEeCCCCChH---H-HHhcCCCCCc-eeechhHHHhhc
Q 024003 220 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPK---E-RAEAASMPRI-QLLQLSDFCTKL 273 (274)
Q Consensus 220 Ds~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~---~-l~~a~~~P~~-~~~~~~~~~~~~ 273 (274)
|+. +|+.+|++ ||+++++|.||+.... + +. ...|++ ++.++.+|.+.|
T Consensus 187 D~~~~Di~~a~~----aG~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 187 NSLRSDVEPVLA----IGGWGIYTPYAVTWAHEQDHGVA--ADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp SCCCCCCHHHHH----TTCEEEECCCC---------------CCTTEEECSSGGGHHHHH
T ss_pred CCchhhHHHHHH----CCCEEEEECCCCccccccccccc--cCCCCeeeeCCHHHHHHHH
Confidence 999 99999998 9999999999986422 1 32 346778 899999987654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=197.23 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=145.5
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccc-cchHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVE-TGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig-~G~~~l~~~~~l~~ 79 (274)
|.|+|+||+||||+||-+.+..+.+.+++++ |++.. ... ++.+.| .+....+ +.+..
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~~--~~~~~ 60 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQF------SIPYD--------KEK------VREFIFKYSVQDLL--VRVAE 60 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHH------TCCCC--------HHH------HHHHHHHSCHHHHH--HHHHH
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHHccccHHHHH--HHhhc
Confidence 4699999999999999999999999999888 33221 123 444555 4443322 11100
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
..+++. +....+...+. +.......++||+.++|+ +
T Consensus 61 ---------------------------------~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~ 99 (207)
T 2go7_A 61 ---------------------------------DRNLDV----EVLNQVRAQSL----AEKNAQVVLMPGAREVLAWADE 99 (207)
T ss_dssp ---------------------------------HHTCCH----HHHHHHHHHHH----TTCGGGCEECTTHHHHHHHHHH
T ss_pred ---------------------------------hhhccH----HHHHHHHHHHH----HhccccceeCcCHHHHHHHHHH
Confidence 000110 11122223322 222245679999999999 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
+|++++|+||.+..... .++. +|+..+|+.+++.+ .||+|+.+..+++++|++|+++++|||+.+|+.+|++
T Consensus 100 ~g~~~~i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~-- 175 (207)
T 2go7_A 100 SGIQQFIYTHKGNNAFT-ILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQN-- 175 (207)
T ss_dssp TTCEEEEECSSCTHHHH-HHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH--
T ss_pred CCCeEEEEeCCchHHHH-HHHH-cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHH--
Confidence 89999999999999999 9996 99999999988754 3588999999999999999999999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
+|++++++.||+ . .|++++.++.+|...|+
T Consensus 176 --aG~~~i~~~~~~-~---------~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 176 --SGIQSINFLEST-Y---------EGNHRIQALADISRIFE 205 (207)
T ss_dssp --HTCEEEESSCCS-C---------TTEEECSSTTHHHHHTS
T ss_pred --CCCeEEEEecCC-C---------CCCEEeCCHHHHHHHHh
Confidence 899999999997 4 36799999999987663
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=203.33 Aligned_cols=192 Identities=13% Similarity=0.123 Sum_probs=144.1
Q ss_pred CceEEEecCcccccCHHHHHHHH-HHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCEETALSA-VKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~-n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
.|+|+|||||||+||-+.+..+. +.+++++ |.+. .. ++.+.|.+....+ ...+
T Consensus 25 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~----------~~------~~~~~g~~~~~~~-~~~~--- 78 (231)
T 3kzx_A 25 PTAVIFDWYNTLIDTSINIDRTTFYQVLDQM------GYKN----------ID------LDSIPNSTIPKYL-ITLL--- 78 (231)
T ss_dssp CSEEEECTBTTTEETTSSCCHHHHHHHHHHT------TCCC----------CC------CTTSCTTTHHHHH-HHHH---
T ss_pred CCEEEECCCCCCcCCchhHHHHHHHHHHHHc------CCCH----------HH------HHHHhCccHHHHH-HHHh---
Confidence 48999999999999999999999 9999988 3332 12 4445566554432 1111
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
+. .. ......+.+.+.. ........++||+.++|+ ++
T Consensus 79 ------------~~----------------------~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~ 118 (231)
T 3kzx_A 79 ------------GK----------------------RW---KEATILYENSLEK---SQKSDNFMLNDGAIELLDTLKEN 118 (231)
T ss_dssp ------------GG----------------------GH---HHHHHHHHHHHHH---CCSCCCCEECTTHHHHHHHHHHT
T ss_pred ------------Cc----------------------hH---HHHHHHHHHHHhh---hcccccceECcCHHHHHHHHHHC
Confidence 00 00 1111222333220 233456789999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCC-cEEEEcCChhHHHHhhccC
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL-RLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~-~~l~VGDs~~Di~aA~~~~ 232 (274)
|++++|+||.+...++..++. +|+..+|+.+++++ .||+|+.+..+++++|++|+ +++||||+.+|+++|++
T Consensus 119 g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~-- 195 (231)
T 3kzx_A 119 NITMAIVSNKNGERLRSEIHH-KNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIE-- 195 (231)
T ss_dssp TCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHH--
T ss_pred CCeEEEEECCCHHHHHHHHHH-CCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHH--
Confidence 999999999999999999996 99999999999864 35999999999999999999 99999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+.+|++.++.. ..|+.++.++.+|.+.|
T Consensus 196 --aG~~~v~~~~~~~---------~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 196 --AGCLPIKYGSTNI---------IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp --TTCEEEEECC--------------CCEEESSHHHHHHHH
T ss_pred --CCCeEEEECCCCC---------CCCceeeCCHHHHHHHH
Confidence 9999999854422 34678999999997654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=204.05 Aligned_cols=121 Identities=17% Similarity=0.155 Sum_probs=107.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...+|||+.++|+ ++ ++++|+||++...++..++. +|+..+|+.+++++ .||+|+++..+++++|++|+++
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 3689999999999 56 99999999999999999996 99999999999864 4699999999999999999999
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||||+. +|+.+|++ +|+++++|.||....+ +.. .|++++.|+.+|...|
T Consensus 176 ~~vGD~~~~Di~~a~~----aG~~~~~v~~~~~~~~-~~~---~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKN----LGMTSILLDRKGEKRE-FWD---KCDFIVSDLREVIKIV 226 (234)
T ss_dssp EEEESCTTTTHHHHHT----TTCEEEEECSSSTTGG-GGG---GCSEEESSTHHHHHHH
T ss_pred EEEcCCcHHHHHHHHH----cCCEEEEECCCCCccc-ccc---CCCEeeCCHHHHHHHH
Confidence 9999997 99999998 9999999999965543 332 5779999999997655
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=206.36 Aligned_cols=203 Identities=18% Similarity=0.147 Sum_probs=139.8
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccch-HHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGY-DTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~-~~l~~~~~l~~~ 80 (274)
.|+|+|||||||+||.+.+..+.+.+++++ |++... .....+.. ++.++|... ...+ .+....
T Consensus 11 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~~--~~~~~~~~------~~~~~g~~~~~~~~-~~~~~~- 74 (231)
T 2p11_A 11 DIVFLFDCDNTLLDNDHVLADLRAHMMREF------GAQNSA--RYWEIFET------LRTELGYADYLGAL-QRYRLE- 74 (231)
T ss_dssp SEEEEECCBTTTBCHHHHHHHHHHHHHHHH------CHHHHH--HHHHHHHH------HHHHC-CCCHHHHH-HHHHHH-
T ss_pred CeEEEEcCCCCCEecHHHHHHHHHHHHHHc------CCCcch--HHHHHHHH------HHHhcCchHHHHHH-HHHHhc-
Confidence 479999999999999999999999999998 443210 00011233 444455431 1111 011000
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
...+. ....+.+.|... ....++|||+.++|+ ++
T Consensus 75 -------------~~~~~-------------------------~~~~~~~~~~~~-----~~~~~~~~g~~~~l~~l~~~ 111 (231)
T 2p11_A 75 -------------QPRDT-------------------------RLLLMSSFLIDY-----PFASRVYPGALNALRHLGAR 111 (231)
T ss_dssp -------------CTTCT-------------------------GGGGGHHHHHHC-----CGGGGBCTTHHHHHHHHHTT
T ss_pred -------------cccch-------------------------HHHHHHHHHHHH-----HHhCCcCccHHHHHHHHHhC
Confidence 00000 001112222221 224689999999999 67
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChh---HHHHhhccCcc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA---TLKNVIKEPEL 234 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~---Di~aA~~~~~~ 234 (274)
| +++|+||++...++.+|++ +|+..+|+.+++. .++||..+..+++ +++|++|+|||||.+ |+++|++
T Consensus 112 g-~~~i~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~-~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~---- 182 (231)
T 2p11_A 112 G-PTVILSDGDVVFQPRKIAR-SGLWDEVEGRVLI-YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWG---- 182 (231)
T ss_dssp S-CEEEEEECCSSHHHHHHHH-TTHHHHTTTCEEE-ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHG----
T ss_pred C-CEEEEeCCCHHHHHHHHHH-cCcHHhcCeeEEe-cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHH----
Confidence 8 9999999999999999996 9998888876542 1367777777776 789999999999999 9999997
Q ss_pred CCCcEEEEeCCCC--ChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYN--TPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~--~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||+. ..+++...+ .|++++.++.+|.+.|
T Consensus 183 aG~~~i~v~~g~~~~~~~~l~~~~-~~~~~i~~~~el~~~l 222 (231)
T 2p11_A 183 ARLTTVFPRQGHYAFDPKEISSHP-PADVTVERIGDLVEMD 222 (231)
T ss_dssp GGEEEEEECCSSSSSCHHHHHHSC-CCSEEESSGGGGGGCG
T ss_pred cCCeEEEeCCCCCCCcchhccccC-CCceeecCHHHHHHHH
Confidence 9999999999974 555666542 2679999999987654
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=206.20 Aligned_cols=114 Identities=13% Similarity=0.127 Sum_probs=94.0
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHh--C---------CCC----CCceEe-cCCCCCcHHHHHHHHh
Q 024003 143 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA--G---------VTI----TPDRLY-GLGTGPKVNVLKQLQK 206 (274)
Q Consensus 143 ~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~--g---------l~~----~f~~v~-g~~~~pkp~~l~~~l~ 206 (274)
..++||||.++|+. |++++|+||++...++.+|++ + | +.. +|+.++ | .||+|++++.+++
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~~g--~KP~p~~~~~a~~ 198 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINTSG--KKTETQSYANILR 198 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHHHC--CTTCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeeccC--CCCCHHHHHHHHH
Confidence 46899999999999 999999999999999999995 7 5 444 444434 3 4899999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeC-CCCChHHHHhcCCCCCceeechhHH
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW-GYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~w-Gy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
++|++|++|+|||||.+|+++|++ |||++|+|+| |+.. +. ...|+.++.|+.+|
T Consensus 199 ~lg~~p~~~l~vgDs~~di~aA~~----aG~~~i~v~~~~~~~---~~--~~~~~~~i~~l~eL 253 (253)
T 2g80_A 199 DIGAKASEVLFLSDNPLELDAAAG----VGIATGLASRPGNAP---VP--DGQKYQVYKNFETL 253 (253)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHT----TTCEEEEECCTTSCC---CC--SSCCSCEESCSTTC
T ss_pred HcCCCcccEEEEcCCHHHHHHHHH----cCCEEEEEcCCCCCC---cc--cccCCCccCChhhC
Confidence 999999999999999999999998 9999999999 5432 11 11267788777653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=198.24 Aligned_cols=122 Identities=14% Similarity=0.177 Sum_probs=109.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 172 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 172 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999998 78999999999999999999996 99999999999865 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+.+|+.+|++ +|+++++|.||++..++ ....|++++.++.+|.+.|
T Consensus 173 ~iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 173 FVASNAWDATGARY----FGFPTCWINRTGNVFEE---MGQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp EEESCHHHHHHHHH----HTCCEEEECTTCCCCCS---SSCCCSEEESSHHHHHTTC
T ss_pred EEeCCHHHHHHHHH----cCCEEEEEcCCCCCccc---cCCCCCEEECCHHHHHHHH
Confidence 99999999999998 89999999999865433 2346789999999997665
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-26 Score=191.63 Aligned_cols=200 Identities=17% Similarity=0.162 Sum_probs=143.0
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+|||||||+||-+.+..+.+.+++++ |.+... ... ++.+.|......+ ...+..
T Consensus 1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~- 59 (221)
T 2wf7_A 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEI------GINGVD-------RQF------NEQLKGVSREDSL-QKILDL- 59 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHT------TCCCCS-------HHH------HTTTTTCCHHHHH-HHHHHH-
T ss_pred CCcEEEECCCCcccCChHHHHHHHHHHHHHc------CCCCCC-------HHH------HHHhCCCCHHHHH-HHHHHH-
Confidence 7799999999999999999999999999988 333110 122 4456666544332 122111
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. +. .++.+...+....+++.|.+.... .....++||+.++|+ ++
T Consensus 60 ~-----------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~ 106 (221)
T 2wf7_A 60 A-----------DK--------------------KVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSN 106 (221)
T ss_dssp T-----------TC--------------------CCCHHHHHHHHHHHHHHHHHHGGG--CCGGGBCTTHHHHHHHHHHT
T ss_pred h-----------CC--------------------CCChHHHHHHHHHHHHHHHHHHhh--ccCCCCCCCHHHHHHHHHHC
Confidence 0 00 012233333333344444332211 113578999999998 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||+ ..++.++++ +|+..+|+.+++++ .||+|+.+..+++++|++|++|+||||+.+|+++|++
T Consensus 107 g~~~~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~--- 180 (221)
T 2wf7_A 107 KIKIALASAS--KNGPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD--- 180 (221)
T ss_dssp TCEEEECCCC--TTHHHHHHH-TTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH---
T ss_pred CCeEEEEcCc--HHHHHHHHH-cChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHH---
Confidence 9999999999 456788996 99999999998765 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+.++.+ +..+++. .|++++.++.++
T Consensus 181 -aG~~~~~~----~~~~~~~----~a~~v~~~~~el 207 (221)
T 2wf7_A 181 -SGALPIGV----GRPEDLG----DDIVIVPDTSHY 207 (221)
T ss_dssp -HTCEEEEE----SCHHHHC----SSSEEESSGGGC
T ss_pred -CCCEEEEE----CCHHHhc----cccchhcCHHhC
Confidence 89998888 3455553 467999988876
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=197.26 Aligned_cols=122 Identities=11% Similarity=0.119 Sum_probs=110.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++.+ .||+|+++..+++++|++|++|+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL 176 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence 689999999999 78999999999999999999996 99999999999865 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+.+|+.+|++ +|+.+++|.||.+..+++ ...|++++.|+.+|.+.|
T Consensus 177 ~vGD~~~Di~~a~~----~G~~~~~v~~~~~~~~~~---~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 177 FVSSNGWDACGATW----HGFTTFWINRLGHPPEAL---DVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECTTCCCCCSS---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHHHHHHH----cCCEEEEEcCCCCCchhc---cCCCCEEECCHHHHHHHH
Confidence 99999999999998 999999999998776554 456889999999998765
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=204.42 Aligned_cols=122 Identities=16% Similarity=0.173 Sum_probs=107.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||.+.. +..+|+. +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~ 182 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGG-LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA 182 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHH-TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHh-CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 479999999999 789999999998875 6899996 99999999999864 46999999999999999999999
Q ss_pred EEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChH-HHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPK-ERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~-~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+. +|+++|++ +|+.+++|.||+.... ++... .|++++.|+.+|.+.|
T Consensus 183 ~vGD~~~~Di~~a~~----aG~~~i~~~~~~~~~~~~~~~~--~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 183 HVGDNYLCDYQGPRA----VGMHSFLVVGPQALDPVVRDSV--PKEHILPSLAHLLPAL 235 (263)
T ss_dssp EEESCHHHHTHHHHT----TTCEEEEECCSSCCCHHHHHHS--CGGGEESSGGGHHHHH
T ss_pred EECCCcHHHHHHHHH----CCCEEEEEcCCCCCchhhcccC--CCceEeCCHHHHHHHH
Confidence 999997 99999998 9999999999986543 44444 4669999999997655
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=205.71 Aligned_cols=121 Identities=12% Similarity=0.101 Sum_probs=104.1
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh---CCCCCCceEecCC--CCCcHHHHHHHHhhCCCCCC
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLG--TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~---gl~~~f~~v~g~~--~~pkp~~l~~~l~~l~~~~~ 213 (274)
....+|||+.++|+ ++|++++|+||++...++.+|++ + |+..+|+.|++.+ .||+|+++..+++++|++|+
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 34689999999999 68999999999999999999984 5 5999999998753 47999999999999999999
Q ss_pred cEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 214 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
+|+||||+.+|+++|++ ||+++|+|.|++....+.... .|+.++.|+.+|
T Consensus 206 ~~l~VgDs~~di~aA~~----aG~~~i~v~~~~~~~~~~~~~--~~~~~i~~l~el 255 (261)
T 1yns_A 206 NILFLTDVTREASAAEE----ADVHVAVVVRPGNAGLTDDEK--TYYSLITSFSEL 255 (261)
T ss_dssp GEEEEESCHHHHHHHHH----TTCEEEEECCTTCCCCCHHHH--HHSCEESSGGGC
T ss_pred cEEEEcCCHHHHHHHHH----CCCEEEEEeCCCCCccccccc--CCCEEECCHHHh
Confidence 99999999999999998 999999999976554322222 366899998886
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=191.14 Aligned_cols=205 Identities=16% Similarity=0.141 Sum_probs=147.2
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|+||+||||+|+-..+..+.+.+++++ |++... ... .+.+.|......+ ...+...
T Consensus 4 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~~- 62 (229)
T 2fdr_A 4 FDLIIFDCDGVLVDSEIIAAQVESRLLTEA------GYPISV-------EEM------GERFAGMTWKNIL-LQVESEA- 62 (229)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCCH-------HHH------HHHHTTCCHHHHH-HHHHHHH-
T ss_pred ccEEEEcCCCCcCccHHHHHHHHHHHHHHh------CCCCCH-------HHH------HHHHhCCCHHHHH-HHHHHHc-
Confidence 489999999999999999989999998888 333210 112 3335555444332 1111100
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHHhCCCcE
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRI 161 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~~~g~~l 161 (274)
+.. ...+. ...+.+.|.+.+ .....+|||+.++|+....++
T Consensus 63 -----------~~~--------------------~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~~ 103 (229)
T 2fdr_A 63 -----------SIP--------------------LSASL----LDKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPR 103 (229)
T ss_dssp -----------CCC--------------------CCTHH----HHHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCE
T ss_pred -----------CCC--------------------CCHHH----HHHHHHHHHHHh----hcCCccCcCHHHHHHHhCCCE
Confidence 000 01011 111222222221 123578999999999333499
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----C--CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----T--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~--~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
+|+||.+...++.++++ +|+..+| +.+++.+ . ||||+.+.++++++|++|+++++|||+.+|+.+|++
T Consensus 104 ~i~s~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~---- 178 (229)
T 2fdr_A 104 CICSNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA---- 178 (229)
T ss_dssp EEEESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----
T ss_pred EEEECCChhHHHHHHHh-CChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHH----
Confidence 99999999999999996 9999999 8888753 5 899999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCC----hHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNT----PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~----~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+.+|++.+|... .+++++.+ |++++.++.++.+.|
T Consensus 179 aG~~~i~~~~~~~~~~~~~~~l~~~~--ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 179 AGMRVIGFTGASHTYPSHADRLTDAG--AETVISRMQDLPAVI 219 (229)
T ss_dssp TTCEEEEECCSTTCCTTHHHHHHHHT--CSEEESCGGGHHHHH
T ss_pred CCCEEEEEecCCccchhhhHHHhhcC--CceeecCHHHHHHHH
Confidence 99999999999864 34566654 559999999987654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=197.17 Aligned_cols=124 Identities=13% Similarity=0.076 Sum_probs=107.2
Q ss_pred CCCCCccHHHHHH---hCCC--cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC--------CCCcHHHHHHHHhhCC
Q 024003 143 ANRLYPGVSDALK---LASS--RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------TGPKVNVLKQLQKKPE 209 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~--~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~--------~~pkp~~l~~~l~~l~ 209 (274)
...+|||+.++|+ ++|+ +++|+||.+...++.+++. +|+..+|+.+++++ .||||+.+..+++++|
T Consensus 140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred ccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 4689999999999 7899 9999999999999999996 99999999998653 2699999999999999
Q ss_pred CCC-CcEEEEcCChhHHHHhhccCccCCC-cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 210 HQG-LRLHFVEDRLATLKNVIKEPELDGW-NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 210 ~~~-~~~l~VGDs~~Di~aA~~~~~~Agv-~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++| ++|+||||+.+|+.+|++ ||+ .++++..+.... .....+.|++++.|+.+|.+.|
T Consensus 219 i~~~~~~i~vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~--~~~~~~~ad~vi~sl~el~~~l 278 (282)
T 3nuq_A 219 LARYENAYFIDDSGKNIETGIK----LGMKTCIHLVENEVNE--ILGQTPEGAIVISDILELPHVV 278 (282)
T ss_dssp CCCGGGEEEEESCHHHHHHHHH----HTCSEEEEECSCCC------CCCCTTCEEESSGGGGGGTS
T ss_pred CCCcccEEEEcCCHHHHHHHHH----CCCeEEEEEcCCcccc--ccccCCCCCEEeCCHHHHHHHh
Confidence 999 999999999999999998 899 788998887432 2223456779999999998765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-27 Score=198.11 Aligned_cols=121 Identities=19% Similarity=0.157 Sum_probs=108.4
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC--ceEecCC---CCCcHHHHHHHHhhCCCCCC
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLG---TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f--~~v~g~~---~~pkp~~l~~~l~~l~~~~~ 213 (274)
....+|||+.++|+ ++|++++|+||.+...++.+++. +|+..+| +.+++.+ .||+|+.+..+++++|++|+
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 34689999999999 78999999999999999999996 9999999 8899876 35999999999999999999
Q ss_pred cEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 214 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+||||+.+|+++|++ +|+++|+|.+|.....+ .|++++.|+.+|.+.|
T Consensus 146 ~~i~iGD~~~Di~~a~~----aG~~~i~v~~~~~~~~~------~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRA----AGTRTVLVNLPDNPWPE------LTDWHARDCAQLRDLL 195 (205)
T ss_dssp GEEEEESSHHHHHHHHH----HTCEEEECSSSSCSCGG------GCSEECSSHHHHHHHH
T ss_pred HEEEECCCHHHHHHHHH----cCCEEEEEeCCCCcccc------cCCEEeCCHHHHHHHH
Confidence 99999999999999998 99999999999854322 3779999999998765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-26 Score=195.27 Aligned_cols=121 Identities=18% Similarity=0.219 Sum_probs=108.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 182 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999998 78999999999999999999996 99999999999764 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCC-CceeechhHHHhhc
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMP-RIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P-~~~~~~~~~~~~~~ 273 (274)
||||+.+|+++|++ +|+++++|.||+. .++ ....| ++++.++.+|...|
T Consensus 183 ~iGD~~~Di~~a~~----aG~~~~~v~~~~~-~~~---~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 183 FVSSNAWDLGGAGK----FGFNTVRINRQGN-PPE---YEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECTTCC-CCC---CTTSCCSEEESSGGGHHHHH
T ss_pred EEeCCHHHHHHHHH----CCCEEEEECCCCC-CCc---ccCCCCceeeCCHHHHHHHH
Confidence 99999999999998 9999999999976 222 23457 89999999997765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-26 Score=193.60 Aligned_cols=124 Identities=13% Similarity=0.181 Sum_probs=111.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...+|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++++ .||+|+.+..+++++|++|+++
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 4689999999998 78999999999999999999996 99999999999865 3599999999999999999999
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
+||||+.+|+.+|++ +|+.+++|.||.+..+. ....|++++.|+.+|.+.|+
T Consensus 173 ~~iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 173 LFVSCNSWDATGAKY----FGYPVCWINRSNGVFDQ---LGVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp EEEESCHHHHHHHHH----HTCCEEEECTTSCCCCC---SSCCCSEEESSHHHHHHTCC
T ss_pred EEEeCCHHHHHHHHH----CCCEEEEEeCCCCcccc---ccCCCcEEeCCHHHHHHHHH
Confidence 999999999999998 99999999999765533 34568899999999987764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=199.70 Aligned_cols=120 Identities=10% Similarity=0.045 Sum_probs=103.7
Q ss_pred CCCCCCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCC---
Q 024003 142 GANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH--- 210 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~-g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~--- 210 (274)
....++||+.++|+ ++ |++++|+||++...++..++. +|+. +|+.+++++ .||+|+++..+++++|+
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 188 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPIN 188 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCC
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcc
Confidence 34679999999999 56 899999999999999999996 9987 488888754 35999999999999999
Q ss_pred ----CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 211 ----QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 211 ----~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
+|++|++|||+.+|+++|++ ||+++++|.||++ .+++... .|++++.++.+|.
T Consensus 189 ~~~~~~~~~i~~GDs~nDi~~a~~----AG~~~i~v~~~~~-~~~~~~~--~ad~v~~~~~el~ 245 (275)
T 2qlt_A 189 EQDPSKSKVVVFEDAPAGIAAGKA----AGCKIVGIATTFD-LDFLKEK--GCDIIVKNHESIR 245 (275)
T ss_dssp SSCGGGSCEEEEESSHHHHHHHHH----TTCEEEEESSSSC-HHHHTTS--SCSEEESSGGGEE
T ss_pred ccCCCcceEEEEeCCHHHHHHHHH----cCCEEEEECCCCC-HHHHhhC--CCCEEECChHHcC
Confidence 99999999999999999998 9999999999975 4455443 3569999988873
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=195.33 Aligned_cols=123 Identities=10% Similarity=0.094 Sum_probs=100.3
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHH---HhhCCCCCC
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQL---QKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~---l~~l~~~~~ 213 (274)
...+|||+.++|+ ++|++++|+||.+...++..++. +..+|+.+++++ .||+|+++..+ ++++|++|+
T Consensus 97 ~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~ 173 (240)
T 3smv_A 97 NWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173 (240)
T ss_dssp GCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred cCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence 4689999999999 45899999999999999999884 557899999864 46999998888 889999999
Q ss_pred cEEEEcCCh-hHHHHhhccCccCCCcEEEEe-----CCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 214 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVD-----WGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 214 ~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~-----wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+||||+. +|+++|++ ||+.+++|. |||+...+ ......|++++.|+.+|.+.|
T Consensus 174 ~~~~vGD~~~~Di~~a~~----aG~~~~~~~~~~~~~g~g~~~~-~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 174 DILHTAESLYHDHIPAND----AGLVSAWIYRRHGKEGYGATHV-PSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GEEEEESCTTTTHHHHHH----HTCEEEEECTTCC-------CC-CSSCCCCSEEESSHHHHHHHH
T ss_pred hEEEECCCchhhhHHHHH----cCCeEEEEcCCCcccCCCCCCC-CcCCCCCCEEeCCHHHHHHHH
Confidence 999999996 99999998 999999998 77765432 123357889999999997654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-26 Score=191.40 Aligned_cols=118 Identities=12% Similarity=0.145 Sum_probs=104.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.+ |+ ++ ++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++| |++++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 579999999 88 56 99999999999999999996 99999999999764 4699999999999999 99999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+.+|+++|++ ||+++++|.||++..+.+ ...|++++.++.++.+.|
T Consensus 148 ~vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 148 LVSSNAFDVIGAKN----AGMRSIFVNRKNTIVDPI---GGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp EEESCHHHHHHHHH----TTCEEEEECSSSCCCCTT---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHhHHHHH----CCCEEEEECCCCCCcccc---CCCCCEEECCHHHHHHHH
Confidence 99999999999998 999999999997654333 346789999999997654
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=191.85 Aligned_cols=118 Identities=12% Similarity=-0.010 Sum_probs=98.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCC-CcE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG-LRL 215 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~-~~~ 215 (274)
.++|||+.++|+ ++|++++|+||+++..+..+ .+ .+|+.|+|++ .||+|+++.++++++|+.| ++|
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~----~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 108 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL----AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGC 108 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH----HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh----cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccE
Confidence 579999999999 78999999999999887443 33 4788888865 3699999999999999975 899
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCC-----------------------hHHHHhcCCCCCceeechhHHHhh
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~-----------------------~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+|||||.+||++|++ |||++|+|.||++. .+++..+ .|++++.++.+|...
T Consensus 109 v~VGDs~~Di~aA~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~--~~d~vi~~~~eL~~~ 182 (196)
T 2oda_A 109 VLISGDPRLLQSGLN----AGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSL--GVHSVIDHLGELESC 182 (196)
T ss_dssp EEEESCHHHHHHHHH----HTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT--TCSEEESSGGGHHHH
T ss_pred EEEeCCHHHHHHHHH----CCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHc--CCCEEeCCHHHHHHH
Confidence 999999999999998 99999999999863 2233444 477999999998765
Q ss_pred c
Q 024003 273 L 273 (274)
Q Consensus 273 ~ 273 (274)
|
T Consensus 183 l 183 (196)
T 2oda_A 183 L 183 (196)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=192.27 Aligned_cols=106 Identities=12% Similarity=0.196 Sum_probs=95.6
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHH------hCCCCCCceEecCC----CCCcHHHHHHHHhhCCCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLREL------AGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~------~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~ 211 (274)
..+|||+.++|+ ++|++++|+||++...++.+++ . +|+..+|+.+++++ .||+|+++..+++++|++
T Consensus 88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~-~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 166 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMS-PRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK 166 (211)
T ss_dssp EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTS-TTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHh-hhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence 478999999999 4499999999999999999998 5 68999999998753 469999999999999999
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
|++|+||||+.+|+.+|++ +|++++++.||..-.+.+.+
T Consensus 167 ~~~~~~igD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l~~ 205 (211)
T 2i6x_A 167 PEETLFIDDGPANVATAER----LGFHTYCPDNGENWIPAITR 205 (211)
T ss_dssp GGGEEEECSCHHHHHHHHH----TTCEEECCCTTCCCHHHHHH
T ss_pred hHHeEEeCCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999998 99999999999877776654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=187.55 Aligned_cols=108 Identities=14% Similarity=0.094 Sum_probs=98.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++| +++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++++
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 469999999999 678 9999999999999999996 99999999998754 46999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCC
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAAS 257 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~ 257 (274)
||||+.+|+++|++ +|+++++|.||+...+++.+++.
T Consensus 163 ~vgD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l~~~g~ 199 (200)
T 3cnh_A 163 MVDDRLQNVQAARA----VGMHAVQCVDAAQLREELAALGV 199 (200)
T ss_dssp EEESCHHHHHHHHH----TTCEEEECSCHHHHHHHHHHTTC
T ss_pred EeCCCHHHHHHHHH----CCCEEEEECCchhhHHHHHHhcc
Confidence 99999999999998 99999999999988888877653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=194.03 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=106.9
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+|||+.++|+ + |++++|+||++...++.++++ +|+..+|+.+++.+ .||+|+++.++++++|++|++|+|
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 169 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 589999999999 6 999999999999999999996 99999999999864 369999999999999999999999
Q ss_pred EcCChhHHHHhhccCccCCCcEEEEeC------------CCCChHH--------HHhcCCCCCceeechhHHHhhc
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYLVDW------------GYNTPKE--------RAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~v~w------------Gy~~~~~--------l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||+.+|+++|++ +|++++++.| ||.++.. .......|++++.|+.++...|
T Consensus 170 vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 170 VSSNGFDVGGAKN----FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp EESCHHHHHHHHH----HTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EeCChhhHHHHHH----CCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 9999999999998 9999999999 5522221 1122356889999999987654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=185.14 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=88.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
.+|||+.++|+ ++|++++|+||++. .++..+++ +|+..+|+.+++++ .||+|+.+..+++++|++ +++|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 49999999999 78999999999985 68889996 99999999998764 359999999999999998 9999
Q ss_pred EcCChhHHHHhhccCccCCCcEEEEeCCCCChHH
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 251 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~ 251 (274)
|||+.+|+++|++ +|+.+++|.||+...+.
T Consensus 158 iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~ 187 (190)
T 2fi1_A 158 IGDRPIDIEAGQA----AGLDTHLFTSIVNLRQV 187 (190)
T ss_dssp EESSHHHHHHHHH----TTCEEEECSCHHHHHHH
T ss_pred EcCCHHHHHHHHH----cCCeEEEECCCCChhhc
Confidence 9999999999998 99999999998755443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-26 Score=195.20 Aligned_cols=114 Identities=17% Similarity=0.095 Sum_probs=91.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..++|||+.++|+ ++|++++|+||++. .++.+|++ +|+..+|+.+++++ .||+|+++..+++++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 3589999999999 67999999999987 48899996 99999999999865 3589999999999999998
Q ss_pred EEEcCChh-HHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 216 HFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 216 l~VGDs~~-Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||||+.+ |+.+|++ ||+++|+|.+| +...++ +.++.++.++...|
T Consensus 168 ~~vgD~~~~Di~~a~~----aG~~~i~v~~~-~~~~~~-------~~~i~~l~el~~~l 214 (220)
T 2zg6_A 168 VHVGDIYELDYIGAKR----SYVDPILLDRY-DFYPDV-------RDRVKNLREALQKI 214 (220)
T ss_dssp EEEESSCCCCCCCSSS----CSEEEEEBCTT-SCCTTC-------CSCBSSHHHHHHHH
T ss_pred EEEcCCchHhHHHHHH----CCCeEEEECCC-CCCCCc-------ceEECCHHHHHHHH
Confidence 99999999 9999997 99999999876 222111 46788888886554
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=182.87 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=105.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEe-----cCC----CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-----GLG----TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~-----g~~----~~p 196 (274)
.++|||+.++|+ ++|++++|+||++. ..++.+|++ +| .+|+.++ +.+ .||
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g--~~~~~~~~~~~~~~~~~~~~KP 102 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MG--GVVDAIFMCPHGPDDGCACRKP 102 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TT--CCCCEEEEECCCTTSCCSSSTT
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CC--CceeEEEEcCCCCCCCCCCCCC
Confidence 578999999999 79999999999997 778889996 88 3455544 222 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+++.++++++|++|++++||||+.+|+++|++ +|+++|+|.||++..+.+....+.|++++.++.++.+.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 103 LPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQ----AGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp SSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHH----HTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999877666543567889999999997754
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-25 Score=185.93 Aligned_cols=125 Identities=11% Similarity=0.122 Sum_probs=108.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHHhCCCCCCceEecCCC--------CCcHHHHHHHHhhCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPE 209 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---~~~~~iL~~~~gl~~~f~~v~g~~~--------~pkp~~l~~~l~~l~ 209 (274)
.++|||+.++|+ ++|++++|+||++. ..++.+|++ +|+..+|+.|++++. ||+|+++..+++++|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 111 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQ 111 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcC
Confidence 689999999999 79999999999998 899999996 999999999998642 699999999999999
Q ss_pred CCCCcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHhhc
Q 024003 210 HQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 273 (274)
Q Consensus 210 ~~~~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~~~ 273 (274)
++|++++||||+ .+|+.+|++ +|+++|+|.+|......-......|+.++. ++.+|.+.|
T Consensus 112 ~~~~~~l~VGD~~~~Di~~A~~----aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 112 IDKTEAVMVGNTFESDIIGANR----AGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp CCGGGEEEEESBTTTTHHHHHH----TTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred CCcccEEEECCCcHHHHHHHHH----CCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 999999999999 799999998 999999999998643211111237889999 999997765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=186.74 Aligned_cols=119 Identities=13% Similarity=0.248 Sum_probs=94.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC--CCceEe---------cCCC-------CCcHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLY---------GLGT-------GPKVNVL 201 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~f~~v~---------g~~~-------~pkp~~l 201 (274)
..++|||+.++|+ ++|++++|+||++...++.++++ +|+.. +|+.++ |.+. +|||+++
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 3689999999999 78999999999999999999996 99974 776553 4331 3899999
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.++++++|+ ++|+|||||.+|+.+|++ ||+ +|++ |++...+.... .|++++.++.++.+.|
T Consensus 163 ~~~~~~~~~--~~~~~vGDs~~Di~~a~~----ag~-~i~~--~~~~~~~~~~~--~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 163 KLLKEKFHF--KKIIMIGDGATDMEACPP----ADA-FIGF--GGNVIRQQVKD--NAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHCC--SCEEEEESSHHHHTTTTT----SSE-EEEE--CSSCCCHHHHH--HCSEEESCGGGGCC--
T ss_pred HHHHHHcCC--CcEEEEeCcHHhHHHHHh----CCe-EEEe--cCccccHHHHh--cCCeeecCHHHHHHHH
Confidence 999999998 789999999999999997 898 6554 55433333222 4679999999987665
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-25 Score=185.01 Aligned_cols=106 Identities=14% Similarity=0.168 Sum_probs=92.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||++...++.++++.+|+..+|+.+++++ .||+|+++..+++++|++|++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 478999999999 68999999999999887777762267778899998754 46999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHH
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 253 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~ 253 (274)
||||+.+|+.+|++ +|++++++.||....+.+.
T Consensus 170 ~vgD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l~ 202 (206)
T 2b0c_A 170 FFDDNADNIEGANQ----LGITSILVKDKTTIPDYFA 202 (206)
T ss_dssp EEESCHHHHHHHHT----TTCEEEECCSTTHHHHHHH
T ss_pred EeCCCHHHHHHHHH----cCCeEEEecCCchHHHHHH
Confidence 99999999999998 9999999999976555554
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=180.99 Aligned_cols=104 Identities=13% Similarity=0.076 Sum_probs=91.0
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHH------HHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLL------RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL------~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~ 211 (274)
..++||+.++|+ ++.++++|+||.+...++.++ +. +|+..+|+.+++++ .||+|+++..+++++|++
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 111 VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 358899999999 333999999999999998666 64 78888999998754 469999999999999999
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHH
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 252 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l 252 (274)
|++|+||||+.+|+++|++ ||+.+|+|.+|....+.|
T Consensus 190 ~~~~~~vGD~~~Di~~a~~----aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 190 PKETFFIDDSEINCKVAQE----LGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp GGGEEEECSCHHHHHHHHH----TTCEEECCCTTCCGGGGG
T ss_pred HHHeEEECCCHHHHHHHHH----cCCEEEEECCHHHHHHHh
Confidence 9999999999999999998 999999999997655544
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-23 Score=175.99 Aligned_cols=118 Identities=11% Similarity=0.110 Sum_probs=96.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEec-CCC------CCcHHHHHHHHhhCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYG-LGT------GPKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g-~~~------~pkp~~l~~~l~~l~~~ 211 (274)
..++|||+.++|+ ++ ++++|+||++...++.++++ +|+..+| +.++. .+. +|+|++...++++++..
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 4689999999999 56 99999999999999999996 9999999 45554 332 39999999999999999
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCce-eechhHHHhhc
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ-LLQLSDFCTKL 273 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~-~~~~~~~~~~~ 273 (274)
|++|+||||+.+|+.+|++ ||++++ | +..+++.... |.++ +.++.++...|
T Consensus 145 ~~~~~~iGD~~~Di~~a~~----aG~~~~---~--~~~~~~~~~~--~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTMLSE----AHAGIL---F--HAPENVIREF--PQFPAVHTYEDLKREF 196 (206)
T ss_dssp TCEEEEEECSSTTHHHHHH----SSEEEE---E--SCCHHHHHHC--TTSCEECSHHHHHHHH
T ss_pred CCEEEEEeCChhhHHHHHh----cCccEE---E--CCcHHHHHHH--hhhccccchHHHHHHH
Confidence 9999999999999999998 898754 3 3445565543 4575 88998886654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-25 Score=187.99 Aligned_cols=122 Identities=13% Similarity=0.120 Sum_probs=99.7
Q ss_pred CCCCCccHHHHHH---hCCCcEE---------------------------------EEcCCchHHHHHHHHHHhC-CCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIY---------------------------------IVTSNQSRFVETLLRELAG-VTIT 185 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~la---------------------------------IvTnK~~~~~~~iL~~~~g-l~~~ 185 (274)
...++||+.++|+ +.|++++ |+||++ .....+++. +| +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~-~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPA-CGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBC-HHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeec-chHHHHH
Confidence 4578999999998 7899999 999987 444444443 44 4445
Q ss_pred CceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCC
Q 024003 186 PDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 260 (274)
Q Consensus 186 f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~ 260 (274)
|+.+.+.+ .+|||..+..+++++|++|++|++|||+ .+|+++|++ ||+.+++|.||++..+++......|+
T Consensus 163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~----aG~~~~~v~~g~~~~~~~~~~~~~~~ 238 (250)
T 2c4n_A 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSSLDDIDSMPFRPS 238 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH----TTCEEEEESSSSCCGGGGSSCSSCCS
T ss_pred HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHH----cCCeEEEECCCCCChhhhhhcCCCCC
Confidence 66665554 3599999999999999999999999999 799999998 99999999999988777765446788
Q ss_pred ceeechhHHH
Q 024003 261 IQLLQLSDFC 270 (274)
Q Consensus 261 ~~~~~~~~~~ 270 (274)
+++.++.+|.
T Consensus 239 ~v~~~~~el~ 248 (250)
T 2c4n_A 239 WIYPSVAEID 248 (250)
T ss_dssp EEESSGGGCC
T ss_pred EEECCHHHhh
Confidence 9999998874
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=174.79 Aligned_cols=120 Identities=19% Similarity=0.215 Sum_probs=102.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHHhCCCCCCceEe-cC------------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLY-GL------------ 192 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~---------------~~~~~~iL~~~~gl~~~f~~v~-g~------------ 192 (274)
.++|||+.++|+ ++|++++|+||++ ...++.+|++ +|+. |+.++ +.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--f~~~~~~~~~~~~~~~~~~~ 125 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD--LDGIYYCPHHPQGSVEEFRQ 125 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCBTTCSSGGGBS
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCc--eEEEEECCcCCCCcccccCc
Confidence 478999999999 7899999999999 5888999996 9997 66654 21
Q ss_pred C---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 193 G---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 193 ~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
+ .||+|+++..++++++++|++++||||+.+|+++|++ ||+++ |+|.||+...+.. .. .|++++.++.+
T Consensus 126 ~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~----aG~~~~i~v~~g~~~~~~~-~~--~~d~vi~~l~e 198 (211)
T 2gmw_A 126 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA----ANVGTKVLVRTGKPITPEA-EN--AADWVLNSLAD 198 (211)
T ss_dssp CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH----TTCSEEEEESSSSCCCHHH-HH--HCSEEESCGGG
T ss_pred cCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----CCCceEEEEecCCCccccc-cC--CCCEEeCCHHH
Confidence 1 3699999999999999999999999999999999998 99999 9999999765433 22 47799999999
Q ss_pred HHhhc
Q 024003 269 FCTKL 273 (274)
Q Consensus 269 ~~~~~ 273 (274)
|.+.|
T Consensus 199 l~~~l 203 (211)
T 2gmw_A 199 LPQAI 203 (211)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-23 Score=172.98 Aligned_cols=101 Identities=21% Similarity=0.154 Sum_probs=92.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~-~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
..+++||+.++|+ ++|++++|+||++ ...++.+++. +|+..+|+.+++.. +|||+.+..+++++|++|++|+||
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~~i 143 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREIYP-GSKITHFERLQQKTGIPFSQMIFF 143 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEESS-SCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEEEe-CchHHHHHHHHHHcCCChHHEEEE
Confidence 4579999999999 7899999999999 7999999996 99999999875533 589999999999999999999999
Q ss_pred cCChhHHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 219 EDRLATLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 219 GDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
||+.+|+++|++ +|+++|+|.|||+..
T Consensus 144 gD~~~Di~~a~~----aG~~~i~v~~g~~~~ 170 (187)
T 2wm8_A 144 DDERRNIVDVSK----LGVTCIHIQNGMNLQ 170 (187)
T ss_dssp ESCHHHHHHHHT----TTCEEEECSSSCCHH
T ss_pred eCCccChHHHHH----cCCEEEEECCCCChH
Confidence 999999999998 899999999999754
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-24 Score=184.45 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=90.4
Q ss_pred CCCCCCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 142 GANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~-g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
...++|||+.++|+ ++ |++++|+||++...++.+|++ +|+ |+.++|++ +++++|++|++|+|
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl---f~~i~~~~----------~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW---VEQHLGPQ----------FVERIILTRDKTVV 135 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH---HHHHHCHH----------HHTTEEECSCGGGB
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc---hhhhcCHH----------HHHHcCCCcccEEE
Confidence 35689999999999 56 999999999999999999996 998 88888742 78899999999999
Q ss_pred EcCChhH----HHHhh-ccCccCCCcEEEEeCCCCChHHHHhcCCCCCc-eeech-hHHHhhc
Q 024003 218 VEDRLAT----LKNVI-KEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQL-SDFCTKL 273 (274)
Q Consensus 218 VGDs~~D----i~aA~-~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~-~~~~~-~~~~~~~ 273 (274)
||||.+| +.+|+ + +|+++|++.++++.... ..|.+ .+.++ +.+.+.|
T Consensus 136 vgDs~~dD~~~i~~A~~~----aG~~~i~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQEET----PSWEHILFTCCHNRHLV-----LPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp CCSEEEESSSCCCSSCSS----CSSEEEEECCGGGTTCC-----CCTTSCEECSTTSCHHHHH
T ss_pred ECCchhhCcHHHhhcccc----cccceEEEEeccCcccc-----cccchHHHhhHHHHHHHHh
Confidence 9999999 99998 6 99999999999865422 23455 58888 5555443
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-24 Score=182.06 Aligned_cols=106 Identities=15% Similarity=0.106 Sum_probs=88.8
Q ss_pred CCCCCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 143 ANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~-g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..++|||+.++|+ ++ |++++|+||++...++..+++ +|+.. ||+ ..++++++++|++|+|
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~f~--------------~~~~~~l~~~~~~~~~ 137 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWVEKYFG--------------PDFLEQIVLTRDKTVV 137 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHHHHHHC--------------GGGGGGEEECSCSTTS
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchHHHhch--------------HHHHHHhccCCccEEE
Confidence 4689999999999 67 999999999999999999996 89887 886 5678899999999999
Q ss_pred EcCChhH----HHHhh-ccCccCCCcEEEEeCCCCChHHHHhcCCCCCc-eeech-hHHHhh
Q 024003 218 VEDRLAT----LKNVI-KEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQL-SDFCTK 272 (274)
Q Consensus 218 VGDs~~D----i~aA~-~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~-~~~~~-~~~~~~ 272 (274)
|||+.+| +++|+ + ||+++|++.|+++... ...|.+ .+.++ +++...
T Consensus 138 vgDs~~dD~~~~~~a~~~----aG~~~i~~~~~~~~~~-----~~~~~~~~v~~~~~~l~~~ 190 (197)
T 1q92_A 138 SADLLIDDRPDITGAEPT----PSWEHVLFTACHNQHL-----QLQPPRRRLHSWADDWKAI 190 (197)
T ss_dssp CCSEEEESCSCCCCSCSS----CSSEEEEECCTTTTTC-----CCCTTCEEECCTTSCHHHH
T ss_pred ECcccccCCchhhhcccC----CCceEEEecCcccccc-----cccccchhhhhHHHHHHHH
Confidence 9999999 99998 7 9999999999997642 123445 57787 465543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-22 Score=168.48 Aligned_cols=114 Identities=10% Similarity=0.014 Sum_probs=94.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC-----------C---CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------G---TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~-----------~---~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||.+...++.+++. +|+..+|+.+++. + .+|||+.+..+++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 679999999999 78999999999999999999996 9999999988521 1 3599999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
++|++|++++||||+.+|+.+|++ ||++++ | +..+++++ .+++++.+. +|..
T Consensus 153 ~~g~~~~~~i~vGDs~~Di~~a~~----aG~~~~---~--~~~~~l~~---~ad~v~~~~-dl~~ 204 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGANDLSMFKH----AHIKIA---F--NAKEVLKQ---HATHCINEP-DLAL 204 (217)
T ss_dssp HHTCCSTTEEEEECSGGGHHHHTT----CSEEEE---E--SCCHHHHT---TCSEEECSS-BGGG
T ss_pred HcCCCHhHEEEEeCCHHHHHHHHH----CCCeEE---E--CccHHHHH---hcceeeccc-CHHH
Confidence 999999999999999999999998 887653 3 45556653 356887654 4443
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-23 Score=194.53 Aligned_cols=106 Identities=18% Similarity=0.102 Sum_probs=90.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC------chHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSN------QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK------~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~ 210 (274)
..+|||+.++|+ ++|++++|+||. ........+. |+..+|+.|++++ .||+|++++.+++++|+
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~ 175 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC---ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH---HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh---hhhhheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 589999999998 799999999998 3333333332 6778999999864 47999999999999999
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcC
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 256 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~ 256 (274)
+|++|+||||+.+|+++|++ ||+++|++.+|+...+.+..+.
T Consensus 176 ~p~~~~~v~D~~~di~~a~~----aG~~~~~~~~~~~~~~~l~~~~ 217 (555)
T 3i28_A 176 SPSEVVFLDDIGANLKPARD----LGMVTILVQDTDTALKELEKVT 217 (555)
T ss_dssp CGGGEEEEESCHHHHHHHHH----HTCEEEECSSHHHHHHHHHHHH
T ss_pred ChhHEEEECCcHHHHHHHHH----cCCEEEEECCCccHHHHHHhhh
Confidence 99999999999999999998 9999999999987777776653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-23 Score=184.66 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=91.9
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
...++|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++. +| ..++++++.. ++|+||
T Consensus 160 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~---~K----~~~~~~l~~~-~~~~~v 230 (287)
T 3a1c_A 160 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEVLPH---QK----SEEVKKLQAK-EVVAFV 230 (287)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCTT---CH----HHHHHHHTTT-CCEEEE
T ss_pred eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeeecChH---HH----HHHHHHHhcC-CeEEEE
Confidence 35689999999999 78999999999999999999996 9999888877632 34 5677888888 999999
Q ss_pred cCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHhhc
Q 024003 219 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 273 (274)
Q Consensus 219 GDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~~~ 273 (274)
||+.+|+.+|++ ||+. |.||++... ....|++++ .++.++.+.|
T Consensus 231 GDs~~Di~~a~~----ag~~---v~~~~~~~~----~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 231 GDGINDAPALAQ----ADLG---IAVGSGSDV----AVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp ECTTTCHHHHHH----SSEE---EEECCCSCC----SSCCSSEEESSSCTHHHHHHH
T ss_pred ECCHHHHHHHHH----CCee---EEeCCCCHH----HHhhCCEEEeCCCHHHHHHHH
Confidence 999999999998 8874 667765432 234578999 8898886654
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=161.98 Aligned_cols=103 Identities=15% Similarity=0.060 Sum_probs=80.0
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCC---chH--HHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCc
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSN---QSR--FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK---~~~--~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++|||+.++|+ +++++++|+||+ ++. .+...|+++|++..+|+.|++++.. .+ ++
T Consensus 66 ~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-----------~l----~~ 130 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-----------II----LA 130 (180)
T ss_dssp GSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-----------GB----CC
T ss_pred ccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-----------ee----cc
Confidence 35789999999999 556999999999 533 3355676557887888999987631 12 67
Q ss_pred EEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 215 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+|||||.+++. ++ || ++|+|.|||+.. ..|..++.++.++.+.|
T Consensus 131 ~l~ieDs~~~i~--~a----aG-~~i~~~~~~~~~-------~~~~~~i~~~~el~~~l 175 (180)
T 3bwv_A 131 DYLIDDNPKQLE--IF----EG-KSIMFTASHNVY-------EHRFERVSGWRDVKNYF 175 (180)
T ss_dssp SEEEESCHHHHH--HC----SS-EEEEECCGGGTT-------CCSSEEECSHHHHHHHH
T ss_pred cEEecCCcchHH--Hh----CC-CeEEeCCCcccC-------CCCceecCCHHHHHHHH
Confidence 899999999995 33 79 999999998632 35779999999987654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-22 Score=173.68 Aligned_cols=117 Identities=11% Similarity=0.165 Sum_probs=94.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC------------CCCcHHHHH------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------TGPKVNVLK------ 202 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~------------~~pkp~~l~------ 202 (274)
.++|||+.++|+ ++|++++|+||++...++.+++ |+..+ +.|++.+ .||+|.++.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence 689999999999 7899999999999999999987 56555 7788753 346666433
Q ss_pred --HHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 203 --QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 203 --~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.++++++++|++++||||+.+|+.+|++ ||++++ .||+ .+++...+ .|++++.++.++.+.|
T Consensus 152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~----aG~~~~--~~~~--~~~~~~~~-~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKL----SDLCFA--RDYL--LNECREQN-LNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHT----CSEEEE--CHHH--HHHHHHTT-CCEECCSSHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEEeCChHHHHHHHh----CCeeee--chHH--HHHHHHCC-CCeeecCCHHHHHHHH
Confidence 8899999999999999999999999998 899885 4765 34455442 2679999999987654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-22 Score=168.44 Aligned_cols=122 Identities=8% Similarity=0.132 Sum_probs=95.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC--CCCc--eEecCC--------CCCcHHHHHH-HHhh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPD--RLYGLG--------TGPKVNVLKQ-LQKK 207 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~--~~f~--~v~g~~--------~~pkp~~l~~-~l~~ 207 (274)
..++||+.++|+ ++|++++|+||++...++.++++ +|+. .+|. .+++.+ .+|+|....+ +.+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 459999999999 79999999999999999999996 9994 3444 333332 2355554444 4455
Q ss_pred CCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 208 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 208 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|++|++++||||+.+|+.+++ +|+.+++|.||.+...+.... .|++++.|+.++.+.|
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~~-----~G~~~~~v~~~~~~~~~~~~~--~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLYE-----KGYATKFIAYMEHIEREKVIN--LSKYVARNVAELASLI 218 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHHH-----HTSCSEEEEECSSCCCHHHHH--HCSEEESSHHHHHHHH
T ss_pred hCCCCCCEEEEECCHhHHHHHh-----CCCCcEEEeccCccccHHHHh--hcceeeCCHHHHHHhh
Confidence 6999999999999999999985 799999999998775544333 3669999999998754
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-23 Score=184.78 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=101.1
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCCchHH--HHH-HHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCC
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSNQSRF--VET-LLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK~~~~--~~~-iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~ 212 (274)
....+|||+.++|+ ++|+++ |+||++... ... +++. .++..+|+.+++.+ .||+|+++..+++++|++|
T Consensus 123 ~~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGA-GSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp CTTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECH-HHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCG
T ss_pred CCCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCC-cHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCH
Confidence 34679999999999 789998 999998743 222 2232 34555678887765 3799999999999999999
Q ss_pred CcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 213 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 213 ~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
++++||||+ .+|+.+|++ +|+++|+|.||++..+++.+.+..|++++.++.++.
T Consensus 201 ~~~~~vGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQ----NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp GGEEEEESCTTTHHHHHHH----HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHEEEECCCcHHHHHHHHH----cCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 999999999 599999998 899999999999887777666557999999998874
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-23 Score=178.59 Aligned_cols=123 Identities=10% Similarity=0.058 Sum_probs=102.1
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc---eEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 145 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 145 ~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~---~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
.+|||+.++|+ .+|+++ |+||++.......+.. +|+..+|+ .+++.+ .||+|+++..+++++|++|++|
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 199 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLA-LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA 199 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEE-ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcc-cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence 48999999998 689999 9999988776666664 78877776 455654 4699999999999999999999
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||||+. +|+.+|++ ||+++|+|.||.....+.......|++++.++.++.+.|
T Consensus 200 ~~iGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 200 VMIGDDCRDDVDGAQN----IGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp EEEESCTTTTHHHHHH----TTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred EEECCCcHHHHHHHHH----CCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 9999998 99999998 999999999996544443333467889999999987654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=157.98 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=95.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec-CC-------------CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-LG-------------TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g-~~-------------~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||++...++..++. +|+..+|+.++. .+ ..+||+.+.++++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 578999999998 79999999999999999999996 999876654331 11 1378999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHHhhcC
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCTKLK 274 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~~~~~ 274 (274)
++|++|++|+||||+.+|+.+|++ ||+.+ .++ ..+++.. .+++++.+ +.++...|+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~----ag~~~---~~~--~~~~~~~---~a~~v~~~~~~~~l~~~l~ 211 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKK----AGLKI---AFC--AKPILKE---KADICIEKRDLREILKYIK 211 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----CSEEE---EES--CCHHHHT---TCSEEECSSCGGGGGGGCC
T ss_pred HcCCCHHHEEEEecChhHHHHHHH----CCCEE---EEC--CCHHHHh---hcceeecchhHHHHHHhhC
Confidence 999999999999999999999998 88752 244 3344532 36699988 999877664
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-22 Score=178.47 Aligned_cols=126 Identities=17% Similarity=0.167 Sum_probs=102.2
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHH---HHHHHhCCCCCCceEecCCC-----CCcHHHHHHHHhhCCCCC
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGLGT-----GPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~---iL~~~~gl~~~f~~v~g~~~-----~pkp~~l~~~l~~l~~~~ 212 (274)
...+|||+.++|+ .+|+++ |+||++...... +++. .++..+|+.+++.+. ||||..+..+++++|++|
T Consensus 135 ~~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~ 212 (271)
T 1vjr_A 135 KTLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDA-GSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPK 212 (271)
T ss_dssp TTCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECH-HHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCG
T ss_pred CCcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccc-cHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCC
Confidence 3568999999988 789998 999987543221 2222 334445565655443 699999999999999999
Q ss_pred CcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 213 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 213 ~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
++++||||+ .+|+++|++ ||+.+++|.||++..+++......|++++.++.++...||
T Consensus 213 ~e~i~iGD~~~nDi~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 213 ERMAMVGDRLYTDVKLGKN----AGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp GGEEEEESCHHHHHHHHHH----HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred ceEEEECCCcHHHHHHHHH----cCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 999999999 599999998 9999999999999888888766789999999999988775
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.8e-22 Score=155.52 Aligned_cols=103 Identities=11% Similarity=0.056 Sum_probs=89.1
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++.+++++++++|++++|||
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg 98 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVD 98 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence 355555555 68999999999999999999996 99999999999753 57999999999999999999999999
Q ss_pred CChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 220 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
|+.+|+++|++ +|+.+++|.||....+.+.+
T Consensus 99 D~~~di~~a~~----~G~~~i~~~~~~~~~~~l~~ 129 (137)
T 2pr7_A 99 DSILNVRGAVE----AGLVGVYYQQFDRAVVEIVG 129 (137)
T ss_dssp SCHHHHHHHHH----HTCEEEECSCHHHHHHHHHH
T ss_pred CCHHHHHHHHH----CCCEEEEeCChHHHHHHHHH
Confidence 99999999998 89999999998765555543
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-21 Score=171.69 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=87.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
.+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++.+ |...+....+.+ +++||||+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~~~~---k~~~~k~~~~~~-----~~~~vGD~ 214 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFAEVLPHE---KAEKVKEVQQKY-----VTAMVGDG 214 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCGGG---HHHHHHHHHTTS-----CEEEEECT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhHhcCHHH---HHHHHHHHHhcC-----CEEEEeCC
Confidence 79999999998 78999999999999999999996 99999999888764 444444444433 78999999
Q ss_pred hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 222 LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 222 ~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.+|+.++++ || ++|.||+++...... +++.....++.++...|
T Consensus 215 ~nDi~~~~~----Ag---~~va~~~~~~~~~~~--a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 215 VNDAPALAQ----AD---VGIAIGAGTDVAVET--ADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp TTTHHHHHH----SS---EEEECSCCSSSCCCS--SSEECSSCCTHHHHHHH
T ss_pred chhHHHHHh----CC---ceEEecCCcHHHHhh--CCEEEeCCCHHHHHHHH
Confidence 999999998 88 589999876544332 34334447787776543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-21 Score=165.53 Aligned_cols=120 Identities=25% Similarity=0.235 Sum_probs=101.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEe-cC-----------C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-GL-----------G 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~-g~-----------~ 193 (274)
.++|||+.++|+ ++|++++|+||++. ..++.+|++ +|+. |+.++ +. +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--~~~~~~~~~~~~g~~~~~~~ 131 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVF--VDMVLACAYHEAGVGPLAIP 131 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCCTTCCSTTCCS
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCc--eeeEEEeecCCCCceeeccc
Confidence 478999999999 78999999999998 789999996 9985 55432 32 2
Q ss_pred ----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 194 ----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 194 ----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
.||+|+++..++++++++|++++||||+.+|+++|++ +|+++ ++|.||+...+. ....|++++.++.+
T Consensus 132 ~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~----aG~~~~i~v~~g~~~~~~---~~~~~~~~i~~l~e 204 (218)
T 2o2x_A 132 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR----AGLAQGWLVDGEAAVQPG---FAIRPLRDSSELGD 204 (218)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH----TTCSEEEEETCCCEEETT---EEEEEESSHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH----CCCCEeEEEecCCCCccc---ccCCCCEecccHHH
Confidence 3699999999999999999999999999999999998 99999 999999976543 22357799999998
Q ss_pred HHhhc
Q 024003 269 FCTKL 273 (274)
Q Consensus 269 ~~~~~ 273 (274)
|...|
T Consensus 205 l~~~l 209 (218)
T 2o2x_A 205 LLAAI 209 (218)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-21 Score=168.88 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=78.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe-cC------CCCCcHHHHHHHHhhCCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GL------GTGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~-g~------~~~pkp~~l~~~l~~l~~~~~ 213 (274)
..++||+.++|+ ++|++++|+||++...++.+++. +..+|+.++ |. ..||+|+++.++++++|+
T Consensus 87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~---l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--- 160 (211)
T 2b82_A 87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT---LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--- 160 (211)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH---HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE---
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC---
Confidence 357899999998 78999999999987766666663 334555542 21 246999999999999998
Q ss_pred cEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 214 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
|+||||+.+|+++|++ ||+++|+|.||+++.
T Consensus 161 -~l~VGDs~~Di~aA~~----aG~~~i~v~~g~~~~ 191 (211)
T 2b82_A 161 -RIFYGDSDNDITAARD----VGARGIRILRASNST 191 (211)
T ss_dssp -EEEEESSHHHHHHHHH----TTCEEEECCCCTTCS
T ss_pred -EEEEECCHHHHHHHHH----CCCeEEEEecCCCCc
Confidence 9999999999999998 999999999999765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=171.77 Aligned_cols=119 Identities=14% Similarity=0.133 Sum_probs=95.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC-----------C---CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------G---TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~-----------~---~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++. + .||||+++.++++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 579999999999 79999999999999999999996 9999999876531 1 1499999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++|++|++++||||+.+|+.+|++ ||+ +|.|+ ..+..... ++..+...++.++...|
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~----AG~---~va~~-~~~~~~~~--a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEH----AGT---GIAWK-AKPVVREK--IHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSE---EEEES-CCHHHHHH--CCEEESSSCGGGGGGGT
T ss_pred HcCCCcceEEEEeCCHHHHHHHHH----CCC---eEEeC-CCHHHHHh--cCeeeCCCCHHHHHHHH
Confidence 999999999999999999999998 885 55565 33332333 34335555777766554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-20 Score=175.24 Aligned_cols=125 Identities=15% Similarity=-0.001 Sum_probs=110.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEecCC---------------CCCcHHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLG---------------TGPKVNVLK 202 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~g~~---------------~~pkp~~l~ 202 (274)
..++|||+.++|+ ++|++++|+||++...++.+|++ +|+..+|+ .|++++ .||+|+++.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 3589999999999 78999999999999999999996 99999999 788743 469999999
Q ss_pred HHHhhCC--------------CCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC---hHHHHhcCCCCCceeec
Q 024003 203 QLQKKPE--------------HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT---PKERAEAASMPRIQLLQ 265 (274)
Q Consensus 203 ~~l~~l~--------------~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~---~~~l~~a~~~P~~~~~~ 265 (274)
.+++++| ++|++|+|||||.+|+++|++ |||++|+|.||++. .+++...+ |++++.+
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~----AG~~~I~V~~g~~~~~~~~~l~~~~--ad~vi~s 365 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK----IGATFIGTLTGLKGKDAAGELEAHH--ADYVINH 365 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH----HTCEEEEESCBTTBGGGHHHHHHTT--CSEEESS
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHH----cCCEEEEECCCccccccHHHHhhcC--CCEEECC
Confidence 9999999 899999999999999999998 99999999999963 45565444 6699999
Q ss_pred hhHHHhhcC
Q 024003 266 LSDFCTKLK 274 (274)
Q Consensus 266 ~~~~~~~~~ 274 (274)
+.+|...|+
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 999987653
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=153.90 Aligned_cols=92 Identities=16% Similarity=0.036 Sum_probs=78.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe--------c----CCC--CCcHHHHHHHHhh
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G----LGT--GPKVNVLKQLQKK 207 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~--------g----~~~--~pkp~~l~~~l~~ 207 (274)
.+|||+.++|+ ++|++++|+||++...++.++++ +|++.+|...+ | ... ++|++.+..++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 68999999998 79999999999999999999996 99976554322 1 111 2788899999999
Q ss_pred CC---CCCCcEEEEcCChhHHHHhhccCccCCCcEEE
Q 024003 208 PE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 208 l~---~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~ 241 (274)
+| ++|++|+|||||.+|+.++++ ||++++.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~----ag~~~~~ 203 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEA----VTRPIAA 203 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHH----SSEEEEE
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHh----CCCeEEE
Confidence 99 999999999999999999998 8877653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-21 Score=174.37 Aligned_cols=116 Identities=14% Similarity=0.164 Sum_probs=95.9
Q ss_pred ccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 139 TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 139 ~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
......++|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.++ |+....++++++..|++|
T Consensus 130 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~-------p~~k~~~~~~l~~~~~~~ 201 (263)
T 2yj3_A 130 SFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNLS-------PEDKVRIIEKLKQNGNKV 201 (263)
Confidence 33445689999999999 68999999999999999999996 99999998876 445567888999999999
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHhhc
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 273 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~~~ 273 (274)
+||||+.+|+.++++ || ++|.||+++.. . ...|++++ .++.++...|
T Consensus 202 ~~VGD~~~D~~aa~~----Ag---v~va~g~~~~~--~--~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 202 LMIGDGVNDAAALAL----AD---VSVAMGNGVDI--S--KNVADIILVSNDIGTLLGLI 250 (263)
Confidence 999999999999997 77 57999976432 2 23467888 8888876544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-20 Score=162.53 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=85.7
Q ss_pred CCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHHhCCCCCCc---eEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 146 LYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 146 lypGv~e~L~---~~-g~~laIvTnK~~~~~~~iL~~~~gl~~~f~---~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
.||++.+.++ ++ |+++ ++||.+.......+.. .++..+|+ .+.+.+ .||||+.+..+++++|++|++
T Consensus 132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~ 209 (271)
T 2x4d_A 132 SYQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLM-LDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ 209 (271)
T ss_dssp CHHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEE-ECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred CHHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcc-cChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcce
Confidence 4677777776 44 7877 7777654332222111 22222222 122222 369999999999999999999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+++|||+. +|+.+|++ ||+.+++|.||.....+.......|++++.++.++...|
T Consensus 210 ~i~iGD~~~nDi~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 210 AVMIGDDIVGDVGGAQR----CGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp EEEEESCTTTTHHHHHH----TTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHH----CCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 99999998 99999998 999999999995444433332456889999999987654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-20 Score=151.92 Aligned_cols=112 Identities=12% Similarity=0.136 Sum_probs=87.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-----CCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----GPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-----~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++||+.++|+ ++|++++|+||++...++.+ +. +|+..+|+.+...+. +|.|..-..+++++ +|++
T Consensus 77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~ 152 (201)
T 4ap9_A 77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF 152 (201)
T ss_dssp GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence 3589999999999 78999999999999999999 85 999877666654331 24444455667766 8999
Q ss_pred EEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 215 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++||||+.+|+.+|++ ||++ +++ |.+.. .+++++.|+.++.+.|
T Consensus 153 ~i~iGD~~~Di~~~~~----ag~~-v~~--~~~~~--------~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 153 ILAMGDGYADAKMFER----ADMG-IAV--GREIP--------GADLLVKDLKELVDFI 196 (201)
T ss_dssp EEEEECTTCCHHHHHH----CSEE-EEE--SSCCT--------TCSEEESSHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHh----CCce-EEE--CCCCc--------cccEEEccHHHHHHHH
Confidence 9999999999999998 8985 444 43332 4679999999987654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-20 Score=162.19 Aligned_cols=125 Identities=14% Similarity=0.138 Sum_probs=89.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHH---HHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~---~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~ 213 (274)
....|+++.+.+. ..+. ..++||+...... .+... .++..+|+.+++.+ .||||..+..+++++|++++
T Consensus 124 ~~~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 201 (266)
T 3pdw_A 124 RSITYEKFAVGCLAIRNGA-RFISTNGDIAIPTERGLLPGN-GSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVS 201 (266)
T ss_dssp TTCCHHHHHHHHHHHHTTC-EEEESCCCCEEEETTEEEECH-HHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGG
T ss_pred CCCCHHHHHHHHHHHHCCC-eEEEEcCCceeECCCceEecc-hHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChh
Confidence 3467899988887 5555 6788987653210 00000 11222344444443 36999999999999999999
Q ss_pred cEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 214 RLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 214 ~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+++||||+ .+|+.+|++ ||+.+++|.||++..+++++.+..|++++.|+.+|.+|.
T Consensus 202 ~~~~iGD~~~~Di~~~~~----aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~ 258 (266)
T 3pdw_A 202 ETLMVGDNYATDIMAGIN----AGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYI 258 (266)
T ss_dssp GEEEEESCTTTHHHHHHH----HTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHH
T ss_pred hEEEECCCcHHHHHHHHH----CCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHh
Confidence 99999999 799999998 999999999999988888776667999999999998875
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-18 Score=154.95 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=90.0
Q ss_pred CCCccHHHHHH---hC-CCcEEEEcCC---------------------chHHHHHHHHHHhCCCCCCceE----------
Q 024003 145 RLYPGVSDALK---LA-SSRIYIVTSN---------------------QSRFVETLLRELAGVTITPDRL---------- 189 (274)
Q Consensus 145 ~lypGv~e~L~---~~-g~~laIvTnK---------------------~~~~~~~iL~~~~gl~~~f~~v---------- 189 (274)
.++||+.++|+ ++ |+++++.|++ ....+..++++ +|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCc
Confidence 57899999998 44 9999999988 77888999996 9998776554
Q ss_pred ecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 190 YGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 190 ~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
++.+ .++|++.+.++++++|++|++|+||||+.+|+.++++ || ++|.||....+ +... +++++.+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~----ag---~~~~~~~~~~~-~~~~---a~~v~~~ 269 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQT----VG---NGYLLKNATQE-AKNL---HNLITDS 269 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTT----SS---EEEECTTCCHH-HHHH---CCCBCSS
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHh----CC---cEEEECCccHH-HHHh---CCEEcCC
Confidence 2222 2499999999999999999999999999999999997 77 67888887655 4432 2467766
Q ss_pred hhH
Q 024003 266 LSD 268 (274)
Q Consensus 266 ~~~ 268 (274)
+.+
T Consensus 270 ~~~ 272 (289)
T 3gyg_A 270 EYS 272 (289)
T ss_dssp CHH
T ss_pred CCc
Confidence 554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-18 Score=160.63 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=79.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe--------c---CC---CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G---LG---TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~--------g---~~---~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||.+..+++.++++ +|++.+|+..+ | ++ .||||+.+.++++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 479999999999 79999999999999999999996 99987776421 1 12 2499999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
++|++|++++||||+.+|+.+|++ ||+.++
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~----aG~~va 363 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAA----AGLGIA 363 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSEEEE
T ss_pred HcCcChhhEEEEECCHHHHHHHHH----CCCeEE
Confidence 999999999999999999999998 886543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-19 Score=158.37 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=92.2
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHH---HHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~---~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...|+++.+.+. .+|. ..|+||+...... .++.. .++..+|+.+++.+ .||+|+++..+++++|++|++
T Consensus 124 ~~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 201 (264)
T 3epr_A 124 NVTYDKLATATLAIQNGA-LFIGTNPDLNIPTERGLLPGA-GSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQ 201 (264)
T ss_dssp TCCHHHHHHHHHHHHTTC-EEEESCCCSEEEETTEEEECH-HHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGG
T ss_pred CCCHHHHHHHHHHHHCCC-eEEEEcCCccccCCCceecCc-cHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCccc
Confidence 456888888877 5665 4578987642110 00000 11222344455543 369999999999999999999
Q ss_pred EEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 215 LHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 215 ~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
++||||+ .+|+.+|++ ||+++|+|.||++..+++...+..|++++.++.+|..
T Consensus 202 ~~~vGD~~~~Di~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~~ 255 (264)
T 3epr_A 202 AVMVGDNYLTDIMAGIN----NDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTF 255 (264)
T ss_dssp EEEEESCTTTHHHHHHH----HTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCCS
T ss_pred EEEECCCcHHHHHHHHH----CCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHhc
Confidence 9999999 799999998 9999999999999998888776789999999998843
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-18 Score=149.62 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=80.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
..+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+++..+++++|++|++|+||||+.+|+.+++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~-----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~ 157 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ-----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMA 157 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC-----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc-----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHH
Confidence 44555589999999999999999999996 9998777654 79999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
+ ||++++ .|-... +... .+++++.++
T Consensus 158 ~----ag~~~a---~~~~~~-~~~~---~Ad~v~~~~ 183 (211)
T 3ij5_A 158 Q----VGLSVA---VADAHP-LLLP---KAHYVTRIK 183 (211)
T ss_dssp T----SSEEEE---CTTSCT-TTGG---GSSEECSSC
T ss_pred H----CCCEEE---eCCccH-HHHh---hCCEEEeCC
Confidence 8 786543 343332 2222 245777765
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.3e-18 Score=138.38 Aligned_cols=106 Identities=13% Similarity=0.021 Sum_probs=84.0
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.|+++|++++|+||++...++.++++ +|+..+|+.+ ||||+.+..++++++++|++++||||+.+|+.+|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 112 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV-----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLK 112 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 34555589999999999999999999996 9998766653 79999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec------hhHHHhh
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTK 272 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~------~~~~~~~ 272 (274)
+ +|+.++ ++-.. +++.+. +++++.+ +.++.+.
T Consensus 113 ~----ag~~~~---~~~~~-~~~~~~---ad~v~~~~~~~g~~~e~~~~ 150 (164)
T 3e8m_A 113 R----VGIAGV---PASAP-FYIRRL---STIFLEKRGGEGVFREFVEK 150 (164)
T ss_dssp T----SSEEEC---CTTSC-HHHHTT---CSSCCCCCTTTTHHHHHHHH
T ss_pred H----CCCeEE---cCChH-HHHHHh---CcEEeccCCCCcHHHHHHHH
Confidence 8 787543 44333 344432 4577777 5555443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=140.84 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=85.3
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.|+++|++++|+||++...++.++++ +|+..+|+.+ ++||+.+..+++++|++|++++||||+.+|+.+++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~ 127 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR-----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIR 127 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc-----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHH
Confidence 44555589999999999999999999996 9998877765 68999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec------hhHHHhh
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTK 272 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~------~~~~~~~ 272 (274)
+ ||++ +.+|.... +..+. +++++.+ +.++.+.
T Consensus 128 ~----ag~~---~~~~~~~~-~~~~~---ad~v~~~~~~~G~~~~l~~~ 165 (189)
T 3mn1_A 128 R----VGLG---MAVANAAS-FVREH---AHGITRAQGGEGAAREFCEL 165 (189)
T ss_dssp H----SSEE---EECTTSCH-HHHHT---SSEECSSCTTTTHHHHHHHH
T ss_pred H----CCCe---EEeCCccH-HHHHh---CCEEecCCCCCcHHHHHHHH
Confidence 8 7864 45665444 34332 3577777 4555543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-17 Score=138.99 Aligned_cols=106 Identities=17% Similarity=0.159 Sum_probs=84.0
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.|+++|++++|+||++...++.++++ +|+. +|. +. +|||+.+.++++++++++++++||||+.+|+.+++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-~~~---~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~ 119 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-VLH---GI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFA 119 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-EEE---SC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-eEe---CC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHH
Confidence 44555589999999999999999999996 9987 322 22 79999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec------hhHHHhhc
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTKL 273 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~------~~~~~~~~ 273 (274)
+ || +++.+|..... +.+. .++++.+ +.++.+.|
T Consensus 120 ~----ag---~~v~~~~~~~~-~~~~---ad~v~~~~~~~g~~~~l~~~l 158 (176)
T 3mmz_A 120 L----VG---WPVAVASAHDV-VRGA---ARAVTTVPGGDGAIREIASWI 158 (176)
T ss_dssp H----SS---EEEECTTCCHH-HHHH---SSEECSSCTTTTHHHHHHHHH
T ss_pred H----CC---CeEECCChhHH-HHHh---CCEEecCCCCCcHHHHHHHHH
Confidence 8 77 45667765543 3332 3477777 66665543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-17 Score=158.81 Aligned_cols=97 Identities=21% Similarity=0.204 Sum_probs=83.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc---------hH---HHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHH
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQ---------SR---FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 205 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~---------~~---~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l 205 (274)
.+|||+.++|+ ++|++++|+||++ .. .++.+|++ +|+. |+.+++.+ .||+|++++.++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~--fd~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSTTSTTSSHHHHHHH
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCC--EEEEEECCCCCCCCCCHHHHHHHH
Confidence 48999999999 7999999999987 33 38899996 9984 89999865 369999999999
Q ss_pred hhCC----CCCCcEEEEcCCh-----------------hHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 206 KKPE----HQGLRLHFVEDRL-----------------ATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 206 ~~l~----~~~~~~l~VGDs~-----------------~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
+++| ++|++|+||||+. .|+.+|++ ||++++.....|..
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~----aGi~f~~pe~~f~~ 223 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN----VGLPFATPEEFFLK 223 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHH----HTCCEECHHHHHSC
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHH----cCCcccCcHHhhCC
Confidence 9997 9999999999997 89999998 89998876666543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-18 Score=140.21 Aligned_cols=104 Identities=14% Similarity=0.139 Sum_probs=82.2
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhH
Q 024003 148 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 224 (274)
Q Consensus 148 pGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 224 (274)
|+..++|+ ++|++++|+||++...++.++++ +|+..+|+. .+|||+++.+++++++++|++++||||+.+|
T Consensus 39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~D 112 (162)
T 2p9j_A 39 VLDGIGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVD 112 (162)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 45566666 78999999999999999999996 999876653 4799999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 225 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 225 i~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
+.+|++ +|++++ +.+| . +++... +++++.++.+
T Consensus 113 i~~a~~----ag~~~~-~~~~--~-~~~~~~---a~~v~~~~~~ 145 (162)
T 2p9j_A 113 IEVMKK----VGFPVA-VRNA--V-EEVRKV---AVYITQRNGG 145 (162)
T ss_dssp HHHHHH----SSEEEE-CTTS--C-HHHHHH---CSEECSSCSS
T ss_pred HHHHHH----CCCeEE-ecCc--c-HHHHhh---CCEEecCCCC
Confidence 999998 898855 3333 3 344432 5588877543
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8.4e-18 Score=151.31 Aligned_cols=95 Identities=20% Similarity=0.149 Sum_probs=82.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHH--------hCCCCCCceEecCC---CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLREL--------AGVTITPDRLYGLG---TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~--------~gl~~~f~~v~g~~---~~pkp~~l~~~l~ 206 (274)
+++||||.++|+ ++|++++|+|||++.. +...|+ + +|+ +|+.+++.+ .||+|++++.+++
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~-~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYR-MTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFW 263 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHH-HHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHH-hcccccccccCC--CchheeeccCCCCcHHHHHHHHHHH
Confidence 457999999999 7999999999999765 466777 5 788 588888643 3599999999999
Q ss_pred hCCCCCCc-EEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 207 KPEHQGLR-LHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 207 ~l~~~~~~-~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+++..+.+ ++|||||.+|+++|++ |||++|+|+||
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~----aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRR----IGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHH----TTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHH----cCCeEEEecCC
Confidence 99877655 7999999999999998 99999999999
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-17 Score=152.57 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=91.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe--------c---CC---CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G---LG---TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~--------g---~~---~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+..+ | ++ .||||+.+..+++
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 579999999999 78999999999999999999996 99988777532 1 12 2499999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
++|++|++++||||+.+|+.++++ ||+. |.| +..+.+++ .++..+...++.++..
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~----aG~~---va~--~~~~~~~~-~a~~v~~~~~l~~v~~ 310 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAA----AGLG---VAY--HAKPKVEA-KAQTAVRFAGLGGVVC 310 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSEE---EEE--SCCHHHHT-TSSEEESSSCTHHHHH
T ss_pred HcCCChhhEEEEeCCHHHHHHHHH----CCCe---EEe--CCCHHHHh-hCCEEEecCCHHHHHH
Confidence 999999999999999999999998 8874 445 33334443 3443344445555443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.3e-18 Score=141.64 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=84.4
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceEe-c-----CC---C
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-G-----LG---T 194 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v~-g-----~~---~ 194 (274)
...++|||+.++|+ ++|++++|+||+ +...++.+|++ +|+. |+.|+ + .+ .
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCR 115 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSS
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCC--eeEEEEcCCCCccccccc
Confidence 34789999999999 789999999999 78899999996 9997 88875 3 22 3
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
||+|+++..++++++++|++++||||+.+|+++|++ +|+++|+|.+|-.
T Consensus 116 KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~----aG~~~i~v~~~~~ 164 (176)
T 2fpr_A 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN----MGINGLRYDRETL 164 (176)
T ss_dssp TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHH----HTSEEEECBTTTB
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----cCCeEEEEcCCcc
Confidence 699999999999999999999999999999999998 9999999999843
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=140.37 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=69.1
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHH----hcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERA----EAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~----~a~~~P~~~~~~~~~~ 269 (274)
||+|.++..+++++|++|++++||||+ .+|+.+|++ ||+++++|.||++..+++. ..+..|++++.++.+|
T Consensus 187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~----~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKA----IGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH----HTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHH----CCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 599999999999999999999999999 599999998 9999999999999887777 5566789999999999
Q ss_pred HhhcC
Q 024003 270 CTKLK 274 (274)
Q Consensus 270 ~~~~~ 274 (274)
.+.|+
T Consensus 263 ~~~l~ 267 (268)
T 3qgm_A 263 VEALE 267 (268)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 88764
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=142.81 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=79.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHHhCCC--CCCceEecCCCCCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVT--ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~---~~~~~~iL~~~~gl~--~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~ 214 (274)
..+++||+.++|+ ++|++++|+||++ ...+...|+. +|+. .+|+.+++.+...||.+...+++ .+. ..
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~~v~~~~vi~~~~~~~K~~~~~~~~~-~~~--~~ 174 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAPQATKEHILLQDPKEKGKEKRRELVS-QTH--DI 174 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCSSCSTTTEEEECTTCCSSHHHHHHHH-HHE--EE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCCcCCCceEEECCCCCCCcHHHHHHHH-hCC--Cc
Confidence 3689999999999 7999999999999 6678888896 9998 78898888764334444444332 332 34
Q ss_pred EEEEcCChhHHHHhh-------c-----cCccCCCcEEEEeCCCCChHH
Q 024003 215 LHFVEDRLATLKNVI-------K-----EPELDGWNLYLVDWGYNTPKE 251 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~-------~-----~~~~Agv~~i~v~wGy~~~~~ 251 (274)
++||||+.+||.+|+ + +...+|+++|.+.|+.-...+
T Consensus 175 ~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~ 223 (258)
T 2i33_A 175 VLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWE 223 (258)
T ss_dssp EEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHH
T ss_pred eEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhh
Confidence 899999999999994 1 111279999999999755444
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-18 Score=154.28 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=100.5
Q ss_pred CCccHHHHHHhCCCcEEEEcCCchHHH--H--HHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhC----CCCCC
Q 024003 146 LYPGVSDALKLASSRIYIVTSNQSRFV--E--TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP----EHQGL 213 (274)
Q Consensus 146 lypGv~e~L~~~g~~laIvTnK~~~~~--~--~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l----~~~~~ 213 (274)
.|+++.+.|+++|++ +|+||++.... . .+++. .++..+|+.++|++ .||+|+++..+++++ |++|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 677777777789999 99999987765 3 23453 67778899998876 379999999999999 99999
Q ss_pred cEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHH----hcCCCCCceeechhHH
Q 024003 214 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA----EAASMPRIQLLQLSDF 269 (274)
Q Consensus 214 ~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~----~a~~~P~~~~~~~~~~ 269 (274)
+++||||+. +||.+|++ +|+++|+|.||++..+++. ..+..|++++.++.+|
T Consensus 227 ~~~~VGD~~~~Di~~A~~----aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNK----FGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GEEEEESCTTTHHHHHHH----HTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred eEEEECCCcHHHHHHHHH----cCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 999999995 99999998 8999999999999887776 5556789999998765
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-16 Score=132.92 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=79.2
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
+.|+++|++++|+||++...++.++++ +|+..+|+.+ ||||+.+..++++++++|++++||||+.+|+.++++
T Consensus 56 ~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~- 128 (191)
T 3n1u_A 56 KLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQ- 128 (191)
T ss_dssp HHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH-
T ss_pred HHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH-
Confidence 445579999999999999999999996 9998766654 799999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
+|+.+ .++-... .+... +++++.+
T Consensus 129 ---ag~~~---~~~~~~~-~~~~~---ad~v~~~ 152 (191)
T 3n1u_A 129 ---VGLGV---AVSNAVP-QVLEF---ADWRTER 152 (191)
T ss_dssp ---SSEEE---ECTTCCH-HHHHH---SSEECSS
T ss_pred ---CCCEE---EeCCccH-HHHHh---CCEEecC
Confidence 88765 3454433 33332 3477776
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.5e-16 Score=133.78 Aligned_cols=97 Identities=19% Similarity=0.133 Sum_probs=78.2
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.+.+++++++++|++++||||+.+|+.++++
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~- 134 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEK- 134 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTT-
T ss_pred HHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH-
Confidence 445589999999999999999999996 9998666533 799999999999999999999999999999999997
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
||+. +..|-.. +++.+. +++++.+
T Consensus 135 ---ag~~---va~~na~-~~~~~~---ad~v~~~ 158 (195)
T 3n07_A 135 ---VALR---VCVADGH-PLLAQR---ANYVTHI 158 (195)
T ss_dssp ---SSEE---EECTTSC-HHHHHH---CSEECSS
T ss_pred ---CCCE---EEECChH-HHHHHh---CCEEEcC
Confidence 7754 3445333 344432 3467666
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.7e-17 Score=146.57 Aligned_cols=125 Identities=16% Similarity=0.177 Sum_probs=102.6
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHH--HHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFV--ETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~--~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...+|||+.++|+ ++|+++ |+||++.... ..++....++..+|+.++|.+ .||+|+++..++++ ++|++
T Consensus 128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~ 204 (263)
T 1zjj_A 128 PDLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE 204 (263)
T ss_dssp TTCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred CCCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence 4678999999998 789998 9999987554 222321134445677777765 36999999999998 99999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
++||||+. +||.+|++ +|+.+++|.||+...+++......|++++.++.++.+.|+
T Consensus 205 ~~~VGD~~~~Di~~A~~----aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 205 LWMVGDRLDTDIAFAKK----FGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp EEEEESCTTTHHHHHHH----TTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred EEEECCChHHHHHHHHH----cCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 99999995 99999998 9999999999999888887665679999999999987664
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-17 Score=150.81 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=102.9
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHH--H-HHHHHHhC-CCCCCceEecCC----CCCcHHHHHHHHhhCCC
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFV--E-TLLRELAG-VTITPDRLYGLG----TGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~--~-~iL~~~~g-l~~~f~~v~g~~----~~pkp~~l~~~l~~l~~ 210 (274)
....+|||+.++|+ ++|+ ++|+||++.... . .++.. +| +..+|+.+++.+ .||+|+++..+++++|+
T Consensus 153 ~~~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi 230 (306)
T 2oyc_A 153 DEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPG-TGSLAAAVETASGRQALVVGKPSPYMFECITENFSI 230 (306)
T ss_dssp CTTCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEEC-HHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCC-CcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCC
Confidence 34578999999998 5688 999999987644 2 23332 44 445667776655 36999999999999999
Q ss_pred CCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHh------cCCCCCceeechhHHHhhcC
Q 024003 211 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE------AASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 211 ~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~------a~~~P~~~~~~~~~~~~~~~ 274 (274)
+|++++||||+. +|+++|++ ||+++++|.||++..+++.+ ....|++++.++.+|...|+
T Consensus 231 ~~~e~l~vGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 231 DPARTLMVGDRLETDILFGHR----CGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp CGGGEEEEESCTTTHHHHHHH----HTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred ChHHEEEECCCchHHHHHHHH----CCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 999999999996 99999998 99999999999998877764 34578999999999987764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-16 Score=132.21 Aligned_cols=95 Identities=11% Similarity=0.015 Sum_probs=77.6
Q ss_pred HhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 155 KLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 155 ~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
+++|++++|+||++...++.++++ +|+..+|+. .+|||+.+.+++++++++|++++||||+.+|+.++++
T Consensus 48 ~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~~-----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~---- 117 (180)
T 1k1e_A 48 MDADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA---- 117 (180)
T ss_dssp HHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----
T ss_pred HHCCCeEEEEeCCCcHHHHHHHHH-cCCceeecC-----CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----
Confidence 379999999999999999999996 999866532 3799999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
+|+.++ ++... +++.. .+++++.+.
T Consensus 118 ag~~~~---~~~~~-~~~~~---~ad~v~~~~ 142 (180)
T 1k1e_A 118 CGTSFA---VADAP-IYVKN---AVDHVLSTH 142 (180)
T ss_dssp SSEEEE---CTTSC-HHHHT---TSSEECSSC
T ss_pred cCCeEE---eCCcc-HHHHh---hCCEEecCC
Confidence 887754 34333 34433 255887775
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=131.34 Aligned_cols=94 Identities=12% Similarity=-0.030 Sum_probs=72.7
Q ss_pred EEEEc-CCchHHHHHHHHHHhCCCCCCceEecCC-------CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 161 IYIVT-SNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 161 laIvT-nK~~~~~~~iL~~~~gl~~~f~~v~g~~-------~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
++++| ||+.+.++.++++ ++ .+|+.+.|.. .+||+..+..+++++|+++++++||||+.+|+.++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~-- 187 (231)
T 1wr8_A 113 LVIMRETINVETVREIINE-LN--LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKV-- 187 (231)
T ss_dssp EEECTTTSCHHHHHHHHHH-TT--CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHH--
T ss_pred EEEECCCCCHHHHHHHHHh-cC--CcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH--
Confidence 57888 8899999999996 65 4677663321 2399999999999999999999999999999999998
Q ss_pred ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
+|+. ++| |.+. +++++ .+++++.++.+
T Consensus 188 --ag~~-v~~--~~~~-~~~~~---~a~~v~~~~~e 214 (231)
T 1wr8_A 188 --VGYK-VAV--AQAP-KILKE---NADYVTKKEYG 214 (231)
T ss_dssp --SSEE-EEC--TTSC-HHHHT---TCSEECSSCHH
T ss_pred --cCCe-EEe--cCCC-HHHHh---hCCEEecCCCc
Confidence 7876 444 5444 34543 35688887654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-14 Score=128.52 Aligned_cols=107 Identities=15% Similarity=0.018 Sum_probs=73.1
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC--CCCCCceEecCC------C--CCcHHHHHHHHhhCCCCCC
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG------T--GPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~------~--~pkp~~l~~~l~~l~~~~~ 213 (274)
++++.++++ ....++.+++++ ...+.+.+. +. +...+..+.++. . .+|+..+..+++++|++++
T Consensus 138 ~~~~~~~~~~~~~~~~ki~~~~~~--~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 214 (279)
T 4dw8_A 138 IRETNDFLTDITLPVAKCLIVGDA--GKLIPVESE-LCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTRE 214 (279)
T ss_dssp EEECSCHHHHSCSCCSCEEEESCH--HHHHHHHHH-HHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGG
T ss_pred cccHHHHHHhhcCCceEEEEeCCH--HHHHHHHHH-HHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 345555554 566777777643 222333332 21 333466665542 1 2889999999999999999
Q ss_pred cEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 214 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
++++|||+.||+.++++ || ++|.||...++ ++++ .+++..|..
T Consensus 215 ~~i~~GD~~NDi~m~~~----ag---~~vam~na~~~-~k~~---A~~v~~~~~ 257 (279)
T 4dw8_A 215 EVIAIGDGYNDLSMIKF----AG---MGVAMGNAQEP-VKKA---ADYITLTND 257 (279)
T ss_dssp GEEEEECSGGGHHHHHH----SS---EEEECTTSCHH-HHHH---CSEECCCGG
T ss_pred HEEEECCChhhHHHHHH----cC---cEEEcCCCcHH-HHHh---CCEEcCCCC
Confidence 99999999999999998 77 79999987655 4443 236766644
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=7.8e-15 Score=128.80 Aligned_cols=97 Identities=6% Similarity=-0.090 Sum_probs=72.0
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----------CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHH
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 226 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----------~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 226 (274)
.++...+++ ++....+.+++. ++.. |+.+.+.. ..+|+..+.++++++|++++++++|||+.||+.
T Consensus 155 ~~~~ki~~~-~~~~~~~~~~~~-l~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 155 QDIHKICLW-SNEKVFDEVKDI-LQDK--MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIV 230 (274)
T ss_dssp CCCCEEEEE-CCHHHHHHHHHH-HGGG--EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHH
T ss_pred cCeEEEEEE-cCHHHHHHHHHH-hhcc--eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHH
Confidence 444444445 777888888885 6542 55555432 138999999999999999999999999999999
Q ss_pred HhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 227 NVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 227 aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
++++ || ++|.||....+ +++. .+++..|..+
T Consensus 231 m~~~----ag---~~vam~na~~~-~k~~---A~~v~~~~~e 261 (274)
T 3fzq_A 231 MFQA----SD---VTIAMKNSHQQ-LKDI---ATSICEDIFD 261 (274)
T ss_dssp HHHT----CS---EEEEETTSCHH-HHHH---CSEEECCGGG
T ss_pred HHHh----cC---ceEEecCccHH-HHHh---hhheeCCCch
Confidence 9998 77 78899987765 4433 2477776543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.3e-15 Score=130.37 Aligned_cols=99 Identities=7% Similarity=-0.042 Sum_probs=73.0
Q ss_pred hCCCcEEEE--cCCchHHHHHHHHHHhCCCCCCceEecCCC--------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 156 LASSRIYIV--TSNQSRFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 156 ~~g~~laIv--TnK~~~~~~~iL~~~~gl~~~f~~v~g~~~--------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
+..+++.|+ +++.+...+.+.+. ++ ..+..+.++.. .+|+..+..+++++|++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~-~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPA-WN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHH-HT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHH-hc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 467889998 45555566677774 65 34555655431 2799999999999999999999999999999
Q ss_pred HHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 226 KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
.+.+. || ++|.+|-..++ +++. + +++..+..+
T Consensus 241 ~ml~~----ag---~~vam~na~~~-~k~~-A--~~v~~s~~e 272 (283)
T 3dao_A 241 EMLQN----AG---ISYAVSNARQE-VIAA-A--KHTCAPYWE 272 (283)
T ss_dssp HHHHH----SS---EEEEETTSCHH-HHHH-S--SEEECCGGG
T ss_pred HHHHh----CC---CEEEcCCCCHH-HHHh-c--CeECCCCCC
Confidence 99997 77 66777866554 4443 2 477777655
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-14 Score=129.68 Aligned_cols=97 Identities=11% Similarity=-0.053 Sum_probs=68.1
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhC--CCC-CCceEecCCC--------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHH
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAG--VTI-TPDRLYGLGT--------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 226 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~g--l~~-~f~~v~g~~~--------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 226 (274)
.+++.+.+ ++ ...+.+++. +. +.. .+..+.+... .+|+..+..+++++|++++++++|||+.||+.
T Consensus 182 ~~ki~~~~-~~-~~~~~~~~~-l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~ 258 (304)
T 3l7y_A 182 FFKLTLQV-KE-EESAQIMKA-IADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIE 258 (304)
T ss_dssp EEEEEEEC-CG-GGHHHHHHH-HHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred eEEEEEEc-CH-HHHHHHHHH-HHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHH
Confidence 34555555 33 334555553 42 444 4666665541 28999999999999999999999999999999
Q ss_pred HhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 227 NVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 227 aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
++++ || ++|.+|...++ ++++ + +++..+..+
T Consensus 259 m~~~----ag---~~vam~na~~~-~k~~-A--d~v~~~~~e 289 (304)
T 3l7y_A 259 MLKL----AK---YSYAMANAPKN-VKAA-A--NYQAKSNDE 289 (304)
T ss_dssp HHHH----CT---EEEECTTSCHH-HHHH-C--SEECCCGGG
T ss_pred HHHh----cC---CeEEcCCcCHH-HHHh-c--cEEcCCCCc
Confidence 9998 77 78888976654 4443 2 377777554
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.1e-14 Score=127.55 Aligned_cols=112 Identities=11% Similarity=0.039 Sum_probs=76.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-------C-CCcHHHHHHHHhhCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-------~-~pkp~~l~~~l~~l~~~~ 212 (274)
..+++++.++++ ...+++.+ ++.++ ....+++........+..+.+.. . .+|+..+..+++++|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~ki~~-~~~~~-~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~ 218 (290)
T 3dnp_A 141 VQFVESLSDLLMDEPVSAPVIEV-YTEHD-IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSM 218 (290)
T ss_dssp EEECSCHHHHHHHSCCCCSEEEE-ECCGG-GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCG
T ss_pred ccccCCHHHHHhcCCCCceEEEE-eCCHH-HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCH
Confidence 456788999887 46677755 44333 23344442111223355555432 1 289999999999999999
Q ss_pred CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 213 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 213 ~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
+++++|||+.||+.+++. || ++|.+|-..++ +++. + +++..|..+
T Consensus 219 ~~~i~~GD~~NDi~m~~~----ag---~~vam~na~~~-~k~~-A--d~v~~s~~e 263 (290)
T 3dnp_A 219 DDVVAIGHQYDDLPMIEL----AG---LGVAMGNAVPE-IKRK-A--DWVTRSNDE 263 (290)
T ss_dssp GGEEEEECSGGGHHHHHH----SS---EEEECTTSCHH-HHHH-S--SEECCCTTT
T ss_pred HHEEEECCchhhHHHHHh----cC---CEEEecCCcHH-HHHh-c--CEECCCCCc
Confidence 999999999999999998 77 57888866554 4443 2 367666544
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=5e-14 Score=124.46 Aligned_cols=91 Identities=13% Similarity=0.020 Sum_probs=57.6
Q ss_pred EcCCchHHHHHHHHHHhC--CCCCCceEecCCC----C----CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 164 VTSNQSRFVETLLRELAG--VTITPDRLYGLGT----G----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 164 vTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~~----~----pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
++..+....+.+++. +. +...+..+.++.. . .|+..+..+++++|++++++++|||+.||+.++++
T Consensus 156 ~~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~--- 231 (279)
T 3mpo_A 156 MFVDYPQVIEQVKAN-MPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKY--- 231 (279)
T ss_dssp EEECCHHHHHHHHHH-CCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHH---
T ss_pred EEcCCHHHHHHHHHH-HHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHh---
Confidence 333455666677764 42 1123455554431 1 59999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
|| ++|.+|...++ ++++ + +++..|.
T Consensus 232 -ag---~~vam~na~~~-~k~~-A--~~v~~~~ 256 (279)
T 3mpo_A 232 -AG---LGVAMGNAIDE-VKEA-A--QAVTLTN 256 (279)
T ss_dssp -ST---EECBC---CCH-HHHH-C--SCBC---
T ss_pred -cC---ceeeccCCCHH-HHHh-c--ceeccCC
Confidence 77 68888876654 4433 2 2555553
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-14 Score=129.05 Aligned_cols=92 Identities=9% Similarity=-0.089 Sum_probs=65.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHH---HhCCCCCCceEecCC-------C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhH
Q 024003 156 LASSRIYIVTSNQSRFVETLLRE---LAGVTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 224 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~---~~gl~~~f~~v~g~~-------~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 224 (274)
..++...++++++....+.+.+. .++ ..+..+++.. . .+|+..+..+++++|++++++++|||+.||
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~ND 237 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQAMNARWG--DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMND 237 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHHHHHHHG--GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHHhc--CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhh
Confidence 35666667776655544444332 132 2344455433 1 279999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEeCCCCChHHHHhcC
Q 024003 225 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 256 (274)
Q Consensus 225 i~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~ 256 (274)
+.+.+. || ++|.+|...++-.+.+.
T Consensus 238 i~ml~~----ag---~~vAm~Na~~~vk~~A~ 262 (285)
T 3pgv_A 238 AEMLSM----AG---KGCIMANAHQRLKDLHP 262 (285)
T ss_dssp HHHHHH----SS---EEEECTTSCHHHHHHCT
T ss_pred HHHHHh----cC---CEEEccCCCHHHHHhCC
Confidence 999998 77 78999977665444443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.43 E-value=5e-14 Score=125.80 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=76.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHHhCCCCCC--ceEecCCCCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~----~~~~~iL~~~~gl~~~f--~~v~g~~~~pkp~~l~~~l~~l~~~~~ 213 (274)
..++|||+.++|+ ++|++++||||+++ +.+..-|++ +|+..++ ..+...+...|......+.+. |..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy~-- 174 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GYE-- 174 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TEE--
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHhc-CCC--
Confidence 4789999999999 79999999999976 599999996 9998777 455444444666666665554 432
Q ss_pred cEEEEcCChhHHHH--------hhccCccCCCcEEEEeCCCC
Q 024003 214 RLHFVEDRLATLKN--------VIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 214 ~~l~VGDs~~Di~a--------A~~~~~~Agv~~i~v~wGy~ 247 (274)
.++||||..+|+.+ +|+ ++|..+++.||..
T Consensus 175 iv~~vGD~~~Dl~~~~~~~~~~~r~----a~v~~~~~~fG~~ 212 (262)
T 3ocu_A 175 IVLYVGDNLDDFGNTVYGKLNADRR----AFVDQNQGKFGKT 212 (262)
T ss_dssp EEEEEESSGGGGCSTTTTCCHHHHH----HHHHHTGGGBTTT
T ss_pred EEEEECCChHHhccccccCCHHHHH----HHHHHHHHHhCCC
Confidence 48999999999998 554 7788889999963
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.43 E-value=6.2e-14 Score=125.05 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=74.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHHhCCCCCCc--eEecCCCCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPD--RLYGLGTGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~----~~~~~iL~~~~gl~~~f~--~v~g~~~~pkp~~l~~~l~~l~~~~~ 213 (274)
..++|||+.++|+ ++|++++||||+++ +.+...|++ +|+..+++ .+.+.+...|..... .+.+.|. .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~-~L~~~gy--~ 174 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFK-QVEDMGY--D 174 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHH-HHHTTTC--E
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCCCCChHHHHH-HHHhcCC--C
Confidence 4789999999999 79999999999976 499999996 99987774 554444334544444 4444444 3
Q ss_pred cEEEEcCChhHHHH--------hhccCccCCCcEEEEeCCCC
Q 024003 214 RLHFVEDRLATLKN--------VIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 214 ~~l~VGDs~~Di~a--------A~~~~~~Agv~~i~v~wGy~ 247 (274)
-++||||+.+|+.+ +|+ ++|..+++.||..
T Consensus 175 iv~~iGD~~~Dl~~~~~~~~~~~r~----a~v~~~~~~fG~~ 212 (260)
T 3pct_A 175 IVLFVGDNLNDFGDATYKKSNAERR----DFVAKNSKAFGKK 212 (260)
T ss_dssp EEEEEESSGGGGCGGGTTCCHHHHH----HHHHHTGGGBTTT
T ss_pred EEEEECCChHHcCcccccCCHHHHH----HHHHHHHHHhCCC
Confidence 48999999999998 565 7888899999963
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.42 E-value=5.3e-14 Score=124.67 Aligned_cols=99 Identities=7% Similarity=-0.043 Sum_probs=74.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhC--CCCCCceEecCC------C--CCcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG------T--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~------~--~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
+.+++++|+|++.. ++.+++. ++ +..+|+.+.++. . .+|+..+..+++++|++++++++|||+.||+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVIDK-LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHHHH-HHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHHHH-HHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 46889999998865 5566653 44 556678777652 1 3999999999999999999999999999999
Q ss_pred HHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 226 KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
.+++. +|+ +|.+|.... ++++. ++++..+..+
T Consensus 221 ~m~~~----ag~---~va~~na~~-~~k~~---a~~v~~~~~~ 252 (271)
T 1rlm_A 221 EMLKM----ARY---SFAMGNAAE-NIKQI---ARYATDDNNH 252 (271)
T ss_dssp HHHHH----CSE---EEECTTCCH-HHHHH---CSEECCCGGG
T ss_pred HHHHH----cCC---eEEeCCccH-HHHHh---CCeeCcCCCC
Confidence 99997 776 455776554 45442 3477766543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3e-13 Score=118.84 Aligned_cols=68 Identities=7% Similarity=-0.008 Sum_probs=55.5
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH--HHhh
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD--FCTK 272 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~--~~~~ 272 (274)
+||+..+..+++++|++++++++|||+.+|+.++++ ||+ +|.||.... +++.. +++++.+..+ +.+.
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~----ag~---~v~~~n~~~-~~~~~---a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH----AAI---GVAMGQAKE-DVKAA---ADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE---EEECTTSCH-HHHHH---SSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----cCc---eEEecCccH-HHHhh---CCEEeccCchhhHHHH
Confidence 399999999999999999999999999999999998 775 677886554 45432 4588888888 6554
Q ss_pred c
Q 024003 273 L 273 (274)
Q Consensus 273 ~ 273 (274)
|
T Consensus 255 l 255 (261)
T 2rbk_A 255 M 255 (261)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=109.41 Aligned_cols=100 Identities=15% Similarity=0.078 Sum_probs=80.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.|+++|++++|+||++...++.++++ +|+..+|+. .+|||+.+.++++++|++|++++||||+.+|+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~ 134 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVME 134 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 44555588999999999999999999996 998765542 379999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
+ +|+.++ ||.+.. ++.. .+++++.++
T Consensus 135 ~----ag~~~~---~~~~~~-~~~~---~ad~v~~~~ 160 (188)
T 2r8e_A 135 K----VGLSVA---VADAHP-LLIP---RADYVTRIA 160 (188)
T ss_dssp T----SSEEEE---CTTSCT-TTGG---GSSEECSSC
T ss_pred H----CCCEEE---ecCcCH-HHHh---cCCEEEeCC
Confidence 7 887653 454332 3332 256888876
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.33 E-value=6.2e-12 Score=109.97 Aligned_cols=62 Identities=13% Similarity=0.060 Sum_probs=50.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
.|...+..+++++|++++++++|||+.||+.+++. ||+ +|.+|. ..+++++. + +++..+..+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~----ag~---~vam~n-a~~~~k~~-A--~~v~~~~~~ 244 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSF----VGT---GVAMGN-AHEEVKRV-A--DFVTKPVDK 244 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHH----SSE---EEEETT-CCHHHHHT-C--SEEECCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHh----CCc---EEEeCC-CcHHHHHh-C--CEEeCCCCc
Confidence 78999999999999999999999999999999997 775 455684 44566654 3 477766543
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-11 Score=108.19 Aligned_cols=61 Identities=10% Similarity=-0.009 Sum_probs=50.9
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+|+..+..+++++|++++++++|||+.||+.+++. || ++|.+|...+ +++++ + +++..|..
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~----ag---~~vam~na~~-~~k~~-A--d~v~~~~~ 254 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKA----AG---IGVAMGNASE-KVQSV-A--DFVTDTVD 254 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH----SS---EEEECTTSCH-HHHHT-C--SEECCCTT
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHh----CC---CeEEeCCCcH-HHHHh-c--CEeeCCCC
Confidence 89999999999999999999999999999999998 77 6788896654 46554 3 47776654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.30 E-value=6.8e-12 Score=110.97 Aligned_cols=60 Identities=18% Similarity=0.109 Sum_probs=49.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
+|+..+..+++++|++++++++|||+.+|+.++++ ||+ +|.||... +++++. +++++.+.
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----ag~---~v~~~n~~-~~~~~~---a~~v~~~~ 249 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE----AGL---RVAMENAI-EKVKEA---SDIVTLTN 249 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT----CSE---EEECTTSC-HHHHHH---CSEECCCT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHH----cCC---EEEecCCC-HHHHhh---CCEEEccC
Confidence 89999999999999999999999999999999997 775 67889655 455554 34777664
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-11 Score=101.81 Aligned_cols=97 Identities=7% Similarity=0.041 Sum_probs=72.8
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHH-HhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRE-LAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~-~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 228 (274)
..+.|+++|++++|+||| ..++.++++ .+|+. .+.|. ++||+.+.++++++|++|++++||||+.+|+.++
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----~~~g~--~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~ 115 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----TEVSV--SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECL 115 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC----EECSC--SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE----EEECC--CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHH
Confidence 345666899999999999 788899993 04543 33343 5899999999999999999999999999999999
Q ss_pred hccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 229 IKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 229 ~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
++ ||+++ ++ + +..+++++. + ++++.+
T Consensus 116 ~~----ag~~~-a~--~-na~~~~k~~-A--d~v~~~ 141 (168)
T 3ewi_A 116 KR----VGLSA-VP--A-DACSGAQKA-V--GYICKC 141 (168)
T ss_dssp HH----SSEEE-EC--T-TCCHHHHTT-C--SEECSS
T ss_pred HH----CCCEE-Ee--C-ChhHHHHHh-C--CEEeCC
Confidence 98 88774 34 3 223445443 2 366654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.9e-11 Score=105.31 Aligned_cols=70 Identities=17% Similarity=0.023 Sum_probs=51.6
Q ss_pred chHHHHHHHHHHhCCCCCCceEecCC------CCCcHHHHHHHHhhCCCCC--CcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 168 QSRFVETLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 168 ~~~~~~~iL~~~~gl~~~f~~v~g~~------~~pkp~~l~~~l~~l~~~~--~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
........+++ .+ |+.+.++. ..+|+..+.++++++|+++ +++++|||+.||+.+++. ||
T Consensus 147 ~~~~~~~~l~~-~~----~~~~~s~~~~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~----ag--- 214 (259)
T 3zx4_A 147 EVEAVLEALEA-VG----LEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRA----VD--- 214 (259)
T ss_dssp THHHHHHHHHH-TT----CEEEECSSSEEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHT----SS---
T ss_pred HHHHHHHHHHH-CC----cEEEecCceEEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHh----CC---
Confidence 44555555664 43 45555542 1478999999999999999 999999999999999997 77
Q ss_pred EEEeCCCCCh
Q 024003 240 YLVDWGYNTP 249 (274)
Q Consensus 240 i~v~wGy~~~ 249 (274)
++|..|-..+
T Consensus 215 ~~va~~na~~ 224 (259)
T 3zx4_A 215 LAVYVGRGDP 224 (259)
T ss_dssp EEEECSSSCC
T ss_pred CeEEeCChhh
Confidence 4455565443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.5e-12 Score=108.61 Aligned_cols=95 Identities=7% Similarity=-0.057 Sum_probs=81.5
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
+.++||+.++|+ .+.++++|+||+++.+++.+++. +++..+|+.+++.+.- ....++.+.++.+|.++++|++|||
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~-ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHH-HCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 679999999999 44599999999999999999996 9999999999987632 2225667788999999999999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCC
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
|..++.++.+ +||++ ..|-
T Consensus 133 s~~~~~~~~~----ngi~i--~~~~ 151 (181)
T 2ght_A 133 SPASYVFHPD----NAVPV--ASWF 151 (181)
T ss_dssp CGGGGTTCTT----SBCCC--CCCS
T ss_pred CHHHhccCcC----CEeEe--cccc
Confidence 9999999887 78885 6774
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.6e-10 Score=98.86 Aligned_cols=60 Identities=7% Similarity=-0.139 Sum_probs=47.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
+|+..+..++++++++++++++|||+.||+.+++. ||+. |..|.... ++++. +++++.+.
T Consensus 153 ~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~----ag~~---va~~n~~~-~~k~~---a~~v~~~~ 212 (227)
T 1l6r_A 153 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL----PVRK---ACPANATD-NIKAV---SDFVSDYS 212 (227)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS----SSEE---EECTTSCH-HHHHH---CSEECSCC
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHH----cCce---EEecCchH-HHHHh---CCEEecCC
Confidence 89999999999999999999999999999999997 7763 44565444 45542 34777664
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=4.2e-12 Score=108.57 Aligned_cols=90 Identities=7% Similarity=-0.072 Sum_probs=79.2
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCC--CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~--pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
+.++||+.++|+ .+.++++|+||+++.+++.+|+. +++..+|+.+++++.- .| +++.+.++++|.++++||+||
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~-ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADL-LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEE
Confidence 578999999999 33499999999999999999996 9999999999987632 23 667788899999999999999
Q ss_pred CChhHHHHhhccCccCCCcE
Q 024003 220 DRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~ 239 (274)
||..++.++++ |||++
T Consensus 145 Ds~~~~~~~~~----ngi~i 160 (195)
T 2hhl_A 145 NSPASYIFHPE----NAVPV 160 (195)
T ss_dssp SCGGGGTTCGG----GEEEC
T ss_pred CCHHHhhhCcc----CccEE
Confidence 99999999987 78886
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.8e-10 Score=99.38 Aligned_cols=61 Identities=16% Similarity=0.011 Sum_probs=49.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+|...+..+++.+|++++++++|||+.||+.+++. ||+ +++|.|+ . +++++. +++++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~-~va~~~~--~-~~~~~~---a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEA----AGK-GVAMGNA--R-EDIKSI---ADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHH----SSE-EEECTTC--C-HHHHHH---CSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCc-EEEEcCC--C-HHHHhh---CceeecCCC
Confidence 89999999999999999999999999999999997 888 5677554 3 445543 347776654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-10 Score=105.57 Aligned_cols=103 Identities=12% Similarity=0.155 Sum_probs=70.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC------------------------CC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT------------------------GP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~------------------------~p 196 (274)
..++|++.++|+ + |++++|+|++...++...++. +++. +.+.+... ++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh-hhhh---hhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence 367999999999 6 999999999998888888885 6652 33333210 11
Q ss_pred c---------------HHHHH------------HHHhhCCCCCCc----EEEEcCChhHHHHhhccCccC----CCcEEE
Q 024003 197 K---------------VNVLK------------QLQKKPEHQGLR----LHFVEDRLATLKNVIKEPELD----GWNLYL 241 (274)
Q Consensus 197 k---------------p~~l~------------~~l~~l~~~~~~----~l~VGDs~~Di~aA~~~~~~A----gv~~i~ 241 (274)
. |..+. .+++ ++++++ +++|||+.||+.+++. | |+. |+
T Consensus 177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml~~----A~~~~g~~-va 249 (332)
T 1y8a_A 177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMFEA----ARGLGGVA-IA 249 (332)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHHHH----HHHTTCEE-EE
T ss_pred hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHHHH----HhhcCCeE-EE
Confidence 1 12222 1122 667788 9999999999999997 7 875 44
Q ss_pred EeCCCCChHHHHhcCCCCCceeec
Q 024003 242 VDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 242 v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
| ++ .+++++. .++++.+
T Consensus 250 m-na---~~~lk~~---Ad~v~~~ 266 (332)
T 1y8a_A 250 F-NG---NEYALKH---ADVVIIS 266 (332)
T ss_dssp E-SC---CHHHHTT---CSEEEEC
T ss_pred e-cC---CHHHHhh---CcEEecC
Confidence 5 43 3455542 3478777
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.93 E-value=5.8e-10 Score=97.60 Aligned_cols=91 Identities=15% Similarity=-0.017 Sum_probs=61.7
Q ss_pred EEcCCchHHHHHHHHHHhCCC----CCCceEecCCCCCcHHHHHHHHhhCCC-CCCcEEEEcCChhHHHHhhccCccCCC
Q 024003 163 IVTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEH-QGLRLHFVEDRLATLKNVIKEPELDGW 237 (274)
Q Consensus 163 IvTnK~~~~~~~iL~~~~gl~----~~f~~v~g~~~~pkp~~l~~~l~~l~~-~~~~~l~VGDs~~Di~aA~~~~~~Agv 237 (274)
+++++++. ...+++ .++. ..+--|.. .-.|...+..+++.+++ +++++++|||+.||+.+.+. ||+
T Consensus 147 ~~~~~~~~--~~~l~~-~~~~~~~s~~~~ei~~--g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~----ag~ 217 (249)
T 2zos_A 147 FEWSRDGW--EEVLVE-GGFKVTMGSRFYTVHG--NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV----VDK 217 (249)
T ss_dssp EECSSSCH--HHHHHH-TTCEEEECSSSEEEEC--SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT----SSE
T ss_pred EecCCHHH--HHHHHh-CCEEEEecCCeEEEeC--CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHh----CCc
Confidence 45555544 445554 4543 11212322 23799999999999998 89999999999999999997 774
Q ss_pred cEEEEeCCCCChHHHHhcCCCCCceeechhH
Q 024003 238 NLYLVDWGYNTPKERAEAASMPRIQLLQLSD 268 (274)
Q Consensus 238 ~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~ 268 (274)
+|.+|....+++++. +++++.++.+
T Consensus 218 ---~va~gna~~~~~~~~---a~~v~~~~~~ 242 (249)
T 2zos_A 218 ---VFIVGSLKHKKAQNV---SSIIDVLEVI 242 (249)
T ss_dssp ---EEEESSCCCTTEEEE---SSHHHHHHHH
T ss_pred ---EEEeCCCCccccchh---ceEEeccccc
Confidence 677787664556553 4466665543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-09 Score=96.61 Aligned_cols=61 Identities=13% Similarity=-0.009 Sum_probs=49.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+|+..+..+++++|++++++++|||+.||+.+++. ||+ +|.+|.... ++++. +++++.+..
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~---~va~~n~~~-~~~~~---a~~v~~~~~ 258 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY----AGV---GVAVDNAIP-SVKEV---ANFVTKSNL 258 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE---EEECTTSCH-HHHHH---CSEECCCTT
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHH----CCc---EEEecCCcH-HHHhh---CCEEecCCC
Confidence 89999999999999999999999999999999997 775 566675554 45543 447776644
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.7e-09 Score=105.29 Aligned_cols=107 Identities=20% Similarity=0.217 Sum_probs=81.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
.++.|++.+.++ ++|+++.++|+++...++.+.++ +|++. +++.- +..|.+.+.++.++ ++++|||
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~----~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 525 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDL----VIAEVLPHQKSEEVKKLQAK-----EVVAFVG 525 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSE----EECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCE----EEEeCCHHhHHHHHHHHhhC-----CeEEEEe
Confidence 578999999999 89999999999999999999996 99864 33322 33677777766543 7899999
Q ss_pred CChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHh
Q 024003 220 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCT 271 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~ 271 (274)
|+.||+.+.++ || +||.+|-++.. +....|+++ .++..+..
T Consensus 526 Dg~ND~~al~~----A~---vgiamg~g~~~----a~~~AD~vl~~~~~~~i~~ 568 (645)
T 3j08_A 526 DGINDAPALAQ----AD---LGIAVGSGSDV----AVESGDIVLIRDDLRDVVA 568 (645)
T ss_dssp CSSSCHHHHHH----SS---EEEEECCCSCC----SSCCSSSEESSCCTTHHHH
T ss_pred CCHhHHHHHHh----CC---EEEEeCCCcHH----HHHhCCEEEecCCHHHHHH
Confidence 99999999997 66 88999954432 223345777 55555543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.77 E-value=4.7e-08 Score=88.07 Aligned_cols=60 Identities=12% Similarity=-0.007 Sum_probs=47.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee-ch
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL-QL 266 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~-~~ 266 (274)
+|+..+..+++.+|++++++++|||+.||+.+++. ||+ +|.+|.... ++++. +++++. +.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~---~va~~na~~-~~k~~---a~~v~~~~~ 284 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSN----FKY---SFAVANATD-SAKSH---AKCVLPVSH 284 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHS----CSE---EEECTTCCH-HHHHH---SSEECSSCT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----cCC---eEEEcCCcH-HHHhh---CCEEEccCC
Confidence 89999999999999999999999999999999997 776 445665544 45542 346666 53
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.73 E-value=3.9e-08 Score=88.12 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=70.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----C-------------CCcHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T-------------GPKVNVLK 202 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~-------------~pkp~~l~ 202 (274)
.++-||+.++++ ++|+++.|+|+-....++.++++ +|+......|++.. . .-++.+..
T Consensus 140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 578999999999 79999999999999999999997 99865433344321 0 12334443
Q ss_pred HHH--hhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCC
Q 024003 203 QLQ--KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 246 (274)
Q Consensus 203 ~~l--~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy 246 (274)
+.. .++.-...+++||||+.||+-+++. ....-+++..||
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~----l~~advgiaiGf 260 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADG----VANVEHILKIGY 260 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTT----CSCCSEEEEEEE
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhC----ccccCeEEEEEe
Confidence 322 2333456789999999999999874 222337888887
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.73 E-value=3.7e-08 Score=92.37 Aligned_cols=115 Identities=13% Similarity=0.149 Sum_probs=81.5
Q ss_pred hccCHHHHHHHHHHHHHHHHhhhhc------------------ccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHH
Q 024003 114 WSENREALIELSGKVRDEWMDTDFT------------------TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFV 172 (274)
Q Consensus 114 ~~~~~~~~~~~~~~~r~~~~~~y~~------------------~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~ 172 (274)
.|++.+++.+......+.....-.. .+....++|||+.|+++ ++|++++|||.-...++
T Consensus 172 ~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v 251 (385)
T 4gxt_A 172 KNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIV 251 (385)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred cCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHH
Confidence 4889999888888777665432100 01112358999999999 89999999999999999
Q ss_pred HHHHHHHhCCCC--CCceEecCC-----C---------------C-CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 173 ETLLRELAGVTI--TPDRLYGLG-----T---------------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 173 ~~iL~~~~gl~~--~f~~v~g~~-----~---------------~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.++ +|+.. ..+.|+|.. . + -|+..|.+.+++ ......++++|||.+|+.+-+
T Consensus 252 ~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~ 329 (385)
T 4gxt_A 252 RAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLK 329 (385)
T ss_dssp HHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHH
T ss_pred HHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHh
Confidence 999996 87642 224555521 0 0 267777776543 244556899999999999987
Q ss_pred c
Q 024003 230 K 230 (274)
Q Consensus 230 ~ 230 (274)
+
T Consensus 330 ~ 330 (385)
T 4gxt_A 330 E 330 (385)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.63 E-value=3.7e-08 Score=87.39 Aligned_cols=53 Identities=9% Similarity=-0.126 Sum_probs=41.8
Q ss_pred CcHHHHHHHHhhCC-CCCCc--EEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHH
Q 024003 196 PKVNVLKQLQKKPE-HQGLR--LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 253 (274)
Q Consensus 196 pkp~~l~~~l~~l~-~~~~~--~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~ 253 (274)
+|+..+..+++.+| +++++ +++|||+.||+.+.+. +|+ .|+|.||....++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~-~va~~n~~~~~~~~~ 244 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV----MDY-AVIVKGLNREGVHLH 244 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHT----SSE-EEECCCCC-------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHh----CCc-eEEecCCCccchhhc
Confidence 89999999999999 99999 9999999999999997 787 477777765455554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.6e-08 Score=93.83 Aligned_cols=74 Identities=18% Similarity=0.162 Sum_probs=59.7
Q ss_pred CCcHHHHHHHHhhC----------------------CC-----CCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCC
Q 024003 195 GPKVNVLKQLQKKP----------------------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGY 246 (274)
Q Consensus 195 ~pkp~~l~~~l~~l----------------------~~-----~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy 246 (274)
||.|.++..+++.+ |+ ++++++||||+. +||.+|++ ||+++|+|.||+
T Consensus 246 KP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~----aG~~ti~V~~G~ 321 (352)
T 3kc2_A 246 KPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQN----YGWNSCLVKTGV 321 (352)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHH----HTCEEEECSSSS
T ss_pred CCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHH----cCCEEEEEccCC
Confidence 69999888776543 22 578999999999 59999998 999999999999
Q ss_pred CChHHHHhcCCCCCceeechhHHHhhc
Q 024003 247 NTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 247 ~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
...++ ......|++++.++.++.+.|
T Consensus 322 ~~~~~-~~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 322 YNEGD-DLKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp CCTTC-CCTTCCCSEECSSHHHHHHHH
T ss_pred CCccc-ccccCCCCEEECCHHHHHHHH
Confidence 87654 223567999999999986643
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.40 E-value=8.1e-08 Score=89.66 Aligned_cols=80 Identities=11% Similarity=0.113 Sum_probs=63.5
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCc-eEecCCCCCcHHHHHHHHhhC-CCCCCcEEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPD-RLYGLGTGPKVNVLKQLQKKP-EHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~-~v~g~~~~pkp~~l~~~l~~l-~~~~~~~l~ 217 (274)
.+.+-||+.++|+ .+++.++|.|+....+++.+++. ++... +|. .+++.+..+. ...+-++++ |.+++++|+
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~-LDp~~~~f~~ri~sr~~~g~--~~~KdL~~L~~~dl~~vii 149 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVVV 149 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HCTTSCSSSSCEECTTTSSC--SSCCCGGGTCSSCCTTEEE
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHH-hccCCceeeeEEEEecCCCC--cceecHHHhcCCCCceEEE
Confidence 3678899999999 89999999999999999999996 99877 787 7876543221 122335555 889999999
Q ss_pred EcCChhHH
Q 024003 218 VEDRLATL 225 (274)
Q Consensus 218 VGDs~~Di 225 (274)
|.|++.=.
T Consensus 150 iDd~~~~~ 157 (372)
T 3ef0_A 150 IDDRGDVW 157 (372)
T ss_dssp EESCSGGG
T ss_pred EeCCHHHc
Confidence 99998544
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=5.4e-07 Score=87.48 Aligned_cols=94 Identities=13% Similarity=0.185 Sum_probs=75.9
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC-------------CCCCCceEecCCCCCcHHH----------
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------------VTITPDRLYGLGTGPKVNV---------- 200 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g-------------l~~~f~~v~g~~~~pkp~~---------- 200 (274)
=|.+..+|+ +.| ++.++||.+..+++.+++..+| +..+||.|+....||..-.
T Consensus 248 dp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd~ 326 (555)
T 2jc9_A 248 DGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDT 326 (555)
T ss_dssp CTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEET
T ss_pred ChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEeec
Confidence 378888888 789 9999999999999999996337 3468999776544444221
Q ss_pred ------------------------HHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeC
Q 024003 201 ------------------------LKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 201 ------------------------l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~w 244 (274)
+..+++.+|..+++++||||.. .||..++. .+|+++++|--
T Consensus 327 ~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk---~~GWrTiLViP 392 (555)
T 2jc9_A 327 KTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKK---RQGWRTFLVIP 392 (555)
T ss_dssp TTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHH---HHCCEEEEECT
T ss_pred CCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHh---hcCeEEEEEEe
Confidence 4788888999999999999997 69999973 28999999954
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-05 Score=81.41 Aligned_cols=107 Identities=20% Similarity=0.200 Sum_probs=80.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
.++.|++.+.++ ++|+++.++|+.+...++.+.++ +|++ .++..- +..|.+.+..+.++ ++++|||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 603 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVG 603 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCc----EEEccCCHHHHHHHHHHHhcC-----CeEEEEE
Confidence 478899999999 89999999999999999999996 9986 344332 33677777766543 7899999
Q ss_pred CChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHh
Q 024003 220 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCT 271 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~ 271 (274)
|+.||+.+-+. || +|+..|-++. . +...-|+++ .++..+..
T Consensus 604 Dg~ND~~al~~----A~---vgiamg~g~~--~--a~~~AD~vl~~~~~~~i~~ 646 (723)
T 3j09_A 604 DGINDAPALAQ----AD---LGIAVGSGSD--V--AVESGDIVLIRDDLRDVVA 646 (723)
T ss_dssp CSSTTHHHHHH----SS---EEEECCCCSC--C--SSCCSSEECSSCCTTHHHH
T ss_pred CChhhHHHHhh----CC---EEEEeCCCcH--H--HHHhCCEEEeCCCHHHHHH
Confidence 99999999997 66 7888884432 2 222334777 45555543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=2.4e-05 Score=71.61 Aligned_cols=110 Identities=10% Similarity=0.091 Sum_probs=72.4
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhc---------ccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHH---
Q 024003 115 SENREALIELSGKVRDEWMDTDFT---------TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL--- 179 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~---------~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~--- 179 (274)
|++.+++.+...++.+.-...... +.....++||++.++++ ++|+++.|||..++.+++.+-+..
T Consensus 104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ 183 (327)
T 4as2_A 104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYG 183 (327)
T ss_dssp TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGS
T ss_pred CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccc
Confidence 778888777766665532210000 01112368999999999 899999999999999999998741
Q ss_pred hCCCCCCceEecCCC------------------------------------------C-CcHHHHHHHHhhCCCCCCcEE
Q 024003 180 AGVTITPDRLYGLGT------------------------------------------G-PKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 180 ~gl~~~f~~v~g~~~------------------------------------------~-pkp~~l~~~l~~l~~~~~~~l 216 (274)
+|| .-+.|+|... + -|+..|...++. | ...++
T Consensus 184 ygI--p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g--~~Pi~ 258 (327)
T 4as2_A 184 YNA--KPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-W--KRPIL 258 (327)
T ss_dssp CCC--CGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-S--CCCSE
T ss_pred cCC--CHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh-C--CCCeE
Confidence 344 3467777320 1 266666665532 2 34579
Q ss_pred EEcCC-hhHHHHhh
Q 024003 217 FVEDR-LATLKNVI 229 (274)
Q Consensus 217 ~VGDs-~~Di~aA~ 229 (274)
.+||| ..|..+=.
T Consensus 259 a~Gns~dgD~~ML~ 272 (327)
T 4as2_A 259 VAGDTPDSDGYMLF 272 (327)
T ss_dssp EEESCHHHHHHHHH
T ss_pred EecCCCCCCHHHHh
Confidence 99999 57977653
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00015 Score=75.41 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=77.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc----e-----------------------EecCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R-----------------------LYGLG 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~----~-----------------------v~g~~ 193 (274)
-++-||+.++++ ++|+++.++|+.....+..+.++ .|+..... . +++.-
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 467899999999 89999999999999999999997 99965432 1 22211
Q ss_pred -CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHH
Q 024003 194 -TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFC 270 (274)
Q Consensus 194 -~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~ 270 (274)
+..|...+..+.++ .+.++||||+.||+.+-++ |+ +|+.-| +..+..+++ + |+++. +...+.
T Consensus 681 ~P~~K~~~v~~l~~~----g~~v~~~GDG~ND~~alk~----Ad---vgiamg-~g~~~ak~a-A--d~vl~~~~~~~i~ 745 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSY----DEITAMTGDGVNDAPALKK----AE---IGIAMG-SGTAVAKTA-S--EMVLADDNFSTIV 745 (995)
T ss_dssp CSSHHHHHHHHHHTT----TCCEEEEECSGGGHHHHHH----ST---EEEEET-TSCHHHHHT-C--SEEETTCCHHHHH
T ss_pred CHHHHHHHHHHHHHC----CCEEEEEcCCchhHHHHHH----CC---eEEEeC-CCCHHHHHh-C--CEEECCCCHHHHH
Confidence 12344555554443 4789999999999999997 66 455557 333333332 3 37773 466654
Q ss_pred h
Q 024003 271 T 271 (274)
Q Consensus 271 ~ 271 (274)
+
T Consensus 746 ~ 746 (995)
T 3ar4_A 746 A 746 (995)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00011 Score=64.44 Aligned_cols=66 Identities=15% Similarity=0.252 Sum_probs=43.3
Q ss_pred hCCCcEEEEcC---CchHHHHHHHHHHhCCC-CCCceEecCCCCCcHHHHHHHHhhCCCCCCcEE-EEcCChhHHHHhhc
Q 024003 156 LASSRIYIVTS---NQSRFVETLLRELAGVT-ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH-FVEDRLATLKNVIK 230 (274)
Q Consensus 156 ~~g~~laIvTn---K~~~~~~~iL~~~~gl~-~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l-~VGDs~~Di~aA~~ 230 (274)
++|++++++|| ++.......++. +|+. ..++.+++.. ......+++ ..+ .++. .+|.. ......++
T Consensus 44 ~~g~~~~~~Tn~~~r~~~~~~~~l~~-lg~~~~~~~~ii~~~-----~~~~~~l~~-~~~-~~v~~~lg~~-~l~~~l~~ 114 (284)
T 2hx1_A 44 AQGQDYYIVTNDASRSPEQLADSYHK-LGLFSITADKIISSG-----MITKEYIDL-KVD-GGIVAYLGTA-NSANYLVS 114 (284)
T ss_dssp HTTCEEEEEECCCSSCHHHHHHHHHH-TTCTTCCGGGEEEHH-----HHHHHHHHH-HCC-SEEEEEESCH-HHHHTTCB
T ss_pred HCCCEEEEEeCCCCcCHHHHHHHHHH-CCcCCCCHhhEEcHH-----HHHHHHHHh-hcC-CcEEEEecCH-HHHHHHHH
Confidence 68999999998 778888888986 9998 7777777632 222222322 122 2666 78875 44444444
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.59 E-value=8.2e-05 Score=75.09 Aligned_cols=95 Identities=14% Similarity=0.200 Sum_probs=70.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
.++-|++.+.++ ++|+++.++|+.+...++.+.++ +|++. ++..-. ..|.+.+..+.+ ..+.++|||
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~----v~a~~~P~~K~~~v~~l~~----~g~~V~~vG 623 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKK----VVAEIMPEDKSRIVSELKD----KGLIVAMAG 623 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCC----EECSCCHHHHHHHHHHHHH----HSCCEEEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCE----EEEecCHHHHHHHHHHHHh----cCCEEEEEE
Confidence 357799999998 78999999999999999999997 99864 333221 134455555443 456799999
Q ss_pred CChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 220 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
|+.||+.+-+. |+ +|+..|-++....+.
T Consensus 624 DG~ND~paL~~----Ad---vGIAmg~g~d~a~~~ 651 (736)
T 3rfu_A 624 DGVNDAPALAK----AD---IGIAMGTGTDVAIES 651 (736)
T ss_dssp CSSTTHHHHHH----SS---EEEEESSSCSHHHHH
T ss_pred CChHhHHHHHh----CC---EEEEeCCccHHHHHh
Confidence 99999999987 66 778888655443333
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=9.5e-05 Score=63.99 Aligned_cols=64 Identities=11% Similarity=-0.106 Sum_probs=49.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc----CCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a----~~~P~~~~~~~~ 267 (274)
+|+..+.++++++|++++++++|||+.||+.+.++ +|+ +|.+|... +++++. ...++++..+..
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----~g~---~va~~na~-~~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET----SAR---GVIVRNAQ-PELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS----SSE---EEECTTCC-HHHHHHHHHHCCTTEEECSSCH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhc----cCc---EEEEcCCc-HHHHHHHhcccccceeecCCcc
Confidence 89999999999999999999999999999999996 675 56667554 456653 112336665543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00062 Score=65.07 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=73.5
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh--------CCCCCCceEecCCCCCc------------------
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGPK------------------ 197 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~--------gl~~~f~~v~g~~~~pk------------------ 197 (274)
=|.+..+|+ ++|.++.++||.+-.+++.+++..+ .+..+||.||....||.
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 267 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 267 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCE
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCcc
Confidence 377888887 7999999999999999999999545 35579999997542221
Q ss_pred --------H-----HHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEe
Q 024003 198 --------V-----NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 198 --------p-----~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+ --+..+.+.+|....+++||||+. .||..++. ..|.++++|-
T Consensus 268 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk---~~gWrT~~Ii 324 (470)
T 4g63_A 268 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKK---DCNWRTALVV 324 (470)
T ss_dssp EECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHH---SCCCEEEEEC
T ss_pred cccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhh---ccCCeEEEEh
Confidence 0 014555666788888999999997 69999987 4899999994
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00075 Score=62.24 Aligned_cols=82 Identities=21% Similarity=0.164 Sum_probs=50.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCc----hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQ----SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~----~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
++||+.|.|+ ++|+++.++||.+ +..++.+-+. +|+....+.|+.+.. +- ...++ ....++.|
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~-lgi~~~~~~i~ts~~-~~----~~~~~----~~~~v~vi 99 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSK-LDVDVSPLQIIQSHT-PY----KSLVN----KYSRILAV 99 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHH-HTSCCCGGGEECTTG-GG----GGGTT----TCSEEEEE
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHh-cCCCCChhhEeehHH-HH----HHHHh----cCCEEEEE
Confidence 4466666655 7899999999975 4555555555 899877788886531 10 11111 23567777
Q ss_pred cCChhHHHHhhccCccCCCcEEEE
Q 024003 219 EDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 219 GDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
|-. .-.+..++ +|+..+.-
T Consensus 100 G~~-~l~~~l~~----~G~~~v~~ 118 (352)
T 3kc2_A 100 GTP-SVRGVAEG----YGFQDVVH 118 (352)
T ss_dssp SST-THHHHHHH----HTCSEEEE
T ss_pred CCH-HHHHHHHh----CCCeEecc
Confidence 754 44445554 78887753
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.33 E-value=2.7e-05 Score=66.68 Aligned_cols=92 Identities=11% Similarity=-0.021 Sum_probs=71.0
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCC-CCCceEecCCCC-CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~-~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
...=||+.++|+ .+++.++|.|+..+.+++.+++. ++.. .+|+..+..+.- ..+....+.++.+|.++++||+|.
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~-LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiID 136 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEK-LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIID 136 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEE
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEE
Confidence 356699999999 89999999999999999999996 8886 488876654421 112224456778899999999999
Q ss_pred CChhHHHHhhccCccCCCcEE
Q 024003 220 DRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i 240 (274)
|+..-+..... +||++.
T Consensus 137 Dsp~~~~~~p~----N~I~I~ 153 (204)
T 3qle_A 137 TDPNSYKLQPE----NAIPME 153 (204)
T ss_dssp SCTTTTTTCGG----GEEECC
T ss_pred CCHHHHhhCcc----CceEee
Confidence 99998866554 566653
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00032 Score=56.59 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=25.5
Q ss_pred CccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHHhCCC
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVT 183 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~---~~~~~iL~~~~gl~ 183 (274)
.|++.++|+ ++|++++|+|+.+. ..+...+++ +|+.
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~-~gi~ 67 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE 67 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH-cCCC
Confidence 356666666 78999999999874 455555665 6764
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.01 Score=61.97 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=66.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC------------------------c---------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------D--------- 187 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f------------------------~--------- 187 (274)
-++-|++.+.++ ++|+++.++|+-....+..+.++ .|+...- .
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 356799999998 79999999999999999999997 9986310 1
Q ss_pred ----------------eEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCC-CCh
Q 024003 188 ----------------RLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY-NTP 249 (274)
Q Consensus 188 ----------------~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy-~~~ 249 (274)
.+++.-+ ..|-.++..+ ++.| +.++||||+.||+.+=+. |+ +||.-|- ++.
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~l-q~~g---~~V~~iGDG~ND~paLk~----Ad---vGIAmg~~gtd 745 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGC-QRQG---AIVAVTGDGVNDSPALKK----AD---IGVAMGISGSD 745 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHH-HHTT---CCEEEEECSGGGHHHHHH----SS---EEEEESSSCCH
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHH-HhCC---CEEEEEcCCcchHHHHHh----CC---ceEEeCCccCH
Confidence 1222211 1233344433 3333 679999999999999987 66 5666674 443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.012 Score=60.71 Aligned_cols=92 Identities=12% Similarity=0.056 Sum_probs=67.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC-c------------------------eEecCC-CC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP-D------------------------RLYGLG-TG 195 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~------------------------~v~g~~-~~ 195 (274)
+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+.... + .|++.- +.
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 57799999998 79999999999999999999997 9996311 0 122221 12
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
.|...+..+.+ .| +.+.|+||+.||.-+=++ |+ +|+.-|-++
T Consensus 614 ~K~~iV~~Lq~-~g---~~Vam~GDGvNDapaLk~----Ad---vGIAmg~gt 655 (920)
T 1mhs_A 614 HKYNVVEILQQ-RG---YLVAMTGDGVNDAPSLKK----AD---TGIAVEGSS 655 (920)
T ss_dssp HHHHHHHHHHT-TT---CCCEECCCCGGGHHHHHH----SS---EEEEETTSC
T ss_pred HHHHHHHHHHh-CC---CeEEEEcCCcccHHHHHh----CC---cCccccccc
Confidence 35566665544 34 678999999999999887 55 566667333
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0042 Score=55.07 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=27.3
Q ss_pred CccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHHhCCC-CCCceEe
Q 024003 147 YPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVT-ITPDRLY 190 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTn---K~~~~~~~iL~~~~gl~-~~f~~v~ 190 (274)
+|++.+.|+ ++|++++++|| ++.......++. +|+. ...+.++
T Consensus 39 ~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~-~g~~~~~~~~i~ 88 (306)
T 2oyc_A 39 VPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR-LGFGGLRAEQLF 88 (306)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCCSCCGGGEE
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHh-cCCCcCChhhEE
Confidence 344444444 67888999996 666666677775 7776 3344444
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0031 Score=49.11 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=14.1
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
|+|+||+||||+|+-.
T Consensus 2 k~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANT 17 (126)
T ss_dssp CEEEECSTTTTBCCCC
T ss_pred CEEEEecCCCCCCCCC
Confidence 7999999999998753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0013 Score=57.24 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=27.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCC----hhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDR----LATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs----~~Di~aA~~ 230 (274)
.|...+.++++ ++++++.+||+ .||+.+-+.
T Consensus 187 ~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~ 221 (246)
T 3f9r_A 187 DKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTD 221 (246)
T ss_dssp SGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTC
T ss_pred CHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhC
Confidence 67888888776 88999999996 999999885
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.025 Score=59.02 Aligned_cols=111 Identities=15% Similarity=0.146 Sum_probs=70.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC------------------------ceEe-cCCC-
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------DRLY-GLGT- 194 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f------------------------~~v~-g~~~- 194 (274)
-++-|++.+.++ ++|+++.++|+-+...+..+.++ .|+...- ..++ |.+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 367799999998 79999999999999999999997 9984210 0111 1110
Q ss_pred --------------------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 195 --------------------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 195 --------------------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
.-.|+--..+.+.+.-....++|+||+.||+.+=+. || +||.-|-+..+..++
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~----A~---vGIAMg~ng~d~aK~ 754 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSDAAKN 754 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHH----CC---eeEEeCCccCHHHHH
Confidence 012222222222222223569999999999999987 66 677777443444444
Q ss_pred cCCCCCceeec
Q 024003 255 AASMPRIQLLQ 265 (274)
Q Consensus 255 a~~~P~~~~~~ 265 (274)
+ ++ +++.+
T Consensus 755 a-AD--~Vl~~ 762 (1034)
T 3ixz_A 755 A-AD--MILLD 762 (1034)
T ss_pred h-cC--EEecc
Confidence 3 23 55543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0022 Score=55.10 Aligned_cols=32 Identities=13% Similarity=0.051 Sum_probs=26.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~ 230 (274)
.|...+..+ +|+++++++.||| +.||+.+-+.
T Consensus 188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~ 223 (246)
T 2amy_A 188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTD 223 (246)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHC
T ss_pred chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHh
Confidence 677777777 8999999999999 9999999986
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.0044 Score=53.81 Aligned_cols=49 Identities=12% Similarity=-0.030 Sum_probs=38.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
.|...+..+ +|+++++++.||| +.||+.+-+. +|...++| | +..+++++
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~----~~~~g~av--~-NA~~~~k~ 249 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFAD----PRTVGHSV--V-SPQDTVQR 249 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHS----TTSEEEEC--S-SHHHHHHH
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhc----CccCcEEe--c-CCCHHHHH
Confidence 688888887 8999999999999 9999999996 66655666 4 33445543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.013 Score=50.26 Aligned_cols=30 Identities=13% Similarity=-0.013 Sum_probs=20.8
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
|+.+|+|||||||+++-..+ .....+++++
T Consensus 2 ~~~li~~DlDGTLl~~~~~~-~~~~~~l~~~ 31 (244)
T 1s2o_A 2 RQLLLISDLDNTWVGDQQAL-EHLQEYLGDR 31 (244)
T ss_dssp CSEEEEECTBTTTBSCHHHH-HHHHHHHHTT
T ss_pred CCeEEEEeCCCCCcCCHHHH-HHHHHHHHHh
Confidence 33599999999999986543 4444555443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.012 Score=48.39 Aligned_cols=16 Identities=44% Similarity=0.630 Sum_probs=14.0
Q ss_pred CceEEEecCcccccCH
Q 024003 2 EDLYALDFDGVICDSC 17 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~ 17 (274)
.|+|+||+||||+|+-
T Consensus 26 ik~vifD~DGTL~~~~ 41 (188)
T 2r8e_A 26 IRLLILDVDGVLSDGL 41 (188)
T ss_dssp CSEEEECCCCCCBCSE
T ss_pred CCEEEEeCCCCcCCCC
Confidence 4899999999999963
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.00 E-value=0.035 Score=57.03 Aligned_cols=81 Identities=12% Similarity=0.130 Sum_probs=59.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC---Cce-----------------------EecCCC-
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT---PDR-----------------------LYGLGT- 194 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~---f~~-----------------------v~g~~~- 194 (274)
+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+... -.. |++.-.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 56799999998 89999999999999999999996 999531 011 121111
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
..|-..+..+.++ | +.+.|+||+.||.-+=++
T Consensus 567 ~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~ 598 (885)
T 3b8c_A 567 EHKYEIVKKLQER-K---HIVGMTGDGVNDAPALKK 598 (885)
T ss_dssp HHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHHHH
T ss_pred HHHHHHHHHHHHC-C---CeEEEEcCCchhHHHHHh
Confidence 1344556555443 3 678999999999999887
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.43 E-value=0.017 Score=49.40 Aligned_cols=30 Identities=7% Similarity=0.024 Sum_probs=28.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
.|-..+..+++++| +++|||+.||+.+=+.
T Consensus 160 ~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~ 189 (239)
T 1u02_A 160 NKGSAIRSVRGERP-----AIIAGDDATDEAAFEA 189 (239)
T ss_dssp CHHHHHHHHHTTSC-----EEEEESSHHHHHHHHT
T ss_pred CHHHHHHHHHhhCC-----eEEEeCCCccHHHHHH
Confidence 78899999999998 8999999999999986
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.22 E-value=0.036 Score=45.38 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=35.5
Q ss_pred ccHHHHHH--hCCCcEEEEcCCch-HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhH
Q 024003 148 PGVSDALK--LASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 224 (274)
Q Consensus 148 pGv~e~L~--~~g~~laIvTnK~~-~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 224 (274)
+.+...++ .-|+. .+...++. ...+.++++ +|+..---..+| |+..+-.++ +..|+. +.++|....
T Consensus 62 ~~~~~~l~~l~lgi~-~~~g~~~K~~~l~~~~~~-~gi~~~~~~~vG-D~~nDi~~~----~~ag~~----~a~~na~~~ 130 (168)
T 3ewi_A 62 ACSKQTLSALKLDCK-TEVSVSDKLATVDEWRKE-MGLCWKEVAYLG-NEVSDEECL----KRVGLS----AVPADACSG 130 (168)
T ss_dssp CCCHHHHHTTCCCCC-EECSCSCHHHHHHHHHHH-TTCCGGGEEEEC-CSGGGHHHH----HHSSEE----EECTTCCHH
T ss_pred HHHHHHHHHhCCCcE-EEECCCChHHHHHHHHHH-cCcChHHEEEEe-CCHhHHHHH----HHCCCE----EEeCChhHH
Confidence 45555555 44555 33333332 455677775 888753233444 443555544 344554 667787544
Q ss_pred HH
Q 024003 225 LK 226 (274)
Q Consensus 225 i~ 226 (274)
+.
T Consensus 131 ~k 132 (168)
T 3ewi_A 131 AQ 132 (168)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.90 E-value=0.095 Score=49.62 Aligned_cols=79 Identities=10% Similarity=0.103 Sum_probs=59.2
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCce-EecCCCCCcHHHHHHHHhhC-CCCCCcEEEE
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDR-LYGLGTGPKVNVLKQLQKKP-EHQGLRLHFV 218 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~-v~g~~~~pkp~~l~~~l~~l-~~~~~~~l~V 218 (274)
+.+=||+.++|+ .+.+.++|.|+-.+.+|..+++. ++... +|.. ++..+.... ...+-|.++ |.+.+.+|+|
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~-LDp~~~~f~~Rl~sRd~cg~--~~~KdL~~ll~rdl~~vvII 158 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVVVI 158 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-HCTTSTTTTTCEECTTTSSC--SSCCCGGGTCSSCCTTEEEE
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hccCCccccceEEEecCCCC--ceeeehHHhcCCCcceEEEE
Confidence 567799999999 89999999999999999999996 88876 6764 775442110 011123433 8888999999
Q ss_pred cCChhHH
Q 024003 219 EDRLATL 225 (274)
Q Consensus 219 GDs~~Di 225 (274)
.|++.=.
T Consensus 159 Dd~p~~~ 165 (442)
T 3ef1_A 159 DDRGDVW 165 (442)
T ss_dssp ESCSGGG
T ss_pred ECCHHHh
Confidence 9998533
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=91.18 E-value=0.029 Score=51.01 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=61.5
Q ss_pred CCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC--c--eEecCCC------CCcHHHHHHHHhhC-----
Q 024003 146 LYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITP--D--RLYGLGT------GPKVNVLKQLQKKP----- 208 (274)
Q Consensus 146 lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f--~--~v~g~~~------~pkp~~l~~~l~~l----- 208 (274)
.=||+.++|+ .+.+.++|.|+-...+++.+++. ++....+ . .+..... ........+-|..+
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~-Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL-LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH-TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 3499999999 78999999999999999999996 8776543 2 1222211 01111112223333
Q ss_pred CCCCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 209 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
|.+++++|+|.|++.-...... +|+++.
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~p~----NgI~I~ 271 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMNPK----SGLKIR 271 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTSGG----GEEECC
T ss_pred CCChhHEEEEeCChHHhccCcC----ceEEeC
Confidence 7888999999999998876655 455543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.75 E-value=0.084 Score=44.24 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=13.7
Q ss_pred ceEEEecCcccccCH
Q 024003 3 DLYALDFDGVICDSC 17 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~ 17 (274)
++++||||||||+|.
T Consensus 29 ~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 29 KCVVIDLDETLVHSS 43 (195)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEEccccceEccc
Confidence 689999999999984
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=89.59 E-value=0.29 Score=42.12 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=22.0
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
.|+|+||+||||+++-..+......+++++
T Consensus 13 ~kli~~DlDGTLl~~~~~is~~~~~al~~l 42 (262)
T 2fue_A 13 RVLCLFDVDGTLTPARQKIDPEVAAFLQKL 42 (262)
T ss_dssp CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred eEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence 389999999999998654545555555555
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=87.63 E-value=0.44 Score=44.17 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=26.3
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHh-CCCCCCCCCc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVR-WPSLFDGVDS 41 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~-~~~~~~gl~~ 41 (274)
|.|+||.|||+.+- ..+....-.+..++ ..+.+.|++.
T Consensus 2 ~~~~fdvdgv~~~~-~~~~d~~~ltv~~~l~~~~~~~~~~ 40 (384)
T 1qyi_A 2 KKILFDVDGVFLSE-ERCFDVSALTVYELLMDKCYLGLHS 40 (384)
T ss_dssp CEEEECSBTTTBCS-HHHHHHHHHHHHHHHHCTTTTCCSC
T ss_pred ceEEEecCceeech-hhhccHHHHHHHHHHcCccccCCCc
Confidence 78999999999955 45666666666666 3334456654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=87.02 E-value=0.55 Score=39.80 Aligned_cols=13 Identities=38% Similarity=0.736 Sum_probs=12.4
Q ss_pred ceEEEecCccccc
Q 024003 3 DLYALDFDGVICD 15 (274)
Q Consensus 3 ~~ilFDlDGTLvD 15 (274)
++|+|||||||++
T Consensus 2 kli~~DlDGTLl~ 14 (239)
T 1u02_A 2 SLIFLDYDGTLVP 14 (239)
T ss_dssp CEEEEECBTTTBC
T ss_pred eEEEEecCCCCcC
Confidence 7899999999998
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=86.76 E-value=0.17 Score=41.61 Aligned_cols=15 Identities=13% Similarity=0.226 Sum_probs=13.6
Q ss_pred ceEEEecCcccccCH
Q 024003 3 DLYALDFDGVICDSC 17 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~ 17 (274)
+++++||||||++|.
T Consensus 16 ~~LVLDLD~TLvhs~ 30 (181)
T 2ght_A 16 ICVVINLDETLVHSS 30 (181)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEECCCCCeECCc
Confidence 689999999999984
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=85.21 E-value=3.8 Score=35.86 Aligned_cols=79 Identities=13% Similarity=0.163 Sum_probs=58.7
Q ss_pred CCCcEEEEcCCc-hHHHHHHHHHHhCCCCCCc--eEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 157 ASSRIYIVTSNQ-SRFVETLLRELAGVTITPD--RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 157 ~g~~laIvTnK~-~~~~~~iL~~~~gl~~~f~--~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
.+..=.+||+-. -+..-++| .+|+..+|. -|+....-.|...++.+.++.| +.-.-+.|||+.---++||.
T Consensus 175 ~~~vNVLVTs~qLVPaLaK~L--LygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~--- 248 (274)
T 3geb_A 175 PNCVNVLVTTTQLIPALAKVL--LYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKK--- 248 (274)
T ss_dssp TTEEEEEEESSCHHHHHHHHH--HTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHH---
T ss_pred CceeEEEEecCchHHHHHHHH--HhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHH---
Confidence 344445555544 44555555 489988774 5776543489999999999997 55789999999999999997
Q ss_pred cCCCcEEEE
Q 024003 234 LDGWNLYLV 242 (274)
Q Consensus 234 ~Agv~~i~v 242 (274)
.++|++-+
T Consensus 249 -~n~PFwrI 256 (274)
T 3geb_A 249 -HNMPFWRI 256 (274)
T ss_dssp -TTCCEEEC
T ss_pred -cCCCeEEe
Confidence 89999776
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=84.70 E-value=0.31 Score=39.43 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=14.0
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
|+++||+||||+++..
T Consensus 15 k~~~~D~Dgtl~~~~~ 30 (176)
T 2fpr_A 15 KYLFIDRDGTLISEPP 30 (176)
T ss_dssp EEEEECSBTTTBCCC-
T ss_pred cEEEEeCCCCeEcCCC
Confidence 7999999999999865
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=83.77 E-value=1.3 Score=37.60 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=49.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--HhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~--~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
..++|++.+.|+ ++|++++++||.+......+.++ .+|+...++.+++. .......+++.. ...++..|
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~-----~~~~~~~l~~~~-~~~~v~vi 89 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITS-----GLATRLYMSKHL-DPGKIFVI 89 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEH-----HHHHHHHHHHHS-CCCCEEEE
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEec-----HHHHHHHHHHhC-CCCEEEEE
Confidence 346799999998 78999999999875444444332 16776555666653 122333333332 23578888
Q ss_pred cCChhHHHHhhc
Q 024003 219 EDRLATLKNVIK 230 (274)
Q Consensus 219 GDs~~Di~aA~~ 230 (274)
|.. ......++
T Consensus 90 G~~-~l~~~l~~ 100 (263)
T 1zjj_A 90 GGE-GLVKEMQA 100 (263)
T ss_dssp SCH-HHHHHHHH
T ss_pred cCH-HHHHHHHH
Confidence 885 44444444
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=81.12 E-value=5.1 Score=35.11 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=70.4
Q ss_pred CCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE----ecCCCC-CcHHHHHHHHhhCCC
Q 024003 142 GANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL----YGLGTG-PKVNVLKQLQKKPEH 210 (274)
Q Consensus 142 ~~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v----~g~~~~-pkp~~l~~~l~~l~~ 210 (274)
+.-.++|.+.++++ +.|+++..+++..-..++++.+ .|-.-. .. +|+..+ .+++.+..+.+..++
T Consensus 113 d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~--~G~~aV--mPlg~pIGsG~Gi~~~~lI~~I~e~~~v 188 (265)
T 1wv2_A 113 DQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAE--IGCIAV--MPLAGLIGSGLGICNPYNLRIILEEAKV 188 (265)
T ss_dssp CTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHH--SCCSEE--EECSSSTTCCCCCSCHHHHHHHHHHCSS
T ss_pred CccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--hCCCEE--EeCCccCCCCCCcCCHHHHHHHHhcCCC
Confidence 33467899999998 5799988667777777877766 565421 22 232222 689999999887777
Q ss_pred CCCcEEEEc---CChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 211 QGLRLHFVE---DRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 211 ~~~~~l~VG---Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
+ |+++ -++.|+..|.+ .|+..|.|..+...
T Consensus 189 P----VI~eGGI~TPsDAa~Ame----LGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 189 P----VLVDAGVGTASDAAIAME----LGCEAVLMNTAIAH 221 (265)
T ss_dssp C----BEEESCCCSHHHHHHHHH----HTCSEEEESHHHHT
T ss_pred C----EEEeCCCCCHHHHHHHHH----cCCCEEEEChHHhC
Confidence 6 7777 68889999998 89999999988754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 274 | |||
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.98 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.98 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.97 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.97 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.96 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.94 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.93 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.92 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.9 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.89 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.86 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.83 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.82 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.82 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.81 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.8 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.78 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.77 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.75 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.73 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.71 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.7 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.69 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.41 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.98 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.84 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.69 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.57 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.51 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.4 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.34 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.23 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.21 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.16 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.13 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.96 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.66 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.46 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.27 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.18 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 96.9 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.81 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.58 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 95.94 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 95.55 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 95.39 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.0 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 94.94 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 94.09 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 94.05 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.85 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.72 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 91.32 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 88.58 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 86.09 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 85.22 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.98 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 81.99 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 81.32 |
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=5.6e-36 Score=253.15 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=164.1
Q ss_pred CC--ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHH
Q 024003 1 ME--DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLL 78 (274)
Q Consensus 1 m~--~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~ 78 (274)
|. |+|+||+||||+||.+.+..|++.+++++ |++..+ .+. ++.++|.+....+. +.+.
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~-------~~~------~~~~~~~~~~~~~~-~~~~ 60 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKEL------GVPSPD-------AKT------IRGFMGPPLESSFA-TCLS 60 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHH------TCCCCC-------HHH------HHHTSSSCHHHHHH-TTSC
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHH------HHHhhhcchhhhcc-cccc
Confidence 55 89999999999999999999999999999 444321 245 77789988765431 2110
Q ss_pred hcccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--h
Q 024003 79 EMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--L 156 (274)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~ 156 (274)
. +...+....+...+. .......++|||+.++|+ +
T Consensus 61 -----------------~----------------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~ 97 (210)
T d2ah5a1 61 -----------------K----------------------DQISEAVQIYRSYYK----AKGIYEAQLFPQIIDLLEELS 97 (210)
T ss_dssp -----------------G----------------------GGHHHHHHHHHHHHH----HTGGGSCEECTTHHHHHHHHH
T ss_pred -----------------c----------------------hhhHHHHHHHHHHHH----hhhhhcccchhHHHHHHhhhh
Confidence 0 001112222333332 233446789999999999 6
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC--CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
.+++++|+||++...++.+|++ +|++.+|+.|++++. +|+|+++..+++++|++|++++|||||.+|+.+|++
T Consensus 98 ~~~~~~i~t~~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~---- 172 (210)
T d2ah5a1 98 SSYPLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE---- 172 (210)
T ss_dssp TTSCEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----
T ss_pred cccchhhcccccchhhhHHHHh-hcccccccccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHH----
Confidence 7789999999999999999996 999999999998653 499999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
+|+++|+|.||++..+++.+++ |+++++|+.++.+.|.
T Consensus 173 aGi~~i~v~~g~~~~~~l~~~~--pd~vi~~l~el~~~le 210 (210)
T d2ah5a1 173 TGIQKLAITWGFGEQADLLNYQ--PDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp HTCEEEEESSSSSCHHHHHTTC--CSEEESSTTHHHHHTC
T ss_pred cCCeEEEEcCCCCCHHHHHhCC--CCEEECCHHHHHHHhC
Confidence 9999999999999999988764 7799999999988763
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=3.4e-34 Score=242.95 Aligned_cols=214 Identities=19% Similarity=0.200 Sum_probs=162.5
Q ss_pred CC--ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHH
Q 024003 1 ME--DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLL 78 (274)
Q Consensus 1 m~--~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~ 78 (274)
|. |+|+|||||||+||.+.+..+++.+++++ |++... .+. ++.+.|........ +.+.
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~~-------~~~------~~~~~~~~~~~~~~-~~~~ 60 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDV------NLPQAS-------ENL------VMTWIGNGADVLSQ-RAVD 60 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHH------HHHHCSSCHHHHHH-HHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHC------CCCCCc-------HHH------HHHHhhhhhhhhhh-hhhh
Confidence 65 89999999999999999999999999999 444331 234 56677776654331 2221
Q ss_pred hcccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---
Q 024003 79 EMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--- 155 (274)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--- 155 (274)
.. ...+.. .+..... ...+......+........++|||+.++|.
T Consensus 61 ~~-------------------~~~~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~ 108 (224)
T d2hsza1 61 WA-------------------CKQAEK---------ELTEDEF----KYFKRQFGFYYGENLCNISRLYPNVKETLEALK 108 (224)
T ss_dssp HH-------------------HHHHTC---------CCCHHHH----HHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHH
T ss_pred hh-------------------hhhhhh---------hhhHHHH----HHHHHHHHHHHHHhhccccchHHHHHHHHHHHh
Confidence 10 000000 0111111 111222222222334556789999999999
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
++|++++|+||.+...++.+|++ +||..+|+.+++++ .||+|+++..++++++++|++++||||+.+|+++|++
T Consensus 109 ~~g~~~~i~tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~- 186 (224)
T d2hsza1 109 AQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS- 186 (224)
T ss_dssp HTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH-
T ss_pred ccCCcccccccccHHHHHHHHHh-cCchhhccccccccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHH-
Confidence 79999999999999999999996 99999999999865 3599999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+++|+|.|||++..++.+. .|++++.|+.+|.+.|
T Consensus 187 ---aG~~~i~v~~g~~~~~~l~~~--~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 187 ---AGCAVVGLTYGYNYNIPIAQS--KPDWIFDDFADILKIT 223 (224)
T ss_dssp ---HTCEEEEESSSCSTTCCGGGG--CCSEEESSGGGGGGGT
T ss_pred ---cCCeEEEEeCCCCCcchhhhc--CCCEEECCHHHHHHhh
Confidence 999999999999988888765 4669999999998765
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=6.5e-35 Score=246.96 Aligned_cols=199 Identities=15% Similarity=0.182 Sum_probs=151.6
Q ss_pred CC-ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~-~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|+ |+|+|||||||+||.+.+..|++.+++++ |++... ++ ++..++...+.. +.+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~--------~~------~~~~~~~~~~~~-----~~~ 55 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATY------GKPFSP--------AQ------AQKTFPMAAEQA-----MTE 55 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTT------TCCCCH--------HH------HHHHTTSCHHHH-----HHH
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHc------CCCCCH--------HH------HHHHhcchhhhh-----hhc
Confidence 78 99999999999999999999999999998 444321 12 222333333222 211
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hC
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LA 157 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~ 157 (274)
. +.. ....++....+.+.+.++ ...+++|||+.++|+ ++
T Consensus 56 ~------------~~~----------------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~L~~l~~ 96 (207)
T d2hdoa1 56 L------------GIA----------------------ASEFDHFQAQYEDVMASH-----YDQIELYPGITSLFEQLPS 96 (207)
T ss_dssp T------------TCC----------------------GGGHHHHHHHHHHHHTTC-----GGGCEECTTHHHHHHHSCT
T ss_pred c------------ccc----------------------hhhHHHHHHHhhhhhccc-----ccccccccchhhhhhhhcc
Confidence 0 100 011111122233333222 335789999999999 67
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
+++++|+||++...++.+|++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+|||||.+|+++|++
T Consensus 97 ~~~~~ivT~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~--- 172 (207)
T d2hdoa1 97 ELRLGIVTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQA--- 172 (207)
T ss_dssp TSEEEEECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH---
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHH---
Confidence 899999999999999999996 99999999999864 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+|+.+|+|.||+.+..++.+ +++.+.++.|+.+.
T Consensus 173 -aG~~~i~v~~g~~~~~~~~~----~~~~i~~l~dll~l 206 (207)
T d2hdoa1 173 -ANVDFGLAVWGMDPNADHQK----VAHRFQKPLDILEL 206 (207)
T ss_dssp -HTCEEEEEGGGCCTTGGGSC----CSEEESSGGGGGGG
T ss_pred -cCCeEEEEecCCCChhHhhh----cCcEeCCHHHHHhh
Confidence 99999999999998776543 56889999988653
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.98 E-value=1.5e-32 Score=231.45 Aligned_cols=193 Identities=17% Similarity=0.171 Sum_probs=145.0
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhccccccc-ccccchHHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRP-VVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~-~ig~G~~~l~~~~~l~~~ 80 (274)
+++++|||||||+||.+.+..+++.+++++ |++... ++ ++. +.+.+...++ .+.+..
T Consensus 1 ~~a~iFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~--------~~------~~~~~~~~~~~~~~-~~~~~~- 58 (204)
T d2go7a1 1 KTAFIWDLDGTLLDSYEAILSGIEETFAQF------SIPYDK--------EK------VREFIFKYSVQDLL-VRVAED- 58 (204)
T ss_dssp CCEEEECTBTTTEECHHHHHHHHHHHHHHH------TCCCCH--------HH------HHHHHHHSCHHHHH-HHHHHH-
T ss_pred CEEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCCH--------HH------HHHhhccccccccc-ccccch-
Confidence 479999999999999999999999999999 454321 12 222 3344444433 122211
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
.+...+ .+..+...+.. .......+||||.++|+ ++
T Consensus 59 ---------------------------------~~~~~~----~~~~~~~~~~~----~~~~~~~~~pgv~~~L~~L~~~ 97 (204)
T d2go7a1 59 ---------------------------------RNLDVE----VLNQVRAQSLA----EKNAQVVLMPGAREVLAWADES 97 (204)
T ss_dssp ---------------------------------HTCCHH----HHHHHHHHHHT----TCGGGCEECTTHHHHHHHHHHT
T ss_pred ---------------------------------hhhhHH----HHHHHHHHHHH----hhcccCcccchHHhhhhccccc
Confidence 011111 12223333322 23445789999999999 79
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||+++. +..+|++ +|+..||+.|+|++ .||+|+++..++++++++|++|+||||+.+|+++|++
T Consensus 98 g~~~~v~Sn~~~~-~~~~l~~-~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~--- 172 (204)
T d2go7a1 98 GIQQFIYTHKGNN-AFTILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQN--- 172 (204)
T ss_dssp TCEEEEECSSCTH-HHHHHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH---
T ss_pred ccchhhhcccchh-hhhhhhh-cccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHH---
Confidence 9999999999875 5678996 99999999999865 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||++|+|.||.. .++..+.++.++.+.+
T Consensus 173 -~G~~~i~v~~~~~----------~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 173 -SGIQSINFLESTY----------EGNHRIQALADISRIF 201 (204)
T ss_dssp -HTCEEEESSCCSC----------TTEEECSSTTHHHHHT
T ss_pred -cCCeEEEEcCCCC----------CcCeecCCHHHHHHHh
Confidence 8999999999953 2557788888887655
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.98 E-value=1.4e-32 Score=239.57 Aligned_cols=217 Identities=14% Similarity=0.094 Sum_probs=152.3
Q ss_pred ceEEEecCcccccCHHH-HHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~d-i~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
|+|+|||||||+|+-.. ...+.+.+++++ |++.. .++ ++.+.|..-...+ +.+.+.
T Consensus 3 kaviFD~dGTL~d~~~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~- 59 (257)
T d1swva_ 3 EAVIFAWAGTTVDYGCFAPLEVFMEIFHKR------GVAIT--------AEE------ARKPMGLLKIDHV--RALTEM- 59 (257)
T ss_dssp CEEEECSBTTTBSTTCCTTHHHHHHHHHTT------TCCCC--------HHH------HHTTTTSCHHHHH--HHHHHS-
T ss_pred EEEEEcCCCCeEeCcchHHHHHHHHHHHHc------CCCCC--------HHH------HHHHhCCcHHHHH--HHHhhh-
Confidence 89999999999998553 256778888888 44321 234 5556654433222 222210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
..+...|.. +... .............+.+.|.+. +....++|||+.++|+ ++|
T Consensus 60 ---------------~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~Lk~~g 115 (257)
T d1swva_ 60 ---------------PRIASEWNR----VFRQ-LPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLRERG 115 (257)
T ss_dssp ---------------HHHHHHHHH----HHSS-CCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHHHTT
T ss_pred ---------------hhhhHHHHH----Hhcc-cCCHHHHHHHHHHHHHHHHHH----hhccCccCCcHHHHHHHHHhcc
Confidence 001111111 0000 012333344444444544443 3345689999999999 799
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHHhhccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~~ 232 (274)
++++|+||.++..++.+|++ +|+..+| |.+++++ .||+|+++.++++++|+.| ++|+|||||.+||.+|++
T Consensus 116 ~~i~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~-- 192 (257)
T d1swva_ 116 IKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRN-- 192 (257)
T ss_dssp CEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHH--
T ss_pred cceeecCCCchhhHHHHHHH-HhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHH--
Confidence 99999999999999999996 9999877 7777754 3699999999999999964 899999999999999998
Q ss_pred ccCCCcEEEEeCCCCC----hHH-------------------HHhcCCCCCceeechhHHHhhc
Q 024003 233 ELDGWNLYLVDWGYNT----PKE-------------------RAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~----~~~-------------------l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||.+|||.||++. .++ +..++ |+++++++.+|.+.|
T Consensus 193 --aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--ad~vi~~l~eL~~ii 252 (257)
T d1swva_ 193 --AGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENG--AHFTIETMQELESVM 252 (257)
T ss_dssp --TTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT--CSEEESSGGGHHHHH
T ss_pred --CCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCC--CCEEECCHHHHHHHH
Confidence 99999999999862 332 33333 779999999998765
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1e-31 Score=227.91 Aligned_cols=202 Identities=16% Similarity=0.121 Sum_probs=152.3
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.+++||||||||+||.+....+.+.+++++ |++.. .... ++.+.|......+ .......
T Consensus 3 i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~------g~~~~-------~~~~------~~~~~~~~~~~~~-~~~~~~~- 61 (218)
T d1te2a_ 3 ILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RRNE------LPDTLGLRIDMVV-DLWYARQ- 61 (218)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHT------TCCGG-------GGGG------SCCCTTCCHHHHH-HHHHHHS-
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC-------HHHH------HHHHhCCCccchh-hhhhhcc-
Confidence 389999999999999999999999999999 44321 1234 6778887776543 2222111
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
..... .. .+......+++.+.+. ....+|||+.++|+ ++|
T Consensus 62 -----------~~~~~-------------------~~---~~~~~~~~~~~~~~~~----~~~~~~pg~~~~l~~L~~~g 104 (218)
T d1te2a_ 62 -----------PWNGP-------------------SR---QEVVERVIARAISLVE----ETRPLLPGVREAVALCKEQG 104 (218)
T ss_dssp -----------CCSSS-------------------CH---HHHHHHHHHHHHHHHH----HHCCBCTTHHHHHHHHHHTT
T ss_pred -----------cccch-------------------hH---HHHHHHHHHHHHHhhh----ccccccchHHHHHHHhhhcc
Confidence 00000 00 1111222222222221 23578999999999 799
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||.++..++.+++. +|+..+|+.+++++ .||+|+++..+++++|++|++++||||+..|+.+|++
T Consensus 105 ~~~~i~T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~---- 179 (218)
T d1te2a_ 105 LLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA---- 179 (218)
T ss_dssp CEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----
T ss_pred cccccccccccccccccccc-ccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHH----
Confidence 99999999999999999996 99999999999975 3599999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
+|+++|+|.+++...+.. .. .|+.++.++.+|
T Consensus 180 ~G~~~i~v~~~~~~~~~~-~~--~a~~~i~~l~el 211 (218)
T d1te2a_ 180 ARMRSIVVPAPEAQNDPR-FV--LANVKLSSLTEL 211 (218)
T ss_dssp TTCEEEECCCTTTTTCGG-GG--GSSEECSCGGGC
T ss_pred cCCEEEEECCCCCccchh-hc--CCCEEECChhhC
Confidence 999999999998765433 23 456899999987
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=1e-31 Score=230.10 Aligned_cols=124 Identities=14% Similarity=0.017 Sum_probs=109.0
Q ss_pred CCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----CCcHHHHHHHHhhC---CCC
Q 024003 143 ANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKP---EHQ 211 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----~pkp~~l~~~l~~l---~~~ 211 (274)
..++|||+.++|+ ++| ++++|+||+++..+...|++ +||..||+.+++++. +|+|.+....+..+ +++
T Consensus 89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~ 167 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYS 167 (228)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCC
T ss_pred CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhh-hcccccccccccccccccccchhHHHHHHhhhhcccCCC
Confidence 3589999999998 566 89999999999999999996 999999999998762 38888766655554 789
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|++|+||||+.+|+.+|++ |||++|+|.||+.+.+++..+ .|++++.++.+|.+.|
T Consensus 168 p~~~l~VGD~~~Di~aA~~----aG~~~i~v~~g~~~~~~l~~~--~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 168 PSQIVIIGDTEHDIRCARE----LDARSIAVATGNFTMEELARH--KPGTLFKNFAETDEVL 223 (228)
T ss_dssp GGGEEEEESSHHHHHHHHT----TTCEEEEECCSSSCHHHHHTT--CCSEEESCSCCHHHHH
T ss_pred hhHheeecCChHHHHHHHH----cCCEEEEEcCCCCCHHHHhhC--CCCEEECCHHHHHHHH
Confidence 9999999999999999998 999999999999999988866 4679999999998765
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.97 E-value=2.9e-30 Score=219.46 Aligned_cols=205 Identities=16% Similarity=0.128 Sum_probs=150.9
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.|+|||||||||+||.+-...+++.+++++ |++... + +. ...+.|.....++ .+.+...
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~------g~~~~~-----~--~~------~~~~~g~~~~~~~-~~~~~~~- 60 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEA------GYPISV-----E--EM------GERFAGMTWKNIL-LQVESEA- 60 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCCH-----H--HH------HHHHTTCCHHHHH-HHHHHHH-
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCCH-----H--HH------HHHHhhhcccccc-ccccccc-
Confidence 389999999999999999999999999999 444321 1 11 2335555555443 2322211
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHHhCCCcE
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRI 161 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~~~g~~l 161 (274)
+... +. +.+..+...|.... .....++||+.++|++.+.+.
T Consensus 61 -----------~~~~--------------------~~----~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~l~~~~ 101 (222)
T d2fdra1 61 -----------SIPL--------------------SA----SLLDKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPR 101 (222)
T ss_dssp -----------CCCC--------------------CT----HHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCE
T ss_pred -----------cccc--------------------cc----cchhHHHHHHHHHh----hhccchhhhHHHHhhhccccc
Confidence 1000 00 11122223332222 224689999999999777889
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEec-CC------CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYG-LG------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g-~~------~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
+|+||.....++.+|++ +|+..+|+.++. .+ .||+|+++.++++++|++|++|+||||+..|+.+|++
T Consensus 102 ~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~---- 176 (222)
T d2fdra1 102 CICSNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA---- 176 (222)
T ss_dssp EEEESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----
T ss_pred eeeeecchhhhhhhhcc-cccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHH----
Confidence 99999999999999996 999999986543 22 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCCh----HHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTP----KERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~----~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||++|+|+||+.+. +++.+++ |++++.|+++|...|
T Consensus 177 aG~~~i~v~~~~~~~~~~~~~l~~~~--ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 177 AGMRVIGFTGASHTYPSHADRLTDAG--AETVISRMQDLPAVI 217 (222)
T ss_dssp TTCEEEEECCSTTCCTTHHHHHHHHT--CSEEESCGGGHHHHH
T ss_pred cCCEEEEEccCCCCCcchHHHHHhCC--CCEEECCHHHHHHHH
Confidence 999999999998653 4455555 669999999997765
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=3.5e-30 Score=218.79 Aligned_cols=207 Identities=16% Similarity=0.155 Sum_probs=147.7
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.|+|+||+||||+||.+.+..+.+.+++.+ |++... ... .+.+.|.+....+ +.+.+.
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~-------~~~------~~~~~~~~~~~~~--~~~~~~ 59 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEI------GINGVD-------RQF------NEQLKGVSREDSL--QKILDL 59 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHT------TCCCCC-------HHH------HTTTTTCCHHHHH--HHHHTT
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHc------CCCCCh-------HHH------HHHHhhccchhhh--hhcccc
Confidence 8999999999999999999999999999998 343321 112 3445566655433 222111
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. +. ..+.+...+....+.+.|.+.... ....++|||+.++|+ ++
T Consensus 60 ~-----------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~l~~~ 106 (221)
T d1o08a_ 60 A-----------DK--------------------KVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSN 106 (221)
T ss_dssp S-----------SS--------------------CCCHHHHHHHHHHHHHHHHHHTTT--CCGGGBCTTHHHHHHHHHHT
T ss_pred c-----------cc--------------------cchhhhhhhHHHHHHhhccccccc--cccccccCCceecccccccc
Confidence 0 00 012233333344444444443322 224679999999999 89
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||... ....++. +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+++|++
T Consensus 107 ~~~i~i~s~~~~--~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~--- 180 (221)
T d1o08a_ 107 KIKIALASASKN--GPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD--- 180 (221)
T ss_dssp TCEEEECCSCTT--HHHHHHH-TTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH---
T ss_pred ccceEEEeecch--hhHHHHh-hccccccccccccccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHH---
Confidence 999999999754 5788996 99999999999865 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
+||++|+|.||+...+... ..|+....+++.|.+
T Consensus 181 -aG~~~i~v~~~~~~~~~~~---~~~~~~~~~~~~l~e 214 (221)
T d1o08a_ 181 -SGALPIGVGRPEDLGDDIV---IVPDTSHYTLEFLKE 214 (221)
T ss_dssp -HTCEEEEESCHHHHCSSSE---EESSGGGCCHHHHHH
T ss_pred -cCCEEEEECChhhcccccE---EcCCcccCCHHHHHH
Confidence 9999999988753222111 235555556666654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=5.2e-30 Score=214.23 Aligned_cols=175 Identities=15% Similarity=0.217 Sum_probs=130.7
Q ss_pred CC-ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~-~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|+ |+|+||+||||+||.+.+..+++.+++.+ |++.. ... ++..+|.+....+ .+.. .
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~~~~~~~~~-~~~~-~ 58 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALY------GITQD--------HDS------VYQALKVSTPFAI-ETFA-P 58 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHH------HHHHHHHCHHHHH-HHHC-T
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHc------CCCcc--------HHH------HHhhhhccchhhh-hhhh-H
Confidence 77 99999999999999999999999999988 44331 123 4445555443322 1110 0
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
..+ .....+++.+... .....+||||.++|+ +
T Consensus 59 ---------------~~~-------------------------~~~~~~~~~~~~~-----~~~~~~~~gv~~~l~~l~~ 93 (187)
T d2fi1a1 59 ---------------NLE-------------------------NFLEKYKENEARE-----LEHPILFEGVSDLLEDISN 93 (187)
T ss_dssp ---------------TCT-------------------------THHHHHHHHHHHH-----TTSCCBCTTHHHHHHHHHH
T ss_pred ---------------HHH-------------------------HHHHHHHHHHHHH-----hhcCcccchhHHHHHHHHh
Confidence 000 0112233333222 235789999999998 8
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
+|++++|+||+++... .+|++ +++..+|+.++|++ .||+|+++..+++++++ ++++|||||..|+++|++
T Consensus 94 ~g~~~~i~Sn~~~~~~-~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~-- 167 (187)
T d2fi1a1 94 QGGRHFLVSHRNDQVL-EILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQA-- 167 (187)
T ss_dssp TTCEEEEECSSCTHHH-HHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHH--
T ss_pred hhccccccccCccchh-hhhhh-hccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHH--
Confidence 9999999999988766 47885 99999999999875 36999999999999986 459999999999999998
Q ss_pred ccCCCcEEEEeCCCCChH
Q 024003 233 ELDGWNLYLVDWGYNTPK 250 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~ 250 (274)
+|+++|+|++|++.++
T Consensus 168 --aG~~~i~v~~~~~~~~ 183 (187)
T d2fi1a1 168 --AGLDTHLFTSIVNLRQ 183 (187)
T ss_dssp --TTCEEEECSCHHHHHH
T ss_pred --cCCEEEEECCCCChHh
Confidence 9999999998875543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.96 E-value=6.1e-29 Score=213.14 Aligned_cols=121 Identities=17% Similarity=0.183 Sum_probs=107.9
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+|||+.++|+ ++|++++|+||.+....+.++++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~ 177 (230)
T d1x42a1 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177 (230)
T ss_dssp CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CcccccHHHHHHHhhccCceeeeeccccccchhhhcc-cccccccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence 579999999999 78899999999999999999996 99999999999864 469999999999999999999999
Q ss_pred EcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 218 VEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 218 VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||+. +|+++|++ +|+++|+|.|+....+.. ..|++++.|+.+|.+.|
T Consensus 178 vgD~~~~Di~~A~~----~G~~~v~v~~~~~~~~~~----~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 178 VGDNPVKDCGGSKN----LGMTSILLDRKGEKREFW----DKCDFIVSDLREVIKIV 226 (230)
T ss_dssp EESCTTTTHHHHHT----TTCEEEEECTTSCCGGGG----GGSSEEESSTTHHHHHH
T ss_pred eecCcHhHHHHHHH----cCCEEEEECCCCCCcccc----cCCCEEECCHHHHHHHH
Confidence 99984 79999998 999999999997655422 24789999999997665
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=1.1e-26 Score=199.03 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=107.6
Q ss_pred CCCCCccHHHHHH-hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 143 ANRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~-~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
...+|||+.++|+ -++++++|+||.+...+..++++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-cccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 3689999999999 68999999999999999999996 99999999999865 379999999999999999999999
Q ss_pred EcCChhHHHHhhccCccCCCcEEEEeCCCC------------ChHH--------HHhcCCCCCceeechhHHHhhc
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYLVDWGYN------------TPKE--------RAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~------------~~~~--------l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||+.+||.+|++ |||++|+|..+-. .+.. .......|++++.++.+|.+.+
T Consensus 170 VgD~~~di~~A~~----aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv 241 (245)
T d1qq5a_ 170 VSSNGFDVGGAKN----FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (245)
T ss_dssp EESCHHHHHHHHH----HTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EeCCHHHHHHHHH----cCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHH
Confidence 9999999999998 9999999974311 1100 0222457999999999998765
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1.8e-25 Score=192.48 Aligned_cols=124 Identities=13% Similarity=0.076 Sum_probs=106.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
...+|||+.++|+ ++|++++|+||.+....+..+++ +|+..||+.+++++ .||+|+++..+++++|++|++|+
T Consensus 107 ~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l 185 (247)
T d2gfha1 107 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185 (247)
T ss_dssp TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-ccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcc
Confidence 4679999999999 78999999999999999999996 99999999998764 36999999999999999999999
Q ss_pred EEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+. +|+.+|++ +|++++++.-+.+... ......|++++.++.+|.+.|
T Consensus 186 ~iGD~~~~Di~~A~~----~G~~~~~~~~~~~~~~--~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 186 MVGDTLETDIQGGLN----AGLKATVWINKSGRVP--LTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp EEESCTTTHHHHHHH----TTCSEEEEECTTCCCC--SSCCCCCSEEESSGGGHHHHH
T ss_pred eeccChHhHHHHHHH----cCCeEEEEECCCCCCc--ccccCCCCEEECCHHHHHHHH
Confidence 999996 79999998 8999776654544332 224557889999999998766
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1e-26 Score=191.30 Aligned_cols=105 Identities=16% Similarity=0.134 Sum_probs=92.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch-HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~-~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
..++||||.++|+ ++|++++|+||+++ ..++.+++. +++..+|+.+.+. .+|+|+++.++++++|++|++|+||
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~l~i 121 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREIY-PGSKVTHFERLHHKTGVPFSQMVFF 121 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEES-SSCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeecc-cCCChHHHHHHHHHhCCChHHEEEE
Confidence 3589999999999 89999999998876 567778885 9999999988764 4699999999999999999999999
Q ss_pred cCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 219 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 219 GDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
||+.+|+++|++ +||++|+|.||| +.+++++
T Consensus 122 gD~~~di~aA~~----aG~~~i~v~~G~-~~~~~~~ 152 (164)
T d1u7pa_ 122 DDENRNIIDVGR----LGVTCIHIRDGM-SLQTLTQ 152 (164)
T ss_dssp ESCHHHHHHHHT----TTCEEEECSSCC-CHHHHHH
T ss_pred cCCHHHHHHHHH----cCCEEEEECCCC-ChHHHHH
Confidence 999999999998 999999999999 4555543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.93 E-value=8.1e-26 Score=190.88 Aligned_cols=122 Identities=14% Similarity=0.170 Sum_probs=109.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...+||++.++|+ ++|++++|+||......+.++++ +++..+|+.+++++ .||+|+++..+++++|++|++|
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~ 169 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 169 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence 4679999999999 79999999999999999999996 99999999999875 3699999999999999999999
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+||||+..|+++|++ ||+.+|+|.++....++ ....|++++.|+.+|.+.
T Consensus 170 l~VgD~~~Di~~A~~----aG~~~v~v~r~~~~~~~---~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 170 LFVASNAWDATGARY----FGFPTCWINRTGNVFEE---MGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp EEEESCHHHHHHHHH----HTCCEEEECTTCCCCCS---SSCCCSEEESSHHHHHTT
T ss_pred EEEecChHhHHHHHH----cCCEEEEEcCCCCCccc---ccCCCCEEECCHHHHHhh
Confidence 999999999999998 99999999877655444 355689999999998764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.4e-25 Score=190.76 Aligned_cols=122 Identities=11% Similarity=0.088 Sum_probs=100.5
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec-CC----CCCcHHHHHHHHhhCCCCC
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-LG----TGPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g-~~----~~pkp~~l~~~l~~l~~~~ 212 (274)
.....+|||+.++|. ++|++++|+||.+....+.+++. .|+..+|+.+.. .+ .||+|++++.+++++|++|
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p 201 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST 201 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence 345689999999999 79999999999999999999995 999888775432 12 4799999999999999999
Q ss_pred CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 213 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 213 ~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
++|+||||+.+|+.+|++ |||++|+|.++.+......... |..++.|+++|
T Consensus 202 ~~~l~vgD~~~dv~aA~~----aG~~ti~v~r~g~~~~~~~~~~--~~~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVTREASAAEE----ADVHVAVVVRPGNAGLTDDEKT--YYSLITSFSEL 252 (253)
T ss_dssp GGEEEEESCHHHHHHHHH----TTCEEEEECCTTCCCCCHHHHH--HSCEESSGGGC
T ss_pred CcEEEEeCCHHHHHHHHH----cCCEEEEEeCCCCCCCchhhcC--CCcEECChHHh
Confidence 999999999999999998 9999999998655433233222 34677777764
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=8.1e-26 Score=190.85 Aligned_cols=109 Identities=16% Similarity=0.056 Sum_probs=97.0
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCC
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTn----K~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~ 210 (274)
...++|||+.++|. ++|++++|+|| ......+..+.+ +|+..|||.+++++ .||+|++++.+++++++
T Consensus 94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v 172 (222)
T d1cr6a1 94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKA 172 (222)
T ss_dssp HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTS
T ss_pred hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhccCCCCChHHHHHHHHHhCC
Confidence 34689999999999 89999999997 455566777775 89999999999864 46999999999999999
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
+|++|+||||+..|+++|++ +||++|+|.+|....++|++.
T Consensus 173 ~p~~~l~IgD~~~Di~~A~~----aG~~ti~V~~~~~~~~el~~~ 213 (222)
T d1cr6a1 173 KPNEVVFLDDFGSNLKPARD----MGMVTILVHNTASALRELEKV 213 (222)
T ss_dssp CTTSEEEEESSSTTTHHHHH----HTCEEEECCSSSHHHHHHHHH
T ss_pred CcceEEEEECCHHHHHHHHH----cCCEEEEECCcchHHHHHHHh
Confidence 99999999999999999998 999999999998888888765
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.8e-24 Score=181.01 Aligned_cols=108 Identities=17% Similarity=0.032 Sum_probs=92.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH----HHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSR----FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~----~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~ 212 (274)
..++||+.++|. ++|++++|+||.... ..+..... .++..+||.|++++ .||+|+++.++++++|++|
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p 176 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP 176 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhhccEEEeccccccchhHHHHHHHHhhhcccCc
Confidence 579999999999 799999999986544 33444443 67888999999864 4799999999999999999
Q ss_pred CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcC
Q 024003 213 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 256 (274)
Q Consensus 213 ~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~ 256 (274)
++++||||+..|+++|++ +|+++|+|.+|....+++++..
T Consensus 177 ~e~l~VgD~~~Di~~A~~----~G~~ti~v~~~~~~~~~l~~~~ 216 (225)
T d1zd3a1 177 SEVVFLDDIGANLKPARD----LGMVTILVQDTDTALKELEKVT 216 (225)
T ss_dssp GGEEEEESCHHHHHHHHH----TTCEEEECSSHHHHHHHHHHHH
T ss_pred cceeEEecCHHHHHHHHH----cCCEEEEECCcchhHHHHHHcc
Confidence 999999999999999998 9999999999887777777653
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=3.7e-22 Score=166.68 Aligned_cols=122 Identities=19% Similarity=0.211 Sum_probs=96.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecC-------------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------- 192 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~------------- 192 (274)
.++||||.++|+ ++|++++|+||++. ......+.. .|+.. ....++.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~cp~~p~~~~~~~~~~ 103 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVDL-DGIYYCPHHPQGSVEEFRQV 103 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCCC-SEEEEECCBTTCSSGGGBSC
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhh-hcccc-cceeeccccccccccccccc
Confidence 479999999999 79999999999984 233344443 55532 2333331
Q ss_pred --CCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 193 --GTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 193 --~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
..||+|.+++++++++++++++++|||||.+||++|++ ||+++ ++|.+|+...+..+. . |++++.++.++
T Consensus 104 ~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~----Ag~~~~~lv~~g~~~~~~~~~-~--ad~v~~~l~dl 176 (182)
T d2gmwa1 104 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA----ANVGTKVLVRTGKPITPEAEN-A--ADWVLNSLADL 176 (182)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH----TTCSEEEEESSSSCCCHHHHH-H--CSEEESCGGGH
T ss_pred ccccCCccccccchhhhcccccccccccCCCHHHHHHHHH----hCCCcEEEECCCCCCCccccc-C--CCEEECCHHHH
Confidence 13799999999999999999999999999999999998 89975 889999877665543 2 66999999999
Q ss_pred HhhcC
Q 024003 270 CTKLK 274 (274)
Q Consensus 270 ~~~~~ 274 (274)
.+.||
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88764
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=7e-22 Score=165.86 Aligned_cols=118 Identities=13% Similarity=0.156 Sum_probs=93.0
Q ss_pred CCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHH-----------HHHhCCCCCCceEecCC---CCCcHHHHHHHHhh
Q 024003 142 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL-----------RELAGVTITPDRLYGLG---TGPKVNVLKQLQKK 207 (274)
Q Consensus 142 ~~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL-----------~~~~gl~~~f~~v~g~~---~~pkp~~l~~~l~~ 207 (274)
....+|+++.+++. ++.++++.|++.......+. +. +||..||+.|++++ .||+|+++..++++
T Consensus 94 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~ 171 (225)
T d2g80a1 94 IKAPVYADAIDFIK-RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSYIDGYFDINTSGKKTETQSYANILRD 171 (225)
T ss_dssp CCBCCCHHHHHHHH-HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHh-hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccccceeeeccccCCCCChhHhHHHHHh
Confidence 34679999999885 55678999999887665554 42 57888999999865 57999999999999
Q ss_pred CCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 208 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 208 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
+|++|++|+||||+..|+.+|++ +||++|+|....+.+ . ....|..++.++++|
T Consensus 172 lg~~p~e~l~VgD~~~Dv~~A~~----aG~~ti~v~r~g~~~--~--~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 172 IGAKASEVLFLSDNPLELDAAAG----VGIATGLASRPGNAP--V--PDGQKYQVYKNFETL 225 (225)
T ss_dssp HTCCGGGEEEEESCHHHHHHHHT----TTCEEEEECCTTSCC--C--CSSCCSCEESCSTTC
T ss_pred cccCchhceeecCCHHHHHHHHH----cCCEEEEEeCCCCCC--C--cccCCCCccCChhhC
Confidence 99999999999999999999998 999999997643322 1 223344566666654
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.6e-22 Score=165.06 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=86.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+++|+.+++. .+|++++|+||.+...+...+..+.|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 579999999988 89999999999988877777775237888999999764 46999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
|||||.+|+++|++ +|+.+|+|+=.
T Consensus 163 ~vgDs~~di~~A~~----aG~~ti~v~~~ 187 (197)
T d2b0ca1 163 FFDDNADNIEGANQ----LGITSILVKDK 187 (197)
T ss_dssp EEESCHHHHHHHHT----TTCEEEECCST
T ss_pred EEeCCHHHHHHHHH----cCCEEEEECCC
Confidence 99999999999998 99999998633
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.82 E-value=6.7e-21 Score=163.12 Aligned_cols=99 Identities=24% Similarity=0.210 Sum_probs=80.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecCC------------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG------------ 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~~------------ 193 (274)
.++||||.|+|+ ++|++++||||++. ......|+. .|+ +++.+++..
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~-~g~--~~~~~~~~~~~~~~~~~~~~~ 123 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGV--FVDMVLACAYHEAGVGPLAIP 123 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTC--CCSEEEEECCCTTCCSTTCCS
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhh-ccc--ccceEEEeccccccccccccc
Confidence 468999999999 79999999999762 223344443 454 344443321
Q ss_pred ----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 194 ----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 194 ----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
.||+|.++.++++++++++++|+||||+.+||++|++ |||++++|.+|++..
T Consensus 124 ~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~----AGi~~i~v~~g~~~~ 179 (209)
T d2o2xa1 124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR----AGLAQGWLVDGEAAV 179 (209)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH----TTCSEEEEETCCCEE
T ss_pred ccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHH----CCCcEEEEeCCCCcc
Confidence 2799999999999999999999999999999999998 999999999999754
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=2e-21 Score=164.89 Aligned_cols=120 Identities=8% Similarity=0.082 Sum_probs=91.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCce---EecCC--------------CCCcHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR---LYGLG--------------TGPKVNVLKQ 203 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~---v~g~~--------------~~pkp~~l~~ 203 (274)
.+++||+.++|+ ++|++++|+||+....++.+|++ +|+..+|.. .+..+ .+++|..+..
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 152 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS 152 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence 579999999999 89999999999999999999996 888766522 11111 2378889999
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++++++.++++++|||||.+|+.+|++ ||+.+ ++.++ .+.+...+ .|...+.++.++.+.|
T Consensus 153 ~~~~~~~~~~~~i~iGDs~~Dl~~a~~----A~~~~-a~~~~---~~~~~~~~-~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 153 VIHELSEPNQYIIMIGDSVTDVEAAKL----SDLCF-ARDYL---LNECREQN-LNHLPYQDFYEIRKEI 213 (226)
T ss_dssp HHHHHCCTTCEEEEEECCGGGHHHHHT----CSEEE-ECHHH---HHHHHHTT-CCEECCSSHHHHHHHH
T ss_pred HHHHhcCCCceEEEEeCchhhHHHHHH----CCEEE-Eecch---HHHHHHcC-CCeeecCCHHHHHHHH
Confidence 999999999999999999999999997 78633 33332 23444433 3556678888775543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=3.8e-21 Score=158.31 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=77.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHHhCCCC---CCceEecCC----CCCcH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTI---TPDRLYGLG----TGPKV 198 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~---------------~~~~~~iL~~~~gl~~---~f~~v~g~~----~~pkp 198 (274)
..+||||.++|+ ++|++++|+||++ .......|+. .|+.. ||+..++.+ .||+|
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~i~~~~~~~~~~~~~~KP~p 107 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQFDEVLICPHLPADECDCRKPKV 107 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH-TTCCEEEEEEECCCGGGCCSSSTTSS
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc-cccccceeeecccccccccccccccc
Confidence 579999999999 7999999999986 2345566775 67642 222222322 37999
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 199 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 199 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
.++++++++++++|++++||||+.+|+++|++ |||++|++.-+..+-
T Consensus 108 ~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~----aG~~~i~i~~~~~~~ 154 (161)
T d2fpwa1 108 KLVERYLAEQAMDRANSYVIGDRATDIQLAEN----MGINGLRYDRETLNW 154 (161)
T ss_dssp GGGGGGC----CCGGGCEEEESSHHHHHHHHH----HTSEEEECBTTTBCH
T ss_pred HHHHHHHHhcCCChhcEEEECCCHHHHHHHHH----cCCeEEEECCCCCCH
Confidence 99999999999999999999999999999998 999999997665443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.6e-21 Score=169.70 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=84.0
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhc
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIK 230 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~ 230 (274)
.++....++|++....-...++. ..+..+|+.+.|.+ .||+|+++.++++++|++|++|+||||+. +||++|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~ 212 (250)
T d2c4na1 134 VANGARFIATNPDTHGRGFYPAC-GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ 212 (250)
T ss_dssp HHTTCEEEESCCCSBSSTTCBCH-HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred HhccccccccccccccCceeecC-cchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHH
Confidence 34556778898764321111110 01112334444443 37999999999999999999999999996 59999998
Q ss_pred cCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 231 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|||++|+|.||+.++++++..+..|++++.|+.+|.
T Consensus 213 ----aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 213 ----AGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp ----TTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred ----CCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 999999999999999999988889999999999874
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.78 E-value=4.6e-19 Score=154.17 Aligned_cols=71 Identities=18% Similarity=0.291 Sum_probs=67.6
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChh-HHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+|+++..+++++|++|++|+||||+.. ||++|++ |||++|+|+||+.+++++...+..|++++.|+.||
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~----aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIK----NDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHH----TTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHH----CCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 89999999999999999999999999965 9999998 99999999999999988998888999999999886
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=7.8e-19 Score=152.74 Aligned_cols=76 Identities=24% Similarity=0.283 Sum_probs=72.1
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+|.++..+++++|++|++++||||+. +||.+|++ |||++|+|.||+.+.+++..++..|++++.|+.+|.+.|
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~----aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKN----AGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHH----HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHH----CCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 6999999999999999999999999995 69999998 999999999999999999999999999999999999887
Q ss_pred C
Q 024003 274 K 274 (274)
Q Consensus 274 ~ 274 (274)
+
T Consensus 261 ~ 261 (261)
T d1vjra_ 261 Q 261 (261)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.75 E-value=1.1e-18 Score=161.29 Aligned_cols=122 Identities=16% Similarity=-0.004 Sum_probs=103.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCce--EecC-C--------------CCCcHHHHHHH
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR--LYGL-G--------------TGPKVNVLKQL 204 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~--v~g~-~--------------~~pkp~~l~~~ 204 (274)
+|+|||.++|+ ++|++++|+||++...++.++++ +||..||+. ++++ + .||+|+++..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 47889999999 89999999999999999999996 999999864 3331 1 25999999988
Q ss_pred HhhC--------------CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh---HHHHhcCCCCCceeechh
Q 024003 205 QKKP--------------EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP---KERAEAASMPRIQLLQLS 267 (274)
Q Consensus 205 l~~l--------------~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~---~~l~~a~~~P~~~~~~~~ 267 (274)
+..+ +..|++|+||||+.+|+.+||+ ||+++|||.||++.. +++.+++|+ ++++|+.
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~----Ag~~~Igv~~G~~g~~~~~el~~~~AD--~ii~~~~ 367 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK----IGATFIGTLTGLKGKDAAGELEAHHAD--YVINHLG 367 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH----HTCEEEEESCBTTBGGGHHHHHHTTCS--EEESSGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHH----CCCCEEEEecCCCCcccHHHHHhCCCC--EEECCHH
Confidence 7544 5678899999999999999998 999999999999764 356666655 9999999
Q ss_pred HHHhhc
Q 024003 268 DFCTKL 273 (274)
Q Consensus 268 ~~~~~~ 273 (274)
++.+.|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 998765
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.73 E-value=3.2e-18 Score=148.43 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=68.1
Q ss_pred CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 194 TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 194 ~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
.||+|+++.++++++|++|++++||||+. +||++|++ |||++|+|.||+...+++......|+++++|+.+|.
T Consensus 179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~----aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQ----NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHH----HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHH----CCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 37999999999999999999999999996 59999998 999999999999988888888889999999999874
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.4e-17 Score=142.00 Aligned_cols=115 Identities=12% Similarity=0.256 Sum_probs=80.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC------ceEecCC----CC--------CcHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------DRLYGLG----TG--------PKVNVL 201 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f------~~v~g~~----~~--------pkp~~l 201 (274)
...++||+.++++ ++|++++|||++...+++.+++. +|++.+. .....+. .. .|.+.+
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v 158 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 158 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHH
Confidence 3579999999999 79999999999999999999996 9997431 1111111 11 245667
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
..++++ .++++|+|||||.+|+.+++. ||+ +|.||.+...+..... ++..+.|+.+|
T Consensus 159 ~~~~~~--~~~~~~~~vGDs~~Di~~~~~----ag~---~va~~~~~~~~~~~~~--ad~~i~~f~el 215 (217)
T d1nnla_ 159 KLLKEK--FHFKKIIMIGDGATDMEACPP----ADA---FIGFGGNVIRQQVKDN--AKWYITDFVEL 215 (217)
T ss_dssp HHHHHH--HCCSCEEEEESSHHHHTTTTT----SSE---EEEECSSCCCHHHHHH--CSEEESCGGGG
T ss_pred HHHHhc--cCccccEEEEeCHhhHHHHHh----CCc---eEEECCCHHHHHHHHh--CCCEeCCHHHh
Confidence 766554 457899999999999999997 785 4566765432222222 34677766654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.70 E-value=4.9e-18 Score=135.49 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=71.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHHhC------CCCCCceEecCCC---CCcHHHHHHHHhhC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELAG------VTITPDRLYGLGT---GPKVNVLKQLQKKP 208 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~---~iL~~~~g------l~~~f~~v~g~~~---~pkp~~l~~~l~~l 208 (274)
..+||||.++|+ ++|++++++||+++.+.+ .-|+. .+ ...+++....... .|++......+.++
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-HhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 478999999999 799999999999854332 22321 11 1234555554332 37777777788777
Q ss_pred CCCCCc-EEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 209 EHQGLR-LHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 209 ~~~~~~-~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
...+.+ ++||||+..|+++|++ +|++|++|+||
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~----~Gi~~~~V~~G 147 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRR----IGVECWQVASG 147 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHH----TTCCEEECSCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHH----CCCcEEEeCCC
Confidence 666665 4678999999999998 99999999999
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.69 E-value=1.5e-17 Score=137.30 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=94.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC--------------CCCcHHHHHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------------TGPKVNVLKQLQ 205 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~--------------~~pkp~~l~~~l 205 (274)
...+++|+.++++ .+|+.++++|++....+....++ .+...++......+ .++++..+..++
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence 3589999999999 79999999999999999999996 88877665554422 126788999999
Q ss_pred hhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHHhhcC
Q 024003 206 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCTKLK 274 (274)
Q Consensus 206 ~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~~~~~ 274 (274)
++++++++++++||||.+|+.+++. ||++ |+ + +..+++++ .++ +++.+ +.++.+.||
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~----ag~~-va--~--na~~~lk~-~Ad--~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKK----AGLK-IA--F--CAKPILKE-KAD--ICIEKRDLREILKYIK 210 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHH----CSEE-EE--E--SCCHHHHT-TCS--EEECSSCGGGGGGGCC
T ss_pred HHhcccccceEEecCCcChHHHHHH----CCCC-EE--E--CCCHHHHH-hCC--EEEcCCCHHHHHHHhC
Confidence 9999999999999999999999997 8865 33 3 34455654 344 88875 457776665
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.41 E-value=2e-12 Score=105.71 Aligned_cols=119 Identities=10% Similarity=0.070 Sum_probs=88.2
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec-C-C------CCCcHHHHHHHHhhCCCCC
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-L-G------TGPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g-~-~------~~pkp~~l~~~l~~l~~~~ 212 (274)
....+|+....+. ..+++.+++|............. +++..++....- . . ..+++......++.++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeecccccccccccchhhHHHHHHHhcccc
Confidence 3578889888887 78999999999999999999995 877654432221 1 1 1267777888899999999
Q ss_pred CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCce-eechhHHHhhc
Q 024003 213 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ-LLQLSDFCTKL 273 (274)
Q Consensus 213 ~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~-~~~~~~~~~~~ 273 (274)
+++++|||+.||+.+.+. || +||..+ ..+++.+.- |+++ ..+.+++.+.|
T Consensus 146 ~eviaiGDg~NDi~Ml~~----Ag---~gIAmn--a~~~v~~~~--~~~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 146 YRVIAAGDSYNDTTMLSE----AH---AGILFH--APENVIREF--PQFPAVHTYEDLKREF 196 (206)
T ss_dssp CEEEEEECSSTTHHHHHH----SS---EEEEES--CCHHHHHHC--TTSCEECSHHHHHHHH
T ss_pred cceEEecCCccCHHHHHh----CC---ccEEEC--CCHHHHHhC--CCceeecCHHHHHHHH
Confidence 999999999999999998 67 455555 334554432 4464 56788887543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.98 E-value=6.3e-10 Score=92.10 Aligned_cols=96 Identities=11% Similarity=-0.019 Sum_probs=65.3
Q ss_pred CCCcEEEEcC-CchHHHHHHHHHHhCCCCCCceEecCC-------CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHh
Q 024003 157 ASSRIYIVTS-NQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 157 ~g~~laIvTn-K~~~~~~~iL~~~~gl~~~f~~v~g~~-------~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 228 (274)
+...+.+... ...+..+.++++ ++... ....+.. ..+|+..+..+++++|++++++++|||+.||+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml 184 (230)
T d1wr8a_ 108 RRAGLVIMRETINVETVREIINE-LNLNL--VAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF 184 (230)
T ss_dssp CSSCEEECTTTSCHHHHHHHHHH-TTCSC--EEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHH
T ss_pred ceeeEEEecccccHHHHHHHHHH-hccce--EEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHH
Confidence 4444555443 345667888885 65542 2222321 12899999999999999999999999999999999
Q ss_pred hccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 229 IKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 229 ~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
+. ||+ +|..|..+ +++++. + +++..+.
T Consensus 185 ~~----ag~---~vav~na~-~~~k~~-A--~~v~~~~ 211 (230)
T d1wr8a_ 185 KV----VGY---KVAVAQAP-KILKEN-A--DYVTKKE 211 (230)
T ss_dssp HH----SSE---EEECTTSC-HHHHTT-C--SEECSSC
T ss_pred HH----CCe---EEEECCCC-HHHHHh-C--CEEECCC
Confidence 97 774 55667554 445543 3 3676553
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.84 E-value=1.5e-09 Score=90.86 Aligned_cols=60 Identities=7% Similarity=-0.148 Sum_probs=46.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
.|...+..+++++|++++++++||||.||+.+.+. +|+ +|..|-.. +++++. +++++.+.
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~----a~~---~vav~na~-~~~k~~---ad~v~~~~ 210 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL----PVR---KACPANAT-DNIKAV---SDFVSDYS 210 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS----SSE---EEECTTSC-HHHHHH---CSEECSCC
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHHHH----CCe---EEEECCCc-HHHHHh---CCEEECCC
Confidence 77899999999999999999999999999999997 663 44445334 455554 34776655
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.69 E-value=5.2e-08 Score=83.21 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=45.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
.|...+..++++++++++++++|||+.||+.+-+. +|.. |+| |-.+ +++++.. +++..+..
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~----~~~s-va~--~na~-~~~k~~A---~~i~~~~~ 250 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE----AGLR-VAM--ENAI-EKVKEAS---DIVTLTNN 250 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT----CSEE-EEC--TTSC-HHHHHHC---SEECCCTT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHh----CCcE-EEe--CCCC-HHHHHhC---CEEcCCCC
Confidence 78899999999999999999999999999999987 6642 444 5333 4555432 35555443
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.57 E-value=2.9e-08 Score=83.41 Aligned_cols=89 Identities=11% Similarity=0.016 Sum_probs=64.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHHhCCC--CCCceEecCCC--C-CcHHHHHHHHhhCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVT--ITPDRLYGLGT--G-PKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~---~~~~~iL~~~~gl~--~~f~~v~g~~~--~-pkp~~l~~~l~~l~~~ 211 (274)
...+.||+.++|+ ++|+++..|||..+ +.+.+.|.+.+|+. .....++..+. | ++...+ +++++
T Consensus 84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~I----k~y~I- 158 (209)
T d2b82a1 84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWL----QDKNI- 158 (209)
T ss_dssp GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHH----HHTTE-
T ss_pred ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHH----HHcCe-
Confidence 4678899999999 89999999999764 34445553227873 33445555432 3 454444 45676
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.+|+||...|+.+|++ ||+++|-|.
T Consensus 159 ---~l~~GD~l~Df~aA~e----agi~~iRi~ 183 (209)
T d2b82a1 159 ---RIFYGDSDNDITAARD----VGARGIRIL 183 (209)
T ss_dssp ---EEEEESSHHHHHHHHH----TTCEEEECC
T ss_pred ---EEEecCCHHHHhHHHH----cCCCceEee
Confidence 4999999999999998 899999873
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.51 E-value=7e-08 Score=80.34 Aligned_cols=88 Identities=23% Similarity=0.266 Sum_probs=68.7
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHh
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 206 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~------------~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~ 206 (274)
+||||.+.|+ ++|+.+.|+||-+. ...+.+++. ++.. +...++.. .||+|-++.++++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~-l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH-cCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 6899999999 79999999999642 224566775 6654 34444422 4699999999999
Q ss_pred hCC----CCCCcEEEEcCC-----------------hhHHHHhhccCccCCCcEE
Q 024003 207 KPE----HQGLRLHFVEDR-----------------LATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 207 ~l~----~~~~~~l~VGDs-----------------~~Di~aA~~~~~~Agv~~i 240 (274)
++. ++.++++||||. ..|++.|+| +|+++.
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N----~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN----VGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHH----HTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHH----CCCccc
Confidence 874 788999999994 499999998 888864
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.40 E-value=5.6e-07 Score=79.16 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=62.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC------------CC------CcHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------TG------PKVNVLK 202 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~------------~~------pkp~~l~ 202 (274)
..+-||+.++++ ++|++++|+|+--..+++.++++ +|+...-..|++-. .+ .|-..+.
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 578999999999 89999999999999999999997 88753211344311 01 2334444
Q ss_pred HHHhh--CCCCCCcEEEEcCChhHHHHhhc
Q 024003 203 QLQKK--PEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 203 ~~l~~--l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
..... ......++++||||.+|+.+|+.
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g 242 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQGDLRMADG 242 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred hhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence 43332 23356789999999999999985
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.34 E-value=9.8e-07 Score=75.08 Aligned_cols=60 Identities=17% Similarity=0.013 Sum_probs=45.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeech
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 266 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~ 266 (274)
.|-..+..+++.+|+++++++++||+.||+.+-+. ||. +|+|..| + +++++. + +++..+.
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~----a~~-svam~na--~-~~~k~~-A--~~v~~~~ 272 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEA----AGK-GVAMGNA--R-EDIKSI-A--DAVTLTN 272 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHH----SSE-EEECTTC--C-HHHHHH-C--SEECCCG
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHh----CCe-EEEeCCC--C-HHHHHh-C--CEEcCCC
Confidence 68899999999999999999999999999999997 663 3566554 3 445443 2 2555553
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.23 E-value=3.1e-07 Score=77.87 Aligned_cols=61 Identities=15% Similarity=0.009 Sum_probs=45.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
.|-..+..++++++++++++++|||+.||+.+-+. +|.. ++| | +..+++++.. +++..+..
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~----~~~~-~am--~-na~~~lk~~a---~~i~~~~~ 257 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY----AGVG-VAV--D-NAIPSVKEVA---NFVTKSNL 257 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSEE-EEC--T-TSCHHHHHHC---SEECCCTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHh----CCcE-EEe--C-CCCHHHHHhC---CEEcCCCC
Confidence 68889999999999999999999999999999997 5522 344 4 4456666542 25555543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.21 E-value=2.9e-06 Score=71.59 Aligned_cols=61 Identities=10% Similarity=0.054 Sum_probs=45.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
.|-..+..+++++|++++++++|||+.||+.+-+. +|.. ++|.. ..+++++. + +++..+..
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~----ag~~-vam~N---a~~~lk~~-A--~~v~~~~~ 250 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKM----ARYS-FAMGN---AAENIKQI-A--RYATDDNN 250 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----CSEE-EECTT---CCHHHHHH-C--SEECCCGG
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHh----CCeE-EEeCC---CCHHHHHh-C--CEEcCCCC
Confidence 68899999999999999999999999999999986 5533 33433 33556554 2 36666543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.16 E-value=6.7e-06 Score=69.25 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=41.9
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.++++++++++|||+.||+.+-+. +|.. ++|..+ . +++++.
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~----a~~~-va~~na--~-~~~k~~ 258 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSN----FKYS-FAVANA--T-DSAKSH 258 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHS----CSEE-EECTTC--C-HHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHh----CCcE-EEeCCC--C-HHHHHh
Confidence 78899999999999999999999999999999997 7743 455443 3 455543
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=4.4e-06 Score=68.13 Aligned_cols=108 Identities=16% Similarity=0.125 Sum_probs=70.8
Q ss_pred CCCCCCCccHHHHHH---h-CCCcEEEEcCCchH------HHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCC
Q 024003 141 IGANRLYPGVSDALK---L-ASSRIYIVTSNQSR------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~-~g~~laIvTnK~~~------~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~ 210 (274)
....+|+||+.|+|. + .++.+.|+|+.+.. ....=|++|++-..+...+++++ | ..+..
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-K----------~~~~~ 138 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-K----------TVVSA 138 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-S----------TTSCC
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-c----------ceecC
Confidence 345689999999998 4 45678899987643 23344776565443334555443 2 11222
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
+ ++|.|++.-+.++.+ +|+++|...+.|+... ....+-..+.++.+..+
T Consensus 139 d----~lIDD~p~n~~~~~~----~g~~~il~~~~~N~~~----~~~~~~~Rv~~W~e~~~ 187 (195)
T d1q92a_ 139 D----LLIDDRPDITGAEPT----PSWEHVLFTACHNQHL----QLQPPRRRLHSWADDWK 187 (195)
T ss_dssp S----EEEESCSCCCCSCSS----CSSEEEEECCTTTTTC----CCCTTCEEECCTTSCHH
T ss_pred e----EEecCcHHHHHHHhc----CCCeEEEECCCcccCC----CCCCCceeeCCHHHHHH
Confidence 2 999999999988876 8999999999997541 11233456777777543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.96 E-value=6e-05 Score=62.41 Aligned_cols=35 Identities=14% Similarity=-0.015 Sum_probs=33.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
.|-..+..+++++|+++++++++||+.||+.+-+.
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~ 196 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET 196 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhh
Confidence 68889999999999999999999999999999987
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.66 E-value=8.9e-05 Score=59.96 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=74.9
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
..|...|+.++++|......+....+. +++.. ...+. .+|...+..+++++++++++++||||..+|+.+=+.
T Consensus 42 ~~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~---~~~~~--~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~- 114 (177)
T d1k1ea_ 42 KMLMDADIQVAVLSGRDSPILRRRIAD-LGIKL---FFLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA- 114 (177)
T ss_dssp HHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCE---EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH-
T ss_pred HHHhhhcEEEEEecCCchhHHHHHHhh-hcccc---ccccc--ccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh-
Confidence 444589999999999999999998886 77642 22232 378888999999999999999999999999999987
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeec------hhHHHhh
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTK 272 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~------~~~~~~~ 272 (274)
+|+. +++. +..++.++. ++ +++.+ +++|++.
T Consensus 115 ---~g~s-iap~---nA~~~vk~~-A~--~Vt~~~GG~GavrE~~e~ 151 (177)
T d1k1ea_ 115 ---CGTS-FAVA---DAPIYVKNA-VD--HVLSTHGGKGAFREMSDM 151 (177)
T ss_dssp ---SSEE-EECT---TSCHHHHTT-SS--EECSSCTTTTHHHHHHHH
T ss_pred ---CCeE-EEcC---CccHHHHHh-CC--EEeCCCCCCchHHHHHHH
Confidence 6643 3332 223334332 33 66655 5566554
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.46 E-value=0.00019 Score=55.51 Aligned_cols=107 Identities=17% Similarity=0.164 Sum_probs=70.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
++=|++.++++ ++|+++.|+|.-....++.+-++ +|++ .+++.-. |+--...++++.. ...+.||||+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~----~v~~~~~---p~~k~~~v~~~q~-~~~v~~vGDg 91 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVL---PHQKSEEVKKLQA-KEVVAFVGDG 91 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCC---HHHHHHHHHHHTT-TSCEEEEECS
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhh----hhccccc---hhHHHHHHHHHHc-CCEEEEEeCC
Confidence 57789999988 89999999999999999999996 9985 4555432 3322233333332 2578999999
Q ss_pred hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHHh
Q 024003 222 LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 271 (274)
Q Consensus 222 ~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~~ 271 (274)
.||..+-++ |+ ++++.|-++ +.....++ +++.+ +..+..
T Consensus 92 ~nD~~aL~~----Ad---vgia~~~~~--~~~~~aAD--ivl~~~~l~~i~~ 132 (135)
T d2b8ea1 92 INDAPALAQ----AD---LGIAVGSGS--DVAVESGD--IVLIRDDLRDVVA 132 (135)
T ss_dssp SSSHHHHHH----SS---EEEEECCC----------S--EEESSCCTHHHHH
T ss_pred CCcHHHHHh----CC---eeeecCccC--HHHHHhCC--EEEECCCHHHHHH
Confidence 999999887 55 566666333 23333334 77744 444443
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.27 E-value=0.00067 Score=62.37 Aligned_cols=94 Identities=18% Similarity=0.210 Sum_probs=72.9
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh--------CCCCCCceEecCCCCC-------------------
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGP------------------- 196 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~--------gl~~~f~~v~g~~~~p------------------- 196 (274)
=|.+..+|. ++|.++.++||.+-.+++.+++..+ .+..+||.||....||
T Consensus 187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 266 (458)
T d2bdea1 187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 266 (458)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCCE
T ss_pred ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCcc
Confidence 377888887 7899999999999999999999656 4557999998643110
Q ss_pred -------cH-----HHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEe
Q 024003 197 -------KV-----NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 197 -------kp-----~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~ 243 (274)
++ --+..+.+-+|....+++||||+. .||..++. ..|.++++|-
T Consensus 267 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk---~~gWrT~~Ii 323 (458)
T d2bdea1 267 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKK---DCNWRTALVV 323 (458)
T ss_dssp EECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHH---HHCSEEEEEC
T ss_pred ccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhh---hcCCceEEeh
Confidence 01 124556666788888999999997 59998886 3799999994
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.18 E-value=0.00036 Score=53.20 Aligned_cols=46 Identities=20% Similarity=0.126 Sum_probs=35.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHHhCCCCCCceEec
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~---------------~~~~~~iL~~~~gl~~~f~~v~g 191 (274)
+.|.+++.+.|. ++|+++.|.|+.. ...+..-|++ +|+ .|=..+.|
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~-~gI-~Yd~Li~g 86 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-HQV-PYDEILVG 86 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-TTC-CCSEEEEC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHH-cCC-CceEEEEC
Confidence 468899999998 8999999999985 3457777886 888 35344445
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.90 E-value=0.0037 Score=49.60 Aligned_cols=106 Identities=13% Similarity=0.104 Sum_probs=70.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCce---------------------------EecCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR---------------------------LYGLGT 194 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~---------------------------v~g~~~ 194 (274)
+|-|++.++++ +.|+++.++|.-....+..+-++ .|+...-.. |++.-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 67799999998 89999999999999999999997 998532211 222111
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
..+...+-+.+++.| ..+.||||+.||.-+=+. |. +|+.-|-++. .....++ +++.+
T Consensus 99 p~~K~~lv~~l~~~g---~~Va~vGDG~nD~~AL~~----Ad---vGIa~~~gt~--~a~~aAd--ivl~~ 155 (168)
T d1wpga2 99 PSHKSKIVEYLQSYD---EITAMTGDGVNDAPALKK----AE---IGIAMGSGTA--VAKTASE--MVLAD 155 (168)
T ss_dssp HHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHH----SS---EEEEETTSCH--HHHHTCS--EEETT
T ss_pred hhHHHHHHHHHHhcc---cceeEEecCCCCHHHHHh----CC---EEEEeccccH--HHHHhCC--EEEcc
Confidence 011123333444444 568999999999998887 55 6666674443 3322333 66554
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.00099 Score=53.40 Aligned_cols=36 Identities=6% Similarity=-0.149 Sum_probs=28.4
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
.+.++++|+++++++.+||+.||+.+-+. ||. .|+|
T Consensus 193 ~~~~~~l~i~~~~~iafGD~~NDl~Ml~~----a~~-~vaV 228 (232)
T d1xvia_ 193 IATYQQLSGKRPTTLGLGDGPNDAPLLEV----MDY-AVIV 228 (232)
T ss_dssp HHHHHHHHSSCCEEEEEESSGGGHHHHHT----SSE-EEEC
T ss_pred HHHHHHcCCChhcEEEEcCCHhHHHHHHh----CCe-EEEE
Confidence 33444678999999999999999999997 775 3444
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.00021 Score=57.86 Aligned_cols=40 Identities=15% Similarity=0.037 Sum_probs=28.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhccCccCCCcEEEE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agv~~i~v 242 (274)
.|-..+.+++ +.++++++.||| +.||+.+-++ +|...++|
T Consensus 185 sKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~----~g~~~~~v 228 (243)
T d2amya1 185 DKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTD----PRTMGYSV 228 (243)
T ss_dssp SGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHC----TTEEEEEC
T ss_pred CHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHc----cCCcEEEe
Confidence 5666665553 678899999999 6799999986 77555555
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.94 E-value=0.0009 Score=54.27 Aligned_cols=42 Identities=14% Similarity=0.029 Sum_probs=35.7
Q ss_pred CcHHHHHHHHhhCC-CCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 196 PKVNVLKQLQKKPE-HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 196 pkp~~l~~~l~~l~-~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
.|...+..++++++ ..+++++.|||+.||+.+=+. || ..++|
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~----a~-~~va~ 221 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV----VD-KVFIV 221 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT----SS-EEEEE
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHc----CC-cEEEe
Confidence 78889999999984 888999999999999999987 66 34555
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.55 E-value=0.0014 Score=52.47 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=32.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCCh----hHHHHhhccCccCCCcEEEE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRL----ATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~----~Di~aA~~~~~~Agv~~i~v 242 (274)
.|-..+..+++ .++++++.+||+. ||+++=+. ||...++|
T Consensus 185 sKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~----a~~~~~av 228 (244)
T d2fuea1 185 DKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFAD----PRTVGHSV 228 (244)
T ss_dssp STTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHS----TTSEEEEC
T ss_pred cHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHc----CCCcEEEc
Confidence 67788887764 4889999999985 99999987 77666666
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.39 E-value=0.0047 Score=51.05 Aligned_cols=59 Identities=8% Similarity=-0.059 Sum_probs=44.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.|...+..+++++|++++++++|||+.||+.+-+. +|. +|+| |-+. +++++.. +++..+
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~----a~~-svav--~na~-~~lk~~A---~~vt~~ 244 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH----AAI-GVAM--GQAK-EDVKAAA---DYVTAP 244 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE-EEEC--TTSC-HHHHHHS---SEECCC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHh----CCe-EEEe--CCCC-HHHHHhC---CEEeCC
Confidence 68899999999999999999999999999999987 675 3555 3333 4454432 255554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.00 E-value=0.0023 Score=50.95 Aligned_cols=61 Identities=10% Similarity=0.059 Sum_probs=41.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
.|-..+..++++ +++++||||.||+.+=+. +|. .++|.=|- . ...|. +++.+++++.+.||
T Consensus 159 ~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~----~~~-~~av~~g~--~----~~~A~--~~~~~~~ev~~~l~ 219 (229)
T d1u02a_ 159 NKGSAIRSVRGE-----RPAIIAGDDATDEAAFEA----NDD-ALTIKVGE--G----ETHAK--FHVADYIEMRKILK 219 (229)
T ss_dssp CHHHHHHHHHTT-----SCEEEEESSHHHHHHHHT----TTT-SEEEEESS--S----CCCCS--EEESSHHHHHHHHH
T ss_pred CHHHHHHHHhcc-----ccceeecCCCChHHHHhc----cCC-eEEEEeCC--C----CccCe--EEcCCHHHHHHHHH
Confidence 677888887753 679999999999998775 432 34554342 1 12334 88888888766553
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=94.94 E-value=0.0078 Score=47.82 Aligned_cols=28 Identities=25% Similarity=0.107 Sum_probs=17.7
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
+|++||||||+|+-..+......+++++
T Consensus 6 li~~DlDGTLl~~~~~i~~~~~~al~~l 33 (232)
T d1xvia_ 6 LVFSDLDGTLLDSHSYDWQPAAPWLTRL 33 (232)
T ss_dssp EEEEECTTTTSCSSCCSCCTTHHHHHHH
T ss_pred EEEEECCCCccCCcCcCCHHHHHHHHHH
Confidence 6777999999987543433334444444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.09 E-value=0.014 Score=46.81 Aligned_cols=17 Identities=29% Similarity=0.325 Sum_probs=15.3
Q ss_pred CCceEEEecCcccccCH
Q 024003 1 MEDLYALDFDGVICDSC 17 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~ 17 (274)
|.|+|+||+||||+|+-
T Consensus 1 miKli~~DlDGTLl~~~ 17 (243)
T d1wzca1 1 MIRLIFLDIDKTLIPGY 17 (243)
T ss_dssp CEEEEEECCBTTTBSSS
T ss_pred CcEEEEEeCCCCCCCCC
Confidence 88999999999998753
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=94.05 E-value=0.014 Score=48.00 Aligned_cols=46 Identities=11% Similarity=0.224 Sum_probs=28.0
Q ss_pred HHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHH
Q 024003 172 VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 227 (274)
Q Consensus 172 ~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 227 (274)
++.++++ +|+..- +.+.-+|+..+-+++..+ |. .+-||.+.-.+..
T Consensus 191 l~~l~~~-~~i~~~-~~~a~GD~~ND~~Ml~~a----~~----svav~na~~~lk~ 236 (260)
T d2rbka1 191 IDEIIRH-FGIKLE-ETMSFGDGGNDISMLRHA----AI----GVAMGQAKEDVKA 236 (260)
T ss_dssp HHHHHHH-HTCCGG-GEEEEECSGGGHHHHHHS----SE----EEECTTSCHHHHH
T ss_pred HHHHHHh-ccccHh-heeEecCCcccHHHHHhC----Ce----EEEeCCCCHHHHH
Confidence 4667774 888643 333335666778877543 32 3777887666543
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.85 E-value=0.0063 Score=48.60 Aligned_cols=83 Identities=8% Similarity=-0.063 Sum_probs=61.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCC--CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~--pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..+=||+.++|+ .+.+.++|-|+-.+++|+.+++. +.....|......+.. .... ..+-++.+|-+.+++|+|.
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~-ldp~~~~~~~~~r~~c~~~~~~-~~KdL~~l~~~l~~vvivD 131 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGN-YVKDLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCSSCCEEEEECGGGSEEETTE-EECCGGGSCSCGGGEEEEC
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHH-hccCCceeEEEEeeeeeecCCc-ccccHhhcCCCHHHeEEEc
Confidence 356699999999 78899999999999999999996 8776666666554321 1100 1123456788889999999
Q ss_pred CChhHHHHh
Q 024003 220 DRLATLKNV 228 (274)
Q Consensus 220 Ds~~Di~aA 228 (274)
|+..-...-
T Consensus 132 d~~~~~~~~ 140 (181)
T d1ta0a_ 132 NSPASYVFH 140 (181)
T ss_dssp SCGGGGTTC
T ss_pred CChhhhhcC
Confidence 998866543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.72 E-value=0.19 Score=41.97 Aligned_cols=133 Identities=10% Similarity=0.155 Sum_probs=86.1
Q ss_pred hhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 106 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
+.-.|+..+|++.+++.+. .+. ..++-||..++|+ ++-.+-.|+|+.-..+++++.+. .|+.
T Consensus 57 LIvPFl~a~Gvt~edL~~f----SE~-----------~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~-~gfp 120 (308)
T d1y8aa1 57 LLTPFLAAAGVKNRDVERI----AEL-----------SAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASM-IGVR 120 (308)
T ss_dssp HHHHHHHHTTCCHHHHHHH----HHH-----------HCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCC
T ss_pred hHHHHHHHhCCCHHHHHHH----hhh-----------ceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhh-cCCC
Confidence 4456777888887764221 111 2578899999999 77899999999999999999994 8873
Q ss_pred CCCceEecCCC----C--C-------------------------------------------------cHHHHHHHHhhC
Q 024003 184 ITPDRLYGLGT----G--P-------------------------------------------------KVNVLKQLQKKP 208 (274)
Q Consensus 184 ~~f~~v~g~~~----~--p-------------------------------------------------kp~~l~~~l~~l 208 (274)
+. +++.+. - | |..++...++..
T Consensus 121 --~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~ 197 (308)
T d1y8aa1 121 --GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESK 197 (308)
T ss_dssp --SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHH
T ss_pred --ce-eecccccccccCCChHHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccc
Confidence 44 444320 0 1 112344445555
Q ss_pred CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 209 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
++++. +|||||.+|++.=+.+ .|-.-++|++- |..-.+++|. +.+-|+.
T Consensus 198 ~~~~~--~~VGDSITDve~Lr~~---r~~gGlaIsFN-GN~Yal~eA~----VaiiS~~ 246 (308)
T d1y8aa1 198 GIDFP--VVVGDSISDYKMFEAA---RGLGGVAIAFN-GNEYALKHAD----VVIISPT 246 (308)
T ss_dssp TCSSC--EEEECSGGGHHHHHHH---HHTTCEEEEES-CCHHHHTTCS----EEEECSS
T ss_pred cCCcc--eeccCccccHHHHHHH---hcCCCeeEEec-Cccccccccc----eEEeccc
Confidence 66654 9999999999887663 23334667765 3444565542 4444443
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=91.32 E-value=0.031 Score=41.78 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=31.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHHhCCCCCCceE
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRL 189 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~~gl~~~f~~v 189 (274)
+|+|++.+.|. ++|.++.|.|+.+... +..-|++ .|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-cCCC--ceeh
Confidence 47788888888 7999999999998765 4445564 5663 5555
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.58 E-value=0.31 Score=37.78 Aligned_cols=12 Identities=42% Similarity=0.783 Sum_probs=11.3
Q ss_pred eEEEecCccccc
Q 024003 4 LYALDFDGVICD 15 (274)
Q Consensus 4 ~ilFDlDGTLvD 15 (274)
+|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 799999999997
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=86.09 E-value=0.13 Score=40.46 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=37.0
Q ss_pred ccHHHHHHhCCCcEEEEcCCc-hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHH
Q 024003 148 PGVSDALKLASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 226 (274)
Q Consensus 148 pGv~e~L~~~g~~laIvTnK~-~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 226 (274)
+-+.....+.++.......++ ....+.++++ +|+..---..+|.+ -++-+++ +..|++ +-++|+...+.
T Consensus 60 ~~v~~~~~~l~~~~~~~~~~~K~~~l~~~~~~-~~i~~~~v~~vGDd-~nDl~~l----~~~g~s----iap~nA~~~vk 129 (177)
T d1k1ea_ 60 PILRRRIADLGIKLFFLGKLEKETACFDLMKQ-AGVTAEQTAYIGDD-SVDLPAF----AACGTS----FAVADAPIYVK 129 (177)
T ss_dssp HHHHHHHHHHTCCEEEESCSCHHHHHHHHHHH-HTCCGGGEEEEECS-GGGHHHH----HHSSEE----EECTTSCHHHH
T ss_pred hHHHHHHhhhcccccccccccHHHHHHHHHHH-hcCCcceeEEecCC-ccHHHHH----hhCCeE----EEcCCccHHHH
Confidence 334343334444433333333 3445677885 88875433444543 3555554 444554 77788877765
Q ss_pred H
Q 024003 227 N 227 (274)
Q Consensus 227 a 227 (274)
.
T Consensus 130 ~ 130 (177)
T d1k1ea_ 130 N 130 (177)
T ss_dssp T
T ss_pred H
Confidence 3
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=85.22 E-value=0.49 Score=38.01 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=39.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g 191 (274)
++-|...++|+ ++|++++|+|+++...+..+++. +++...++.+++
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~-l~l~~~~~~~i~ 69 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCIT 69 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCCSTTCEEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-hcCcCCCcEEEE
Confidence 45688888888 79999999999999999999997 999877776664
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.98 E-value=0.13 Score=40.42 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=13.4
Q ss_pred ceEEEecCcccccCH
Q 024003 3 DLYALDFDGVICDSC 17 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~ 17 (274)
..+++||||||+.|.
T Consensus 16 ~~LVLDLDeTLihs~ 30 (181)
T d1ta0a_ 16 ICVVIDLDETLVHSS 30 (181)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEEeCCCCEEccc
Confidence 589999999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.99 E-value=0.39 Score=37.23 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=20.5
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
+++|||||||+|+-..+......+++++
T Consensus 3 i~lFDlDGTLl~~~~~is~~~~~~i~~l 30 (244)
T d2fuea1 3 LCLFDVDGTLTPARQKIDPEVAAFLQKL 30 (244)
T ss_dssp EEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred EEEEccccCccCCCCcCCHHHHHHHHHH
Confidence 3558999999997666656666666666
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=81.32 E-value=0.57 Score=40.74 Aligned_cols=23 Identities=26% Similarity=0.267 Sum_probs=18.3
Q ss_pred ceEEEecCcccccCHHHHHHHHH
Q 024003 3 DLYALDFDGVICDSCEETALSAV 25 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n 25 (274)
|.|+||.||+|+|.-.-+-.|..
T Consensus 2 ~~i~fd~dGVll~~~~~~D~s~l 24 (380)
T d1qyia_ 2 KKILFDVDGVFLSEERCFDVSAL 24 (380)
T ss_dssp CEEEECSBTTTBCSHHHHHHHHH
T ss_pred ceEEEeCCcEEEcceeecchHhh
Confidence 78999999999998876554433
|