Citrus Sinensis ID: 024011
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 274 | 2.2.26 [Sep-21-2011] | |||||||
| Q53FA7 | 332 | Quinone oxidoreductase PI | yes | no | 0.941 | 0.777 | 0.435 | 2e-54 | |
| O97764 | 330 | Zeta-crystallin OS=Bos ta | no | no | 0.945 | 0.784 | 0.350 | 4e-35 | |
| Q6AYT0 | 329 | Quinone oxidoreductase OS | yes | no | 0.945 | 0.787 | 0.354 | 8e-34 | |
| Q5R4S7 | 329 | Quinone oxidoreductase OS | no | no | 0.945 | 0.787 | 0.332 | 4e-33 | |
| P11415 | 329 | Quinone oxidoreductase OS | yes | no | 0.948 | 0.790 | 0.340 | 1e-32 | |
| P47199 | 331 | Quinone oxidoreductase OS | yes | no | 0.945 | 0.782 | 0.352 | 3e-32 | |
| Q08257 | 329 | Quinone oxidoreductase OS | no | no | 0.945 | 0.787 | 0.324 | 5e-32 | |
| Q0MVN8 | 329 | Quinone oxidoreductase OS | no | no | 0.945 | 0.787 | 0.332 | 2e-31 | |
| P96202 | 2188 | Phthiocerol synthesis pol | no | no | 0.854 | 0.106 | 0.331 | 3e-31 | |
| Q7TXL8 | 2188 | Phthiocerol/phenolphthioc | no | no | 0.854 | 0.106 | 0.331 | 3e-31 |
| >sp|Q53FA7|QORX_HUMAN Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 158/262 (60%), Gaps = 4/262 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 60
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 61 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 120
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+ L+H G SG+GT AIQ+ + G VTAGS++KL +
Sbjct: 121 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 180
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 181 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 240
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GG LF+K L +G
Sbjct: 241 MGGGDIN---GPLFSKLLFKRG 259
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May be involved in the generation of reactive oxygen species (ROS). Has low NADPH-dependent beta-naphthoquinone reductase activity, with a preference for 1,2-beta-naphthoquinone over 1,4-beta-naphthoquinone. Has low NADPH-dependent diamine reductase activity (in vitro). Homo sapiens (taxid: 9606) EC: 1EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2 | Back alignment and function description |
|---|
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+AI + + G PEVL+LQ +V P KD +VLIKV+A +N DT R G++ K P
Sbjct: 8 MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNI-KPLLP 66
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I +VG++VS +K GD+V GGYAE V +P + K
Sbjct: 67 YTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQG 126
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T + + ++ + PGES LVHG S G+G A Q+ + G++V TA +EE
Sbjct: 127 AAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQ 186
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ + GA N+K D++ ++K+ G KGVDVI++ + +L L+ GR+ ++
Sbjct: 187 KIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSNDLNLLSHGGRVIVV 246
Query: 238 GTQGGAKTELNITSLFAKRLTVQGI 262
G++G E+N K +++G+
Sbjct: 247 GSRG--TIEINPRDTMTKESSIKGV 269
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Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA. Bos taurus (taxid: 9913) |
| >sp|Q6AYT0|QOR_RAT Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (362), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 139/265 (52%), Gaps = 6/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+AI + + G PEVL+LQ +V P + +VLIKV A +N +T R G+Y K A P
Sbjct: 8 MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR-KPALP 66
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I SVG VS +K GD+V C GGYAE P+P + +
Sbjct: 67 YTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQG 126
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T +F ++ GES LVHG S G+G Q+ + G++V TAGSEE
Sbjct: 127 AALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGK 186
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ GA N+K +++ ++K G KGVDVI++ + +L L+ GR+ ++
Sbjct: 187 KLVLQNGAHEVFNHKEANYIDKIKTSAGDKGVDVIIEMLANKNLSNDLKLLSCGGRVIVV 246
Query: 238 GTQGGAKTELNITSLFAKRLTVQGI 262
G +G E+N AK ++ G+
Sbjct: 247 GCRG--SIEINPRDTMAKETSIIGV 269
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Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 5 |
| >sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 144/265 (54%), Gaps = 6/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A+ + + G PEVL+LQ ++ P KD + LIKV A +N +T R G+Y K P
Sbjct: 8 MRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR-KPLLP 66
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I +VG N S +K GD+V + GGYAE V +P + K
Sbjct: 67 YTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 126
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T + + ++H+ GES LVHG S G+G A Q+ + G++V TAG+EE
Sbjct: 127 AAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQ 186
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ GA N++ +++ ++K+ G KG+DVI++ + ++L L+ G++ ++
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNKDLSLLSHGGQVIVV 246
Query: 238 GTQGGAKTELNITSLFAKRLTVQGI 262
G++G E+N AK ++ G+
Sbjct: 247 GSRG--TIEINPRDTMAKESSIIGV 269
|
Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 5 |
| >sp|P11415|QOR_CAVPO Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+AI + + G PEVL++Q +V P KD +VLIKV A +N +T R G+Y
Sbjct: 8 MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLLPY 67
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
PG + +G + S+G +VS +K GD+V GGYAE V +P + + A
Sbjct: 68 TPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGA 127
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
A T +F ++ GES LVHG S G+G A Q+ + G++V TAG+EE
Sbjct: 128 AIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQK 187
Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
V GA N++ ++ +K+ G KGVDVI++ + +L L+ GR+ I+G
Sbjct: 188 VVLQNGAHEVFNHRDAHYIDEIKKSIGEKGVDVIIEMLANVNLSNDLKLLSCGGRVIIVG 247
Query: 239 TQGGAKTELNITSLFAKRLTVQGI 262
+G E+N AK T+ G+
Sbjct: 248 CRG--SIEINPRDTMAKESTISGV 269
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Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding. Cavia porcellus (taxid: 10141) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 5 |
| >sp|P47199|QOR_MOUSE Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 141/267 (52%), Gaps = 8/267 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+AI + + G PEVL+LQ +V P + +VLIKV A +N +T R G+Y K A P
Sbjct: 8 MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR-KPALP 66
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I SVG VS +K GD+V C GGYAE + P+P ++ +
Sbjct: 67 YTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQG 126
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T +F ++ GES LVHG S G+G Q+ + G++V TAGSEE
Sbjct: 127 AALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGK 186
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETG--GKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
+ GA N+K +++ ++K G KGVDVI++ + +L L+ GR+
Sbjct: 187 KLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEMLANENLSNDLKLLSHGGRVV 246
Query: 236 IIGTQGGAKTELNITSLFAKRLTVQGI 262
++G +G E+N AK ++ G+
Sbjct: 247 VVGCRG--PIEINPRDTMAKETSIIGV 271
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Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 5 |
| >sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1 | Back alignment and function description |
|---|
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 144/265 (54%), Gaps = 6/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A+ + + G PEVL+L+ ++ P KD +VLIKV A +N +T R G+Y K P
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 66
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I +VG N S +K GD+V + GGYAE V +P + K
Sbjct: 67 YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 126
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T + + ++ + GES LVHG S G+G A Q+ + G+++ TAG+EE
Sbjct: 127 AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 186
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ GA N++ +++ ++K+ G KG+D+I++ + ++L L+ GR+ ++
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 246
Query: 238 GTQGGAKTELNITSLFAKRLTVQGI 262
G++G E+N AK ++ G+
Sbjct: 247 GSRG--TIEINPRDTMAKESSIIGV 269
|
Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 5 |
| >sp|Q0MVN8|QOR_PIG Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 144/265 (54%), Gaps = 6/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M AI + + G PEV++LQ +V P KD++VLIKV A +N DT R G++ K P
Sbjct: 8 MSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHNM-KPLLP 66
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PGL+ +G + +VG++VS +K GD+V + GGYAE V +P + K
Sbjct: 67 YTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYAEYALAADDTVYMLPEKLDFKQG 126
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T + ++ + GE L+HG S G+G A Q+ + G++V TAG+EE
Sbjct: 127 AAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQ 186
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ GA N++ +++ ++K+ G KG+DVI++ + +L L+ GR+ I+
Sbjct: 187 NIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSHGGRVIIV 246
Query: 238 GTQGGAKTELNITSLFAKRLTVQGI 262
G++G E+N K +++G+
Sbjct: 247 GSRG--PIEINPRDTMTKGSSIKGV 269
|
Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 6 EC: . EC: 5 EC: . EC: 5 |
| >sp|P96202|PPSC_MYCTU Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis GN=ppsC PE=1 SV=2 | Back alignment and function description |
|---|
Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Query: 6 ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
I QPG + L + EV+ + + D+V ++V A LN +D L+ G YP GA+P G EC
Sbjct: 1463 IDQPGRLDALNVHEVKRGRPQGDQVEVRVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGEC 1522
Query: 66 SGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
G + ++G V +VG +V A G G + + A V+P+P ++ +AA F
Sbjct: 1523 VGYVTAIGDEVDGVEVGQRVIAF-GPGTFGTHLGTIADLVVPIPDTLADNEAATFGVAYL 1581
Query: 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
T W ++ LSPGE L+H + G+G A+ + K G R++ TAGS+ K + LG
Sbjct: 1582 TAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV 1641
Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+ + ++ DF + E T G GVDV+L+ + QR + L GR +G +
Sbjct: 1642 EYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKK 1696
|
Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives. Mycobacterium tuberculosis (taxid: 1773) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXL8|PPSC_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsC PE=1 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Query: 6 ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
I QPG + L + EV+ + + D+V ++V A LN +D L+ G YP GA+P G EC
Sbjct: 1463 IDQPGRLDALNVHEVKRGRPQGDQVEVRVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGEC 1522
Query: 66 SGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
G + ++G V +VG +V A G G + + A V+P+P ++ +AA F
Sbjct: 1523 VGYVTAIGDEVDGVEVGQRVIAF-GPGTFGTHLGTIADLVVPIPDTLADNEAATFGVAYL 1581
Query: 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
T W ++ LSPGE L+H + G+G A+ + K G R++ TAGS+ K + LG
Sbjct: 1582 TAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV 1641
Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+ + ++ DF + E T G GVDV+L+ + QR + L GR +G +
Sbjct: 1642 EYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKK 1696
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 274 | ||||||
| 224078882 | 325 | predicted protein [Populus trichocarpa] | 0.948 | 0.8 | 0.857 | 1e-127 | |
| 255560828 | 325 | quinone oxidoreductase, putative [Ricinu | 0.948 | 0.8 | 0.838 | 1e-124 | |
| 357446363 | 325 | Quinone oxidoreductase PIG3 [Medicago tr | 0.948 | 0.8 | 0.830 | 1e-124 | |
| 388523009 | 325 | unknown [Medicago truncatula] | 0.948 | 0.8 | 0.826 | 1e-123 | |
| 449501666 | 288 | PREDICTED: quinone oxidoreductase PIG3-l | 0.967 | 0.920 | 0.826 | 1e-122 | |
| 449443438 | 325 | PREDICTED: quinone oxidoreductase PIG3-l | 0.952 | 0.803 | 0.831 | 1e-122 | |
| 358249074 | 325 | uncharacterized protein LOC100813682 [Gl | 0.952 | 0.803 | 0.812 | 1e-120 | |
| 357446355 | 272 | Quinone oxidoreductase [Medicago truncat | 0.985 | 0.992 | 0.792 | 1e-120 | |
| 147863686 | 325 | hypothetical protein VITISV_008189 [Viti | 0.948 | 0.8 | 0.803 | 1e-120 | |
| 357471443 | 855 | Maturase K [Medicago truncatula] gi|3555 | 0.952 | 0.305 | 0.804 | 1e-120 |
| >gi|224078882|ref|XP_002305665.1| predicted protein [Populus trichocarpa] gi|222848629|gb|EEE86176.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/260 (85%), Positives = 240/260 (92%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+VIT PG PEVLQLQEVEDPQI +DEVLIKVEATALNRADTLQR+G YPPPKGASPY
Sbjct: 1 MKAVVITTPGGPEVLQLQEVEDPQINEDEVLIKVEATALNRADTLQRQGKYPPPKGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSGTI +VGKNVSRWK+GDQVCALL GGGYAEKVAVPAGQVLPVP GVSLKDAAA
Sbjct: 61 PGLECSGTIEAVGKNVSRWKIGDQVCALLSGGGYAEKVAVPAGQVLPVPQGVSLKDAAAL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFM S LS GE+FLVHGGSSGIGTFAIQ+ K QGV+VFVTAGSEEKLAVC
Sbjct: 121 PEVACTVWSTVFMMSRLSAGETFLVHGGSSGIGTFAIQIAKHQGVKVFVTAGSEEKLAVC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
KDLGADVCINYKTEDFVARVKEETGGKGVDVILD +GA YFQ+N+ SLNIDGRLF++G
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDSVGAPYFQKNVDSLNIDGRLFLLGFM 240
Query: 241 GGAKTELNITSLFAKRLTVQ 260
GGA T++N+ SLFAKR+TVQ
Sbjct: 241 GGAVTQVNLASLFAKRITVQ 260
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560828|ref|XP_002521427.1| quinone oxidoreductase, putative [Ricinus communis] gi|223539326|gb|EEF40917.1| quinone oxidoreductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/260 (83%), Positives = 233/260 (89%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+VIT G PEVLQLQEVEDPQIKDDEVLIKV ATA+NRADTLQR G +PPPKGASPY
Sbjct: 1 MKAVVITTLGGPEVLQLQEVEDPQIKDDEVLIKVHATAVNRADTLQRLGKHPPPKGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSGTI +VGK VSRWKVGD+VCALL GGGYAEKVAVPAGQVLPVP G+SLKDA AF
Sbjct: 61 PGLECSGTIEAVGKLVSRWKVGDEVCALLSGGGYAEKVAVPAGQVLPVPPGISLKDATAF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFM S LS GE+FL+HGGSSGIGTFAIQM K QGVRVF+TAGS+EKLA C
Sbjct: 121 PEVACTVWSTVFMMSRLSAGETFLIHGGSSGIGTFAIQMAKYQGVRVFITAGSQEKLAAC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K+LGADVCINY+TEDFVARVKEET GKGVDVILDCMGASY QRNL SLN+ GRLFIIG
Sbjct: 181 KELGADVCINYRTEDFVARVKEETNGKGVDVILDCMGASYLQRNLDSLNVGGRLFIIGFM 240
Query: 241 GGAKTELNITSLFAKRLTVQ 260
GGA ELN+ SL AKRLT+Q
Sbjct: 241 GGAVAELNLASLLAKRLTLQ 260
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357446363|ref|XP_003593459.1| Quinone oxidoreductase PIG3 [Medicago truncatula] gi|217072752|gb|ACJ84736.1| unknown [Medicago truncatula] gi|355482507|gb|AES63710.1| Quinone oxidoreductase PIG3 [Medicago truncatula] gi|388520243|gb|AFK48183.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/260 (83%), Positives = 234/260 (90%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVIT+PG PEVLQLQEV+DPQIKDDEVLIKV ATALNRADTLQRKG+YPPP+GASPY
Sbjct: 1 MKAIVITKPGEPEVLQLQEVQDPQIKDDEVLIKVHATALNRADTLQRKGAYPPPQGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSG I VGKNVS+WK+GDQVCALL GGGYAEKVAV GQVLPVP G+SLKDAA+F
Sbjct: 61 PGLECSGIIEFVGKNVSKWKIGDQVCALLAGGGYAEKVAVAEGQVLPVPPGISLKDAASF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWST+FMTS LS GE+ L+HGGSSGIGTFAIQ+ K G RVFVTAGSEEKLA C
Sbjct: 121 PEVACTVWSTIFMTSRLSKGETLLIHGGSSGIGTFAIQIAKYLGSRVFVTAGSEEKLAFC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGRLFIIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQ 260
GG TEL++ +LF KRLTVQ
Sbjct: 241 GGVSTELDLRALFGKRLTVQ 260
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388523009|gb|AFK49566.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/260 (82%), Positives = 234/260 (90%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVIT+PG PEVLQLQEV+DPQIKDDEVLIKV ATALNRADTLQRKG+YPPP+GASPY
Sbjct: 1 MKAIVITKPGEPEVLQLQEVQDPQIKDDEVLIKVHATALNRADTLQRKGAYPPPQGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSG I VGKNVS+WK+GDQVCALL GGGYAEKVAV GQVLPVP G+SLKDAA+F
Sbjct: 61 PGLECSGIIEFVGKNVSKWKIGDQVCALLAGGGYAEKVAVAEGQVLPVPPGISLKDAASF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWST+FMTS LS GE+ L+HGGSSGIGTFAIQ+ K G RVFVTAGSEEKLA C
Sbjct: 121 PEVACTVWSTIFMTSRLSKGETLLIHGGSSGIGTFAIQIAKYLGSRVFVTAGSEEKLAFC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DG+LFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGKLFIIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQ 260
GG TEL++ +LF KRLTVQ
Sbjct: 241 GGVSTELDLRALFGKRLTVQ 260
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449501666|ref|XP_004161431.1| PREDICTED: quinone oxidoreductase PIG3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/265 (82%), Positives = 238/265 (89%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+VI++PG EVLQLQEV+DP I +DEVLIKVEATALNRADTLQRKG YP PKG+SPY
Sbjct: 1 MKAVVISEPGEAEVLQLQEVDDPIINEDEVLIKVEATALNRADTLQRKGFYPAPKGSSPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLECSG I ++GKNVSRWKVGDQVCALL GGGYAEKVAVPAGQ+LP+P GVSLKDAA+
Sbjct: 61 LGLECSGIIQALGKNVSRWKVGDQVCALLSGGGYAEKVAVPAGQLLPIPPGVSLKDAASL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFMTS LS GE+ LVHGGSSGIGTFAIQ+ K QG +VFVTAGSEEKLAVC
Sbjct: 121 PEVACTVWSTVFMTSRLSRGETLLVHGGSSGIGTFAIQIAKYQGAKVFVTAGSEEKLAVC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
KDLGADVCINYKTEDFVARVKEET GKGVDVILD +GASYFQRNL SLN+DGRLFIIGT
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETDGKGVDVILDSVGASYFQRNLESLNLDGRLFIIGTM 240
Query: 241 GGAKTELNITSLFAKRLTVQGIVPL 265
GGA T+L+I SLFAKR TVQG + L
Sbjct: 241 GGAVTQLDIRSLFAKRATVQGKIIL 265
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449443438|ref|XP_004139484.1| PREDICTED: quinone oxidoreductase PIG3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/261 (83%), Positives = 235/261 (90%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+VI++PG EVLQLQEV+DP I +DEVLIKVEATALNRADTLQRKG YP PKG+SPY
Sbjct: 1 MKAVVISEPGEAEVLQLQEVDDPIINEDEVLIKVEATALNRADTLQRKGFYPAPKGSSPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLECSG I ++GKNVSRWKVGDQVCALL GGGYAEKVAVPAGQ+LP+P GVSLKDAA+
Sbjct: 61 LGLECSGIIQALGKNVSRWKVGDQVCALLSGGGYAEKVAVPAGQLLPIPPGVSLKDAASL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFMTS LS GE+ LVHGGSSGIGTFAIQ+ K QG +VFVTAGSEEKLAVC
Sbjct: 121 PEVACTVWSTVFMTSRLSRGETLLVHGGSSGIGTFAIQIAKYQGAKVFVTAGSEEKLAVC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
KDLGADVCINYKTEDFVARVKEET GKGVDVILD +GASYFQRNL SLN+DGRLFIIGT
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETDGKGVDVILDSVGASYFQRNLESLNLDGRLFIIGTM 240
Query: 241 GGAKTELNITSLFAKRLTVQG 261
GGA T+L+I SLFAKR TVQ
Sbjct: 241 GGAVTQLDIRSLFAKRATVQA 261
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358249074|ref|NP_001240244.1| uncharacterized protein LOC100813682 [Glycine max] gi|255642907|gb|ACU22674.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/261 (81%), Positives = 231/261 (88%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVIT+PG PEVLQL+EVEDP + DDE+LI V AT+LNRADT QRKGSYPPPKGASPY
Sbjct: 1 MKAIVITRPGGPEVLQLEEVEDPLVGDDELLIGVHATSLNRADTFQRKGSYPPPKGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLECSGT+LS+GKNVS WK+GDQVCALL GGGYAEKVAVP GQVLPVP+GVSL DAA+F
Sbjct: 61 LGLECSGTVLSLGKNVSSWKIGDQVCALLAGGGYAEKVAVPVGQVLPVPAGVSLTDAASF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFM S LS GE+ LVHGGSSGIGTFAIQ+ K +G RVFVTAGSEEKLA C
Sbjct: 121 PEVACTVWSTVFMMSRLSQGETLLVHGGSSGIGTFAIQIAKYRGSRVFVTAGSEEKLAFC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLDSLNFDGRLFIIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQG 261
GG T+ ++ L AKRLTVQG
Sbjct: 241 GGVSTQADLRPLLAKRLTVQG 261
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357446355|ref|XP_003593455.1| Quinone oxidoreductase [Medicago truncatula] gi|355482503|gb|AES63706.1| Quinone oxidoreductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/270 (79%), Positives = 236/270 (87%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVIT PG PEVLQLQEV+DPQ KD+EVLI+V ATALN ADT+QRKG YP P+GASPY
Sbjct: 1 MKAIVITTPGGPEVLQLQEVQDPQPKDNEVLIRVHATALNSADTVQRKGFYPIPQGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSGTI+ VG NVS+WK+GDQVCALL GGGYAEKVAVP GQVLPVP G+SLKDAA+F
Sbjct: 61 PGLECSGTIVCVGINVSKWKIGDQVCALLAGGGYAEKVAVPEGQVLPVPPGISLKDAASF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
EVACTVWST+FMTS LS GE+ LVHGGSSGIGTFAIQ+ K QG +VFVTAGSEEKLA C
Sbjct: 121 TEVACTVWSTIFMTSRLSKGETLLVHGGSSGIGTFAIQIAKYQGSKVFVTAGSEEKLAFC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGRLFIIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQGIVPLISGPW 270
GG TE+++ +LF KRLTVQGI S P+
Sbjct: 241 GGVSTEVDLRALFGKRLTVQGIADFGSYPF 270
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147863686|emb|CAN83618.1| hypothetical protein VITISV_008189 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/260 (80%), Positives = 234/260 (90%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEA+ALNRADTLQRKG +PPPKG+SPY
Sbjct: 1 MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEASALNRADTLQRKGLHPPPKGSSPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAAA
Sbjct: 61 PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAAI 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFM S L+ GE+FL+HGGSSGIGTFAIQ+ K G RVFVTAG+EEKLAVC
Sbjct: 121 PEVACTVWSTVFMMSRLTAGETFLIHGGSSGIGTFAIQIAKYIGARVFVTAGNEEKLAVC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
KDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+DGRLFIIG Q
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNVDGRLFIIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQ 260
GG E+N++ L A+RLTVQ
Sbjct: 241 GGTVAEVNLSGLLARRLTVQ 260
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357471443|ref|XP_003606006.1| Maturase K [Medicago truncatula] gi|355507061|gb|AES88203.1| Maturase K [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/261 (80%), Positives = 231/261 (88%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVIT PG PEVLQLQEV+DPQ KD+EVLI+V ATALN ADT+QRKG YP P+GASPY
Sbjct: 1 MKAIVITTPGGPEVLQLQEVQDPQPKDNEVLIRVHATALNSADTVQRKGFYPIPQGASPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSGTI+ VG NVS+WK+GDQVCALL GGGYAEKVAVP GQVLPVP G+SLKDAA+F
Sbjct: 61 PGLECSGTIVCVGINVSKWKIGDQVCALLAGGGYAEKVAVPEGQVLPVPPGISLKDAASF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
EVACTVWST+FMTS LS GE+ LVHGGSSGIGTFAIQ+ K QG +VFVTAGSEEKLA C
Sbjct: 121 TEVACTVWSTIFMTSRLSKGETLLVHGGSSGIGTFAIQIAKYQGSKVFVTAGSEEKLAFC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGRLFIIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQG 261
GG TE+++ +LF KRLTVQ
Sbjct: 241 GGVSTEVDLRALFGKRLTVQA 261
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 274 | ||||||
| TAIR|locus:2119682 | 325 | AT4G21580 [Arabidopsis thalian | 0.952 | 0.803 | 0.777 | 5.7e-107 | |
| UNIPROTKB|P72043 | 328 | Rv3777 "Oxidoreductase" [Mycob | 0.967 | 0.807 | 0.556 | 2.5e-74 | |
| TIGR_CMR|SPO_0231 | 327 | SPO_0231 "alcohol dehydrogenas | 0.941 | 0.788 | 0.521 | 3.7e-64 | |
| TIGR_CMR|SO_0640 | 332 | SO_0640 "alcohol dehydrogenase | 0.941 | 0.777 | 0.457 | 6.6e-58 | |
| UNIPROTKB|F1NUE4 | 337 | TP53I3 "Uncharacterized protei | 0.905 | 0.735 | 0.456 | 4.3e-54 | |
| UNIPROTKB|F1SDJ3 | 332 | TP53I3 "Uncharacterized protei | 0.941 | 0.777 | 0.442 | 8.9e-54 | |
| UNIPROTKB|E2RR83 | 332 | TP53I3 "Uncharacterized protei | 0.941 | 0.777 | 0.446 | 1.1e-53 | |
| UNIPROTKB|Q0VC75 | 332 | TP53I3 "Uncharacterized protei | 0.941 | 0.777 | 0.442 | 2.4e-53 | |
| UNIPROTKB|Q53FA7 | 332 | TP53I3 "Quinone oxidoreductase | 0.941 | 0.777 | 0.438 | 3.8e-53 | |
| TIGR_CMR|GSU_2637 | 328 | GSU_2637 "alcohol dehydrogenas | 0.974 | 0.814 | 0.426 | 5.2e-49 |
| TAIR|locus:2119682 AT4G21580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 203/261 (77%), Positives = 226/261 (86%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVI++PG PEVLQL++V DP++KDDEVLI+V ATALNRADTLQR G Y PP G+SPY
Sbjct: 1 MKAIVISEPGKPEVLQLRDVADPEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSPY 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLECSGTI SVGK VSRWKVGDQVCALL GGGYAEKV+VPAGQ+ P+P+G+SLKDAAAF
Sbjct: 61 LGLECSGTIESVGKGVSRWKVGDQVCALLSGGGYAEKVSVPAGQIFPIPAGISLKDAAAF 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWSTVFM LS GESFL+HGGSSGIGTFAIQ+ K GVRVFVTAGS+EKLA C
Sbjct: 121 PEVACTVWSTVFMMGRLSVGESFLIHGGSSGIGTFAIQIAKHLGVRVFVTAGSDEKLAAC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K+LGADVCINYKTEDFVA+VK ET GKGVDVILDC+GA Y Q+NL SLN DGRL IIG
Sbjct: 181 KELGADVCINYKTEDFVAKVKAETDGKGVDVILDCIGAPYLQKNLDSLNFDGRLCIIGLM 240
Query: 241 GGAKTELNITSLFAKRLTVQG 261
GGA E+ ++SL KRLTV G
Sbjct: 241 GGANAEIKLSSLLPKRLTVLG 261
|
|
| UNIPROTKB|P72043 Rv3777 "Oxidoreductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 152/273 (55%), Positives = 186/273 (68%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V S + L QEV D EVLIKV A+ +NRAD LQ G YPPP G S
Sbjct: 4 MRAVVAE---SSDRLVWQEVPDVSAGPGEVLIKVAASGVNRADVLQAAGKYPPPPGVSDI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLE SG + +VG V+ W G +VCALL GGGYAE VAVPA QVLP+P V+L D+AA
Sbjct: 61 IGLEVSGIVAAVGPGVTEWSAGQEVCALLAGGGYAEYVAVPADQVLPIPPSVNLVDSAAL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEVACTVWS + MT+HL PG+ L+HGG+SGIG+ AIQ+ + RV +TAGS EKL +C
Sbjct: 121 PEVACTVWSNLVMTAHLRPGQLVLIHGGASGIGSHAIQVVRALAARVAITAGSPEKLELC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+DLGA + INY+ EDFVAR+K+ET G G D+ILD MGASY RN+ +L DG+L +IG Q
Sbjct: 181 RDLGAQITINYRDEDFVARLKQETDGSGADIILDIMGASYLDRNIDALATDGQLIVIGMQ 240
Query: 241 GGAKTELNITSLFAKRLTVQGIV----PLISGP 269
GG K ELN+ L KR V G P +SGP
Sbjct: 241 GGVKAELNLGKLLTKRARVIGTTLRARP-VSGP 272
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| TIGR_CMR|SPO_0231 SPO_0231 "alcohol dehydrogenase, zinc-containing" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 136/261 (52%), Positives = 167/261 (63%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ I++PG PEVLQL + P+ +VLIKV +NR D LQR G+Y PP GAS
Sbjct: 5 MRAVEISRPGGPEVLQLTQRPRPEPGHGQVLIKVAYAGVNRPDALQRAGAYDPPPGASDL 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PGLECSG +++VG VGD+VCALL GGGYA+ V PA LPVP G++L++AA
Sbjct: 65 PGLECSGEVVAVGPGAEDVAVGDKVCALLPGGGYADYVVTPAAHCLPVPQGMALREAACL 124
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PE TVWS VF L GE FLVHGGSSGIGT AIQ+ G RVF TAGS++K C
Sbjct: 125 PETFFTVWSNVFTRGGLKAGERFLVHGGSSGIGTTAIQLAHAFGARVFATAGSDDKCRAC 184
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
DLGA+ INY+ EDFV ++ E GG D+ILD +G Y RN+ +L DGRL I
Sbjct: 185 LDLGAERAINYRDEDFVKVMRSE-GG--ADLILDMVGGDYIPRNVKALAEDGRLVQIAFL 241
Query: 241 GGAKTELNITSLFAKRLTVQG 261
G ELN + KRLT+ G
Sbjct: 242 QGPVVELNFALMMVKRLTLTG 262
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| TIGR_CMR|SO_0640 SO_0640 "alcohol dehydrogenase, zinc-containing" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 118/258 (45%), Positives = 158/258 (61%)
Query: 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
I I QPG+PEV+QL P + +VLI+V A +N D QR G+YPPP GAS GL
Sbjct: 11 IHIEQPGAPEVMQLSRSSLPVVGAGQVLIRVSAAGVNGPDLKQRAGAYPPPPGASLILGL 70
Query: 64 ECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
E +G I ++G+ V++W++GD+VCAL+ GGGY E A LP+P G S+ AAA PE
Sbjct: 71 EVAGEICALGEGVTQWQLGDKVCALVPGGGYGEYTLTYAAHCLPIPKGFSMVQAAALPET 130
Query: 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183
TVW +FM + L GE+ L+HGGS GIG+ AI + G +V T G +EK C L
Sbjct: 131 FFTVWGNLFMRAGLKAGETVLIHGGSGGIGSTAIALANRLGAKVIATTGQDEKRDYCLGL 190
Query: 184 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA 243
GAD+ +NY +++FV V T GKGV+V+ D G + NL SL +DGR+ + TQ
Sbjct: 191 GADLVVNYNSQNFVEEVMSFTQGKGVNVVFDIAGGDFINLNLQSLALDGRMVSVSTQRSP 250
Query: 244 KTELNITSLFAKRLTVQG 261
K E+NI L AKR+ G
Sbjct: 251 KAEVNILQLMAKRIVWTG 268
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| UNIPROTKB|F1NUE4 TP53I3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 114/250 (45%), Positives = 154/250 (61%)
Query: 9 PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGT 68
PG PE L ++EV P + EVL+KV A+ALNRAD LQR+G YPPPKG+S GLE +G+
Sbjct: 11 PGGPENLYVKEVMKPHPGEGEVLVKVSASALNRADLLQRRGKYPPPKGSSDILGLEAAGS 70
Query: 69 ILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV 127
+ +G + RWK+GD V ALL GGG AE V VP G ++PVP ++ AAA PE T
Sbjct: 71 VAGLGPGCTGRWKIGDAVMALLSGGGQAEYVTVPEGHLMPVPKDMTFIQAAAIPEAWLTA 130
Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 187
+ + + GE+ L+H G+SG+G AIQ+ + VTAG++EKL + GA
Sbjct: 131 FQLLHFVGKIQKGETVLIHAGASGVGMAAIQLVRLANAIPIVTAGTQEKLQATTNAGAAA 190
Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTEL 247
NYK EDF +V T G GVD+ILDC+G SY+++NL L DGR I G G +
Sbjct: 191 GFNYKNEDFSEKVLAFTQGSGVDIILDCVGGSYWEKNLSCLRTDGRWVIYGLLSGGEVHG 250
Query: 248 NITS-LFAKR 256
++ + L +KR
Sbjct: 251 DLLARLLSKR 260
|
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| UNIPROTKB|F1SDJ3 TP53I3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 116/262 (44%), Positives = 160/262 (61%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L L+EV P + EVL+KV A+ALNRAD LQR+G Y PP GA
Sbjct: 1 MLAVHFDKPGGPENLHLKEVAKPSPGEGEVLLKVVASALNRADLLQRQGHYAPPPGACNI 60
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG ++ +G WK+GD LL GGG A+ V VP G ++P+P+G+++ AAA
Sbjct: 61 LGLEASGHVVELGPGCQGHWKIGDPAMVLLPGGGQAQYVTVPEGFLMPIPAGLTMLQAAA 120
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+S L+H GSSG+GT AIQ+ + G VTAGS+ KL +
Sbjct: 121 IPEAWLTAFQLLHLLGNVQAGDSVLIHAGSSGVGTAAIQLARMAGAIPLVTAGSQHKLQM 180
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 181 AEKLGAAAGFNYKEEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 240
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GGA LF+K L +G
Sbjct: 241 MGGADVS---GPLFSKLLFKRG 259
|
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| UNIPROTKB|E2RR83 TP53I3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 117/262 (44%), Positives = 162/262 (61%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L L+EV P + EVL+KV A+ALNRAD LQR+G Y PP GAS
Sbjct: 1 MLAVHFDEPGGPENLYLKEVAKPSPVEGEVLLKVAASALNRADLLQRQGRYAPPPGASSI 60
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG I +G WK+GD LL GGG A+ V VP ++P+P+G++L AAA
Sbjct: 61 LGLEASGHIAELGPACQGHWKIGDPAMVLLPGGGQAQYVTVPEELLMPIPAGLTLSQAAA 120
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+S L+H G+SG+GT AIQ+ + G VTAGS+ KL +
Sbjct: 121 IPEAWLTAFQLLHLLGNVQAGDSVLIHAGASGVGTAAIQLARMAGAIPLVTAGSQHKLQM 180
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 181 AEKLGAAAGFNYKEEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWILYGL 240
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GG T+++ LF+K L +G
Sbjct: 241 MGG--TDIS-GPLFSKLLFKRG 259
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| UNIPROTKB|Q0VC75 TP53I3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 116/262 (44%), Positives = 160/262 (61%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L L+EV P + EVL+KV A+ALNRAD LQR+G Y PP GAS
Sbjct: 1 MIAVHFDKPGGPENLYLKEVAKPSPGEGEVLLKVAASALNRADLLQRQGQYAPPPGASNI 60
Query: 61 PGLECSGTILSVGKNVSR-WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G W+VGD LL GGG A+ V VPA ++P+P+G+++ AAA
Sbjct: 61 LGLEASGHVAELGAGCQGPWRVGDPAMVLLSGGGQAQYVTVPAELLMPIPAGLTMCQAAA 120
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+S L+H G+SG+GT AIQ+ + G VTAGS+EKL +
Sbjct: 121 IPEAWLTAFQLLHLVGNVQAGDSVLIHAGASGVGTAAIQLARMAGATPLVTAGSQEKLQI 180
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DG + G
Sbjct: 181 AEKLGAAAGFNYKEEDFSEATLKLTKGAGVNLILDCIGGSYWEKNVNCLALDGHWVLYGL 240
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GGA LF+K L +G
Sbjct: 241 LGGAVIS---GPLFSKLLFKRG 259
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| UNIPROTKB|Q53FA7 TP53I3 "Quinone oxidoreductase PIG3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 115/262 (43%), Positives = 161/262 (61%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 60
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 61 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 120
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+ L+H G SG+GT AIQ+ + G VTAGS++KL +
Sbjct: 121 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 180
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 181 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 240
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GG ++N LF+K L +G
Sbjct: 241 MGGG--DIN-GPLFSKLLFKRG 259
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| TIGR_CMR|GSU_2637 GSU_2637 "alcohol dehydrogenase, zinc-containing" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 116/272 (42%), Positives = 160/272 (58%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+++ G +VL++ E E P+ + +VL+KV AT++NR D +QR+G YPPP G S
Sbjct: 1 MKAVLLDGFGGLDVLKVGEAERPKPAEGQVLVKVVATSVNRPDLVQREGKYPPPPGDSEI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLE SGTI +G V+ W+VGD+V +L+GGGGYAE A ++ +P +S ++AA
Sbjct: 61 LGLEVSGTIEELGPGVTGWQVGDRVMSLVGGGGYAEYAVAYASHLMRIPESMSFEEAACV 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC--QGVRVFVTAGSEEKLA 178
E T + VFM L S ++HGG G+ T IQ+ K ++ TA K+
Sbjct: 121 CESYITAFLNVFMIGGLKDNNSVILHGGGGGVNTAGIQLCKALVPNTKIVATA-HPSKID 179
Query: 179 VCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
K LGAD+ +++ +T DF VKE T KGVDVILD +GA Y N+ SL GRL II
Sbjct: 180 RVKALGADLVVDFTQTPDFSEAVKEFTNKKGVDVILDHVGAKYLAPNMNSLAYAGRLVII 239
Query: 238 GTQGGAKTELNITSLFAKRLTVQGIVPLISGP 269
G G K ELN+ + KR + G V L S P
Sbjct: 240 GVISGIKAELNLALMMVKRQQIIGSV-LRSRP 270
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | grail3.0093007001 | hypothetical protein (325 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.28930002 | annotation not avaliable (211 aa) | • | • | • | 0.493 | |||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 274 | |||
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 1e-162 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 1e-146 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 4e-99 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 2e-98 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 8e-85 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 4e-80 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 4e-77 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 8e-73 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 9e-68 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 7e-67 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 2e-65 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 5e-65 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 1e-63 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 9e-60 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 2e-58 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 4e-58 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 2e-54 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 8e-53 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 6e-51 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 1e-49 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 2e-49 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 1e-48 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 3e-48 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 9e-48 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 1e-47 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 8e-46 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 2e-43 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 3e-43 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 3e-43 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 2e-40 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 3e-38 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 3e-38 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 4e-37 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 3e-35 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 2e-34 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 2e-34 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 2e-34 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 4e-34 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 7e-34 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 7e-34 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 5e-33 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 5e-33 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 2e-32 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 8e-32 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 2e-31 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 1e-30 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 1e-30 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 2e-30 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 1e-29 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 7e-29 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 9e-29 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 1e-28 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 2e-28 | |
| cd08291 | 324 | cd08291, ETR_like_1, 2-enoyl thioester reductase ( | 7e-27 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 1e-26 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 2e-26 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 8e-25 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 1e-24 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 8e-24 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 6e-23 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 5e-22 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 2e-21 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 6e-21 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 6e-21 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 9e-21 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 1e-20 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 2e-20 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 4e-20 | |
| TIGR02817 | 336 | TIGR02817, adh_fam_1, zinc-binding alcohol dehydro | 9e-20 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 2e-18 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 3e-18 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 3e-18 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 3e-17 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 3e-17 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 7e-17 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 1e-16 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 1e-16 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 6e-16 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 1e-15 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 2e-15 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 4e-15 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 4e-15 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 7e-15 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 1e-14 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 1e-14 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 4e-14 | |
| cd08294 | 329 | cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun | 4e-14 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 5e-14 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 3e-13 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 3e-12 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 7e-12 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 2e-11 | |
| cd08295 | 338 | cd08295, double_bond_reductase_like, Arabidopsis a | 1e-10 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 1e-10 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 3e-10 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 3e-10 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 4e-10 | |
| pfam13602 | 129 | pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas | 5e-10 | |
| TIGR02825 | 325 | TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy | 2e-09 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 2e-09 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 4e-09 | |
| PLN03154 | 348 | PLN03154, PLN03154, putative allyl alcohol dehydro | 2e-08 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 3e-08 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 5e-08 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 1e-07 | |
| cd08293 | 345 | cd08293, PTGR2, Prostaglandin reductase | 4e-07 | |
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 1e-06 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 1e-06 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 2e-06 | |
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 7e-06 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 1e-05 | |
| cd08238 | 410 | cd08238, sorbose_phosphate_red, L-sorbose-1-phosph | 2e-05 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 2e-05 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 1e-04 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 3e-04 | |
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 3e-04 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 0.001 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 453 bits (1169), Expect = e-162
Identities = 158/261 (60%), Positives = 187/261 (71%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVI +PG PEVL+L EV P EVLI+V A +NRAD LQR+G YPPP GAS
Sbjct: 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLE +G +++VG V+ WKVGD+VCALL GGGYAE V VPAGQ+LPVP G+SL +AAA
Sbjct: 61 LGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAAL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PEV T W +F L GE+ L+HGG+SG+GT AIQ+ K G RV TAGSEEKL C
Sbjct: 121 PEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+ LGADV INY+TEDF VKE TGG+GVDVILD +G Y RNL +L DGRL +IG
Sbjct: 181 RALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL 240
Query: 241 GGAKTELNITSLFAKRLTVQG 261
GGAK EL++ L KRLT+ G
Sbjct: 241 GGAKAELDLAPLLRKRLTLTG 261
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 412 bits (1061), Expect = e-146
Identities = 163/261 (62%), Positives = 192/261 (73%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAI IT+PG PEVL L EV P K EVLI+V A +NR D LQR G YPPP GAS
Sbjct: 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLE +G +++VG+ VSRWKVGD+VCAL+ GGGYAE VAVPAGQVLPVP G+SL +AAA
Sbjct: 61 LGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAAL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PE TVWS +F L GE+ L+HGG+SGIGT AIQ+ K G RVF TAGS+EK A C
Sbjct: 121 PETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC 180
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+ LGAD+ INY+ EDFV VK ETGGKGVDVILD +G SY RN+ +L +DGR+ IG Q
Sbjct: 181 EALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240
Query: 241 GGAKTELNITSLFAKRLTVQG 261
GG K EL++ L AKRLT+ G
Sbjct: 241 GGRKAELDLGPLLAKRLTITG 261
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 292 bits (750), Expect = 4e-99
Identities = 122/266 (45%), Positives = 168/266 (63%), Gaps = 4/266 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+V+ + G PEVL++ EV +P+ EVL++V+A +N D L R+G PP +
Sbjct: 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDA 117
PG E +G +++VG V+ +KVGD+V AL G GGYAE V VPA ++P+P G+S ++A
Sbjct: 61 PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEA 120
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA P T W +F + L PGE+ LVHG + G+G+ AIQ+ K G V S EKL
Sbjct: 121 AALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKL 180
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ K+LGAD INY+ EDFV +V+E TGGKGVDV+LD +G F +L +L GRL I
Sbjct: 181 ELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI 240
Query: 238 G-TQGGAKTELNITSLFAKRLTVQGI 262
G GG LN+ L KRLT++G+
Sbjct: 241 GALSGGPPVPLNLLPLLGKRLTLRGV 266
|
Length = 326 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 2e-98
Identities = 112/261 (42%), Positives = 156/261 (59%), Gaps = 2/261 (0%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + G +VL++ E P K ++VLIKV A +NRADTLQR+G YPPP G+S
Sbjct: 2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLE +G + VG +V R+K GD+V ALL GGGYAE G V+ +P G + ++AAA
Sbjct: 62 LGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAI 121
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PE T W + + G+S L+H G+SG+GT A Q+ + G +T SEEK+ C
Sbjct: 122 PEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181
Query: 181 KDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
K L A + I Y E F +VK+ TG KGV+++LDC+G SY L +DG+ + G
Sbjct: 182 KKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF 241
Query: 240 QGGAKTE-LNITSLFAKRLTV 259
GGAK E N+ L KR ++
Sbjct: 242 MGGAKVEKFNLLPLLRKRASI 262
|
Length = 334 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 8e-85
Identities = 113/265 (42%), Positives = 155/265 (58%), Gaps = 8/265 (3%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY---PPPKGA 57
MKA+V + G PE L L+EV EV I+VEA +N D L +G Y PP
Sbjct: 1 MKAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPL--- 57
Query: 58 SPY-PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
P+ PG E +G + +VG+ V+ +KVGD+V AL G GG+AE+V VPA V P+P G+S ++
Sbjct: 58 -PFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEE 116
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
AAA P T + + + L PGE+ LV G + G+G A+Q+ K G RV A SEEK
Sbjct: 117 AAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK 176
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
LA+ + LGAD I+Y+ D RVK TGG+GVDV+ D +G F+ +L SL GRL +
Sbjct: 177 LALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLV 236
Query: 237 IGTQGGAKTELNITSLFAKRLTVQG 261
IG G ++ L K ++V G
Sbjct: 237 IGFASGEIPQIPANLLLLKNISVVG 261
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 243 bits (624), Expect = 4e-80
Identities = 97/259 (37%), Positives = 138/259 (53%), Gaps = 4/259 (1%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
KA+ I + G PEVL+ ++V P+ EVL++ A +N DT R G YP P P+
Sbjct: 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL---PFV 57
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
G+E +G + +VG V+ +KVGD+V G YAE VPA +++ +P G+S + AAA
Sbjct: 58 LGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAAL 117
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
T + T + PG++ LVH + G+G Q K G V T SEEK +
Sbjct: 118 LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+ GAD INY+ EDFV RV+E TGG+GVDV+ D +G F+ +L SL G L G
Sbjct: 178 RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNA 237
Query: 241 GGAKTELNITSLFAKRLTV 259
G ++ L L +
Sbjct: 238 SGPVPPFDLLRLSKGSLFL 256
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 4e-77
Identities = 111/288 (38%), Positives = 163/288 (56%), Gaps = 27/288 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+VI G PEVL+ ++ +P+ DEVL++V+A ALN D R+G
Sbjct: 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLG---GGG 93
G + +G + +VG V+ K G +V CA +LG GG
Sbjct: 61 LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGG 120
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
YAE VAVPA +LP+P +S ++AAA P T W + + L PGE+ LVHG SG+G
Sbjct: 121 YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG 180
Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
+ AIQ+ K G V TAGSE+KL K+LGAD I+Y+ EDFV V+E TG +GVDV++
Sbjct: 181 SAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVV 240
Query: 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+ +GA+ ++++L SL GRL G G + +++ +F ++L++ G
Sbjct: 241 EHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILG 288
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 8e-73
Identities = 98/269 (36%), Positives = 148/269 (55%), Gaps = 8/269 (2%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+AI + G+P+VL+L ++ P EVL++V A+ +N DT R G+YP PY
Sbjct: 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGL-PPLPY 59
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
PG + +G + +VG+ V KVGD+V G G AE V VPA Q++P+P GVS
Sbjct: 60 VPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSF 119
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
+ AA A T + +F + GE+ LVHGGS +G A+Q+ + G RV TA S
Sbjct: 120 EQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSA 179
Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
E + + GAD NY+ ED R+ T G+GVDVI++ + ++L L GR+
Sbjct: 180 EGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRI 239
Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQGIV 263
+ G+ GG + + I L AK +++G++
Sbjct: 240 VVYGS-GGLRGTIPINPLMAKEASIRGVL 267
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 9e-68
Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+ I + G PEVL+L +V P+ EVL+KV A +N D R+G +
Sbjct: 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60
Query: 61 --PGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLK 115
PG + +G +++VG V+ +KVGD+V + GG YAE V VPA ++ P+ +S +
Sbjct: 61 LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFE 120
Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
+AAA P T W +F L G++ L+HG + G+G+FA+Q+ K +G RV TA S
Sbjct: 121 EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAA 179
Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
+ LGAD I+Y DF GVD +LD +G R+L + GRL
Sbjct: 180 NADFLRSLGADEVIDYTKGDFE----RAAAPGGVDAVLDTVGGETLARSLALVKPGGRL 234
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 210 bits (538), Expect = 7e-67
Identities = 95/284 (33%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA ++ G + L+L E P+ EVL++V A +LN D L G YPPP
Sbjct: 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCAL------------------LGG---GGYAEKVA 99
P + +G +++VG+ V+R+KVGD+V LGG G AE V
Sbjct: 61 PLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVV 120
Query: 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159
+P ++ P +S ++AA P T W+ +F L PG++ LV G + G+ FA+Q
Sbjct: 121 LPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQF 179
Query: 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGA 218
K G RV T+ S+EKL K LGAD INY+T D+ V + TGG+GVD +++ G
Sbjct: 180 AKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGP 239
Query: 219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
+++ ++ G + +IG G + + + L K T++GI
Sbjct: 240 GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGI 283
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 206 bits (527), Expect = 2e-65
Identities = 100/266 (37%), Positives = 136/266 (51%), Gaps = 5/266 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ Q G PEVL+++E+ P EVLI+VEA LNRAD + R+G+Y P
Sbjct: 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPAR 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC----ALLG-GGGYAEKVAVPAGQVLPVPSGVSLK 115
G E +G + +VG V+ + VGD+V A LG G YAE VPA V+ +P G+S
Sbjct: 61 LGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFV 120
Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
+AAA T + + + L PG+S L+ SS +G AIQ+ G V T + E
Sbjct: 121 EAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE 180
Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
K LGA I ED VA V TGGKGVDV+ D +G F + +L G L
Sbjct: 181 KRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV 240
Query: 236 IIGTQGGAKTELNITSLFAKRLTVQG 261
+ G G T + + K LT +G
Sbjct: 241 VYGALSGEPTPFPLKAALKKSLTFRG 266
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 5e-65
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 7/240 (2%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASPY 60
+A+V+T G + L++++ P+ EV ++VEA LN AD + R+G Y PK P+
Sbjct: 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKP--PF 58
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
PG EC+GT+ +VG+ V +KVGD+V L GGYAE V VPA QV P+P G+S ++AAA
Sbjct: 59 VPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAA 118
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLA 178
FP T + +F +L PG+S LVH + G+G A Q+ K V V TA S K
Sbjct: 119 FPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHE 177
Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
K+ G I+Y+T+D+V VK+ + +GVD++LD +G +++ L GRL + G
Sbjct: 178 ALKENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYG 236
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 1e-63
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 20/279 (7%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+V+ G PEV +L+EV PQ +VL++V A+ +N DT R+G P
Sbjct: 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR---PPL 57
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGV 112
P G + +G + +VG+ V+R++VGD+V GG G AE V A + P+ +
Sbjct: 58 PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANL 117
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
S+++AAA P V T W + + + G++ L+HGG+ G+G A+Q+ K G RV+ TA
Sbjct: 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATAS 177
Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
S EK A + LGAD I Y E V V E TGG+G DV+ D +G + ++ + G
Sbjct: 178 S-EKAAFARSLGADP-IIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYG 235
Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQGI---VPLISG 268
R+ I ++ L + T G+ +PL++G
Sbjct: 236 RVVSILG----GATHDLAPLSFRNATYSGVFTLLPLLTG 270
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 9e-60
Identities = 95/244 (38%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 4 IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASP 59
+V T+ GSPEVL L EVE P K EVL+KV A ++N D R+G + P
Sbjct: 1 VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKD 116
PG++ +G +++VG V+R+KVGD+V L GGG AE V P + P GVS ++
Sbjct: 61 IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEE 120
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
AAA P T + + PG+ L++G S G+GTFA+Q+ K G V S
Sbjct: 121 AAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVC-STRN 179
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRL 234
+ + LGAD I+Y TEDFVA GG+ DVI D +G S F R +L GR
Sbjct: 180 AELVRSLGADEVIDYTTEDFVA---LTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRY 236
Query: 235 FIIG 238
+G
Sbjct: 237 VSVG 240
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 2e-58
Identities = 92/241 (38%), Positives = 132/241 (54%), Gaps = 7/241 (2%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ +PG+ L L+E+E P EVL+KV A LN D P P+
Sbjct: 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWS--YPH 58
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
PG++ +G +++VG V+ WKVGD+V +L GG +AE V A VLP+P +S ++
Sbjct: 59 VPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEE 118
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
AAA P T + +F + G + L+ GG+ G+G+FA+Q+ K G+RV T S+
Sbjct: 119 AAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRN 177
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
K LGAD I+Y ED R+KE TGG+GVD +LD +G +L +G L
Sbjct: 178 FEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC 237
Query: 237 I 237
I
Sbjct: 238 I 238
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 186 bits (474), Expect = 4e-58
Identities = 93/257 (36%), Positives = 130/257 (50%), Gaps = 26/257 (10%)
Query: 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88
EVL++VEA L D R+G YPPP G E +G ++ VG V+ KVGD+V L
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60
Query: 89 LGG-----------------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
GG+AE V VPA ++P+P G+SL++AA PE
Sbjct: 61 PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120
Query: 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
T + + L PG++ LV G G+G A Q+ K G RV VT S+EKL + K+LGA
Sbjct: 121 TAYHALRRAGVLKPGDTVLVLGAG-GVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGA 179
Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAK 244
D I+YK ED ++ TGG G DV++D +G + L L GR+ ++G G
Sbjct: 180 DHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP 238
Query: 245 TELNITSLFAKRLTVQG 261
++ L K LT+ G
Sbjct: 239 PLDDLRRLLFKELTIIG 255
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 2e-54
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA 87
DEV ++V+A LN D L G P GLECSG + VG V+ KVGD+V
Sbjct: 1 DEVEVEVKAAGLNFRDVLVALGLLPGD---ETPLGLECSGIVTRVGSGVTGLKVGDRVMG 57
Query: 88 LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
L G +A V V A V+ +P +S ++AA P T + + + L GES L+H
Sbjct: 58 L-APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHA 116
Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINY-KTEDFVARVKEETG 205
+ G+G AIQ+ + G VF T GSEEK ++LG V I + F + TG
Sbjct: 117 AAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATG 176
Query: 206 GKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
G+GVDV+L+ + + + L GR IG
Sbjct: 177 GRGVDVVLNSLSGELLRASWRCLAPFGRFVEIG 209
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 8e-53
Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 12/249 (4%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAIVI QPG PEVL+L+E+ P+ K VLI+V+A LNR++ R+G P K
Sbjct: 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFP-RV 59
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSGVSL 114
G+E G + + G +V +GG G YAE VP QV + S +S
Sbjct: 60 LGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSW 117
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
+ AA PE T W ++F + L PG++ L+ GG+S +G A+++ K G V T S
Sbjct: 118 AELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSP 177
Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
E+ A+ K+LGAD + +++ G D +L+ +G + + +L L G +
Sbjct: 178 ERAALLKELGADEVV-IDDGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRPGGIV 234
Query: 235 FIIGTQGGA 243
+ G GG
Sbjct: 235 CMTGLLGGQ 243
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 6e-51
Identities = 75/209 (35%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG 91
I+V A LN D L G YP G EC+G + VG V+ VGD+V L
Sbjct: 1 IEVRAAGLNFRDVLIALGLYPGEAV----LGGECAGVVTRVGPGVTGLAVGDRVMGL-AP 55
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
G +A +V A V+P+P G S ++AA P V T + + + L PGES L+H + G
Sbjct: 56 GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGG 115
Query: 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVCINYKTEDFVARVKEETGGKGV 209
+G AIQ+ + G VF TAGS EK + LG D + + F + TGG+GV
Sbjct: 116 VGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSFADEILRATGGRGV 175
Query: 210 DVILDCMGASYFQRNLGSLNIDGRLFIIG 238
DV+L+ + + +L L GR IG
Sbjct: 176 DVVLNSLSGEFLDASLRCLAPGGRFVEIG 204
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 1e-49
Identities = 82/218 (37%), Positives = 115/218 (52%), Gaps = 9/218 (4%)
Query: 21 EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVS 77
E EV I+V A +LN D L +G YP PYP G E SG + +VG +V+
Sbjct: 1 EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP---TMPPYPFTPGFEASGVVRAVGPHVT 57
Query: 78 RWKVGDQVCALLGG--GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
R VGD+V A G GG+A V VP QV+ P+ +S ++A A P V TV F +
Sbjct: 58 RLAVGDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDA-FARA 116
Query: 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 195
L+ GE L+ + G G A+Q+ + +G ++ TA S++KL K LG INY ED
Sbjct: 117 GLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEED 176
Query: 196 FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 233
F + TGG+GVDV+++ + Q+ L L GR
Sbjct: 177 FEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGR 214
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 2e-49
Identities = 98/291 (33%), Positives = 138/291 (47%), Gaps = 41/291 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+++EV P+ EVLIKVEA + D KG +P PK P
Sbjct: 4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKL--PL 59
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQV--------------C----------ALLGG---- 91
PG E GT++ VG+ V+ KVGD+V C + G
Sbjct: 60 IPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTD 119
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
GGYAE V VPA V+ +P G+ L +AA T + + +++ PG+ V G + G
Sbjct: 120 GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKWVAVVG-AGG 177
Query: 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211
+G A+Q K G V SEEKL + K LGAD IN D + VKE D
Sbjct: 178 LGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI-----ADA 232
Query: 212 ILDCMGASYFQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQG 261
I+D +G + + +L +L G L ++G GG L L K +++ G
Sbjct: 233 IIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVG 283
|
Length = 339 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-48
Identities = 97/291 (33%), Positives = 137/291 (47%), Gaps = 38/291 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA ++ +P P LQ++EV DP+ EVLIKV+A + D L KG +P +G P
Sbjct: 1 MKAAILHKPNKP--LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP--RGKYPL 56
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQV---------------------C---ALLGG---G 92
G E GT+ VG+ V R+K GD+V C A G G
Sbjct: 57 ILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDG 116
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
G+AE V VP ++ +P VS + AA V T + + G++ LV G G+
Sbjct: 117 GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAG-VKKGDTVLVTGAGGGV 175
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
G AIQ+ K G RV S EKL + K+LGAD I+ F VK+ G DV+
Sbjct: 176 GIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVID--GSKFSEDVKKLG---GADVV 230
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
++ +G+ + +L SLN GRL +IG L L K + + G +
Sbjct: 231 IELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSI 281
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 3e-48
Identities = 79/233 (33%), Positives = 114/233 (48%), Gaps = 23/233 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V+T PG ++ + +V P+ DEVL+KV+A ALN D + + P A
Sbjct: 1 QKAAVLTGPGGGLLV-VVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPA--I 57
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVPSGV 112
G + +GT++ VG V+R+KVGD+V + G G + E V A +P +
Sbjct: 58 LGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNI 117
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHL----------SPGESFLVHGGSSGIGTFAIQMGKC 162
S ++AA P T +F L S G+ L+ GGSS +GT AIQ+ K
Sbjct: 118 SFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKL 177
Query: 163 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215
G +V TA S + + K LGAD +Y D V ++ TGGK + LDC
Sbjct: 178 AGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK-LRYALDC 228
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 9e-48
Identities = 83/240 (34%), Positives = 116/240 (48%), Gaps = 27/240 (11%)
Query: 1 MKAIVITQPGSPEVLQ-LQEVEDPQI-KDDEVLIKVEATALNRADTLQRKG--------- 49
MKA I G + L L+ P I K ++VLIKV A ++N D L R G
Sbjct: 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKK 60
Query: 50 SYPPPKGASPY-----PGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVP 101
P S G +CSG ++ +G V +++GD+V + G +AE V VP
Sbjct: 61 RKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVP 120
Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAI 157
+V P +S ++AA+ P T WS + L+P G+ L+ GGS G+GTFAI
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAI 180
Query: 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
Q+ K G V T S + + + K LGAD I+Y EDF + E DVILD +G
Sbjct: 181 QLLKAWGAHVTTTC-STDAIPLVKSLGADDVIDYNNEDFEEELTERG---KFDVILDTVG 236
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-47
Identities = 75/238 (31%), Positives = 127/238 (53%), Gaps = 5/238 (2%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+ +V+T+ G PEVL++ E + P+ EV++KVEA+ ++ AD R+G YP
Sbjct: 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFT 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG + G + ++G V+ ++VGD+V AL GG AE + + A ++PVP GV +A
Sbjct: 61 PGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCL 120
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
T + + + + G+ L+HG S G+G +++ G V+ TA SE A
Sbjct: 121 VLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAAL 179
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
++LGA I+Y+T+D++ + GVDV+ D +G ++ + +L G L G
Sbjct: 180 RELGA-TPIDYRTKDWLPAMLTP---GGVDVVFDGVGGESYEESYAALAPGGTLVCYG 233
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 8e-46
Identities = 86/262 (32%), Positives = 121/262 (46%), Gaps = 6/262 (2%)
Query: 4 IVITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASP 59
+V TQ G P VL+L + P EVL+++ A +N +D + G+Y PP A P
Sbjct: 1 VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVP 60
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
G E G ++ VG VS VG +V L G G + E V PA ++PVP +S + AA
Sbjct: 61 --GNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAM 118
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
T W + L PG+ + + +S +G IQ+ K G + +E++
Sbjct: 119 LYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE 178
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
K LGAD I+ ED RVKE TGG G + LD +G R SL G L G
Sbjct: 179 LKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGL 238
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
G + K +TV+G
Sbjct: 239 LSGEPVPFPRSVFIFKDITVRG 260
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 2e-43
Identities = 91/269 (33%), Positives = 133/269 (49%), Gaps = 5/269 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASP 59
M+AI + + G PEVL ++V DP +V I V A ++ DT R G P P P
Sbjct: 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELP 60
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKD 116
Y PG E +G + +VG V +G +V A G GGGYAE + PVP G+ L+
Sbjct: 61 YVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEA 120
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
A A T + + L+PG+ LV + G+G+ +Q+ K G V AG K
Sbjct: 121 AVAVVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAK 179
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
A+ + LGADV ++Y D+ +V+E GG GV V+LD +G + + L L GR
Sbjct: 180 TALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT 239
Query: 237 IGTQGGAKTELNITSLFAKRLTVQGIVPL 265
G G T L+ + +TV G++ +
Sbjct: 240 YGWASGEWTALDEDDARRRGVTVVGLLGV 268
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 3e-43
Identities = 94/269 (34%), Positives = 131/269 (48%), Gaps = 8/269 (2%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
K I + G PEVLQ E ++EV ++ +A +N DT R G YPPP S
Sbjct: 3 KRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGL- 61
Query: 62 GLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
G E +G + VG V KVGD+V A G Y+ VPA + +P +S + AAA
Sbjct: 62 GTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAAS 121
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
TV+ + T + P E FL H + G+G A Q K G ++ T GS +K
Sbjct: 122 FLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA 181
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K GA INY+ E+ V RVKE TGGK V V+ D +G ++ +L L G + G
Sbjct: 182 KKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNA 241
Query: 241 GGAKTELNIT------SLFAKRLTVQGIV 263
G T +N+ SL+ R ++QG +
Sbjct: 242 SGPVTGVNLGILNQKGSLYVTRPSLQGYI 270
|
Length = 327 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 3e-43
Identities = 95/304 (31%), Positives = 144/304 (47%), Gaps = 46/304 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR---KGSYPPPKGA 57
MKA+V+T PG L+ +++ P+ EVL+KV+A + +D + R G+Y PP
Sbjct: 1 MKALVLTGPG---DLRYEDIPKPEPGPGEVLVKVKACGICGSD-IPRYLGTGAYHPPL-- 54
Query: 58 SPYPGLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLGG-- 91
G E SGT+ VG V VGD+V C+ +G
Sbjct: 55 --VLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRR 112
Query: 92 -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G +AE V+VPA ++ +P V + AA E A V + ++ G++ +V G +
Sbjct: 113 DGAFAEYVSVPARNLIKIPDHVDY-EEAAMIEPAAVALHAVRLA-GITLGDTVVVIGAGT 170
Query: 151 GIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
IG AIQ K G RV +EKLAV ++LGAD IN K ED V +V+E T G+G
Sbjct: 171 -IGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGA 228
Query: 210 DVILDCMGASYFQRN-LGSLNIDGRLFIIGTQGG--AKTELNITSLFAKRLTVQGIVPLI 266
D++++ G+ L G++ ++G G +E + K LT+QG
Sbjct: 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSY 288
Query: 267 SGPW 270
S P+
Sbjct: 289 SAPF 292
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 2e-40
Identities = 102/295 (34%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+V T PG V +L+EV +P+ EVLIKV A + +D KG Y P +
Sbjct: 1 MKALVKTGPGPGNV-ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVE----T 55
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV----------------------CA---LLG-- 90
P G E SGTI+ VG +V WKVGD+V C +G
Sbjct: 56 PVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ 115
Query: 91 -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
GG+AE V VP + +P +SL +AAA E V S + PG++ +V G
Sbjct: 116 ADGGFAEYVLVPEESLHELPENLSL-EAAALTEPLAVAVHAVAERSGIRPGDTVVVF-GP 173
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGS--EEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207
IG A Q+ K QG V V E +L V K+LGAD +N ED V E T G
Sbjct: 174 GPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA-VNGGEEDLAELVNEITDGD 232
Query: 208 GVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
G DV+++C GA ++ L L GR+ +G G +++ + K L+V G
Sbjct: 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIG 287
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 3e-38
Identities = 90/299 (30%), Positives = 137/299 (45%), Gaps = 48/299 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ P ++L+EV P+ EVL+KV A + D + +G + K
Sbjct: 1 MKAAVLHGPN---DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLK-PPRI 56
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCA------------LLG---------------GGG 93
G E +G I+ VG V+ +KVGD+V L G GG
Sbjct: 57 LGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGG 116
Query: 94 YAEKVAVPA-----GQVLPVPSGVSLKDAAAFPEVACTV--WSTVFMTSHLSPGESFLVH 146
+AE V VPA G VL +P VS ++AA +AC + + + PG++ LV
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQR----KAGIKPGDTVLVI 172
Query: 147 GGSSG-IGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204
G +G IG + K G +V V+ +E +L K LGAD I+ ED V +V+E T
Sbjct: 173 G--AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT 230
Query: 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGR-LFIIGTQGGAKTELNITSLFAKRLTVQG 261
G+G DV++ G+ + L + GR LF G G+ ++ + + +T+ G
Sbjct: 231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITG 289
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 3e-38
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 43/290 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD--TLQRKGSYPPPKGAS 58
MKA+V + G E L++++V+DP+ EVLI+V+ +N D + P P
Sbjct: 1 MKALVFEKSGI-ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPH--- 56
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQV----------CALL----------GG------- 91
PG E +G + VG +V K GD+V C + GG
Sbjct: 57 -IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSN 115
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
GGYAE + VP + +P +S + AA+ P A T + + L PGE+ +V G S
Sbjct: 116 GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAG-LGPGETVVVFGASGN 174
Query: 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211
G FA+Q+ K G V + + K+ GAD ++Y ++ +VKE T K DV
Sbjct: 175 TGIFAVQLAKMMGAEVIAVSRKD----WLKEFGADEVVDY--DEVEEKVKEIT--KMADV 226
Query: 212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+++ +G+S++ +L L GRL GT G + +L+++ L++K++++ G
Sbjct: 227 VINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIG 276
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 4e-37
Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G + ++++V P+ EVL+K+EA+ + D G +P
Sbjct: 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------C----------------ALLGG----G 92
G E +G +++VG VS KVGD+V C G G
Sbjct: 60 GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDG 119
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
+AE A V P+P G+S + AA + C TV+ + + L PG+ ++ G
Sbjct: 120 TFAEYAIADARYVTPIPDGLSFEQAAP---LLCAGVTVYKAL-KKAGLKPGDWVVISGAG 175
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
G+G +Q K G+RV +EKL + K+LGAD +++K D V VKE TGG G
Sbjct: 176 GGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235
Query: 210 D-VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
V++ + A+ +++ L L G L +G G L+ L + +T+ G
Sbjct: 236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVG 288
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 3e-35
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 67/304 (22%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+V +PG L++ ++ +P EVL++V+ + +D Y G +P+
Sbjct: 1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDL----HIY---HGRNPF 50
Query: 61 ------PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG 90
G E SG ++ VG+ V+ KVGD+V +LG
Sbjct: 51 ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG 110
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC-TVWSTVFMTSHLSPGESFLVH 146
GG+AE + VPA L VP G+SL AA V + + + ++ G++ LV
Sbjct: 111 VHRDGGFAEYIVVPA-DALLVPEGLSLDQAAL---VEPLAIGAHAVRRAGVTAGDTVLVV 166
Query: 147 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
G + IG IQ+ K +G RV V +E+L ++LGAD IN ED AR++E T G
Sbjct: 167 G-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDG 225
Query: 207 KGVDVILDCMGASYFQRNLGSLN--ID-----GRLFIIGTQGGAKTELNI-TSLFAKR-L 257
+G DV++D G N S+ ++ GR+ ++G +K + F K+ L
Sbjct: 226 EGADVVIDATG------NPASMEEAVELVAHGGRVVLVGL---SKGPVTFPDPEFHKKEL 276
Query: 258 TVQG 261
T+ G
Sbjct: 277 TILG 280
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 78/277 (28%), Positives = 121/277 (43%), Gaps = 44/277 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA + + G P L+L++V P+ +VL++V + +D G G PY
Sbjct: 1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDG---VWGGILPY 55
Query: 61 -----PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG- 90
G E +G + VG V K GD V C G
Sbjct: 56 KLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI 115
Query: 91 --GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV-FMTSHLSPGESFLVHG 147
GG+AE + VP+ +++ +P G+ +AA + T + V +L PG + +V G
Sbjct: 116 GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIG 175
Query: 148 -GSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+G A+Q+ + V SEE L + + LGAD +N ++D V V+E TG
Sbjct: 176 VG--GLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN-ASDDVVEEVRELTG 232
Query: 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG 241
G+G D ++D +G+ L GR I+G G
Sbjct: 233 GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGG 269
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 2e-34
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 17/228 (7%)
Query: 1 MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
MKAI TQP P+ L E+ P ++L++VEA ++N DT R G P P
Sbjct: 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPG-- 58
Query: 58 SPY-PGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVS 113
P G + SG + +VG V+ +KVGD+V + G AE V V P +S
Sbjct: 59 QPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLS 118
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSSGIGTFAIQMGKC-QGVRV 167
+AAA P + T W +F +S G++ L+ GG+ G+G+ AIQ+ K G+ V
Sbjct: 119 FAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTV 178
Query: 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215
TA E +A K+LGAD IN+ +D ++ E G + VD I
Sbjct: 179 IATASRPESIAWVKELGADHVINHH-QDLAEQL-EALGIEPVDYIFCL 224
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 90/298 (30%), Positives = 137/298 (45%), Gaps = 46/298 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A V + G P L+++EV DP+ D V+++VEA + R+D +G P P+
Sbjct: 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGH--DPDVTLPH 56
Query: 61 -PGLECSGTILSVGKNVSRWKVGD---------------------QVCA------LLGGG 92
PG E +G ++ VG++VSRW+VGD VC G
Sbjct: 57 VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPG 116
Query: 93 GYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHG 147
+AE VAVP V + +P V AA + C T + + + + PGE VHG
Sbjct: 117 SFAEYVAVPRADVNLVRLPDDVDFVTAAG---LGCRFATAFRALVHQARVKPGEWVAVHG 173
Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGG 206
G+G A+ + G RV ++KL + ++LGA +N + ED A V++ TGG
Sbjct: 174 CG-GVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG 232
Query: 207 KGVDVILDCMGASYFQRN-LGSLNIDGRLFIIG--TQGGAKTELNITSLFAKRLTVQG 261
G V +D +G RN + SL GR +G A L + + A+ L + G
Sbjct: 233 -GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVG 289
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 4e-34
Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 43/268 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+++ +++EV DP+ DEV+IKV L D LQ +G YP K Y
Sbjct: 1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMK----Y 54
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCALL-----------GG--------------- 91
P G E GT+ VG+NV +K GD+V +LL G
Sbjct: 55 PVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEEL 114
Query: 92 -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G +AE V ++ VP VS + A P V V+ + + GE+ LV G
Sbjct: 115 DGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAG-VKKGETVLVTGAGG 173
Query: 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
G+G AIQ+ K G +V SE K + V + K + V ++ G D
Sbjct: 174 GVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKI------GGAD 227
Query: 211 VILDCMGASYFQRNLGSLNIDGRLFIIG 238
++++ +G + +L SLN+ G++ IG
Sbjct: 228 IVIETVGTPTLEESLRSLNMGGKIIQIG 255
|
Length = 334 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 7e-34
Identities = 86/300 (28%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G ++L+E P +VLI+V AT + +D +G P
Sbjct: 1 MKAAVVYVGG--GDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDII 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLG------------------------------ 90
G E G ++ VG V +KVGD+V
Sbjct: 59 LGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGG 117
Query: 91 --GGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
GG+AE V VPA + +P G+ +AAA E T + + + PG + +V G
Sbjct: 118 GIDGGFAEYVRVPADFNLAKLPDGIDE-EAAALTEPLATAYHGHAERAAVRPGGTVVVVG 176
Query: 148 -GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204
G IG AI + K G V V S E+L + K+ GADV +N +D A + E T
Sbjct: 177 AGP--IGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234
Query: 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
GG+G DV+++ +G+ + L +L G + ++G GG L + +K LT++G +
Sbjct: 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSL 294
|
Length = 350 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 7e-34
Identities = 83/307 (27%), Positives = 126/307 (41%), Gaps = 53/307 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVED---PQIKDDEVLIKVEATALNRADTLQRKGSY-----P 52
M+A+++T G + +L +D P EVLI+V A +N D R+G Y
Sbjct: 1 MRAVLLTGHGGLD--KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDG 58
Query: 53 PPKGASPY--------------PGLECSGTILSVGKNVSRWKVGDQV------------- 85
G + G +++VG+ V ++G++V
Sbjct: 59 ATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDD 118
Query: 86 ---CALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST---VFMTSH 136
+G GG+AE VPA PV S +S + A FP +ST + +
Sbjct: 119 PADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP----CSYSTAENMLERAG 174
Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196
+ GE+ LV G S G+G+ +Q+ K +G V AG K + LGAD I
Sbjct: 175 VGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVRALGADTVILRDAPLL 233
Query: 197 VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 256
+ GG+ VDV+ D +G F L L GR G G EL++ +L+ K
Sbjct: 234 AD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKD 291
Query: 257 LTVQGIV 263
LT+ G
Sbjct: 292 LTLFGST 298
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 5e-33
Identities = 81/278 (29%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYP--PPKG 56
KA+V T+ G P EVLQL+ E P +EVL+K+ A +N AD Q +G YP PP
Sbjct: 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60
Query: 57 ASP--YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGG-YAEKVAVPAGQVLPVPSGVS 113
P G E G ++ VG V K GD V L G G + VPA ++ VP+ V
Sbjct: 61 PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVD 120
Query: 114 LKDAAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF-- 168
+ AA CT + + L PG+ + +G +S +G IQ+ K G++
Sbjct: 121 PEQAATLSVNPCTAY---RLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINV 177
Query: 169 VTAGSEEKLAVC--KDLGADVCINY---KTEDFVARVKEETGGKGVDVILDCMGASYFQR 223
V + + K LGAD + ++ +K GG+ + L+C+G
Sbjct: 178 VRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGR-PKLALNCVGGKSATE 236
Query: 224 NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
L+ G + G G + + L K +T++G
Sbjct: 237 LARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRG 274
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 5e-33
Identities = 91/293 (31%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP- 59
MKA+V PG L+++EV P+ DEVLIKV A + D +G + GA+P
Sbjct: 1 MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEF----GAAPP 53
Query: 60 -YPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG------ 91
PG E +G +++VG V+ +KVGD+V C L
Sbjct: 54 LVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRN 113
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
GG+AE V VPA QV +P +S ++AA ++C V + PG+S LV G
Sbjct: 114 GGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIK--PGDSVLVFGAGP- 170
Query: 152 IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
IG Q+ K G RV V +EEKL + K LGA ++ ED A+ +E G D
Sbjct: 171 IGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYGFD 228
Query: 211 VILDCMG-ASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQG 261
V+++ G ++ + G + + G A+ ++ +F K LT+ G
Sbjct: 229 VVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIG 281
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 2e-32
Identities = 92/289 (31%), Positives = 133/289 (46%), Gaps = 32/289 (11%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA GS +L L+EV P+ EVL+KV+A + +D G P
Sbjct: 1 MKAWRFH-KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLT 59
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV----------CAL-LGG----------------GG 93
G E +GT++ VG V+ +KVGD+V CAL G GG
Sbjct: 60 LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
+AE + VPA ++PVP GV AA + T + V + PGE+ LV G G+G
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLV-IGLGGLG 178
Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
A+Q+ K G V EEKL + K+LGAD +N + K G G DVI
Sbjct: 179 LNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPK-DKKAAGLGGGFDVIF 237
Query: 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
D +G F+ ++ GR+ ++G G K ++++ L A+ L + G
Sbjct: 238 DFVGTQPTFEDAQKAVKPGGRIVVVGL-GRDKLTVDLSDLIARELRIIG 285
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 8e-32
Identities = 79/232 (34%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 17 LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----PPKGASPYPGLECSGTILSV 72
+ +V P EVL+K +N +D G Y PP G E G +++V
Sbjct: 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDC----GFEGVGEVVAV 75
Query: 73 GKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV------ACT 126
G+ V+ +KVGD V A + G +AE VPA +PVP PEV T
Sbjct: 76 GEGVTDFKVGDAV-ATMSFGAFAEYQVVPARHAVPVP--------ELKPEVLPLLVSGLT 126
Query: 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186
+ + GE+ LV + G G FA+Q+ K G V T S+EK K LG D
Sbjct: 127 ASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCD 186
Query: 187 VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
INYKTED +K+E KGVDV+ + +G F + +L + GRL +IG
Sbjct: 187 RPINYKTEDLGEVLKKEY-PKGVDVVYESVGGEMFDTCVDNLALKGRLIVIG 237
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-31
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 151 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
G+G A+Q+ K G RV SEEKL + K+LGAD INY+ EDFV RV+E TGG+GV
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60
Query: 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
DV++DC+GA + ++ L L GR+ ++G GGA + L K LT+ G
Sbjct: 61 DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGS 114
|
Length = 131 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 1e-30
Identities = 81/262 (30%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ P +P L+L EV DPQ E L++V A +LNR + K + P GA P
Sbjct: 1 MRALVVD-PDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGEL---KFAAERPDGAVP- 55
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
G + +G + + S VG +V L G +AE VAVP G + +P GVS AA
Sbjct: 56 -GWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATL 114
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
P T + L G LV G S G+G FA+Q+ G V GS +
Sbjct: 115 PVAGVTALRALRRGGPLL-GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL 173
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
++LGA V E G VD+++D +G R L L G + +G+
Sbjct: 174 RELGAAE---------VVVGGSELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSS 224
Query: 241 GGAKTELNITSLF----AKRLT 258
G N + +RL
Sbjct: 225 SGEPAVFNPAAFVGGGGGRRLY 246
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-30
Identities = 94/316 (29%), Positives = 139/316 (43%), Gaps = 60/316 (18%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ P P L ++E+ P+ K+ E+LI+V A + +D KG P P
Sbjct: 1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPF--V 56
Query: 61 PGLECSGTILSVGKNV---SRWKVGDQV-------------CA----------------- 87
G E SG ++ VG NV VGD+V CA
Sbjct: 57 LGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLK 116
Query: 88 --LLGG-----------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
L G GG AE VPA + P+P + ++A T +
Sbjct: 117 GTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAY 176
Query: 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADV 187
+ + + PGE+ V G G+G+ AIQ+ K G + +EKLA K+LGA
Sbjct: 177 GALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH 235
Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIG-TQGGAKT 245
+N ED VA ++E TGG+GVDV+++ +G F+ L + GR ++G GGA
Sbjct: 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATA 295
Query: 246 ELNITSLFAKRLTVQG 261
E+ IT L + + + G
Sbjct: 296 EIPITRLVRRGIKIIG 311
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 2e-30
Identities = 84/291 (28%), Positives = 119/291 (40%), Gaps = 43/291 (14%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
KA V+ G P L+ +EV P+ EVLIK+EA + D +G + K P
Sbjct: 1 KAAVVHAAGGP--LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSK--YPLV 56
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------C----------------ALLGG----G 92
PG E G ++ VG V KVGD+V C A+ G G
Sbjct: 57 PGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQG 116
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
GYAE + A + +P G+ L AA TV+S + + PGE V G G+
Sbjct: 117 GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVL-GIGGL 174
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
G A+Q + G S +K + + LGAD ++ E E+ G DVI
Sbjct: 175 GHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAEL-----DEQAAAGGADVI 229
Query: 213 LDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
L S + LG L GR+ ++G +I L KR ++ G
Sbjct: 230 LVT-VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAG 279
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 44/293 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA+ +T+PG P L ++V P EVLIKVEA + +D ++G+ P Y
Sbjct: 1 YKAVQVTEPGGPLELVERDVPLPGP--GEVLIKVEACGVCHSDAFVKEGAMPGLS----Y 54
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-CALLGG------------------------- 91
P G E G I +VG+ VSRWKVGD+V GG
Sbjct: 55 PRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT 114
Query: 92 --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
GGYAE + PA + +P + +AA T ++ S PG+ V G
Sbjct: 115 RDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNA-LRNSGAKPGDLVAVQG-I 172
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
G+G A+Q G R + +K + + LGA I+ ED ++ E G G
Sbjct: 173 GGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQ-ELG--GA 229
Query: 210 DVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+IL A +G L G+L I+G G ++ L R ++ G
Sbjct: 230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEP-VAVSPLQLIMGRKSIHG 281
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 7e-29
Identities = 79/275 (28%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 6 ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ-RKG----SYPPPKGASPY 60
+T PG EV +E P +VL++VE + +D +G YP G
Sbjct: 1 LTGPGRFEV---EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPG---G 54
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG E G ++++G V VGD+V A L GG +AE A +P+PS L D AF
Sbjct: 55 PGHEGWGRVVALGPGVRGLAVGDRV-AGLSGGAFAEYDLADADHAVPLPS---LLDGQAF 110
Query: 121 P--EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EEK 176
P + C + VF + G++ V G IG +Q+ G R V A +
Sbjct: 111 PGEPLGCALN--VFRRGWIRAGKTVAVIGAGF-IGLLFLQLAAAAGARR-VIAIDRRPAR 166
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS--LNIDGRL 234
LA+ ++LGA + +E V RV+E TGG G DV+++ +G + +L + GRL
Sbjct: 167 LALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQW-PLDLAGELVAERGRL 225
Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQGIVPLISGP 269
I G + + K + + V
Sbjct: 226 VIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRI 260
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 9e-29
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 12/267 (4%)
Query: 1 MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGA 57
M+A V TQ G P VL++ EV P EVL++ + ++ D +G+Y P A
Sbjct: 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPA 60
Query: 58 SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
G E G + +VG+ V +VG +V G +AE PA ++P+P G+S + A
Sbjct: 61 IG--GSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVA 118
Query: 118 A---AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
A A P A + + + PG+ + + +G + +G+ V +
Sbjct: 119 AQLIAMPLSALMLLDFL----GVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD 174
Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
+A + LG ++ + + +V+E GG + V LD +G L L G L
Sbjct: 175 AGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTL 234
Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQG 261
G+ G +++ L K+ TV+G
Sbjct: 235 VSFGSMSGEPMQISSGDLIFKQATVRG 261
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-28
Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 23/236 (9%)
Query: 2 KAIVITQPGSPEVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
KA+ SP L + ++ KD+E+++KV A ALN D L+ SY
Sbjct: 2 KALTFKNNTSP--LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD-LKLYNSYTFHFKVK 58
Query: 59 PYP-GLECSGTILSVGKNV-SRWKVGDQVCAL-----LGGGGYAEKVAV-PAGQ---VLP 107
G + SG I+ VG NV S WKVGD+VC + G G ++ + V P +
Sbjct: 59 EKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITR 118
Query: 108 VPSGVSLKDAAAFPEVACTVWSTVF-MTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGV 165
P +SL++AAA+P V T + + + L P LV GGS+ +G FAIQ+ K +
Sbjct: 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNI 178
Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE----ETGGKGVDVILDCMG 217
V S + K LGAD I+Y V +K G D+ILDC+G
Sbjct: 179 GTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVG 234
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-28
Identities = 85/311 (27%), Positives = 123/311 (39%), Gaps = 63/311 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS---------- 50
MKA ++++EV +P +K EV IKV + GS
Sbjct: 1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGIC--------GSDLHEYLDGPI 49
Query: 51 YPPPKGASPYPGL--------ECSGTILSVGKNVSRWKVGDQVC---------------- 86
+ P +G G E SG ++ VG V+ +KVGD+V
Sbjct: 50 FIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRG 109
Query: 87 --------ALLG----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
+G GGG+AE V VPA V +P V L + AA E W V
Sbjct: 110 LYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPL-EEAALVEPLAVAWHAV-RR 167
Query: 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKT 193
S PG++ LV G IG I K G ++ V+ SE + + ++LGA + ++
Sbjct: 168 SGFKPGDTALVLGAGP-IGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE 226
Query: 194 EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 252
D VA V++ TGG GVDV DC G + + +L G + N L
Sbjct: 227 VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIW-EKPISFNPNDL 285
Query: 253 FAKRLTVQGIV 263
K T+ G +
Sbjct: 286 VLKEKTLTGSI 296
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 7e-27
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 17/272 (6%)
Query: 1 MKAIVITQPGSPEV---LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
MKA+++ + G P L L E E P+ EVLIKVEA +N +D KG Y K
Sbjct: 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKAL 60
Query: 58 SPYPGLECSGTILSVGKNVSRW-KVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
PG E SGT+++ G +G +V G YAE A Q LP+P GVS +
Sbjct: 61 PVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFE 120
Query: 116 DAAAF---PEVACTVWSTV-FMTSHLSPGESFLVH-GGSSGIGTFAIQMGKCQGVRVFVT 170
A+ P T + G +VH +S +G +++ K G++V
Sbjct: 121 QGASSFVNP---LTALGMLETAREE---GAKAVVHTAAASALGRMLVRLCKADGIKVINI 174
Query: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230
+E++ + K +GA+ +N DF+ +KE + D +G + L ++
Sbjct: 175 VRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPY 234
Query: 231 DGRLFIIGTQGGAKTEL-NITSLFAKRLTVQG 261
L++ G G E + L K +++G
Sbjct: 235 GSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-26
Identities = 94/298 (31%), Positives = 135/298 (45%), Gaps = 48/298 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
MKAIV T+ G +L EV P+ EVLIKV A ++ D + PP
Sbjct: 1 MKAIVKTKAGPG--AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPP 58
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA------------------------LLG 90
G E +G ++ VG+ V+R KVGD V A +LG
Sbjct: 59 L----IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG 114
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
G +AE V VP + + + A+ + V TV + +S G+S L+
Sbjct: 115 VDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAV-HTV-LAGDVS-GKSVLI-T 170
Query: 148 GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
G IG AI + K G V + + +L + K +GADV IN + ED V VK T G
Sbjct: 171 GCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED-VVEVKSVTDG 229
Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA-KRLTVQGI 262
GVDV+L+ G ++ L +L GR+ I+G G ++++ +L K LTVQGI
Sbjct: 230 TGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGI 286
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 2e-26
Identities = 79/286 (27%), Positives = 114/286 (39%), Gaps = 56/286 (19%)
Query: 9 PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR------KGSYPPPKGASPYPG 62
P P+ +L EV P++KD EVL++ ++ D R K PP + P G
Sbjct: 14 PPPPDDFELVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRG 70
Query: 63 LECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVSLK 115
VG+ +KVGD V G G+ E V + L G+ L
Sbjct: 71 G-------GVGEVVESRSPDFKVGDLV---SGFLGWQEYAVVDGASGLRKLDPSLGLPLS 120
Query: 116 DA------------AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ 163
E+ PGE+ +V + +G+ Q+ K
Sbjct: 121 AYLGVLGMTGLTAYFGLTEIG-----------KPKPGETVVVSAAAGAVGSVVGQIAKLL 169
Query: 164 GVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
G RV AGS+EK + ++LG D INYKT D +KE G+DV D +G
Sbjct: 170 GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVYFDNVGGEILD 228
Query: 223 RNLGSLNIDGRLFIIGT--QGGAKTEL---NITSLFAKRLTVQGIV 263
L LN GR+ + G Q A N+ ++ KRLT+QG +
Sbjct: 229 AALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFI 274
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 8e-25
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK------GSYPPP 54
MKA+V + L L +V P+ ++VLIKV+ TA+ D + P P
Sbjct: 1 MKALVKLKAE--PGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVP 58
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA---LLGG-------------------- 91
G E G ++ VG V+ +KVGD+V ++ G
Sbjct: 59 M----VVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG 114
Query: 92 ----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
G +AE + +PA V +P + AA F V T + L GE L+ G
Sbjct: 115 VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAV-HTAL-SFDLV-GEDVLITG 171
Query: 148 GSSG-IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
+G IG A + K G R V +T +E +L + + +GA +N ED + E
Sbjct: 172 --AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGM 229
Query: 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
+G DV L+ GA S F++ L ++N GR+ ++G G ++ + K LT++GI
Sbjct: 230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFKGLTIKGI 286
|
Length = 341 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-24
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 27/263 (10%)
Query: 17 LQEVEDPQIKDDEVLIKVEATALNRADTLQRKG---SYPPPKGASPYPGLECSGTILSVG 73
L+EV+ P+ + +VL++ +L+ R SY PP G G ++
Sbjct: 29 LEEVDVPEPGEGQVLLRTLYLSLD-PYMRGRMSDAPSYAPPVE----LGEVMVGGTVAKV 83
Query: 74 --KNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPV-PSGVSLKDA---AAFPEVACTV 127
N ++ GD V +G G+ E + + PS L P + T
Sbjct: 84 VASNHPGFQPGDIV---VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGL--TA 138
Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD 186
+ + GE+ +V + +G+ Q+ K +G RV AG EK + LG D
Sbjct: 139 YFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD 198
Query: 187 VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG-AKT 245
I+YK EDF +KE KG+DV + +G L LN+ R+ + G
Sbjct: 199 AGIDYKAEDFAQALKEAC-PKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAP 257
Query: 246 EL-----NITSLFAKRLTVQGIV 263
EL + L AKRL VQG +
Sbjct: 258 ELPPGPRRLPLLMAKRLRVQGFI 280
|
Length = 340 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 8e-24
Identities = 87/303 (28%), Positives = 124/303 (40%), Gaps = 49/303 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--------- 51
MKA + +PG P L+ E++ P+ EVL+KV A + +D G Y
Sbjct: 1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMS 58
Query: 52 -PPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV---------------------CA- 87
P G E G +++VG + + KVGD+V CA
Sbjct: 59 LDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAK 118
Query: 88 ---LLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES 142
L GGYAE V VP + L P G+ AA T +S V L E
Sbjct: 119 GRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEP 178
Query: 143 FLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201
++ G + G+G A+ + K G + V E KL K GADV +N D R+
Sbjct: 179 VVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRII 237
Query: 202 EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFA-KRLT 258
+ GG GVD ++D + S L G+L ++G GG E + L + LT
Sbjct: 238 KAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG---EATLPLPLLPLRALT 293
Query: 259 VQG 261
+QG
Sbjct: 294 IQG 296
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 96.1 bits (240), Expect = 6e-23
Identities = 68/269 (25%), Positives = 104/269 (38%), Gaps = 61/269 (22%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A V+ + G P ++ E++DP EVL+++ A L +D G P P A
Sbjct: 1 MRAAVLHEVGKPLEIEEVELDDP--GPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPA--V 56
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC---------------------------------- 86
G E +G + VG V+ K GD V
Sbjct: 57 LGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPD 116
Query: 87 -------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV---WST 130
A+ G G +AE VP V+ + + L AA + C V
Sbjct: 117 GTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGCGVTTGVGA 173
Query: 131 VFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVC 188
V T+ + PG++ V G G G+G AIQ + G + EKL + + GA
Sbjct: 174 VVNTARVRPGDTVAVIGCG--GVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHT 231
Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMG 217
+N +D V V++ T G+G D + +G
Sbjct: 232 VNASEDDAVEAVRDLTDGRGADYAFEAVG 260
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 5e-22
Identities = 70/245 (28%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 1 MKAIVI--TQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALN-------------RADT 44
M A I + G P +QL++V P++ EVL+ V A +N
Sbjct: 13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAA 72
Query: 45 LQRKGSYPPPKGASPY--PGLECSGTILSVGKNVSRWKVGDQVCAL-----------LGG 91
QR+G PY G + SG + +VG+ V WKVGD+V GG
Sbjct: 73 RQRRGR------DEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGG 126
Query: 92 -----------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
G +A+ V A Q++P P +S ++AAA+ V T + +F
Sbjct: 127 DPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLF-- 184
Query: 135 SH----LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 190
+ PG++ L+ G S G+G+ AIQ+ + G SEEK C+ LGA+ IN
Sbjct: 185 GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVIN 244
Query: 191 YKTED 195
+ D
Sbjct: 245 RRDFD 249
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 2e-21
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 41/293 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+ V PG V +L+E P EVL++V+A+ L +D + P
Sbjct: 1 MRGAVF--PGDRTV-ELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVI 57
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV-------CA---------------------LLGGG 92
PG E +G +++VG V+ ++VGD+V C G
Sbjct: 58 PGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDG 117
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG-GSSG 151
G+AE + VP ++P+P +S D A T + + +S ++ LV G G G
Sbjct: 118 GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVG 176
Query: 152 IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
+G A+ + + G V S E+L + K LGAD IN +D V ++E T G G D
Sbjct: 177 LG--ALMLARALGAEDVIGVDPSPERLELAKALGADFVIN-SGQDDVQEIRELTSGAGAD 233
Query: 211 VILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITS-LFAKRLTVQG 261
V ++C G + +R L ++ GRL ++G G + + +++ L K+ T+ G
Sbjct: 234 VAIECSGNTAARRLALEAVRPWGRLVLVGE--GGELTIEVSNDLIRKQRTLIG 284
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 6e-21
Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 1 MKAIVITQPGSPEV--LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
MKA+V+ +PG E L+L EV P+ EVLIKVEA + R D +G PPPK
Sbjct: 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPL 60
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQV-----------CAL-LGG--------------- 91
PG E G + +VG V+R+ VGD+V C G
Sbjct: 61 -IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTV 119
Query: 92 -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV-ACTVWSTVFMTSHLSPGESFLVHG-G 148
GGYAE + P+P D A P + A + + L PG+ ++G G
Sbjct: 120 DGGYAEYMVADERFAYPIPED--YDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFG 177
Query: 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186
+S A+Q+ + QG VF S E + ++LGAD
Sbjct: 178 AS--AHLALQIARYQGAEVFAFTRSGEHQELARELGAD 213
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 6e-21
Identities = 87/308 (28%), Positives = 131/308 (42%), Gaps = 53/308 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA+V PG V +EV PQI+D + ++KV A A+ +D +G P G
Sbjct: 1 MKAVVFKGPGDVRV---EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVL 57
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV---------------------CA--LLGG----- 91
G E G ++ VG V KVGD+V CA L G
Sbjct: 58 --GHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP 115
Query: 92 ---GGYAEKVAVPA--GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
G AE V VP G +L +P G+S + A ++ T + + + PG++ V
Sbjct: 116 NLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVI 174
Query: 147 GGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G +G A+ + RVF E+L LGA+ IN++ + V RV+E T
Sbjct: 175 GCGP-VGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INFEDAEPVERVREATE 232
Query: 206 GKGVDVILDCMGASYFQRNLGSLNID-----GRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
G+G DV+L+ +G + L L D G + +G + + K LT++
Sbjct: 233 GRGADVVLEAVGGA---AAL-DLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLR 288
Query: 261 -GIVPLIS 267
G P+ S
Sbjct: 289 FGRCPVRS 296
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 9e-21
Identities = 80/301 (26%), Positives = 132/301 (43%), Gaps = 54/301 (17%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD----TLQRKGSYPPPKGAS 58
A V+ PG L+L+E P+ EVL++V A + +D R G + +
Sbjct: 1 AAVLHGPGD---LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE--- 54
Query: 59 PYP---GLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGY----------- 94
P G E +GT+++VG V+ KVGD+V C G Y
Sbjct: 55 --PMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAAT 112
Query: 95 -------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
V PA +P VSL++ A ++ V + + + PG++ LV G
Sbjct: 113 PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHAC--RRAGVRPGDTVLVFG 170
Query: 148 GSSG-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKE 202
+G IG + K G +V VT +L K+LGA +N +TED ++ E
Sbjct: 171 --AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAE 228
Query: 203 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
GGKG DV+++C GA S Q + + G + ++G G + L +++ + + ++G
Sbjct: 229 LLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGM-GKPEVTLPLSAASLREIDIRG 287
Query: 262 I 262
+
Sbjct: 288 V 288
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 1e-20
Identities = 77/322 (23%), Positives = 115/322 (35%), Gaps = 77/322 (23%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+A V + G P L+++EV+ + EVL+++ AT + D G P +
Sbjct: 3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-----F 55
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G E +G + +VG+ V+ K GD V C
Sbjct: 56 PAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG 115
Query: 88 ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---- 125
LG +AE V ++ + D A E AC
Sbjct: 116 TMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKI-------DPDAPLEKACLLGC 168
Query: 126 ---TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK 181
T V T+ + PG++ V G G+G AIQ K G R+ + EKL + K
Sbjct: 169 GVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK 227
Query: 182 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQ 240
GA +N K D V E G D +C+G ++ L + + G IIG
Sbjct: 228 KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVA 287
Query: 241 G-GAKTELNITSLFAKRLTVQG 261
G G + L R +G
Sbjct: 288 GAGQEISTRPFQLVTGR-VWKG 308
|
Length = 366 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 2e-20
Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 73/329 (22%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRA-------------DTLQ 46
AI + G P + +QL+ V P++ EVL+ V A +N L+
Sbjct: 10 AFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLR 69
Query: 47 RKGSYPPPKGASPY--PGLECSGTILSVGKNVSRWKVGDQVCA----------------- 87
+ G K P+ G + SG + VG V+RWKVGD+V A
Sbjct: 70 KYG-----KLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDP 124
Query: 88 LLGG-----------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MT 134
+L G +AE V Q++P P ++ ++AA T + +
Sbjct: 125 MLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNP 184
Query: 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 194
+ + PG++ L+ G + G+G++A Q+ + G S EK C+ LGA+ I+
Sbjct: 185 AAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDF 244
Query: 195 D----------------------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
F R++E TGG+ D++ + G + F ++ G
Sbjct: 245 GHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGG 304
Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+ I G G + + L+ ++ +QG
Sbjct: 305 MVVICGGTTGYNHDYDNRYLWMRQKRIQG 333
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 87.6 bits (218), Expect = 4e-20
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 41/273 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA+V+ + L L+ + + + +VLI+V ++LN D L G+ + Y
Sbjct: 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR---NY 57
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSG 111
P G++ +GT++S R++ GD+V GG+AE V VPA V+P+P G
Sbjct: 58 PHTPGIDAAGTVVSSD--DPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEG 115
Query: 112 VSLKDAAAFPEVACTVWSTVF------MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165
+SL++A T +V T P LV G + G+G+ A+ + G
Sbjct: 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGP---VLVTGATGGVGSIAVAILAKLGY 172
Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK--------GVDVILDCMG 217
V G EE+ K LGA ++ ED + K G +D +G
Sbjct: 173 TVVALTGKEEQADYLKSLGASEVLD--REDL-----LDESKKPLLKARWAGA---IDTVG 222
Query: 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250
L G + G G + +
Sbjct: 223 GDVLANLLKQTKYGGVVASCGNAAGPELTTTVL 255
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 9e-20
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
KA+ +P P+ L ++ P+ ++L++V+A ++N DT R P G
Sbjct: 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQP 59
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
G + +G +++VG V+ +K GD+V + G AE V V P +S
Sbjct: 60 KILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFA 119
Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGES-----FLVHGGSSGIGTFAIQMGK-CQGVRVFV 169
+AAA P + T W +F ++ + L+ GG+ G+G+ IQ+ + G+ V
Sbjct: 120 EAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIA 179
Query: 170 TAGSEEKLAVCKDLGADVCINY 191
TA E +LGA I++
Sbjct: 180 TASRPESQEWVLELGAHHVIDH 201
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 2e-18
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 40/251 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA+V PG + L+EV DP+I+ + +++V AT++ +D +G P K
Sbjct: 1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMI 57
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV----------------------------CALLGG 91
G E G ++ VG +V R K GD+V L
Sbjct: 58 L-GHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR 116
Query: 92 --GGYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
GG AE V VP + +P G+ +DA ++ T + + + + PG + V G
Sbjct: 117 IDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAEL-AGIKPGSTVAVIG 175
Query: 148 -GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
G G+ A R+ + E+L + K+ GA IN K D V ++ E TGG
Sbjct: 176 AGPVGLCAVAGARLLGAA-RIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGG 234
Query: 207 KGVDVILDCMG 217
+GVD +++ +G
Sbjct: 235 RGVDCVIEAVG 245
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 82.9 bits (206), Expect = 3e-18
Identities = 86/318 (27%), Positives = 128/318 (40%), Gaps = 66/318 (20%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
A V+ +PG P VL+ E++DP+ DEVL+++ AT + D + R G P P A
Sbjct: 4 TAAVVREPGGPFVLEDVELDDPR--PDEVLVRIVATGICHTDLVVRDGGLPTPLPAVL-- 59
Query: 62 GLECSGTILSVGKNVSRWKVGDQVC------------------------ALLGGGG---- 93
G E +G + +VG V+ K GD V L G
Sbjct: 60 GHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDG 119
Query: 94 ---------------------YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWS 129
+A V V+ V V L+ A C T
Sbjct: 120 STPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPL---GCGIQTGAG 176
Query: 130 TVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV 187
V PG S V G G+ G+ A+ K G + + +L + K+LGA
Sbjct: 177 AVLNVLKPRPGSSIAVFGAGAVGLA--AVMAAKIAGCTTIIAVDIVDSRLELAKELGATH 234
Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQG-GAKT 245
IN K ED VA ++E TGG GVD LD G + ++ + +L G L ++G GA+
Sbjct: 235 VINPKEEDLVAAIREITGG-GVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEV 293
Query: 246 ELNITSLFAKRLTVQGIV 263
L++ L T++G++
Sbjct: 294 TLDVNDLLVSGKTIRGVI 311
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 82.2 bits (204), Expect = 3e-18
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
KA+V+ + Q++ ++ + + +VLIKV ++LN D L G SYP
Sbjct: 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPM-- 58
Query: 56 GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVP 109
PG++ +GT++S R++ GD+V G GGY++ VPA ++P+P
Sbjct: 59 ----IPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLP 112
Query: 110 SGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQGVR 166
G+SL++A A T +V + L+P + LV G + G+G+ A+ + G
Sbjct: 113 EGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE 172
Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR--VKEETGGKGVDVILDCMGASYFQRN 224
V + G E+ K+LGA I+ + + KE G +D +G
Sbjct: 173 VVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAG-----AVDTVGGHTLANV 227
Query: 225 LGSLNIDGRLFIIGTQGGAKTELNIT 250
L L G + G GG +L T
Sbjct: 228 LAQLKYGGAVAACGLAGGP--DLPTT 251
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 81/314 (25%), Positives = 129/314 (41%), Gaps = 63/314 (20%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+A V+T PG P L+++EV P ++ VL++V + +D G P P P
Sbjct: 2 RAAVLTGPGKP--LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRP----RVPLP 55
Query: 62 ---GLECSGTI---------------LSVGKNV-----------------------SRWK 80
G E G + L VG V +R K
Sbjct: 56 IILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK 115
Query: 81 VGDQVCALLGG--GGYAEKVAVPAGQ-VLPVPSGVSLKDAAAFPEVAC---TVWSTVFMT 134
G + GGYAE + +P G ++ VP V + AA C TV + +
Sbjct: 116 YGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP---ANCALATVLAALDRA 172
Query: 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCIN--- 190
+ G++ +V G + +G +A+ K G RV V GS E+L + ++ GAD I+
Sbjct: 173 GPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE 231
Query: 191 YKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELN 248
A V++ TGG+G DV+++ G + L L G ++G+ A T L+
Sbjct: 232 LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLD 291
Query: 249 ITSLFAKRLTVQGI 262
+ K LT+ G+
Sbjct: 292 PERIVRKNLTIIGV 305
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 3e-17
Identities = 86/296 (29%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT------LQRKGSYPPPKG 56
A++ T+PG +L EV P+ EVLIKV AT++ D + PP+
Sbjct: 1 ALMKTKPG--YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQ- 57
Query: 57 ASPYPGLECSGTILSVGKNVSRWKVGDQVCA-----------LLGG-------------- 91
G E +G ++ +G V KVGD V G
Sbjct: 58 ---VVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 114
Query: 92 --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
G +AE VPA + P + + A + V TV + +S G+S LV G
Sbjct: 115 TDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAV-HTV-LAGPIS-GKSVLVTGAG 171
Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
IG AI + K G V V+ +E +L + K +GA +N ED V V + T G+G
Sbjct: 172 P-IGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG 230
Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQGI 262
VDV L+ GA ++ L ++ GR+ ++G G T + +F K LT+ GI
Sbjct: 231 VDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIF-KGLTIYGI 285
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 7e-17
Identities = 88/337 (26%), Positives = 131/337 (38%), Gaps = 84/337 (24%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPP-PKGAS 58
MKA+V G V +EV DP+I+D + +++V ATA+ +D G P KG
Sbjct: 1 MKALVWHGKGDVRV---EEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGD- 56
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQV--------------------------------- 85
G E G + VG V KVGD+V
Sbjct: 57 -ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK 115
Query: 86 ------CALLGG----GGY----AEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWS 129
+ G GGY AE V VP V +P +S + A ++ T +
Sbjct: 116 LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYH 175
Query: 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADV 187
+ + PG++ V G +G FA + K G RV E+L + + LGA+
Sbjct: 176 AAELAE-VKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233
Query: 188 CINYKTEDFVA-RVKEETGGKGVDVILDCMGASY-------FQRNLGSLNID-------- 231
IN++ D V ++E TGG+G DV +D +G ++ L L D
Sbjct: 234 -INFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA 292
Query: 232 -------GRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
G + IIG GG + I + K LT++
Sbjct: 293 IQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRM 329
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 1e-16
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+A+V+ + + ++ + + + +VLI+V +++N D L S P K YP
Sbjct: 2 QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGL---ASIPGGKIVKRYP 58
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGV 112
G++ +GT+ V N R+K GD+V LG GGY+E VPA V+P+P G+
Sbjct: 59 FIPGIDLAGTV--VESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGL 116
Query: 113 SLKDAAAFPEVACTVWSTV--FMTSHLSP-GESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
+LK+A T ++ + L+P LV G + G+G+ A+ + G V
Sbjct: 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVA 176
Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
+ G + K LGA I E+ + + +D +G L +L
Sbjct: 177 STGKADAADYLKKLGAKEVIP--REELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQ 234
Query: 230 IDGRLFIIGTQGGAKTELNITSLF 253
G + + G GG + E T++F
Sbjct: 235 YGGSVAVSGLTGGGEVE---TTVF 255
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 1e-16
Identities = 65/267 (24%), Positives = 95/267 (35%), Gaps = 57/267 (21%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + G P L ++E+E K EV IKV AT + D G P P
Sbjct: 2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVI--L 57
Query: 62 GLECSGTILSVGKNVSRWKVGDQV-------------CA--------------------- 87
G E +G + S+G V+ K GD+V C
Sbjct: 58 GHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSD 117
Query: 88 --------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133
LG +AE V + + L+ T +
Sbjct: 118 GTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVN 177
Query: 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK 192
T+ ++PG + V G G+G I K G R+ +++K K LGA CIN +
Sbjct: 178 TAKVTPGSTCAVF-GLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236
Query: 193 T--EDFVARVKEETGGKGVDVILDCMG 217
+ V + E T G GVD + +G
Sbjct: 237 DQDKPIVEVLTEMTDG-GVDYAFEVIG 262
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 6e-16
Identities = 74/295 (25%), Positives = 123/295 (41%), Gaps = 49/295 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + + E +K E L+K+E + D G + G
Sbjct: 1 MKAAVVNK--DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRIL- 57
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY---- 94
G E G + VG V+ KVGD+V C + GY
Sbjct: 58 -GHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDG 116
Query: 95 --AEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
AE+ V A + VP G+ D A + C T + + S + PG+ ++ G+
Sbjct: 117 GMAEQCIVTADYAVKVPEGL---DPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIY-GA 171
Query: 150 SGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFVARVKEETGGK 207
G+G A+Q K +V +++KLA+ K++GAD+ IN + ED ++E+TGG
Sbjct: 172 GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGA 231
Query: 208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
V+ + + F + + ++ GR+ +G +L+I RL + GI
Sbjct: 232 HAAVV-TAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIP-----RLVLDGI 279
|
Length = 338 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 1e-15
Identities = 76/307 (24%), Positives = 121/307 (39%), Gaps = 69/307 (22%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA+V PG ++ P I++ + ++K+ T + D KG P
Sbjct: 1 MKALVYHGPGKISW---EDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVT---- 53
Query: 60 YPGL----ECSGTILSVGKNVSRWKVGDQV----------CAL---------LGGG---G 93
PG E G + VG V+ +KVGD+V C GG G
Sbjct: 54 -PGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILG 112
Query: 94 Y------AEKVAVP-AGQVL-PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
AE V +P A L +P GV + A V S + T + E ++
Sbjct: 113 NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAA-----VML---SDILPTGY----ECGVL 160
Query: 146 HGGSSGIGTFAIQMGKCQGVRVFVTAG------------SEEKLAVCKDLGADVCINYKT 193
+G T AI G+ +TA + +L V K LGA +N
Sbjct: 161 NGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK 220
Query: 194 EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 252
D + +V E T G+GVDV+++ +G + F+ + G + +G G +L++ L
Sbjct: 221 GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH-GKPVDLHLEKL 279
Query: 253 FAKRLTV 259
+ K +T+
Sbjct: 280 WIKNITI 286
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-15
Identities = 75/295 (25%), Positives = 116/295 (39%), Gaps = 45/295 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATA-----LNRADTLQRKGSYPPPK 55
M+A V L +++V DP+ +VL+KV A L+ +
Sbjct: 1 MRAAVFRD----GPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGP 56
Query: 56 GASPYP-----GLECSGTILSVGKNVS-RWKVGDQVCAL-----------------LGGG 92
G E G ++ G + KVG +V +L G
Sbjct: 57 SLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPG 116
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
GYAE + + +L VP G+S++DAA +A V + L+PGE LV G I
Sbjct: 117 GYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVG-LHAV-RRARLTPGEVALVIGCGP-I 173
Query: 153 GTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEETGGKG 208
G I K +GV + + S E+ A+ +GAD+ ++ + A GG
Sbjct: 174 GLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK 233
Query: 209 VDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA--KRLTVQ 260
VI +C+GA Q+ + GR+ ++ G NI A K LT+Q
Sbjct: 234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVV---GVCMESDNIEPALAIRKELTLQ 285
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 4e-15
Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 53/259 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA + G + E P ++ +++ A A +D G P +
Sbjct: 1 MKAFAMLGIGKVGWI---EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGER----- 52
Query: 61 PGL----ECSGTILSVGKNVSRWKVGDQVCA----------------------LLGG--- 91
G+ E G + VG V +K GD+V +LGG
Sbjct: 53 HGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF 112
Query: 92 -----GGYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP---GE 141
G +AE V + P+P G++ + A P++ ST F + L+ G+
Sbjct: 113 SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM----STGFHGAELANIKLGD 168
Query: 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 200
+ V G +G A+ + +G R+ ++ + K+ GA ++YK D V ++
Sbjct: 169 TVAVF-GIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQI 227
Query: 201 KEETGGKGVDVILDCMGAS 219
+ TGGKGVD ++ G
Sbjct: 228 LKLTGGKGVDAVIIAGGGQ 246
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 4e-15
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG G ++ VG V+ +K GD+V G +AE+V VPA ++P+P G+ + AA
Sbjct: 24 PGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT 80
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAV 179
+A T + V + GE V G +G A Q+ K G R V + +
Sbjct: 81 A-LAATALNGV-RDAEPRLGERVAVVGLGL-VGLLAAQLAKAAGAREVVGVDPDAARREL 137
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIG 238
+ LG + A +E GG+G DV+++ G S + L L GR+ ++G
Sbjct: 138 AEALGPADPV-------AADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190
Query: 239 TQGGAKTELNITSLF-AKRLTVQ 260
G L + F KRL ++
Sbjct: 191 WYGL--KPLLLGEEFHFKRLPIR 211
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 7e-15
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA+V+ + +L+E+++ + + +V ++V + LN D L G +
Sbjct: 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGK---GGIVRTF 57
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVP 109
P G++ +GT++ R+K GD+V +L G GGYA++ V A ++P+P
Sbjct: 58 PLVPGIDLAGTVVESSS--PRFKPGDRV--VLTGWGVGERHWGGYAQRARVKADWLVPLP 113
Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLS-----------PGESFLVHGGSSGIGTFAIQ 158
G+S + A A T T+ L LV G + G+G+ A+
Sbjct: 114 EGLSARQAMAI--------GTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVA 165
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 190
+ G V + G E+ + LGA I+
Sbjct: 166 LLARLGYEVVASTGRPEEADYLRSLGASEIID 197
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 72.5 bits (179), Expect = 1e-14
Identities = 69/294 (23%), Positives = 107/294 (36%), Gaps = 65/294 (22%)
Query: 14 VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTIL 70
L+ E + D+V IK+ + +D + + G + YP G E G ++
Sbjct: 11 KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEW----GPTKYPLVPGHEIVGIVV 66
Query: 71 SVGKNVSRWKVGD----------------------QVCA---------LLGG----GGYA 95
+VG V+++KVGD Q C G GGYA
Sbjct: 67 AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYA 126
Query: 96 EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS----- 150
+ + V V +P G+ AA P + C TV+ SP + V G
Sbjct: 127 DHIVVDERFVFKIPEGLDSAAAA--P-LLCA-GITVY-----SPLKRNGVGPGKRVGVVG 177
Query: 151 --GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
G+G A++ K G V + S K LGAD I K + + +
Sbjct: 178 IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAA-----GS 232
Query: 209 VDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+D+I+D + AS+ L L G L ++G + L R +V G
Sbjct: 233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLP-VPPFPLIFGRKSVAG 285
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 1e-14
Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 47/259 (18%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG--------SYP 52
M+A+V P +L+EV P+ E+L+KVEA + D G + P
Sbjct: 1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQP 57
Query: 53 PPKGASPYPGLECSGTILSVGKNVSRW--KVGDQVCA----------------------- 87
P PG E G ++ +G+ KVGD+V +
Sbjct: 58 PYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKH 117
Query: 88 -LLG-----GGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG 140
L G GG AE + P V VP + +DA +AC + +
Sbjct: 118 DLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKF--- 174
Query: 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
+ +V G+ +G I + + ++ V +E+LA+ + GADV +N D V +
Sbjct: 175 DDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK 234
Query: 200 VKEETGGKGVDVILDCMGA 218
+KE TGG G D+ ++ G
Sbjct: 235 IKELTGGYGCDIYIEATGH 253
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 4e-14
Identities = 76/276 (27%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 1 MKAIVITQPGSP------EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP 54
M+A V+ + G+P L ++EVE EVL+K+ A L +D G P
Sbjct: 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-- 58
Query: 55 KGASPYP---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------- 87
P P G E +G ++ VG+ V+ +VGD V CA
Sbjct: 59 ---RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA 115
Query: 88 -------LLGGG-----------------GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
LL GG +AE V V+ + V L+ AA F
Sbjct: 116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175
Query: 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKD 182
T V T+ + PG+S V G G+G A+ G V +E+KLA+ ++
Sbjct: 176 VLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE 234
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218
LGA +N + V +V+E TGG GVD + G+
Sbjct: 235 LGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGS 269
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 4e-14
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 12 PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILS 71
+L E E P +KD EVL EA L+ D R S +G G + + I S
Sbjct: 18 ESDFELVEEELPPLKDGEVL--CEALFLS-VDPYMRPYSKRLNEGD-TMIGTQVAKVIES 73
Query: 72 VGKNVSRWKVGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
KN S++ VG V A G G + +PA +P ++L P +
Sbjct: 74 --KN-SKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL-GVLGMPGL 129
Query: 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183
T + + GE+ +V+G + +G+ Q+ K +G +V AGS++K+A K+L
Sbjct: 130 --TAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKEL 187
Query: 184 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
G D NYKT +KE G+D D +G + L +N GR+ + G+
Sbjct: 188 GFDAVFNYKTVSLEEALKEAA-PDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 5e-14
Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 45/248 (18%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT---LQRKGSYPPPKGASPYP---GLECSGT 68
L++++V P +K DE+LI+V+A + +D K Y G + +P G E SG
Sbjct: 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98
Query: 69 ILSVGKNVSRWKVGDQVCA------------------------LLG---GGGYAEKVAVP 101
+ GKNV ++ GD V A LG G +AE +AV
Sbjct: 99 VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVN 158
Query: 102 A------GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGGSSGIGT 154
A ++ + S +A A E ++ +F+ PG +V+G IG
Sbjct: 159 ARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGP-IGL 217
Query: 155 FAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN---YKTEDFVARVKEETGGKGVD 210
AI + K G +V SEE+ + K++GAD N + +V E T G G D
Sbjct: 218 AAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGAD 277
Query: 211 VILDCMGA 218
+ ++ GA
Sbjct: 278 IQVEAAGA 285
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 3e-13
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 30/110 (27%)
Query: 27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV 85
EVL++V+A + +D +G PP K P G E +G + VG V+ KVGD+V
Sbjct: 1 PGEVLVRVKAAGICGSDLHIYRGEPPPVKL--PLILGHEGAGIVEEVGPGVTGLKVGDRV 58
Query: 86 CA------------------------LLG---GGGYAEKVAVPAGQVLPV 108
LG GG+AE V VPA ++P+
Sbjct: 59 VVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 3e-12
Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 49/289 (16%)
Query: 12 PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ--RKGSYPPPKGASPY-PGLECSGT 68
L+++E P+ EV ++V A + +D L + G + + P G E SG
Sbjct: 6 AGDLRVEERPAPEPGPGEVRVRVAAGGICGSD-LHYYQHGGFGTVRLREPMVLGHEVSGV 64
Query: 69 ILSVGKNVSRWKVGDQV-------------CAL-----------LGG--------GGYAE 96
+ +VG V+ G +V C LG GG+ E
Sbjct: 65 VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124
Query: 97 KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG-IGTF 155
+ V A Q +P+P G+SL+ AA E V L G+ LV G +G IG
Sbjct: 125 YLVVDASQCVPLPDGLSLR-RAALAEPLAVALHAVNRAGDL-AGKRVLVTG--AGPIGAL 180
Query: 156 AIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG-VDVIL 213
+ + G + T ++ LAV + +GAD +N + A KG DV+
Sbjct: 181 VVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA----YAADKGDFDVVF 236
Query: 214 DCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+ GA + L + G + +G G L + +L AK L ++G
Sbjct: 237 EASGAPAALASALRVVRPGGTVVQVGM-LGGPVPLPLNALVAKELDLRG 284
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 7e-12
Identities = 83/316 (26%), Positives = 123/316 (38%), Gaps = 67/316 (21%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V + G P V++ EV P K +EV IK+ AT++ D L +G A+ +P
Sbjct: 4 KAAVAWEAGKPLVIEEIEVAPP--KANEVRIKMLATSVCHTDILAIEG-----FKATLFP 56
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALLGG------------------GGYAEKVAV 100
G E +G + SVG+ V+ K GD+V L G E +
Sbjct: 57 VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM 116
Query: 101 PAGQVLPVPSG----------------------VSLKDAAAFPEVACTV---WST----V 131
P G G V+ D AA E C + +ST
Sbjct: 117 PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAA 176
Query: 132 FMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
+ T+ + PG + V G G+ G+ AI K G R+ +E+K K+ GA I
Sbjct: 177 WNTAKVEPGSTVAVFGLGAVGLS--AIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFI 234
Query: 190 NYK--TEDFVARVKEETGGKGVDVILDCMGASYFQRNL--GSLNIDGRLFIIGTQGGAKT 245
N K + ++E TGG GVD +C G + + G ++G GA+
Sbjct: 235 NPKDSDKPVSEVIREMTGG-GVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL 293
Query: 246 ELNITSLFAKRLTVQG 261
+ L R T +G
Sbjct: 294 SIRPFQLILGR-TWKG 308
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 2e-11
Identities = 68/290 (23%), Positives = 111/290 (38%), Gaps = 67/290 (23%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
++ ++ G+P L+ V DP EV++ ++A + D R+G +
Sbjct: 2 VRGVIARSKGAPVELETIVVPDP--GPGEVIVDIQACGVCHTDLHYREGGI-----NDEF 54
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV---------------------C---------- 86
P G E +G + +VG+ V+ GD V C
Sbjct: 55 PFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKM 114
Query: 87 ---------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA----CTVWS---T 130
LG G +AEK V AGQ V D AA P A C V +
Sbjct: 115 TLTDGTELSPALGIGAFAEKTLVHAGQCTKV-------DPAADPAAAGLLGCGVMAGLGA 167
Query: 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
T + G+S V G G+G AI G ++ + KL ++ GA +
Sbjct: 168 AVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV 226
Query: 190 NYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIG 238
N D V ++ TGG G DV++D +G +++ + ++ G + ++G
Sbjct: 227 NSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVG 276
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 1e-10
Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 21/234 (8%)
Query: 45 LQRKGSYPPPKGASPY-PGLECSGTILSVGKNV----SRWKVGDQVCALLGGGGYAEKVA 99
R + P+ PG +G V K V +KVGD V G G+ E
Sbjct: 54 RGRMKGHDDSLYLPPFKPGEVITG--YGVAKVVDSGNPDFKVGDLV---WGFTGWEEYSL 108
Query: 100 VPAGQVLPV--PSGVSLKD-AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156
+P GQ L + V L T ++ + GE+ V S +G
Sbjct: 109 IPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLV 168
Query: 157 IQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTE-DFVARVKEETGGKGVDVILD 214
Q+ K +G V +AGS+EK+ + K+ LG D NYK E D A +K G+D+ D
Sbjct: 169 GQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYF-PNGIDIYFD 227
Query: 215 CMGASYFQRNLGSLNIDGRLFIIG-----TQGGAKTELNITSLFAKRLTVQGIV 263
+G L ++N+ GR+ G + N+ ++ KR+ +QG +
Sbjct: 228 NVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFL 281
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 1e-10
Identities = 79/318 (24%), Positives = 117/318 (36%), Gaps = 73/318 (22%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ PG P ++ E++DP K EVL+K+ A+ L +D G P P+ YP
Sbjct: 3 KAAVLWGPGQPWEVEEIELDDP--KAGEVLVKLVASGLCHSDEHLVTGDLPMPR----YP 56
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV-------------CA------------LLGG-- 91
G E +G + VG V+ K GD V C+ LL G
Sbjct: 57 ILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQ 116
Query: 92 ---------------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
G ++E VP V+ + + L A V C V
Sbjct: 117 ISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACL---VGCGVPTG 173
Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGAD 186
W + + + PG++ +V G G+G A+Q G R V E K GA
Sbjct: 174 WGSAVNIADVRPGDTVVVM-GIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGAT 232
Query: 187 VCINYKTEDFVARVKEETGGKGVD---VILDCMGASYFQRNLGSLNIDGRLFIIG----T 239
E+ V V+E T G+G D + + + + L + GR+ + G
Sbjct: 233 HAFA-SMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMA 291
Query: 240 QGGAKTELNITSLFAKRL 257
K L +L K L
Sbjct: 292 DVDVKVNLFELTLLQKEL 309
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-10
Identities = 76/301 (25%), Positives = 127/301 (42%), Gaps = 61/301 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MK+IVI +P S L ++E PQ EV +KV+ + +D+ +G P K Y
Sbjct: 1 MKSIVIEKPNS---LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 53
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG--- 90
P G E G I +VG+ V ++G++V C++ LG
Sbjct: 54 PRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHR 113
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG-GS 149
GG++E VPA +P ++ + A T+ + V + + + L++G G
Sbjct: 114 DGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPF--TIAANVTGRTGPTEQDVALIYGAGP 171
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
G+ + G V+ + A +E+LA+ K+ GAD IN E + E KG
Sbjct: 172 VGLTIVQVLKG-VYNVKAVIVADRIDERLALAKESGADWVINNAQEP----LGEALEEKG 226
Query: 209 VD--VILDCMG-ASYFQRNLGSLNIDGRLFIIG---------TQGGAKTELNITSLFAKR 256
+ +I+D S + + + R+ ++G QG EL S+F+ R
Sbjct: 227 IKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKEL---SIFSSR 283
Query: 257 L 257
L
Sbjct: 284 L 284
|
Length = 339 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-10
Identities = 54/189 (28%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 62 GLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGY----------------- 94
G EC+G I VG V VGD+V C L G Y
Sbjct: 78 GHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGS 137
Query: 95 -AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
A +V PA +P VSL++ A ++ V + +++ P + LV G IG
Sbjct: 138 LANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLVMGAGP-IG 194
Query: 154 TFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKE--ETGGKG 208
+ + G R+ + +E+L+V K LGAD V ++ ED + V+E + G G
Sbjct: 195 LVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254
Query: 209 VDVILDCMG 217
+DV DC+G
Sbjct: 255 IDVSFDCVG 263
|
Length = 364 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 4e-10
Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 51/292 (17%)
Query: 6 ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
+T+PG P + VE P++ +V++KV + D G E
Sbjct: 4 MTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEI 61
Query: 66 SGTILSVGKNVSRWKVGDQV----------CALLG-----------------GGGYAEKV 98
SG ++ G + W +G V C L GG+A +
Sbjct: 62 SGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHI 120
Query: 99 AVPAGQVLPV------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
VPA + V +G+ L+ + + T + + + L G+ +V G+ G+
Sbjct: 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVI-GAGGV 178
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR-VKEETGG----K 207
G + +Q K G V EKL + K GAD+ +N K D AR VK+ +
Sbjct: 179 GGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPK--DKSAREVKKLIKAFAKAR 236
Query: 208 GVD----VILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFA 254
G+ I +C G+ Q + L L+ G L ++G AKTE +++L A
Sbjct: 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGY-TMAKTEYRLSNLMA 287
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 5e-10
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 242
LGAD I+Y TEDF E T G+GVDV+LD +G R L +L GRL IG
Sbjct: 1 LGADEVIDYTTEDFE----EATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDL 56
Query: 243 AKTE 246
+
Sbjct: 57 LLSV 60
|
Length = 129 |
| >gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 2e-09
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
+L+ VE P + + EVL+ EA L+ D R + +G + G + + + S K
Sbjct: 19 FELKTVELPPLNNGEVLL--EALFLS-VDPYMRVAAKRLKEGDTMM-GQQVARVVES--K 72
Query: 75 NVSRWKVGDQVCALLG-------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV 127
NV+ G V A G G EK+ LP+ + P + T
Sbjct: 73 NVA-LPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPLSLALG---TVGMPGL--TA 126
Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 187
+ + + GE+ +V+ + +G+ Q+ K +G +V AGS+EK+A K LG DV
Sbjct: 127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDV 186
Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
NYKT + ++ G D D +G + +G + GR+ I G
Sbjct: 187 AFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 237
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 2e-09
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 57/271 (21%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDE-VLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA+V PG+ V ++V DP+I+ ++++ TA+ +D +G G
Sbjct: 1 MKAVVYGGPGNVAV---EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPG--- 54
Query: 60 YP-GLECSGTILSVGKNVSRWKVGDQVC-------------------------------- 86
G E G + VG V KVGD+V
Sbjct: 55 LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA 114
Query: 87 ---ALLGG--GGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTVFM---TSH 136
+G GG AE + VP +L +P K+ + ++ ++ T + +
Sbjct: 115 YGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLS-DIFPTGWHGLELAG 173
Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED 195
+ PG++ V G+ +G A +G RV+V E+L + + +GA + I++ D
Sbjct: 174 VQPGDTVAVF-GAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD 231
Query: 196 FVARVKEETGGKGVDVILDCMGASYFQRNLG 226
V ++ G GVD +DC+G Y R+ G
Sbjct: 232 PVEQILGLEPG-GVDRAVDCVG--YEARDRG 259
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 4e-09
Identities = 61/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MK++V G +++ E P+IK D+VL+KV ++ L +D + R GA
Sbjct: 1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSD-IPRIFK----NGAHY 52
Query: 60 YP---GLECSGTILSVGKNVSRWKVGDQV-CALL-------------------------- 89
YP G E SG + +VG V GD V C L
Sbjct: 53 YPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR 112
Query: 90 GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
GG AE + V + +P+ + ++D A + TV F + G++ ++ G
Sbjct: 113 RDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPI--TVGLHAFHLAQGCEGKNVIIIGAG 170
Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCIN 190
+ IG AIQ G + V + EKLA+ K LGA N
Sbjct: 171 T-IGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFN 211
|
Length = 347 |
| >gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 2e-08
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVA 198
G+S V S +G Q+ K G V +AGS +K+ + K+ LG D NYK E +
Sbjct: 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLD 218
Query: 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG-----TQGGAKTELNITSLF 253
+ +G+D+ D +G L ++ I GR+ + G + ++ N+ +L
Sbjct: 219 AALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLI 278
Query: 254 AKRLTVQG 261
+KR+ +QG
Sbjct: 279 SKRIRMQG 286
|
Length = 348 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 3e-08
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 54/253 (21%)
Query: 28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQ 84
++V+IKV + D Q K G S YP G E G ++ VG +VS++ VGD
Sbjct: 35 EDVVIKVIYCGICHTDLHQIKNDL----GMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDI 90
Query: 85 V-CALLGG----------------------------------GGYAEKVAVPAGQVLPVP 109
V ++ G GG+A + V V+ +P
Sbjct: 91 VGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIP 150
Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG--GSSGIGTFAIQMGKCQGVRV 167
G++ + AA TV+S + SH +S L G G G+G +++ K G V
Sbjct: 151 EGMAPEQAAPLLCAGVTVYSPL---SHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHV 207
Query: 168 FVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNL 225
V + S++K + LGAD +Y A ++E +D I+D + + + L
Sbjct: 208 TVISSSDKKREEALEHLGAD---DYLVSSDAAEMQE--AADSLDYIIDTVPVFHPLEPYL 262
Query: 226 GSLNIDGRLFIIG 238
L +DG+L ++G
Sbjct: 263 SLLKLDGKLILMG 275
|
Length = 357 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 5e-08
Identities = 81/299 (27%), Positives = 127/299 (42%), Gaps = 47/299 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A VI PG ++++EV DP I + + +I+V AT + +D +G P + +P
Sbjct: 1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRG-VSPTRAPAP 56
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLG------GG 92
G E G + VG V+ K GD V C G G
Sbjct: 57 I-GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDG 115
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-------LSPGESFLV 145
G E V VP V S D + S V T H + PG + +V
Sbjct: 116 GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL-SDVMGTGHHAAVSAGVRPGSTVVV 174
Query: 146 HGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204
G +G A+ K G R+ + E++ A+ ++ GA + + E+ VARV+E T
Sbjct: 175 VG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELT 233
Query: 205 GGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTVQG 261
GG G D +L+C+G ++ + GR+ +G GG EL++ LF + + + G
Sbjct: 234 GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG--VELDVRELFFRNVGLAG 290
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 1e-07
Identities = 64/238 (26%), Positives = 95/238 (39%), Gaps = 43/238 (18%)
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCA--LLGG--------------------------- 91
PG E G VGKNV+++K GD+V ++G
Sbjct: 64 PGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSS 123
Query: 92 ------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
GGY++ + V VL +P G+ A TV+S + L
Sbjct: 124 DGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLG 183
Query: 146 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204
G G+G A+++GK G+RV V + S EK D LGAD ++ ++KE
Sbjct: 184 VNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD---SFLVTTDSQKMKEAV 240
Query: 205 GGKGVDVILDCMGASYFQRNLGS-LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
G +D I+D + A + L S L + G+L +G +L I L R V G
Sbjct: 241 G--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP-EKPLDLPIFPLVLGRKMVGG 295
|
Length = 375 |
| >gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 4e-07
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINY 191
H++PG ++ +V G + G+ A Q+G+ G RV GS+EK + K +LG D INY
Sbjct: 149 HITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINY 208
Query: 192 KTEDFVARVKEETGGKGVDVILDCMG 217
KT++ R++ E +GVDV D +G
Sbjct: 209 KTDNVAERLR-ELCPEGVDVYFDNVG 233
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 50/252 (19%)
Query: 27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGD 83
D++V +K+ + +D K + G + YP G E G + +GKNV ++K GD
Sbjct: 37 DEDVTVKILYCGVCHSDLHTIKNEW----GFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD 92
Query: 84 QV-CALLGG----------------------------------GGYAEKVAVPAGQVLPV 108
+V ++ G GGY++ + V VL
Sbjct: 93 RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRF 152
Query: 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF 168
P + L A TV+S + PG+ V G G+G A+++GK G++V
Sbjct: 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGV-AGLGGLGHVAVKIGKAFGLKVT 211
Query: 169 VTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLG 226
V + S K LGAD T+ ++K G +D I+D + A + LG
Sbjct: 212 VISSSSNKEDEAINRLGAD-SFLVSTDP--EKMKAAIG--TMDYIIDTVSAVHALGPLLG 266
Query: 227 SLNIDGRLFIIG 238
L ++G+L +G
Sbjct: 267 LLKVNGKLITLG 278
|
Length = 360 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 65/287 (22%), Positives = 107/287 (37%), Gaps = 46/287 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+V+ L+++++ P+ E L++V + D KG YP P G
Sbjct: 1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFP-GV--- 53
Query: 61 PGLECSGTILS------VGKNV-SRWKVGDQVCAL--------------LG----GGGYA 95
PG E G + VGK V + C LG G +A
Sbjct: 54 PGHEFVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFA 113
Query: 96 EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155
E + +P + VP V + A F E + ++PG+ V G +G
Sbjct: 114 EYLTLPLENLHVVPDLVP-DEQAVFAEPLAAALEILEQ-VPITPGDKVAVL-GDGKLGLL 170
Query: 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215
Q+ G V + EKLA+ + LG + + + E+ G G DV+++
Sbjct: 171 IAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPD---------EAESEGGGFDVVVEA 221
Query: 216 MG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
G S + L + G + + T G ++T +T+ G
Sbjct: 222 TGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVG 267
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 69/267 (25%), Positives = 101/267 (37%), Gaps = 56/267 (20%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
+A V G P L+++EV+ + EVL+++ AT + D G+ P+G P
Sbjct: 3 RAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGA--DPEGVFPVI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGYAEKVAVPAGQ------ 104
G E +G + +VG+ V+ KVGD V C G VAV Q
Sbjct: 59 LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118
Query: 105 --------------------------VLPVPSGVSLKDAAAFPEV---ACTVWS---TVF 132
V+P S + AA EV C V + V
Sbjct: 119 DGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVL 178
Query: 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191
T+ + G++ V G GIG IQ + R+ + K + K LGA C+N
Sbjct: 179 NTAKVEEGDTVAVF-GLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237
Query: 192 KTEDF-VARVKEETGGKGVDVILDCMG 217
D + V E GVD +C+G
Sbjct: 238 NDYDKPIQEVIVEITDGGVDYSFECIG 264
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++EVE K EV IK+ AT + D G+ P+G P
Sbjct: 4 KAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGA--DPEGLFPVI 59
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + SVG+ V+ K GD V L
Sbjct: 60 LGHEGAGIVESVGEGVTSVKPGDHVIPL 87
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ +P P ++E+E K EV IK+ AT + R+D G +P+P
Sbjct: 9 KAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-----VTPFP 61
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + SVG+ V+ K GD+V L
Sbjct: 62 VILGHEAAGIVESVGEGVTTVKPGDKVIPL 91
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 54/251 (21%)
Query: 14 VLQLQEVEDPQIKDDEVLIKVEATALNRAD-TLQRKGSYPP--PKGASPYP---GLECSG 67
L+L++ E P+I DDE+L++V + +L + L +GS P + P G E +G
Sbjct: 13 DLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAG 72
Query: 68 TILSVGKNVS-RWKVGDQV-----CALLGG-----------GGYAEKVAVPA----GQVL 106
TIL VGK ++K G + L G GG A +P L
Sbjct: 73 TILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCL 132
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGE-------------SFLVHGGSSGIG 153
+ G +A+ ++C V HL PGE + L G G+
Sbjct: 133 LIYEGDGYAEASLVEPLSC-VIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLM 191
Query: 154 T--FAIQMGKCQGVRVFVTAGSEEKLAVCKDL--------GADV-CINYKTED-FVARVK 201
+AI + VT ++E+LA + L G ++ +N T D A +
Sbjct: 192 AIDYAIHGPIGPS-LLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLM 250
Query: 202 EETGGKGVDVI 212
E TGG+G D +
Sbjct: 251 ELTGGQGFDDV 261
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 62/286 (21%), Positives = 94/286 (32%), Gaps = 55/286 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASP 59
MKAI + PG P V ++ ++ +P+ EVL++ + D G Y P G
Sbjct: 1 MKAIAVK-PGKPGV-RVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPG-ED 57
Query: 60 Y--PGLECSGTILSVGKNVSRWKVGDQVCALL---------------------------- 89
+ G E G + VG S GD V +
Sbjct: 58 FLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGI 116
Query: 90 -GGGGY-AEKVAVPAGQVLPVPSGVSLKDAAAFPE---VACTVWSTVFMTSHLSP---GE 141
G G+ E ++ VP SL D E V P
Sbjct: 117 KGLHGFMREYFVDDPEYLVKVPP--SLADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPR 174
Query: 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCINYKTEDFVA 198
LV G IG A + + +G V+V + K + ++LGA +N
Sbjct: 175 RALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--- 229
Query: 199 RVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA 243
V E D+I++ G L +L +G + + G GG
Sbjct: 230 -VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG 274
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 55/199 (27%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 74 KNVSRWKVG----DQVCALLGGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAFPEVACTVW 128
K S K G D L GG YAE +PAG ++PVP L DA A P C
Sbjct: 53 KCDSLRKYGHEALDSGWPLSGG--YAEHCHLPAGTAIVPVPD--DLPDAVAAP-AGCATA 107
Query: 129 STVFMTSHLSP--GESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
+ + G LV G G G+ T A RV S ++ + GA
Sbjct: 108 TVMAALEAAGDLKGRRVLVVGAGMLGL-TAAAAAAAAGAARVVAADPSPDRRELALSFGA 166
Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG-GA 243
+ R G+GVDV L+ GA+ + L SL++ G + G+ G
Sbjct: 167 TALAEPEVLA--ERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGG 224
Query: 244 KTELNITSLFAKRLTVQGI 262
L+ + + LT++G+
Sbjct: 225 PVALDPEQVVRRWLTIRGV 243
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 9/172 (5%)
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
GG+ V Q +P P + AF E L G+ V G
Sbjct: 124 GGFTRYKVVDTAQCIPYPEKAD-EKVMAFAEPLAVAIHAAHQAGDLQ-GKRVFV-SGVGP 180
Query: 152 IGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
IG + K G V A S L++ +++GAD +N + +D K E G D
Sbjct: 181 IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDL-DHYKAEKG--YFD 237
Query: 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
V + G S L G + +G GGA E + +L K ++++G
Sbjct: 238 VSFEVSGHPSSINTCLEVTRAKGVMVQVG-MGGAPPEFPMMTLIVKEISLKG 288
|
Length = 343 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+A V G V++ EV PQ E+ IKV +T+L R+D + P+
Sbjct: 14 RAAVAWGAGEALVMEEVEVSPPQPL--EIRIKVVSTSLCRSDLSAWESQALFPR----IF 67
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGG 91
G E SG + S+G+ V+ ++ GD V + G
Sbjct: 68 GHEASGIVESIGEGVTEFEKGDHVLTVFTG 97
|
Length = 378 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V + G P V++ EV PQ EV IK+ T+L D + P +P
Sbjct: 4 KAAVAWEAGKPLVIEEVEVAPPQAM--EVRIKILHTSLCHTDVYFWEAKGQTPL----FP 57
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
G E +G + SVG+ V+ K GD V
Sbjct: 58 RILGHEAAGIVESVGEGVTDLKPGDHV 84
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 274 | |||
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 99.98 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 99.97 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.97 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.96 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.95 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.92 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.91 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.79 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.74 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.31 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.25 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.05 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.98 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.8 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 98.71 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.64 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.64 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.6 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.58 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.55 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.53 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.52 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.51 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.5 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.48 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.45 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.44 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.41 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.41 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.4 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.39 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.36 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.36 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.35 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.35 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.32 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.31 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.28 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.28 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.28 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.27 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.26 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.26 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.25 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.24 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.23 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.23 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.23 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.22 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.19 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.18 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.17 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.16 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.16 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.15 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.15 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.15 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.12 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.12 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.11 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.1 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.1 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.09 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.09 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.08 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.08 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.06 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 98.06 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.06 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.04 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.02 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.02 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.01 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.01 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.01 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.01 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.0 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.99 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.99 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.99 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.99 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.99 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.99 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.99 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.98 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.97 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.97 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.97 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.97 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 97.97 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.95 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.94 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.93 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.93 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.93 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.93 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.92 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.92 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.92 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.91 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.91 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.9 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.9 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.9 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 97.9 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.89 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.89 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.89 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.89 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.89 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.89 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.88 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.87 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.87 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.85 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.85 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.84 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.84 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.84 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.84 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.84 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.84 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.82 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.82 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.81 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.81 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.8 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.79 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.79 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.78 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.78 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.77 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.77 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.76 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.76 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 97.76 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.76 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.76 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.75 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.75 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 97.75 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.75 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.74 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.74 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.74 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.73 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.73 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.71 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.71 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.71 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.7 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.69 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 97.68 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 97.68 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 97.68 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 97.68 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.67 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.66 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 97.66 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.63 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.61 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 97.61 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.61 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.6 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.58 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.58 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 97.57 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 97.57 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.53 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 97.53 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 97.53 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.52 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 97.52 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.52 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.51 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.5 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 97.49 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 97.49 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 97.49 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.48 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.47 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.46 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 97.46 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.43 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 97.42 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 97.42 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.41 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.41 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.41 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.41 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.4 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 97.39 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 97.38 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.38 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.38 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 97.38 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.37 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.37 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 97.37 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 97.37 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 97.36 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 97.36 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 97.35 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.35 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.33 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.32 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.31 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 97.31 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 97.29 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 97.29 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.28 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.28 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 97.27 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.26 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 97.25 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 97.25 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.21 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.2 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 97.18 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.17 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 97.17 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.16 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 97.15 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 97.14 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 97.13 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 97.1 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.09 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 97.09 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 97.08 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.08 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.07 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 97.06 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 97.05 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 97.04 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.04 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.04 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 97.03 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.02 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.01 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 96.99 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.98 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.97 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 96.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 96.95 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 96.95 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 96.94 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 96.94 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.93 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 96.91 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.89 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 96.87 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 96.86 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 96.84 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.84 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 96.84 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 96.83 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.83 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 96.82 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 96.8 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 96.8 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.8 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.8 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.77 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.75 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.75 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 96.75 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 96.75 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 96.73 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.72 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.72 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 96.71 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.71 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.69 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.69 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 96.68 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 96.67 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 96.66 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.66 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 96.65 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 96.64 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.63 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 96.62 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.61 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.59 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 96.58 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 96.57 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.57 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.56 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 96.56 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 96.56 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.55 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.54 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 96.53 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 96.52 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.51 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.51 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.5 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.5 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 96.5 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.49 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.48 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 96.46 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.44 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 96.4 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.38 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 96.37 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 96.37 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 96.35 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 96.34 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.34 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.34 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.32 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.28 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 96.25 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 96.2 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.2 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.18 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.17 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.15 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 96.13 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.12 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.11 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 96.1 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.09 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 96.09 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.08 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.08 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 96.07 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.06 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 96.05 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.04 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.03 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.02 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.02 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 96.0 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 96.0 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 95.98 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.98 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 95.97 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 95.97 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.96 |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-52 Score=346.99 Aligned_cols=257 Identities=37% Similarity=0.560 Sum_probs=237.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.+.|+|+++||+|+|++||+|++|++.++|.++... +|++||||.+|+|+++|++|+.|+
T Consensus 4 mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred eEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEEEecCCCccCC
Confidence 899999999988 99999999999999999999999999999999999998765 899999999999999999999999
Q ss_pred CCCEEEE----------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||.. +..+|+|+||+++|+++++++|+++++++||++.|++.|.|++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk 160 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALK 160 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehh
Confidence 9999964 224799999999999999999999999999999999999999995
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+ .+++||++|+|+|+ ||+|.+++|+|+.+|++|+++++++++++.++++|++++++..+.+..+.+.+. +|++
T Consensus 161 ~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~-----~d~i 233 (339)
T COG1064 161 K-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI-----ADAI 233 (339)
T ss_pred h-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhh-----CcEE
Confidence 5 89999999999998 699999999999999999999999999999999999999997777777766653 8999
Q ss_pred EECCChhhHHHhhhccccCCEEEEEecCC-CCccccchhhHhhcceEEEEeecccc
Q 024011 213 LDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 213 i~~~g~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
+++++...++..++.|+++|+++++|... .....++...++.++++|.|+...+.
T Consensus 234 i~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~ 289 (339)
T COG1064 234 IDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR 289 (339)
T ss_pred EECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH
Confidence 99999666999999999999999999984 56567888889999999999997643
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-50 Score=339.31 Aligned_cols=265 Identities=45% Similarity=0.752 Sum_probs=247.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++.++++..+++++.|.|.|++|||+|||+++|||+.|...+.|..+.....|++||.|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 99999999999877999999999999999999999999999999999997555556899999999999999999999999
Q ss_pred CCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||||+... .+|+|+||..+|++.++++|+++|+++||++++.++|||+++....++++|++|||+||+|++|.+++
T Consensus 81 ~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~ai 160 (326)
T COG0604 81 VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAI 160 (326)
T ss_pred CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHH
Confidence 999999986 67999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (274)
|+++..|+++++++.++++.+.++++|+++++++.+.++.+++++.++++++|+|+|+.|+..+...++.++++|+++.+
T Consensus 161 QlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~i 240 (326)
T COG0604 161 QLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI 240 (326)
T ss_pred HHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEE
Confidence 99999998877878788888899999999999999999999999999988999999999999999999999999999999
Q ss_pred ecCC-CCccccchhhHhhcceEEEEeecc
Q 024011 238 GTQG-GAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 238 g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
|... .....++...++.+.+++.|+...
T Consensus 241 g~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 241 GALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred ecCCCCCccccCHHHHhhccEEEEEecce
Confidence 9988 455567777888888888888765
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-45 Score=284.11 Aligned_cols=250 Identities=36% Similarity=0.573 Sum_probs=236.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|-+++++.|..+++++++.|.|+|.|+|++||..++|+|..|..++.|-+. +...|++||.|.+|+|+.+|++++++++
T Consensus 10 k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 10 KCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred eEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCcccccc
Confidence 568899999999999999999999999999999999999999999999885 3457999999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||||.-+.+.|.|+|+..+|...++++|+.+++++|+++....+|||..+++...+++|++||++.|.||+|++++|+++
T Consensus 89 GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~r 168 (336)
T KOG1197|consen 89 GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLR 168 (336)
T ss_pred ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..|++++.+..+.++.+.+++.|+.+.++++.+|+.+++.+.++++|+|+++|..|.+.+...+.+|++.|.++.+|...
T Consensus 169 a~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~as 248 (336)
T KOG1197|consen 169 AVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNAS 248 (336)
T ss_pred hcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCccccchhhH
Q 024011 242 GAKTELNITSL 252 (274)
Q Consensus 242 ~~~~~~~~~~~ 252 (274)
+....+++..+
T Consensus 249 gl~~p~~l~~l 259 (336)
T KOG1197|consen 249 GLIDPIPLNQL 259 (336)
T ss_pred CCCCCeehhhc
Confidence 76555554443
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-45 Score=292.88 Aligned_cols=258 Identities=26% Similarity=0.411 Sum_probs=229.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
++|.+..++++..+++.+++.|+|+++||+|++++||||++|++.+.|.++. ..+|.++|||++|+|+++|++|+.|++
T Consensus 11 ~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~ki 89 (360)
T KOG0023|consen 11 FGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKI 89 (360)
T ss_pred EEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccc
Confidence 5788888888767888999999999999999999999999999999999987 679999999999999999999999999
Q ss_pred CCEEEE-------------------Ee-----------c-----CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 82 GDQVCA-------------------LL-----------G-----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 82 Gd~V~~-------------------~~-----------~-----~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
||||-. +| . .|+|++|+++++..++++|++++.+.||++.|+..|
T Consensus 90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGIT 169 (360)
T KOG0023|consen 90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGIT 169 (360)
T ss_pred cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceE
Confidence 999832 01 1 356999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCC-CCcHHHHHHHHh
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYK-TEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~ 204 (274)
.|.+| ...++.||+++.|.|+ ||+|.+++|+++++|.+|++++++.+ +.+.++.+|++..++.. +.++.+.+.+.+
T Consensus 170 vYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 170 VYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred Eeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence 99999 5567889999999998 56999999999999999999999884 55666789999999887 788888888876
Q ss_pred CCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++ ++|.|.+. ....++.++++++.+|+++++|.... ...++..+++.+.++|.|+...
T Consensus 248 dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG 305 (360)
T KOG0023|consen 248 DG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVG 305 (360)
T ss_pred cC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccc
Confidence 54 56777766 44568899999999999999999887 6789999999999999999865
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=293.63 Aligned_cols=264 Identities=24% Similarity=0.349 Sum_probs=229.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCC--CCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|+|+++.++++ +++++.|.|++ .|+||+|++.++|||+||+|.+....... ...|+++|||.+|+|.++|++|+
T Consensus 5 ~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 5 NLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 78999999887 88999999987 99999999999999999999997654432 24699999999999999999999
Q ss_pred CCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHH
Q 024011 78 RWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129 (274)
Q Consensus 78 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~ 129 (274)
++++||||+.-. .+|++++|++.+++++++||+++|++++| |..+++++|+
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~H 160 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVH 160 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhh
Confidence 999999997411 36999999999999999999999999998 6677999999
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCC----cHHHHHHHHh
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE----DFVARVKEET 204 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~ 204 (274)
|. +++.++.|.++||+|| |++|+.+...|+..|+ +|++++..+.+++.++++|++.+.+.... ++.+.+....
T Consensus 161 Ac-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~ 238 (354)
T KOG0024|consen 161 AC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL 238 (354)
T ss_pred hh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence 98 7789999999999998 9999999999999999 89999999999999999999998765543 3344445555
Q ss_pred CCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccccccCc
Q 024011 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLISGPWC 271 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~y~ 271 (274)
+...+|+.|||+|... .+.++..++.+|++++++. +.....++......+++.+.|++.+....|.
T Consensus 239 g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~-g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~ 305 (354)
T KOG0024|consen 239 GKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGM-GAEEIQFPIIDVALKEVDLRGSFRYCNGDYP 305 (354)
T ss_pred cccCCCeEEEccCchHHHHHHHHHhccCCEEEEecc-CCCccccChhhhhhheeeeeeeeeeccccHH
Confidence 5556999999999854 7889999999999888875 4556799999999999999999988655443
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=301.55 Aligned_cols=261 Identities=29% Similarity=0.376 Sum_probs=231.6
Q ss_pred CEEEEEcCCCC------CcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGS------PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~------~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~ 74 (274)
|||+++.++|+ ++.+++++.|.|+|+++||+|||.+++||++|++.+.|.++. ..|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 99999999875 367999999999999999999999999999999999886542 3588999999999999999
Q ss_pred CCCCCCCCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeE
Q 024011 75 NVSRWKVGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVL 106 (274)
Q Consensus 75 ~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~ 106 (274)
+++++++||+|+.... +|+|+||+.+|.+.++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999986310 2689999999999999
Q ss_pred ECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCC
Q 024011 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 107 ~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~ 185 (274)
++|+++++++++.+.++..++|+++.+..++++|++|+|.|+ |++|++++|+++..|+ +|+++++++++++.++++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCC
Confidence 999999999999999999999999877788999999999996 9999999999999999 69999999999999999999
Q ss_pred CEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+.+++....++.+.+.+.+++ ++|++||++|. ..+..+++.++++|+++.+|.... ....++...++.+++++.|++
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 999988877888888887765 79999999986 457888999999999999997653 234677778889999999987
Q ss_pred cc
Q 024011 264 PL 265 (274)
Q Consensus 264 ~~ 265 (274)
..
T Consensus 317 ~~ 318 (371)
T cd08281 317 MG 318 (371)
T ss_pred cC
Confidence 54
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=292.61 Aligned_cols=259 Identities=23% Similarity=0.360 Sum_probs=229.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++++ +++++.|.|+|+++||+|||.++|+|++|++.+.|.++. .+|.++|||++|+|+++|+++++|+
T Consensus 2 mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 2 VRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred cEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccC
Confidence 999999998875 888999999999999999999999999999998886542 3588999999999999999999999
Q ss_pred CCCEEEEEe----------------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccC
Q 024011 81 VGDQVCALL----------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 120 (274)
+||+|+... .+|+|+||+.+|...++++|+++++++++.+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 999997621 2488999999999999999999999999999
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++..++|.++.+...+++|+++||+|+ |++|++++|+++..|++ |+++++++++++.++++|++.+++....++.+.
T Consensus 158 ~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 236 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEA 236 (358)
T ss_pred cccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHH
Confidence 9899999988777788999999999986 99999999999999994 999999999999999999999998887788888
Q ss_pred HHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEEeec
Q 024011 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+.+.+++.++|++||++|. ..+..+++.++++|+++.+|..... ...+++..++.+++++.+++.
T Consensus 237 i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 8888877789999999996 4578889999999999999986542 345677678888899988763
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=278.58 Aligned_cols=258 Identities=28% Similarity=0.385 Sum_probs=231.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+|+++..++++| |++++++..+|++|||+||+.++|+|++|.+..+|..|.+ +|.++|||.+|+|++||++|+.++
T Consensus 3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccccC
Confidence 589999999988 9999999999999999999999999999999999998875 799999999999999999999999
Q ss_pred CCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|+.... -++|++|.++++.++++++++.
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999975320 1489999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+++.++.+.|...|.+.+..+.+++++|+++.|+|. |++|++++|-|+..|+ ++++++.+++++++++++|+.+.+|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecc
Confidence 999999999999999999989999999999999997 9999999999999999 89999999999999999999999998
Q ss_pred CCC-cHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeecc
Q 024011 192 KTE-DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+. +..+.+.+.+++ |.|.+||++|.. .+..++++..++|+.+.+|.... ..+.++...+... .++.|+...
T Consensus 238 ~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G 312 (366)
T COG1062 238 KEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFG 312 (366)
T ss_pred hhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeec
Confidence 776 588888888875 799999999984 58899999999999999998763 3334555555554 888888754
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=289.53 Aligned_cols=257 Identities=29% Similarity=0.442 Sum_probs=223.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++ .+++++.+.|+|+++||+||+.++++|++|++.+.+.+......|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFPGDR---TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEecCC---ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 9999998654 4999999999999999999999999999999988776443233578999999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|+... .+|+|++|+.+|.+.++++|+++++++++++++++.++|+++
T Consensus 78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l- 156 (339)
T cd08239 78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL- 156 (339)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-
Confidence 999998642 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
....+++|++++|+|+ |++|++++|+++..|++ |+++++++++++.++++|++.+++.+..+ .+.+.+.++++++|+
T Consensus 157 ~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~~d~ 234 (339)
T cd08239 157 RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAGADV 234 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCCCCE
Confidence 4567889999999986 99999999999999998 99999999999999999999998887666 667777777678999
Q ss_pred EEECCChhh-HHHhhhccccCCEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 212 ILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 212 vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
+||+.|+.. ...+++.++++|+++.+|..... .++. ..++.+++++.|++..
T Consensus 235 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~ 288 (339)
T cd08239 235 AIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYF 288 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecC
Confidence 999999865 47889999999999999976543 2332 4567789999998764
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=290.97 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=222.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++++ +++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|+
T Consensus 11 mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 88 (381)
T PLN02740 11 CKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK 88 (381)
T ss_pred eEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence 899999987754 788899999999999999999999999999999887643345688999999999999999999999
Q ss_pred CCCEEEEEe---------------------------------------------------cCCeeeeEEeeeCCCeEECC
Q 024011 81 VGDQVCALL---------------------------------------------------GGGGYAEKVAVPAGQVLPVP 109 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------------------------------~~g~~~~~~~~~~~~~~~~p 109 (274)
+||||++.. .+|+|+||+.+|.+.++++|
T Consensus 89 vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP 168 (381)
T PLN02740 89 AGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKID 168 (381)
T ss_pred CCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECC
Confidence 999998642 14899999999999999999
Q ss_pred CCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEE
Q 024011 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188 (274)
Q Consensus 110 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (274)
+++++++++.+.++..++|+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+
T Consensus 169 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~ 247 (381)
T PLN02740 169 PNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF 247 (381)
T ss_pred CCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE
Confidence 999999999999999999998877788999999999996 9999999999999999 69999999999999999999988
Q ss_pred EeCCCC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCCC-ccccchhhHhhcceEEEEee
Q 024011 189 INYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 189 ~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.+.. ++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|..... ...++... +.+++++.|++
T Consensus 248 i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~-~~~~~~i~g~~ 325 (381)
T PLN02740 248 INPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME-LFDGRSITGSV 325 (381)
T ss_pred EecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH-HhcCCeEEEEe
Confidence 887653 366777777765 79999999997 4578888999886 999999986542 12333332 34678898876
Q ss_pred cc
Q 024011 264 PL 265 (274)
Q Consensus 264 ~~ 265 (274)
..
T Consensus 326 ~~ 327 (381)
T PLN02740 326 FG 327 (381)
T ss_pred cC
Confidence 53
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=282.02 Aligned_cols=263 Identities=29% Similarity=0.435 Sum_probs=227.6
Q ss_pred CEEEEEcCCCCC---cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSP---EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
||++++++++++ +.+++++.|.|.|+++||+||+.++++|++|++.+.|.++.....|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 999999998865 56889999999999999999999999999999999887654445688999999999999999998
Q ss_pred C-CCCCCEEEEEec-CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe-cCCchHHH
Q 024011 78 R-WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGT 154 (274)
Q Consensus 78 ~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~-Ga~g~iG~ 154 (274)
+ |++||+|+++.. +|+|++|+.+|.+.++++|+++++++++.++....++|..+ ..... ++++++|+ +++|++|+
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~ 158 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR 158 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence 6 999999998754 38999999999999999999999999998888888997554 44454 45556565 78899999
Q ss_pred HHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEE
Q 024011 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (274)
Q Consensus 155 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (274)
+++|+++..|++++++++++++++.++++|++++++.+..++.+.+.+.+.++++|++||+.|+......+++++++|++
T Consensus 159 ~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~ 238 (324)
T cd08291 159 MLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTL 238 (324)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEE
Confidence 99999999999999999999999999999999999988888888888888777899999999988788889999999999
Q ss_pred EEEecCCCCcc-ccchhhHhhcceEEEEeecc
Q 024011 235 FIIGTQGGAKT-ELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 235 v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~ 265 (274)
+.+|...+... .++...++.+++++.++...
T Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (324)
T cd08291 239 YVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLT 270 (324)
T ss_pred EEEEecCCCCcccCCHHHHhhcCcEEEEEEHH
Confidence 99997654432 35566778889999888754
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=282.04 Aligned_cols=257 Identities=26% Similarity=0.378 Sum_probs=217.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++...++. +++++.|.|+|+++||+|||.++|+|++|++.+.|.++. ...|.++|||++|+|+++|++++.|+
T Consensus 2 ~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccCC
Confidence 899999887654 889999999999999999999999999999999887653 24688999999999999999999999
Q ss_pred CCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||++... +|+|+||+.+|.+.++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999986420 2689999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++++++++.++|+++.+..++++|+++||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 237 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcc
Confidence 999999999999999999877788999999999986 9999999999999999 79999999999999999999998876
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.+ .++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... ....+....++. +..+.|+.
T Consensus 238 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~ 312 (368)
T TIGR02818 238 NDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSA 312 (368)
T ss_pred cccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEee
Confidence 53 3455667776665 79999999996 4578889999886 99999997642 222333333333 33466654
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=261.41 Aligned_cols=264 Identities=25% Similarity=0.385 Sum_probs=235.1
Q ss_pred EEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 2 ~a~~~~~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|++++.+.++| +++++.+.+.|....++|+||..++.|||+|+..++|.||..+..|.+-|+|++|+|+.+|+++..|+
T Consensus 21 kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk 100 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFK 100 (354)
T ss_pred ceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccC
Confidence 78999999988 68999999999888888999999999999999999999998888899999999999999999999999
Q ss_pred CCCEEEEEecC-CeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 81 VGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 81 ~Gd~V~~~~~~-g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
+||+|+....+ |+|++|.+.+++.++++++.++++.||++..+.+|||..|.+..++++|++++-.||.+++|++++|+
T Consensus 101 ~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQl 180 (354)
T KOG0025|consen 101 PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQL 180 (354)
T ss_pred CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHH
Confidence 99999987643 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHH----HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 160 GKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
|+..|.+-+-+.|+....+++ +.+|+++++...+....+..........+.+.+||+|+.......+.|.++|+.+
T Consensus 181 aka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~Ggtmv 260 (354)
T KOG0025|consen 181 AKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMV 260 (354)
T ss_pred HHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEE
Confidence 999999999999887766554 5799999985433221111211122345799999999998888999999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
..|.+...+..++...++++.+.+.|++..
T Consensus 261 TYGGMSkqPv~~~ts~lIFKdl~~rGfWvt 290 (354)
T KOG0025|consen 261 TYGGMSKQPVTVPTSLLIFKDLKLRGFWVT 290 (354)
T ss_pred EecCccCCCcccccchheeccceeeeeeee
Confidence 999999888999999999999999999975
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=275.72 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=232.7
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++++++++ ..+++++.|.|.+.++||+|||.++++|++|++.+.|.++.....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 899999987765 4589999999999999999999999999999999888765333457889999999999999999999
Q ss_pred CCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
++||+|+++..+|+|++|+.++...++++|+++++++++.++....++|+++ ...++++|++++|+|++|.+|++++++
T Consensus 81 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~ 159 (324)
T cd08292 81 QVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAML 159 (324)
T ss_pred CCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHH
Confidence 9999999986579999999999999999999999999998888889999987 457899999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
|+.+|++++++++++++.+.++++|.+.+++.+..++.+.+.+.+.++++|++||+.|+.....++++++++|+++.+|.
T Consensus 160 a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 160 AAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred HHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence 99999999999999999888888899888888877888888888888889999999998878889999999999999987
Q ss_pred CCCCccccchhhHhhcceEEEEeec
Q 024011 240 QGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.......+++.....++.++.++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 240 MSGEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred CCCCCCcCCHHHHhhCCCEEEEEEc
Confidence 6433344555556778888888764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=281.44 Aligned_cols=256 Identities=24% Similarity=0.300 Sum_probs=219.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++.++++ .+++++.|.|+|+++||+|||.++|||++|++.+.+.. ..|.++|||++|+|+++|+++++|+
T Consensus 13 mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~ 86 (378)
T PLN02827 13 CRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFE 86 (378)
T ss_pred eEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccC
Confidence 89999987654 38899999999999999999999999999999887642 2477899999999999999999999
Q ss_pred CCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|++... +|+|+||+.+|...++++|+++
T Consensus 87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 9999987531 3789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++.+.+++.++|+++.+..++++|+++||+|+ |++|++++|+++..|+ .|+++++++++++.++++|++.+++.
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 999999888888899987767778999999999996 9999999999999999 47778889999999999999988877
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccC-CEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
.. +++.+.+.+.+++ ++|++||++|.. .+..+++.++++ |+++.+|..... ..++. ..++.+++++.|+...
T Consensus 246 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
T PLN02827 246 NDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFG 322 (378)
T ss_pred cccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecC
Confidence 64 3566667776665 799999999975 578899999998 999999986543 23333 3577789999998764
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=279.09 Aligned_cols=259 Identities=22% Similarity=0.292 Sum_probs=221.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++++ +++++.+.|+|+++||+||+.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus 3 ~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 3 CKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred cEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCccc
Confidence 899999987654 899999999999999999999999999999999886542 34688999999999999999999999
Q ss_pred CCCEEEEEe-------------------------------------------------cCCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||+|+.+. ..|+|+||+.++...++++|++
T Consensus 80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 999998741 1378999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++++++.++..++|+++.+..++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 9999999998999999998877788999999999986 9999999999999999 8999999999999999999998887
Q ss_pred CCC--CcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccC-CEEEEEecCCCC-ccccchhhHhhcceEEEEeecc
Q 024011 191 YKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
... .++.+.+.+.+++ ++|++||+.|.. .+..++++++++ |+++.+|..... ...++...+ .+++++.|++..
T Consensus 239 ~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 316 (369)
T cd08301 239 PKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFG 316 (369)
T ss_pred ccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecC
Confidence 654 3455666666655 799999999865 477889999995 999999987542 334444434 368999987653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=275.55 Aligned_cols=258 Identities=28% Similarity=0.363 Sum_probs=221.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++...+++ +++++.|.|.++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 3 ~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 3 CKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred cEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCC
Confidence 799999876653 88999999999999999999999999999999988654 34678999999999999999999999
Q ss_pred CCCEEEEEe-----------------------------------------------cCCeeeeEEeeeCCCeEECCCCCC
Q 024011 81 VGDQVCALL-----------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS 113 (274)
Q Consensus 81 ~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 113 (274)
+||+|++.. ..|+|+||+.++.+.++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999998741 147899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
+++++++.+++.++|+++.+..++++|++++|+|+ |++|++++++++..|+ +|+++++++++++.++++|++.+++..
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999998877788999999999985 9999999999999999 799999999999999999999888765
Q ss_pred CC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ++.+.+.+.++ .++|++||++|. ..+..++++++++ |+++.+|...+....++...++. ++++.|++..
T Consensus 238 ~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~ 312 (365)
T cd08277 238 DSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFG 312 (365)
T ss_pred cccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecC
Confidence 43 34666776666 579999999996 4568889999875 99999998654334555555654 7888887654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=275.50 Aligned_cols=257 Identities=28% Similarity=0.374 Sum_probs=216.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++...+++ +++++.|.|.|+++||+||+.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|+++++|+
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 3 CKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred ceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCccCC
Confidence 899998877654 8899999999999999999999999999999998876532 4688999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|++.. ..|+|+||+.++.+.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 999998641 12589999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++.+++++.++|+++.+...+++|+++||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~ 238 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 999999999999999998877788999999999986 9999999999999999 79999999999999999999999887
Q ss_pred CCC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 192 KTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 192 ~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
... ++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... .....+...++ ++.++.++.
T Consensus 239 ~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~ 313 (368)
T cd08300 239 KDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTA 313 (368)
T ss_pred cccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEE
Confidence 653 466777777765 89999999997 4678889999886 99999997642 22233333333 234555543
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=274.23 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=209.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhc-CCCCC-CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++.+++. +++++.+.| ++++||+|||.++|||++|++.+. |.++. ....|.++|||++|+|+++ ++++
T Consensus 5 ~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 5 TQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 68999987665 899999987 689999999999999999999875 33322 2346899999999999999 7889
Q ss_pred CCCCCEEEEE--------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 79 WKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 79 ~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
|++||+|+.. ..+|+|+||++++.+.++++|+++++++++ +..++.+
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~ 157 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAV 157 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHH
Confidence 9999999752 125999999999999999999999998765 5577889
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
+|+++.+ ....+|++++|+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.+++++.+ +.+..
T Consensus 158 a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~-~~~~~- 233 (343)
T PRK09880 158 AIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDH-YKAEK- 233 (343)
T ss_pred HHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHH-HhccC-
Confidence 9999854 45568999999996 9999999999999999 689999999999999999999999877655433 22222
Q ss_pred CCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 206 GKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 206 ~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|++||++|.. .+..+++.++++|+++.+|.... ...+++..++.+++++.|++..
T Consensus 234 -g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 234 -GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred -CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEeec
Confidence 2599999999974 57889999999999999997543 3467777888899999988653
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=275.03 Aligned_cols=257 Identities=27% Similarity=0.365 Sum_probs=213.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++.+...+..+.++..+++.|.|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 89 (360)
T PLN02586 11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFK 89 (360)
T ss_pred hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccC
Confidence 56666555555556888999999999999999999999999999998876542 24688999999999999999999999
Q ss_pred CCCEEEEEe-----------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 81 VGDQVCALL-----------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 81 ~Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+||+|+... .+|+|+||+++|.+.++++|+++++++++++.+...
T Consensus 90 vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 169 (360)
T PLN02586 90 EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGI 169 (360)
T ss_pred CCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchH
Confidence 999997421 158999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
|+|+++.....+++|++|+|.|+ |++|++++|+++..|+++++++.++++. +.++++|++.+++.... +.+.+.+
T Consensus 170 ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~---~~~~~~~ 245 (360)
T PLN02586 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP---EKMKAAI 245 (360)
T ss_pred HHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH---HHHHhhc
Confidence 99999866666789999999886 9999999999999999998888776654 45578999988875542 2344444
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+ ++|++||++|.. .+..++++++++|+++.+|.... ...++...++.+++.+.|+...
T Consensus 246 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~ 304 (360)
T PLN02586 246 G--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIG 304 (360)
T ss_pred C--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcC
Confidence 3 599999999974 57889999999999999997643 3467777778888888887653
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=278.47 Aligned_cols=234 Identities=22% Similarity=0.371 Sum_probs=196.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-------CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEec
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-------DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG 73 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-------~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 73 (274)
|||+++.++++ +++++.|.|+|+ +|||+|||.++|||++|++.+.|.++. ..|.++|||++|+|+++|
T Consensus 3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEc
Confidence 99999987764 889999999874 689999999999999999999886532 358899999999999999
Q ss_pred CCCCCCCCCCEEEEEe-------------------------------------cCCeeeeEEeeeCC--CeEECCCCCCH
Q 024011 74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL 114 (274)
Q Consensus 74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (274)
+++++|++||||+... .+|+|+||+++|.. .++++|++++.
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~ 157 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence 9999999999996521 25899999999964 79999998754
Q ss_pred ----HhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEE-EEecChhhHHHHHHcCCCEEE
Q 024011 115 ----KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF-VTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 115 ----~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~-~~~~~~~~~~~~~~~g~~~~~ 189 (274)
.+++++.+++.++|+++. ..++++|++++|.|+ |++|++++|+++..|++++ ++++++++++.++++|++.+.
T Consensus 158 ~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~ 235 (393)
T TIGR02819 158 LEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVD 235 (393)
T ss_pred cccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEe
Confidence 346678889999999884 578899999999775 9999999999999999754 456778899999999997543
Q ss_pred eCCCCcHHHHHHHHhCCCCccEEEECCChh---------------hHHHhhhccccCCEEEEEecCC
Q 024011 190 NYKTEDFVARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.....++.+.+.+.+++.++|++||++|.. .+..+++.++++|+++.+|...
T Consensus 236 ~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~ 302 (393)
T TIGR02819 236 LSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV 302 (393)
T ss_pred cCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence 333456667777777777899999999974 5888999999999999999863
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=274.16 Aligned_cols=254 Identities=21% Similarity=0.276 Sum_probs=204.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCC--CCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++..+ ++ +++++.|.|+|+++||+|||.++|||++|.+.+.|.++.. ...|.++|||++|+|+++|++ +.
T Consensus 1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 8999998543 33 8999999999999999999999999999999998875422 235789999999999999999 99
Q ss_pred CCCCCEEEEEe------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHH
Q 024011 79 WKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128 (274)
Q Consensus 79 ~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~ 128 (274)
|++||||+... .+|+|+||++++.+.++++|++++ + ++++..++.+++
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~ 155 (355)
T cd08230 78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVE 155 (355)
T ss_pred CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHH
Confidence 99999998642 248899999999999999999998 4 444556666655
Q ss_pred HHHHh------hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---ChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 129 STVFM------TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 129 ~~l~~------~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++.. ....++|++++|+|+ |++|++++|+++..|++|+++++ ++++++.++++|++.+ +...+++.+
T Consensus 156 ~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~~~~- 232 (355)
T cd08230 156 KAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTPVAE- 232 (355)
T ss_pred HHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccchhh-
Confidence 54422 123578999999996 99999999999999999999998 5788899999999874 554444433
Q ss_pred HHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCC-Cccccc----hhhHhhcceEEEEeecc
Q 024011 200 VKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELN----ITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~----~~~~~~~~~~i~g~~~~ 265 (274)
... ..++|+|||++|.. .+..+++.++++|+++.+|...+ ....++ ...++.+++++.|+...
T Consensus 233 -~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~ 301 (355)
T cd08230 233 -VKL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNA 301 (355)
T ss_pred -hhh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCC
Confidence 111 24699999999975 57889999999999999998765 233444 34577789999998654
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=270.30 Aligned_cols=258 Identities=33% Similarity=0.489 Sum_probs=223.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC---CC-------CCCCCCCCCCceeEEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY---PP-------PKGASPYPGLECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~---~~-------~~~~p~~~G~e~~G~V~ 70 (274)
|||+++.+++ .+++++.+.|+|+++||+||+.++++|++|.+.+.+.. +. ....|.++|||++|+|+
T Consensus 1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYHGRK---DIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEecCC---ceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 9999998765 38999999999999999999999999999998765421 10 11257899999999999
Q ss_pred EecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
++|++++.|++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+ .
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~ 156 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E 156 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence 9999999999999998621 1589999999999999999999999998755 6
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 123 ~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
+..++|+++ ...++++|++++|+|+ |++|.+++|+++..|+ +|+++++++++.+.++++|++.+++.+..++.+.+.
T Consensus 157 ~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~ 234 (351)
T cd08233 157 PLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVR 234 (351)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHH
Confidence 788999998 7788999999999986 8999999999999999 899999999999999999999999988888888888
Q ss_pred HHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+.++++++|++||+.|. ..+..++++++++|+++.+|... ....++...++.+++++.|+...
T Consensus 235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~ 298 (351)
T cd08233 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICY 298 (351)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEecc
Confidence 88877789999999985 46788999999999999999876 34567777788889999988654
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=267.62 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=212.2
Q ss_pred EEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 3 AIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 3 a~~~~~~~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|+.+..++.+ ..+++++.|.|+|+++||+|||.++|+|++|.+.+.|.++.. ..|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFA 79 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccC
Confidence 3556666654 469999999999999999999999999999999998876432 3478999999999999999999999
Q ss_pred CCCEEEEE----------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|+.. ..+|+|+||+.+|.+.++++|+++++++++.+.++..++|+++.
T Consensus 80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~ 159 (329)
T TIGR02822 80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL 159 (329)
T ss_pred CCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH
Confidence 99999742 12589999999999999999999999999999999999999984
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
..++++|++++|+|+ |++|.+++|+++..|++|+++++++++++.++++|++++++..+.. ..++|.+
T Consensus 160 -~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----------~~~~d~~ 227 (329)
T TIGR02822 160 -RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----------PEPLDAA 227 (329)
T ss_pred -hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----------cccceEE
Confidence 578999999999997 9999999999999999999999999999999999999988643211 1358988
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+++.+. ..+..++++++++|+++.+|........++...++.+++++.+++..
T Consensus 228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 281 (329)
T TIGR02822 228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN 281 (329)
T ss_pred EECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC
Confidence 888765 45788999999999999999754333356667777888999987653
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=270.64 Aligned_cols=256 Identities=27% Similarity=0.362 Sum_probs=213.8
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||+.+...+.+..++..+++.|+|+++||+|||.++|||++|++.+.|.++. ...|.++|||++|+|+++|+++++|++
T Consensus 6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCC
Confidence 5666665555556888899999999999999999999999999999886532 235789999999999999999999999
Q ss_pred CCEEEEE-----e------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 82 GDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 82 Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
||+|+.. + .+|+|+||+.+|.+.++++|+++++++++++.+...+
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 9999741 1 1589999999999999999999999999999999999
Q ss_pred HHHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
+|+++..... .++|++++|.|+ |++|++++|+++..|++|+++++++++ .+.++++|++++++..+. +.+.+.+
T Consensus 165 a~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~---~~v~~~~ 240 (375)
T PLN02178 165 VYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS---QKMKEAV 240 (375)
T ss_pred HHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH---HHHHHhh
Confidence 9998855433 368999999986 999999999999999999998877554 677789999988875542 3444544
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+ ++|++||++|.. .+..++++++++|+++.+|.... ...++...++.+++++.|+...
T Consensus 241 ~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 241 G--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred C--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCcc
Confidence 3 599999999976 57889999999999999997643 3467778888899999998764
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=267.11 Aligned_cols=258 Identities=33% Similarity=0.488 Sum_probs=211.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCC-CCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++..+++. .++++.+.|.+.|+||+|||.++|||+||++.+++..+... .+. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~-~~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVP-PGDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCC-CCCcccCccceEEEEEec-cccCC
Confidence 888888877653 33666666668999999999999999999999999765433 233 89999999999999 77889
Q ss_pred CCCCEEEEEe--------------------------------cCCeeeeEEeeeCCCe-EECCCCCCHHhhccCcchHHH
Q 024011 80 KVGDQVCALL--------------------------------GGGGYAEKVAVPAGQV-LPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 80 ~~Gd~V~~~~--------------------------------~~g~~~~~~~~~~~~~-~~~p~~~~~~~aa~l~~~~~~ 126 (274)
++||||+... .+|+|+||+.+|.+.+ .++|+++ +.+.+++..++.+
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~ 155 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLAT 155 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhh
Confidence 9999997521 2589999999997554 5557887 5555568899999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHh
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
++++.......+++.+++|+|+ |++|++++++++..|+ +|+++++++++++.+++ .+++.+.+...++....+.+.+
T Consensus 156 ~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t 234 (350)
T COG1063 156 AYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234 (350)
T ss_pred hhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHh
Confidence 9877545555666669999997 9999999999999998 78888999999999998 6666666655556677777888
Q ss_pred CCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.++|++|+|+|... +..+++.++++|+++.+|........++...++.+++++.|++.
T Consensus 235 ~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccC
Confidence 8889999999999654 78899999999999999998765335778889999999999965
|
|
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=251.31 Aligned_cols=258 Identities=26% Similarity=0.337 Sum_probs=225.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+||++..+++.| |.++++.+.+|+.+||+||+.++++|++|.+.+.|..+ ...+|.++|||.+|+|+.+|++|+.++
T Consensus 8 CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVESvGegV~~vk 84 (375)
T KOG0022|consen 8 CKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVESVGEGVTTVK 84 (375)
T ss_pred EeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEEEecCCccccC
Confidence 689999999988 99999999999999999999999999999999999874 446799999999999999999999999
Q ss_pred CCCEEEEEec-------------------------------------------------CCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||+|+.+.. -.+|+||.+++...++++++.
T Consensus 85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~ 164 (375)
T KOG0022|consen 85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS 164 (375)
T ss_pred CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence 9999986320 138999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
.+++.++.|.+...|.|.|..+.+++++|+++.|+|- |++|+++++-++..|+ +++.++.++++.+.++++|+...+|
T Consensus 165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN 243 (375)
T KOG0022|consen 165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN 243 (375)
T ss_pred CChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence 9999999999999999999999999999999999996 9999999999999999 9999999999999999999999887
Q ss_pred CCC--CcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 191 YKT--EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
..+ ....+.+.+.++ .|+|+-|+|.|... +.+++.+...+ |+-+.+|.... ....+.+..++. +.++.|+.-
T Consensus 244 p~d~~~~i~evi~EmTd-gGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs~F 320 (375)
T KOG0022|consen 244 PKDLKKPIQEVIIEMTD-GGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGSAF 320 (375)
T ss_pred hhhccccHHHHHHHHhc-CCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEEec
Confidence 763 236677777887 58999999999854 78888888777 99999998764 344555555554 666666653
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=265.89 Aligned_cols=255 Identities=25% Similarity=0.320 Sum_probs=212.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++. +++++.|.|.| +++||+|||.++++|++|.+.+..... ...|.++|||++|+|+++|+++++|
T Consensus 1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~ 75 (347)
T PRK10309 1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDL 75 (347)
T ss_pred CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCC
Confidence 99999998664 89999999987 699999999999999999975432111 1247899999999999999999999
Q ss_pred CCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
++||+|+++. .+|+|++|+.+|.+.++++|+++++++++.+. ++.++++++
T Consensus 76 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~- 153 (347)
T PRK10309 76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF- 153 (347)
T ss_pred CCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-
Confidence 9999998752 25899999999999999999999999998663 566677775
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc-
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD- 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d- 210 (274)
....+++|++++|+|+ |++|++++|+++..|++ |+++++++++++.++++|++.+++.+..+ .+++.+.+.+.++|
T Consensus 154 ~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~~~~~~~~d~ 231 (347)
T PRK10309 154 HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQSVLRELRFDQ 231 (347)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHHHHhcCCCCCe
Confidence 5567889999999985 99999999999999996 78888999999999999999988876655 55677777666788
Q ss_pred EEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccc---hhhHhhcceEEEEeecc
Q 024011 211 VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 211 ~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~ 265 (274)
++|||+|.. .+..++++++++|+++.+|...+. ..++ +..++.+++++.|++..
T Consensus 232 ~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 232 LILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LHLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cccChhhhhHHhhcCcEEEEEecc
Confidence 999999974 578899999999999999976543 2232 23567889999998753
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=263.56 Aligned_cols=258 Identities=25% Similarity=0.331 Sum_probs=212.4
Q ss_pred EEEEEcCCCCCcceEEEeecC----CCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCce--eEEEEEecCC
Q 024011 2 KAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC--SGTILSVGKN 75 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~----~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~ 75 (274)
|++....+. ++.|++++.+. |+|++|||||||++++||+.|++...|........|.++|+++ .|.+..+|++
T Consensus 9 ~~~~~~~~~-~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 9 KAYVTGFPK-ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred ecCCCCCCC-ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 455533333 45699999987 8899999999999999999999988875432124577889865 3455567888
Q ss_pred CCCCCCCCEEEEEecCCeeeeEEeeeC-CCeEECC-CCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchH
Q 024011 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVP-SGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152 (274)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~i 152 (274)
++.|++||+|+++ |+|+||+++|. ..++++| ++++++ +++++++++.|+|+++.+..++++|++++|+|++|++
T Consensus 88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v 164 (338)
T cd08295 88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV 164 (338)
T ss_pred CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence 8899999999876 68999999999 7999995 678886 7888999999999999888899999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 153 G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
|.+++|+|+..|++|+++++++++.+.+++ +|++.+++++. .++.+.+.+.++ .++|++||+.|+..+..+++++++
T Consensus 165 G~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~l~~ 243 (338)
T cd08295 165 GQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKMLDAVLLNMNL 243 (338)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHHHHHHHHHhcc
Confidence 999999999999999999999999999988 99999988654 467777777665 689999999998888999999999
Q ss_pred CCEEEEEecCCCCcc-----ccchhhHhhcceEEEEeec
Q 024011 231 DGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 231 ~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+++.+|....... ..+...++.+++++.+++.
T Consensus 244 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 282 (338)
T cd08295 244 HGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLV 282 (338)
T ss_pred CcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEe
Confidence 999999987543221 1234556677788887553
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=266.18 Aligned_cols=256 Identities=25% Similarity=0.409 Sum_probs=216.7
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 024011 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (274)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (274)
+++++++++ +++++.|.|.|+++||+|||.++|+|++|++.+.+........|.++|||++|+|+++|+++..+ +||
T Consensus 2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 466666654 88899999999999999999999999999998754433223457899999999999999999877 999
Q ss_pred EEEEE---------------------------ecCCeeeeEEeeeCCCeEECCC------CCCHHhhccCcchHHHHHHH
Q 024011 84 QVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPS------GVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 84 ~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~l~~~~~~a~~~ 130 (274)
+|+.. ..+|+|+||+.+|.+.++++|+ ++++++++.+.+++.++|++
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 99862 1358999999999999999999 89999999899999999999
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC---cHHHHHHHHhCCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGK 207 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ 207 (274)
+. ...+++|++++|+|+ |++|++++|+++..|++|+++++++++++.++++|++.+++.... ++.+.+.+.+++.
T Consensus 159 ~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~ 236 (349)
T TIGR03201 159 AV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKAR 236 (349)
T ss_pred HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccC
Confidence 85 478899999999998 999999999999999999999999999999999999988876553 4566677777767
Q ss_pred Ccc----EEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 208 GVD----VILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 208 ~~d----~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++| .+||++|... ...++++++++|+++.+|..... ..+++..++.+++++.|++..
T Consensus 237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~~ 298 (349)
T TIGR03201 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWGC 298 (349)
T ss_pred CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEecC
Confidence 786 8999999754 66789999999999999986543 356667777778888888753
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=260.44 Aligned_cols=264 Identities=42% Similarity=0.726 Sum_probs=231.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..+++...+++++.+.|++.++||+||+.++++|+.|.....+.++.....|.++|||++|+|+++|++++.++
T Consensus 2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 81 (334)
T PTZ00354 2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK 81 (334)
T ss_pred cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 99999999887667888888888889999999999999999999998876654444567899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|++++.+.++++|+++++++++.+..+..++|+++.....+++|++++|+|++|++|+++++++
T Consensus 82 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a 161 (334)
T PTZ00354 82 EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLA 161 (334)
T ss_pred CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 99999998667999999999999999999999999999999999999999878788999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCc-HHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+..|++++++++++++.+.++++|.+.+++....+ +.+.+.+.++++++|+++++.|+..+...++++.++|+++.++.
T Consensus 162 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~ 241 (334)
T PTZ00354 162 EKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF 241 (334)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEec
Confidence 99999988899999999999999998888776554 77778877777789999999998888899999999999999986
Q ss_pred CCCCccc-cchhhHhhcceEEEEeec
Q 024011 240 QGGAKTE-LNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~-~~~~~~~~~~~~i~g~~~ 264 (274)
....... ++...++.++.++.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 242 MGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred CCCCcccccCHHHHHhhCCEEEeeec
Confidence 5543333 666667777778877653
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=263.00 Aligned_cols=263 Identities=30% Similarity=0.423 Sum_probs=227.4
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCC-CeEEEEEeeeecChhhhHhhcCCCCCCCC----CCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKG----ASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~-~ev~V~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~ 74 (274)
|||++++.++.+ +.+++++.|.|.|.+ +||+||+.++++|++|...+.|..+.... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 999999988765 468899999998887 99999999999999999998886643222 567899999999999999
Q ss_pred CCCCCCCCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHH
Q 024011 75 NVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153 (274)
Q Consensus 75 ~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG 153 (274)
++..|++||+|++.. .+|+|++|+.++.+.++++|+++++++++.++++..++|+++.....+++|++++|+|++|++|
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg 160 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG 160 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence 999999999999875 3689999999999999999999999999999999999999987777889999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCh----hhHHHHHHcCCCEEEeCCCC---cHHHHHHHHhCCCCccEEEECCChhhHHHhhh
Q 024011 154 TFAIQMGKCQGVRVFVTAGSE----EKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGVDVILDCMGASYFQRNLG 226 (274)
Q Consensus 154 ~~~~~~~~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~ 226 (274)
++++++++..|++++++++++ ++.+.++++|++.+++.+.. ++...+....++ ++|.++|+.|+......++
T Consensus 161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~ 239 (341)
T cd08290 161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELAR 239 (341)
T ss_pred HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHH
Confidence 999999999999999988776 56778888999998887665 677777776665 7999999999877788899
Q ss_pred ccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+++++|+++.+|........++...++.++.++.+...
T Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (341)
T cd08290 240 LLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWL 277 (341)
T ss_pred HhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEec
Confidence 99999999999865443345566566788888888764
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=265.66 Aligned_cols=244 Identities=19% Similarity=0.245 Sum_probs=198.1
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCC---CCCCCCCCCceeEEEEEecCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|+++++++++ +++++.+.|+ +++||+|||.++|||++|++.+.|.+... ..+|.++|||++|+|+++|.+ .
T Consensus 4 ~~~~~~~~~~---~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 4 QVYRLVRPKF---FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cceEEeccce---EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 5778876654 9999999995 99999999999999999999999875321 246899999999999998764 7
Q ss_pred CCCCCEEEEEe------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhh
Q 024011 79 WKVGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134 (274)
Q Consensus 79 ~~~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~ 134 (274)
|++||||+... .+|+|+||+.+|.+.++++|+++++++|+ +..+++++++++...
T Consensus 78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~ 156 (341)
T cd08237 78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRF 156 (341)
T ss_pred cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHH
Confidence 99999997631 35899999999999999999999999877 556888899888543
Q ss_pred --cCCCCCCEEEEecCCchHHHHHHHHHHH-cC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 135 --SHLSPGESFLVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 135 --~~~~~g~~vlI~Ga~g~iG~~~~~~~~~-~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
..+++|++++|+|+ |++|++++|++++ .| .+|+++++++++++.+++.+.+...+ + . ....++|
T Consensus 157 ~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~----~---~~~~g~d 224 (341)
T cd08237 157 EQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----D----I---PEDLAVD 224 (341)
T ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----h----h---hhccCCc
Confidence 35688999999996 9999999999986 55 58999999999999888766543221 1 1 1123599
Q ss_pred EEEECCCh----hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 211 VILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 211 ~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++||++|+ ..+..+++.++++|+++.+|.... ...++...++.+++++.|+...
T Consensus 225 ~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~ 282 (341)
T cd08237 225 HAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRS 282 (341)
T ss_pred EEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEeccc
Confidence 99999995 247889999999999999997543 3466777788899999998653
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=262.35 Aligned_cols=260 Identities=29% Similarity=0.475 Sum_probs=222.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC---
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--- 78 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~--- 78 (274)
|++++.++++ .+++++.+.|.|+++||+||+.++++|++|++...|.++. ...|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccccc
Confidence 7899998874 4999999999999999999999999999999998887652 345789999999999999999986
Q ss_pred ---CCCCCEEEEEe----------------------------------cCCeeeeEEeeeCC-CeEECCCCCCHHhhccC
Q 024011 79 ---WKVGDQVCALL----------------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 79 ---~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l 120 (274)
|++||+|+.+. .+|+|++|+.++.+ .++++|++++.++++.+
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999998762 25899999999986 79999999999999988
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcH---
Q 024011 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF--- 196 (274)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 196 (274)
++++.++|+++.+....++|+++||+|+ |++|++++++|+..|+ +|+++++++++.+.++++|.+.+++.+..++
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence 8999999999977776779999999985 9999999999999999 9999999999999999999988887665433
Q ss_pred HHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeecc
Q 024011 197 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
...+.+.++++++|++||+.|+ ..+..+++.++++|+++.+|.... ....++...++.+++++.+++..
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNY 308 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccC
Confidence 2467777777789999999986 457888999999999999987642 23345555568888999888754
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=258.96 Aligned_cols=255 Identities=31% Similarity=0.501 Sum_probs=222.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++ .+++++.|.|+++++||+||+.++++|++|+..+.|..+. ...|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGG--PLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCC--CceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccCC
Confidence 99999998754 3889999999999999999999999999999998886543 23578899999999999999999999
Q ss_pred CCCEEEE----------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++ +..+|++++|+.++...++++|+++++++++.++++..++|+++.
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~ 157 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR 157 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 9999986 222588999999999999999999999999999999999999985
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.. .++++++++|+| +|++|.+++++++..|++++++++++++++.++++|++.+++....++.+.+.+. .++|++
T Consensus 158 ~~-~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~~~d~v 232 (333)
T cd08296 158 NS-GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL---GGAKLI 232 (333)
T ss_pred hc-CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc---CCCCEE
Confidence 54 889999999999 6999999999999999999999999999999999999998888776776666654 359999
Q ss_pred EECCC-hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+.| ...+...++.++++|+++.+|... ....++...++.+++++.++..
T Consensus 233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~ 284 (333)
T cd08296 233 LATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPS 284 (333)
T ss_pred EECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCc
Confidence 99986 456788999999999999999865 3345666677788999998764
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=255.62 Aligned_cols=263 Identities=33% Similarity=0.508 Sum_probs=228.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||+++++++.+..+++.+.+.|.+.++||+||+.++++|++|++...|..+. ....|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 89999998877777888888887789999999999999999999988775432 2345678999999999999999999
Q ss_pred CCCCCEEEEEe--cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHH
Q 024011 79 WKVGDQVCALL--GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (274)
Q Consensus 79 ~~~Gd~V~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~ 156 (274)
+++||+|+++. .+|+|++|+.++...++++|+++++++++.+++.++++| ++.+..+++++++++|+|+++++|.++
T Consensus 81 ~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~ 159 (324)
T cd08244 81 AWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLL 159 (324)
T ss_pred CCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHH
Confidence 99999999875 268999999999999999999999999999999999995 455778899999999999999999999
Q ss_pred HHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEE
Q 024011 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 157 ~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (274)
+++++..|++++++++++++.+.+++++.+.+++....++.+.+.+.++++++|+++|+.|+......+++++++|+++.
T Consensus 160 ~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~ 239 (324)
T cd08244 160 VQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT 239 (324)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEE
Confidence 99999999999999999999999999999888888777788888877777789999999998878889999999999999
Q ss_pred EecCCCCccccchhhHhhcceEEEEeec
Q 024011 237 IGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|........++...++.+++++.++..
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08244 240 YGWASGEWTALDEDDARRRGVTVVGLLG 267 (324)
T ss_pred EecCCCCCCccCHHHHhhCCcEEEEeec
Confidence 9876544334555566778888887654
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=260.24 Aligned_cols=242 Identities=18% Similarity=0.266 Sum_probs=194.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecC-hhhhHhhcCCCCCC--CCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALN-RADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
||++++.+++ .+++++.+.|+|++|||+|||.++||| ++|++.+.|.++.. ..+|.++|||++|+|+++|+++
T Consensus 2 ~ka~~~~~~~---~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v- 77 (308)
T TIGR01202 2 TQAIVLSGPN---QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT- 77 (308)
T ss_pred ceEEEEeCCC---eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence 7999998655 499999999999999999999999996 69999888876532 2568999999999999999998
Q ss_pred CCCCCCEEEEEe---------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecC
Q 024011 78 RWKVGDQVCALL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148 (274)
Q Consensus 78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga 148 (274)
.|++||||+... .+|+|+||+.+|.+.++++|++++++. +.+ +++.++|+++.+ . ..++++++|+|+
T Consensus 78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G~ 153 (308)
T TIGR01202 78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLIVGH 153 (308)
T ss_pred CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEEECC
Confidence 699999998632 159999999999999999999999865 434 567899999855 2 336889999985
Q ss_pred CchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhh
Q 024011 149 SSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLG 226 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~ 226 (274)
|++|++++|+++.+|++ |+++++++++++.+... .++|.... .+.++|++||++|.. .+..+++
T Consensus 154 -G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----------~~~g~Dvvid~~G~~~~~~~~~~ 219 (308)
T TIGR01202 154 -GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD----------PRRDYRAIYDASGDPSLIDTLVR 219 (308)
T ss_pred -CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc----------cCCCCCEEEECCCCHHHHHHHHH
Confidence 99999999999999997 55566666676655442 33332211 234699999999985 4788999
Q ss_pred ccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+++++|+++++|.... ...+++..++.+++++.++...
T Consensus 220 ~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 220 RLAKGGEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred hhhcCcEEEEEeecCC-CcccccchhhhcceEEEEeccc
Confidence 9999999999998654 3466777788888999887653
|
|
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=261.21 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=214.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+++++++.+++. +++++.+.|+|+++||+|||.++++|++|++.+.|.++. ...|.++|||++|+|+++|+++++|+
T Consensus 10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCccccc
Confidence 578899988864 899999999999999999999999999999998886543 23578999999999999999999999
Q ss_pred CCCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 81 VGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+||+|+.. ..+|+|+||+.+|...++++|+++++++++.+++++.
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999741 1258999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
++|+++......++|++++|+|+ |++|++++|+++..|++++++++++++++.+ +++|++.+++.... +.+.+.+
T Consensus 167 ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~---~~~~~~~ 242 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA---AEMQEAA 242 (357)
T ss_pred HHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh---HHHHHhc
Confidence 99999876666689999999975 9999999999999999999888887776554 56999877654432 2344443
Q ss_pred CCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
. ++|++||+.|. ..++.++++++++|+++.+|.... ...++...++.+++++.|++..
T Consensus 243 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~ 301 (357)
T PLN02514 243 D--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIG 301 (357)
T ss_pred C--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecC
Confidence 2 59999999996 457889999999999999998653 3467777788889999998754
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=265.50 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=209.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhh-cCCCCC-----CCCCCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-----PKGASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e~~G~V~~vG~ 74 (274)
||++++.+++. +++++.|.|+|+++||+|||.++|||++|++.+ .|.... ....|.++|||++|+|+++|+
T Consensus 3 ~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 3 TKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred cEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 78999987764 999999999999999999999999999999976 443211 013578999999999999999
Q ss_pred CCC-CCCCCCEEEEEe----------------cCCeeeeEEeeeCC----CeEECCCCCCHHhhccCcchHHH---HHHH
Q 024011 75 NVS-RWKVGDQVCALL----------------GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACT---VWST 130 (274)
Q Consensus 75 ~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~---a~~~ 130 (274)
+++ .|++||||+... .+|+|+||+++|.+ .++++|+++++++++.+. ++.+ ++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a 158 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTA 158 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhh
Confidence 998 699999998742 25899999999987 689999999999988542 3222 3333
Q ss_pred H--------HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---eEEEEecChhhHHHHHHc--------CCC-EEEe
Q 024011 131 V--------FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDL--------GAD-VCIN 190 (274)
Q Consensus 131 l--------~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~---~v~~~~~~~~~~~~~~~~--------g~~-~~~~ 190 (274)
+ .+..++++|++++|+|++|++|++++|+++..|+ +|+++++++++++.++++ |++ .+++
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~ 238 (410)
T cd08238 159 NYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVN 238 (410)
T ss_pred cccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEEC
Confidence 2 2456789999999999889999999999999864 799999999999999886 655 4566
Q ss_pred CCC-CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCC-C-CccccchhhHhhcceEEEEeecc
Q 024011 191 YKT-EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-G-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~-~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
... .++.+.+.+.+++.++|++|+++|. ..+..++++++++|+++.++... . ....++...++.+++++.|+...
T Consensus 239 ~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 317 (410)
T cd08238 239 PATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG 317 (410)
T ss_pred CCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCC
Confidence 544 5677777777877789999999985 55788999999999888775432 1 12457777888899999998753
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=257.98 Aligned_cols=258 Identities=29% Similarity=0.459 Sum_probs=223.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++++++++ +++.+.+.|++.++||+||+.++++|++|.....|.++ ....+|.++|+|++|+|+++|+++..
T Consensus 1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 899999987654 88889999999999999999999999999999888765 23456789999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
|++||+|+++. .+|+|++|+.++.+.++++|+++++++++.++..+.+||+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l 158 (340)
T cd05284 79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158 (340)
T ss_pred CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999998763 258999999999999999999999999999999999999998
Q ss_pred Hhh-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 132 FMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 132 ~~~-~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
... ..+.++++++|+|+ +++|++++++++..| .+|+++++++++.+.++++|.+++++.+.. +.+++.+..++.++
T Consensus 159 ~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~~ 236 (340)
T cd05284 159 KKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRGA 236 (340)
T ss_pred HHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCCC
Confidence 665 46788999999996 669999999999999 799999999999999999999998887776 77788877776789
Q ss_pred cEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 210 d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+++|+.|+ ......+++++++|+++.+|.... ..++....+.+++++.++..
T Consensus 237 dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 237 DAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred CEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEec
Confidence 999999996 568889999999999999987653 34444444567888877653
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=259.28 Aligned_cols=258 Identities=30% Similarity=0.465 Sum_probs=224.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++++ +++++.+.|.+.++||+||+.++++|++|++...|.++ ...|.++|||++|+|+++|++++.++
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 3 TTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred cEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEEEeCCCcccCC
Confidence 899999987654 78899999999999999999999999999999888664 23578899999999999999999999
Q ss_pred CCCEEEEE-------------------------------------------------ecCCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||+|++. ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999851 12478999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++++.++++..+++.++.....+++|++++|+|+ |++|++++++++..|+ +++++++++++.+.+++++++.+++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 9999999999999999998878888999999999975 9999999999999999 5888888999999889999999888
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCC-CCccccchhhHhhcceEEEEeec
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.+..++.+.+.+.+ ++++|+++|++|. ..+..+++.++++|+++.+|... .....++...++.+++++.++..
T Consensus 238 ~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (365)
T cd08278 238 PKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE 312 (365)
T ss_pred CCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence 87777878888777 6689999999986 55788999999999999998753 23345666666678888887653
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=253.34 Aligned_cols=265 Identities=60% Similarity=0.979 Sum_probs=233.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++.+++.++.+++++.+.|.+.++||+||+.++++|++|.+...+.++.....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 99999999887777888888888889999999999999999999988776654445678999999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|+.++.+.++++|+++++++++.+..+..++++++.+...+.++++++|+|+++++|+++++++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~ 160 (323)
T cd05276 81 VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLA 160 (323)
T ss_pred CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHH
Confidence 99999998767999999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++++++++++++.+.+++++.+.+++....++.+.+.+...+.++|+++++.|+......+++++++|+++.++..
T Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 161 KALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL 240 (323)
T ss_pred HHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecC
Confidence 99999999999999999888888888888877767777777777667899999999988788889999999999999876
Q ss_pred CCCccccchhhHhhcceEEEEeecc
Q 024011 241 GGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
......++...++.+++++.++...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 241 GGAKAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCCCCCCchHHHHHhCCeEEEeecc
Confidence 5443455666666788888887643
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=255.26 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=211.9
Q ss_pred CEEEEEcCC--CCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCC
Q 024011 1 MKAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76 (274)
Q Consensus 1 m~a~~~~~~--~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~ 76 (274)
||+|++.++ +++ +.+++++.+.|+|++|||+|||.+++||+.|.+.... ....|.++|+|++|+|++ .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc----CCCCCcEecceEEEEEec---CC
Confidence 899999993 554 7799999999999999999999999999987652211 113578899999999985 45
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCC---CeEECCCCCC-----HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecC
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVS-----LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga 148 (274)
+.|++||+|+++ ++|++|++++.+ .++++|++++ ...+++++.+++|+|+++.+..++++|+++||+|+
T Consensus 76 ~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga 152 (329)
T cd08294 76 SKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGA 152 (329)
T ss_pred CCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 679999999886 479999999999 9999999988 23334678899999999988889999999999999
Q ss_pred CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcc
Q 024011 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 228 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l 228 (274)
+|++|.+++|+++..|++|+++++++++.+.++++|++.+++.+..++.+.+.+.++ +++|++||+.|+..+...++++
T Consensus 153 ~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~~~~~~~~~~l 231 (329)
T cd08294 153 AGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGGEFSSTVLSHM 231 (329)
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999888888888877665 6799999999998889999999
Q ss_pred ccCCEEEEEecCCCCcc------ccchhhHhhcceEEEEeec
Q 024011 229 NIDGRLFIIGTQGGAKT------ELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 229 ~~~g~~v~~g~~~~~~~------~~~~~~~~~~~~~i~g~~~ 264 (274)
+++|+++.+|....... ......+..+++++.++..
T Consensus 232 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 273 (329)
T cd08294 232 NDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIV 273 (329)
T ss_pred ccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEh
Confidence 99999999985432110 1223446667788887653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=259.57 Aligned_cols=226 Identities=22% Similarity=0.301 Sum_probs=193.2
Q ss_pred CcceEEEeecCCCCC-CCeEEEEEeeeecChhhhHhhcCCC--CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE
Q 024011 12 PEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88 (274)
Q Consensus 12 ~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~ 88 (274)
++.+++++.+.|+|. +|||+|||.++|||+.|........ .....+|.++|||++|+|+++|+++++|++||+|+++
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 367899999999874 9999999999999999864332111 1112357789999999999999999999999999876
Q ss_pred ecCCeeeeEEeeeCCCeEECCCCCCHHh----hccCcchHHHHHHHHHhhcCCCCC--CEEEEecCCchHHHHHHHHHHH
Q 024011 89 LGGGGYAEKVAVPAGQVLPVPSGVSLKD----AAAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKC 162 (274)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~g--~~vlI~Ga~g~iG~~~~~~~~~ 162 (274)
. +.|+||++++.+.++++|+++++++ +++++.++.++|+++.+..++++| +++||+|++|++|.+++|+++.
T Consensus 100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~ 177 (345)
T cd08293 100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL 177 (345)
T ss_pred C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 3 6799999999999999999864332 445778899999998777788876 9999999999999999999999
Q ss_pred cCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 163 QGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 163 ~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.|+ +|+++++++++.+.+++ +|++.+++....++.+.+.+.++ +++|++||++|+..+..++++++++|+++.+|..
T Consensus 178 ~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 178 LGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence 999 89999999999988876 99999999888888888887765 6899999999988788999999999999999853
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=257.15 Aligned_cols=260 Identities=31% Similarity=0.472 Sum_probs=218.6
Q ss_pred CEEEEEcCCCCCcceEEEe-ecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-------------------CCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQE-VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------------------PKGASPY 60 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~~ 60 (274)
||++++..++.++.+++.+ .+.|.+.+++|+|||.++++|++|.+...|.++. ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 8999999877666677764 4777789999999999999999999988775431 2346789
Q ss_pred CCCceeEEEEEecCCCCCCCCCCEEEEEe-------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCc
Q 024011 61 PGLECSGTILSVGKNVSRWKVGDQVCALL-------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121 (274)
Q Consensus 61 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~ 121 (274)
+|||++|+|+++|+++++|++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+.
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 99999999999999999999999998741 25899999999999999999999999999999
Q ss_pred chHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
++..++|+++ ....+++|++++|+|++|++|++++++++..|++++++++++ +.+.++++|++.+.+.......+ .
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~--~ 236 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLAD--A 236 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHH--H
Confidence 9999999988 677899999999999999999999999999999999888665 77888889987665544444333 4
Q ss_pred HHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 202 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
..+.++++|++||+.|+..+..++++++++|+++.+|........++...++.+++++.++..
T Consensus 237 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
T cd08274 237 KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTL 299 (350)
T ss_pred HhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeec
Confidence 555667899999999988889999999999999999876443345667777788888887664
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=253.79 Aligned_cols=260 Identities=25% Similarity=0.379 Sum_probs=219.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.+++++.+++++.|.|.++++||+||+.++++|++|+....|.++.....|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 999999999876679999999999999999999999999999999988876543445778999999999998 466799
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC--C-CCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--S-PGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~--~-~g~~vlI~Ga~g~ 151 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++++++.+++.+.+++.++...... + .+++++|+|++|+
T Consensus 79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~ 158 (325)
T cd05280 79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGG 158 (325)
T ss_pred CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccH
Confidence 999999863 368999999999999999999999999999999999999988654433 5 3579999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|++++++++..|++|+++++++++.+.++++|++.+++.... .....+...++++|+++|+.|+..+...+++++++
T Consensus 159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~ 236 (325)
T cd05280 159 VGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYG 236 (325)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999888775432 12333444445799999999988889999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+++.+|........++...++.+++++.++..
T Consensus 237 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 237 GVVASCGNAAGPELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred CEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence 999999976543334555556678888887654
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=254.94 Aligned_cols=262 Identities=31% Similarity=0.482 Sum_probs=227.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++ +..+++++.+.|.|.++||+||+.++++|++|...+.+.++.....|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 9999999877 445999999999999999999999999999999998887654444567889999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|+... ..|+|++|+.++.+.++++|+++++++++.++....++|+++.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~ 159 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK 159 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence 999998742 2588999999999999999999999999999999999999986
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
. .+++++++++|+|+++++|++++++++..|++|+++++++++.+.++++|.+.+++.+..++.+.+.+..+++++|++
T Consensus 160 ~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~v 238 (341)
T cd08297 160 K-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAV 238 (341)
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEE
Confidence 5 488999999999998889999999999999999999999999999989999998888777888888888877789999
Q ss_pred EECCC-hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+.+ .......+++++++|+++.+|........++...++.+++++.+...
T Consensus 239 l~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 239 VVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred EEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEecc
Confidence 99665 45678889999999999999876543335566666778888887543
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=253.58 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=215.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++++..+++++.+.|.|.++||+||+.++++|++|.....+.......+|.++|||++|+|+++| ++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 9999999988777789999999999999999999999999999876643222122347889999999999854 57799
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhc--C-CCCCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--H-LSPGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~--~-~~~g~~vlI~Ga~g~ 151 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++++++.++++..++|.++.... . ...+++++|+|++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~ 158 (326)
T cd08289 79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGG 158 (326)
T ss_pred CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCch
Confidence 999999874 3699999999999999999999999999999999999998875432 2 334789999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|.+++++++..|++|+++++++++.+.++++|.+.+++.+.. ..+.+.+. .+.++|+++|+.|+......+++++++
T Consensus 159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~~~~d~vld~~g~~~~~~~~~~l~~~ 236 (326)
T cd08289 159 VGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPL-EKQRWAGAVDPVGGKTLAYLLSTLQYG 236 (326)
T ss_pred HHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhh-ccCCcCEEEECCcHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999888876543 23444444 345799999999988888999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|.........+...++.+++++.++.
T Consensus 237 G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 237 GSVAVSGLTGGGEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred CEEEEEeecCCCCCCcchhhhhhccceEEEEE
Confidence 99999997654333444666668888888874
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=260.12 Aligned_cols=264 Identities=28% Similarity=0.466 Sum_probs=221.0
Q ss_pred CEEEEEc--CCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC---------CCCCCCCCCCceeEE
Q 024011 1 MKAIVIT--QPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGASPYPGLECSGT 68 (274)
Q Consensus 1 m~a~~~~--~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~---------~~~~p~~~G~e~~G~ 68 (274)
||+++++ .++++ ..+++++.+.|.++++||+||+.++++|++|++...+.... ....+.++|||++|+
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~ 92 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGI 92 (393)
T ss_pred hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEE
Confidence 7898885 34444 35889999999999999999999999999999887664110 011235889999999
Q ss_pred EEEecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccC
Q 024011 69 ILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 69 V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 120 (274)
|+++|++++.+++||+|+++. .+|+|++|++++...++++|+++++++++.+
T Consensus 93 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l 172 (393)
T cd08246 93 VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAY 172 (393)
T ss_pred EEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhh
Confidence 999999999999999998874 2489999999999999999999999999999
Q ss_pred cchHHHHHHHHHhh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC----
Q 024011 121 PEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---- 194 (274)
Q Consensus 121 ~~~~~~a~~~l~~~--~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---- 194 (274)
++++.+||+++... +++++|++++|+|+.|++|++++++++..|++++++++++++.+.++++|++.+++.+..
T Consensus 173 ~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~ 252 (393)
T cd08246 173 MLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWG 252 (393)
T ss_pred cccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccccccccc
Confidence 99999999998654 678999999999999999999999999999999999999999999999999888875322
Q ss_pred ------------------cHHHHHHHHhCCC-CccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhc
Q 024011 195 ------------------DFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 255 (274)
Q Consensus 195 ------------------~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 255 (274)
.+.+.+.+.+++. ++|++||+.|...+...+++++++|+++.+|........++...++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~ 332 (393)
T cd08246 253 VLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMR 332 (393)
T ss_pred ccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhh
Confidence 2456667777766 899999999987788899999999999999876543345666667777
Q ss_pred ceEEEEeec
Q 024011 256 RLTVQGIVP 264 (274)
Q Consensus 256 ~~~i~g~~~ 264 (274)
+.++.++..
T Consensus 333 ~~~i~g~~~ 341 (393)
T cd08246 333 QKRIQGSHF 341 (393)
T ss_pred eeEEEeccc
Confidence 888877643
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=252.88 Aligned_cols=260 Identities=21% Similarity=0.292 Sum_probs=211.2
Q ss_pred CEEEEEcCC-C---CCcceEEEee---cCC-CCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCC--ceeEEEE
Q 024011 1 MKAIVITQP-G---SPEVLQLQEV---EDP-QIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL--ECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~-~---~~~~~~~~~~---~~~-~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~ 70 (274)
+|.+++..+ . .++.|++++. +.| ++++||||||+.++++|+.|.....+... ....|.++|+ |++|+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~ 87 (348)
T PLN03154 9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSK 87 (348)
T ss_pred ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEE
Confidence 366777432 1 2356888774 555 35899999999999999998765433222 1134788998 8899999
Q ss_pred EecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCC--eE--ECCCCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEE
Q 024011 71 SVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VL--PVPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLV 145 (274)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~--~~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI 145 (274)
.+|++++.|++||+|+++ ++|+||..++... ++ ++|++++++ ++++++++.+|+|+++.+..++++|+++||
T Consensus 88 ~vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV 164 (348)
T PLN03154 88 VVDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV 164 (348)
T ss_pred EEecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999999999876 6799999998753 54 458999986 677899999999999988888999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhHHH
Q 024011 146 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQR 223 (274)
Q Consensus 146 ~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~ 223 (274)
+|++|++|++++|+|+..|++|+++++++++++.++ ++|++.+++++. .++.+.+.+.++ .++|++||++|+..+..
T Consensus 165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d~vG~~~~~~ 243 (348)
T PLN03154 165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFDNVGGDMLDA 243 (348)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEECCCHHHHHH
Confidence 999999999999999999999999999999999887 799999998865 367777776665 57999999999888899
Q ss_pred hhhccccCCEEEEEecCCCCcc-----ccchhhHhhcceEEEEeecc
Q 024011 224 NLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 224 ~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~g~~~~ 265 (274)
++++++++|+++.+|...+... .++...++.+++++.|++..
T Consensus 244 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~ 290 (348)
T PLN03154 244 ALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQS 290 (348)
T ss_pred HHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHH
Confidence 9999999999999997654321 13556678889999988743
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=252.95 Aligned_cols=240 Identities=35% Similarity=0.510 Sum_probs=218.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++.+++++.+..+++++.+.|.|+++||+||+.++|+|++|++...+.++.. .+|.++|||++|+|+.+|++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCCCC
Confidence 899999999888889999999999999999999999999999999887766532 3477899999999999999999999
Q ss_pred CCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
+||+|+... ..|+|++|+.++.+.++++|+++++++++.++.+..++|+++.+...+++|++++|+|+.+.+|++++++
T Consensus 81 ~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~l 160 (327)
T PRK10754 81 VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW 160 (327)
T ss_pred CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 999998653 3588999999999999999999999999988899999999987778899999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++++.+++++++.+.++++|.+.+++.+..++.+.+.+.+.++++|+++|+.|+......++.++++|+++.+|.
T Consensus 161 ak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~ 240 (327)
T PRK10754 161 AKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGN 240 (327)
T ss_pred HHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEcc
Confidence 99999999999999999999999999888888777888888888887889999999998778889999999999999987
Q ss_pred CC
Q 024011 240 QG 241 (274)
Q Consensus 240 ~~ 241 (274)
..
T Consensus 241 ~~ 242 (327)
T PRK10754 241 AS 242 (327)
T ss_pred CC
Confidence 65
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=251.57 Aligned_cols=242 Identities=21% Similarity=0.311 Sum_probs=200.6
Q ss_pred CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEec
Q 024011 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (274)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (274)
.++.+++++.+.|+|++|||+|||.++++|+.|.. |.++.. ..|.++|.|++|+|+++|+ .|++||+|+++
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-- 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-- 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence 45679999999999999999999999999997653 332221 2367999999999999774 69999999986
Q ss_pred CCeeeeEEeeeCCCeEEC----CCCCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 91 GGGYAEKVAVPAGQVLPV----PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
++|++|+.++.+.+.++ |++++++++ +++++++.|+|+++.+..++++|+++||+|++|++|.+++|+++..|+
T Consensus 86 -~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~ 164 (325)
T TIGR02825 86 -PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC 164 (325)
T ss_pred -cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence 46999999999888777 899999987 678999999999988888999999999999999999999999999999
Q ss_pred eEEEEecChhhHHHHHHcCCCEEEeCCCC-cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCC-
Q 024011 166 RVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA- 243 (274)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~- 243 (274)
+|+++++++++.+.++++|++.+++++.. .+.+.+.... ++++|++||+.|+..+..++++++++|+++.+|.....
T Consensus 165 ~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~ 243 (325)
T TIGR02825 165 KVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYN 243 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcc
Confidence 99999999999999999999999987764 4544444444 45799999999988889999999999999999865421
Q ss_pred ---ccc--cchhhHhhcceEEEEee
Q 024011 244 ---KTE--LNITSLFAKRLTVQGIV 263 (274)
Q Consensus 244 ---~~~--~~~~~~~~~~~~i~g~~ 263 (274)
... .....+..+++++.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~ 268 (325)
T TIGR02825 244 RTGPLPPGPPPEIVIYQELRMEGFI 268 (325)
T ss_pred cCCCCCCCcchHHHhhhcceEeEEE
Confidence 111 12334566778887765
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=255.84 Aligned_cols=257 Identities=29% Similarity=0.441 Sum_probs=219.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++ .+++++.+.|.| +++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 76 (386)
T cd08283 1 MKALVWHGKG---DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEVGPEVRNL 76 (386)
T ss_pred CeeEEEecCC---CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEeCCCCCCC
Confidence 9999998653 488999999988 5999999999999999999999887754 3457899999999999999999999
Q ss_pred CCCCEEEEEe-----------------------------------------------cCCeeeeEEeeeCC--CeEECCC
Q 024011 80 KVGDQVCALL-----------------------------------------------GGGGYAEKVAVPAG--QVLPVPS 110 (274)
Q Consensus 80 ~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~--~~~~~p~ 110 (274)
++||+|++.. .+|+|++|++++.+ .++++|+
T Consensus 77 ~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 77 KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 9999998742 15889999999987 8999999
Q ss_pred CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEE
Q 024011 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (274)
++++++++.++...+++|+++ +...+++|++++|+|+ |.+|.+++++++..|+ +++++++++++.+.+++++...++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 999999999999999999998 7788999999999975 9999999999999998 599999999999999988545666
Q ss_pred eCCCC-cHHHHHHHHhCCCCccEEEECCChh----------------------hHHHhhhccccCCEEEEEecCCCCccc
Q 024011 190 NYKTE-DFVARVKEETGGKGVDVILDCMGAS----------------------YFQRNLGSLNIDGRLFIIGTQGGAKTE 246 (274)
Q Consensus 190 ~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~----------------------~~~~~~~~l~~~g~~v~~g~~~~~~~~ 246 (274)
+.... ++.+.+.+.+.++++|++||+.|+. .+..++++++++|+++.+|........
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 66655 4777787777777899999999742 467788999999999999876543344
Q ss_pred cchhhHhhcceEEEEee
Q 024011 247 LNITSLFAKRLTVQGIV 263 (274)
Q Consensus 247 ~~~~~~~~~~~~i~g~~ 263 (274)
++...++.+++++.+..
T Consensus 315 ~~~~~~~~~~~~i~~~~ 331 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQ 331 (386)
T ss_pred cCHHHHHhCCcEEEecc
Confidence 55555677788887764
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=252.41 Aligned_cols=257 Identities=23% Similarity=0.366 Sum_probs=217.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++ +++++.+.|.+.++||+||+.++++|++|++.+.+.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~ 76 (351)
T cd08285 1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFK 76 (351)
T ss_pred CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccC
Confidence 99999998774 788899999899999999999999999999988776543 24578999999999999999999999
Q ss_pred CCCEEEEEe------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHHH
Q 024011 81 VGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVW 128 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~ 128 (274)
+||+|++.. .+|+|++|+.++.. .++++|+++++++++.++.++.+++
T Consensus 77 ~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~ 156 (351)
T cd08285 77 PGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156 (351)
T ss_pred CCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence 999998742 25899999999974 8999999999999999999999999
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCC
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
+++ ....+++|+++||+|+ |++|++++|+++..|+ .++++++++++.+.++++|.+.+++.+..++.+++.+...++
T Consensus 157 ~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~ 234 (351)
T cd08285 157 HGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGK 234 (351)
T ss_pred HHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCC
Confidence 986 6678999999999975 9999999999999999 588888888899999999999999888778888888877777
Q ss_pred CccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCC-ccccchhh--HhhcceEEEEee
Q 024011 208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQGIV 263 (274)
Q Consensus 208 ~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~g~~ 263 (274)
++|+++|+.|+ ..+..+++.++++|+++.+|..... ...++... ...+..++.+.+
T Consensus 235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 294 (351)
T cd08285 235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGL 294 (351)
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEee
Confidence 89999999996 4578899999999999999876542 22333212 223455565543
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=252.44 Aligned_cols=253 Identities=26% Similarity=0.406 Sum_probs=215.6
Q ss_pred EEEEEcCC---CCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 2 ~a~~~~~~---~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++..+ ++++.++..+.|.|+|+++||+|||.++++|++|...+.+..+. ...|.++|+|++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVTL 79 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCCC
Confidence 67888887 77778999999999999999999999999999999988775442 235778999999999999999999
Q ss_pred CCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEecCCc
Q 024011 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSS 150 (274)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----g~~vlI~Ga~g 150 (274)
|++||+|+++. .+|+|++|+.++.+.++++|+++++++++.++.+.+++|+++....++++ |+++||+|+++
T Consensus 80 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g 159 (336)
T TIGR02817 80 FKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAG 159 (336)
T ss_pred CCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCc
Confidence 99999999874 25899999999999999999999999999999999999999877788877 99999999999
Q ss_pred hHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC-hhhHHHhhhcc
Q 024011 151 GIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSL 228 (274)
Q Consensus 151 ~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l 228 (274)
++|++++|+++.. |++|+++++++++.+.++++|++.+++.+. ++.+.+.+ ..++++|+++|+.+ .......++++
T Consensus 160 ~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~-~~~~~vd~vl~~~~~~~~~~~~~~~l 237 (336)
T TIGR02817 160 GVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEK-LGLEAVSYVFSLTHTDQHFKEIVELL 237 (336)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHh
Confidence 9999999999998 999999999999999999999999887554 56666665 44457999999875 46678899999
Q ss_pred ccCCEEEEEecCCCCccccchhhHhhcceEEEE
Q 024011 229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261 (274)
Q Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 261 (274)
+++|+++.++.. ..++...+..+++++.+
T Consensus 238 ~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~ 266 (336)
T TIGR02817 238 APQGRFALIDDP----AELDISPFKRKSISLHW 266 (336)
T ss_pred ccCCEEEEEccc----ccccchhhhhcceEEEE
Confidence 999999987532 23444445555565554
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=254.07 Aligned_cols=257 Identities=28% Similarity=0.367 Sum_probs=215.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++...+++ +++++.|.|++.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|+++..++
T Consensus 8 ~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 8 CKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEEEeCCCCccCC
Confidence 788888876654 88999999999999999999999999999999988763 24578999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|+.+. ..|+|+||++++.+.++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999998751 24789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++.+.+++.++|+++....++++|++++|+|+ |++|++++++++..|+ +|+++++++++++.++++|++.+++.
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 999999999999999998877888999999999975 9999999999999999 89999999999999999999888876
Q ss_pred CCCc--HHHHHHHHhCCCCccEEEECCCh-hhHHHhhhcc-ccCCEEEEEecCCCC-ccccchhhHhhcceEEEEeec
Q 024011 192 KTED--FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSL-NIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 192 ~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l-~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~ 264 (274)
...+ +.+.+.+.++ +++|+++|++|. ..+..++..+ ..+|+++.+|..... ...++.. .+.++.++.+++.
T Consensus 243 ~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~ 318 (373)
T cd08299 243 QDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVF 318 (373)
T ss_pred cccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEe
Confidence 5433 5666666665 579999999996 4456656654 578999999976432 2333333 2345678887764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=253.28 Aligned_cols=258 Identities=34% Similarity=0.548 Sum_probs=225.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC--
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR-- 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~-- 78 (274)
|||+++..++.+ +++++.+.|.+.++||+||+.++++|++|+....+.++. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCC
Confidence 999999988643 788899999999999999999999999999988876643 45778999999999999999988
Q ss_pred -CCCCCEEEEE-------------------------------------------------ecCCeeeeEEeeeCCCeEEC
Q 024011 79 -WKVGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPV 108 (274)
Q Consensus 79 -~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~ 108 (274)
|++||+|++. ..+|+|++|+.++...++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999872 13589999999999999999
Q ss_pred CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCE
Q 024011 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADV 187 (274)
Q Consensus 109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~ 187 (274)
|+++++.+++.++.+++++|+++.+...++++++++|+| +|++|++++++|+..|++ +++++.++++.+.+++++.+.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCce
Confidence 999999999999999999999998878889999999996 599999999999999998 888888888888888999999
Q ss_pred EEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEEee
Q 024011 188 CINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++.+..++.+.+.+..++.++|+++|+.++. ....++++++++|+++.++..... ...++...++.+++++.++.
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY 313 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence 99888778888888877777899999999987 788899999999999999865432 23456666667888887754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=246.11 Aligned_cols=261 Identities=38% Similarity=0.575 Sum_probs=224.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++.++.+ +..+++++.+.|.+.++||+||+.++++|++|.+...+.+.. ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCC
Confidence 8999998743 345999999999999999999999999999999988876532 23467899999999999999999999
Q ss_pred CCCEEEEEec----------------------------CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++... +|+|++|+.++.+.++++|+++++++++ +..+..++|+++.
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~ 157 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVA 157 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHH
Confidence 9999988641 4899999999999999999999999887 7778889999988
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec--ChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG--SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
....++++++++|.| ++++|.+++++++..|++|+++.. ++++.+.++++|.+.+ +....++.+.+.+...++++|
T Consensus 158 ~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd 235 (306)
T cd08258 158 ERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD 235 (306)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCC
Confidence 888899999999977 599999999999999999887643 4456777888998877 777778888888877777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
+++|+.|. ......++.++++|+++.+|...+....+++..++.+++++.|++...
T Consensus 236 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 236 VVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc
Confidence 99999975 557788999999999999998764456778888889999999998754
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=247.95 Aligned_cols=258 Identities=32% Similarity=0.488 Sum_probs=221.5
Q ss_pred CEEEEEcCCCC--CcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++.+++. ...+++++.+.|.+.++||+||+.++++|++|++...|.++....+|.++|||++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 99999999887 6779999999999999999999999999999999888876543456889999999999999999999
Q ss_pred CCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHH
Q 024011 79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (274)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~ 158 (274)
+++||+|++.. .|+|++|+.++.+.++++|+. +.+++.++.++.++|+++.+...+++|++++|+|++|.+|.++++
T Consensus 82 ~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~ 158 (329)
T cd08250 82 FKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQ 158 (329)
T ss_pred CCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHH
Confidence 99999999874 589999999999999999997 346677889999999999877889999999999999999999999
Q ss_pred HHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEe
Q 024011 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 159 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g 238 (274)
+++..|++++++++++++.+.++++|.+.+++.+..++.+.+.+..+ +++|+++|+.|+......+++++++|+++.+|
T Consensus 159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g 237 (329)
T cd08250 159 LAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVDNLALKGRLIVIG 237 (329)
T ss_pred HHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHHHhccCCeEEEEe
Confidence 99999999999999999999999999888888777666666666554 67999999999888889999999999999998
Q ss_pred cCCCCc----------cccchhhHhhcceEEEEee
Q 024011 239 TQGGAK----------TELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 239 ~~~~~~----------~~~~~~~~~~~~~~i~g~~ 263 (274)
...... ..++ ...+.++.++.++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 271 (329)
T cd08250 238 FISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFF 271 (329)
T ss_pred cccCCcccCccccccccccc-HHHhhcCceEEEEE
Confidence 765321 1122 23455677777764
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=249.72 Aligned_cols=257 Identities=25% Similarity=0.431 Sum_probs=222.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++++++. +++++.+.|+| .++||+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 76 (345)
T cd08286 1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNF 76 (345)
T ss_pred CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCcccc
Confidence 89999987664 89999999986 89999999999999999999998876542 347789999999999999999999
Q ss_pred CCCCEEEEEe----------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHHHH
Q 024011 80 KVGDQVCALL----------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWS 129 (274)
Q Consensus 80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~ 129 (274)
++||+|+... .+|+|++|+.++.+ .++++|+++++.+++.+..+.+++|.
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 156 (345)
T cd08286 77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156 (345)
T ss_pred CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence 9999998742 13889999999987 89999999999999999999999998
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
++....++++|++++|.|+ |++|.+++|+++..| .+++++++++++.+.++++|++.+++.+..++...+.+.+.+.+
T Consensus 157 ~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~ 235 (345)
T cd08286 157 CGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG 235 (345)
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC
Confidence 7767788999999999886 999999999999999 79999888888888889999999888877777777887777778
Q ss_pred ccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|. ..+..+++.++++|+++.+|.... ...+++..++.+++++.+..
T Consensus 236 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08286 236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGL 290 (345)
T ss_pred CCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeec
Confidence 9999999985 457788899999999999986543 34566666677888887643
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=247.61 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=217.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||++++..+.+..+++++.|.|.++++||+||+.++++|++|++.+.|.++.....|.++|||++|+|+. .++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 6899999888778999999999999999999999999999999998887654334578899999999988 56678999
Q ss_pred CCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhh--cCCCCCC-EEEEecCCchH
Q 024011 82 GDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGE-SFLVHGGSSGI 152 (274)
Q Consensus 82 Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~g~-~vlI~Ga~g~i 152 (274)
||+|++.. .+|++++|+.+|.+.++++|+++++++++.++....+++.++... ..+.+|+ +++|+|++|.+
T Consensus 79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~v 158 (323)
T TIGR02823 79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGV 158 (323)
T ss_pred CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHH
Confidence 99999874 368999999999999999999999999999999999998876443 3378898 99999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCC
Q 024011 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232 (274)
Q Consensus 153 G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g 232 (274)
|.+++++|+..|++++++++++++.+.++++|.+.+++....+. .+.....+ ++|.++|+.|+..+...+++++++|
T Consensus 159 g~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G 235 (323)
T TIGR02823 159 GSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGHTLANVLAQLKYGG 235 (323)
T ss_pred HHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCC-CceEEEECccHHHHHHHHHHhCCCC
Confidence 99999999999999999988888889999999888877544332 33334333 4999999999888888999999999
Q ss_pred EEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 233 RLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 233 ~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+++.+|.........+...++.+++++.++..
T Consensus 236 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 236 AVAACGLAGGPDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred EEEEEcccCCCCccccHHHHhhcceEEEEEec
Confidence 99999977544344455666678888888653
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=250.98 Aligned_cols=257 Identities=29% Similarity=0.466 Sum_probs=217.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++.+++. +++.+.+.|.| .++||+||+.++++|++|.+.+.|.++. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~ 76 (347)
T cd05278 1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRL 76 (347)
T ss_pred CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCcccc
Confidence 89999997654 88899999999 9999999999999999999998887754 3457899999999999999999999
Q ss_pred CCCCEEEEE------------------------------ecCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHH
Q 024011 80 KVGDQVCAL------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV 127 (274)
Q Consensus 80 ~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a 127 (274)
++||+|++. ..+|+|++|++++.+ .++++|+++++++++.++.++.++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta 156 (347)
T cd05278 77 KPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG 156 (347)
T ss_pred CCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence 999999872 125899999999987 899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
|+++ ...++++|++++|.|+ |++|.+++|+++..|+ +++++++++++.+.+++++++.+++.+..++.+.+.+.+++
T Consensus 157 ~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~ 234 (347)
T cd05278 157 FHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGG 234 (347)
T ss_pred eehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCC
Confidence 9998 6678999999999875 9999999999999997 88888888888888899999998888777787888877776
Q ss_pred CCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 207 ~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++|+++|+.|. ..+...+++++++|+++.+|..............+.+++++.++.
T Consensus 235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
T cd05278 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL 292 (347)
T ss_pred CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec
Confidence 789999999987 568889999999999999986543321111222335666666543
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=247.56 Aligned_cols=260 Identities=32% Similarity=0.456 Sum_probs=225.9
Q ss_pred EcCCCCCc--ceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 024011 6 ITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (274)
Q Consensus 6 ~~~~~~~~--~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (274)
++..+.+. .+++++.+.|.+.++||+||+.++++|+.|...+.+.++.....|.++|||++|+|+++|++++.+++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 82 (323)
T cd05282 3 YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQ 82 (323)
T ss_pred eCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCC
Confidence 45555554 6888899999999999999999999999999988776654334577899999999999999999999999
Q ss_pred EEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHc
Q 024011 84 QVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ 163 (274)
Q Consensus 84 ~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~ 163 (274)
+|+++..+|+|++|+.++.+.++++|+++++.+++.++....++|+++.....+++|++++|+|+++.+|++++++|+.+
T Consensus 83 ~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~ 162 (323)
T cd05282 83 RVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL 162 (323)
T ss_pred EEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHC
Confidence 99998646899999999999999999999999999898999999999888888899999999999999999999999999
Q ss_pred CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCC
Q 024011 164 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA 243 (274)
Q Consensus 164 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~ 243 (274)
|++++++++++++.+.++++|.+.+++....++...+.+.+.+.++|+++|+.|+......+++++++|+++.+|.....
T Consensus 163 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~ 242 (323)
T cd05282 163 GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE 242 (323)
T ss_pred CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC
Confidence 99999999999999999999999888887767778888887777899999999987778889999999999999876544
Q ss_pred ccccchhhHhhcceEEEEeecc
Q 024011 244 KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 244 ~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
...++...+..++.++.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd05282 243 PVPFPRSVFIFKDITVRGFWLR 264 (323)
T ss_pred CCCCCHHHHhhcCceEEEEEeh
Confidence 3455666655578888876643
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=248.98 Aligned_cols=259 Identities=32% Similarity=0.546 Sum_probs=224.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++.+ +++++.+.|.+.++||+||+.++++|++|+....|..+. ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCC
Confidence 999999987765 888999999999999999999999999999998887553 34577899999999999999999999
Q ss_pred CCCEEEE---------------------------EecCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+||+|++ +..+|+|++|+.++.. .++++|+++++++++.++.+.+++|+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 157 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence 9999986 3336899999999974 8999999999999999999999999998
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 210 (274)
.+..++.++++++|+| .+++|++++++++..|++|++++++.++.+.++++|.+.+++.+. .++...+.+...+ ++|
T Consensus 158 ~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~d 235 (345)
T cd08260 158 VHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-GAH 235 (345)
T ss_pred HHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-CCC
Confidence 7778899999999999 599999999999999999999999999999999999999988876 6777777777766 799
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCc--cccchhhHhhcceEEEEeec
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~g~~~ 264 (274)
.+|++.|. ......+++++++|+++.+|...... ..+++..++.+++++.++..
T Consensus 236 ~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 236 VSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred EEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 99999985 56788899999999999998765432 34556666677888887643
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=245.72 Aligned_cols=263 Identities=35% Similarity=0.579 Sum_probs=230.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++..+..+.+++++.+.|.++++|++||+.++++|++|++...|.++.....|.++|||++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 99999998765566888888888889999999999999999999998887654444678899999999999999999999
Q ss_pred CCCEEEEEe---------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC
Q 024011 81 VGDQVCALL---------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP 139 (274)
Q Consensus 81 ~Gd~V~~~~---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 139 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+..+..++|+++.+...+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 160 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP 160 (336)
T ss_pred CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence 999999864 15889999999999999999999999999999999999999878788999
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|++++|+| .+++|.+++++++..|++++++++++++.+.+++++.+.+++.+. .++.+.+.+..+++++|.++++.+.
T Consensus 161 g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 239 (336)
T cd08276 161 GDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGP 239 (336)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCCh
Confidence 99999996 589999999999999999999999999999998889888888766 6777788888777789999999998
Q ss_pred hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.....++++++++|+++.+|.........+...++.+++++.++..
T Consensus 240 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08276 240 GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAV 285 (336)
T ss_pred HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEec
Confidence 7788899999999999999976654334556667788888888764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=248.03 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=209.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++ .+++++.+.|+|+++||+||+.++++|++|++.+.|.++.. ..|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (339)
T PRK10083 1 MKSIVIEKPN---SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAAR 76 (339)
T ss_pred CeEEEEecCC---eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCC
Confidence 8999999765 49999999999999999999999999999999988876532 4588999999999999999999999
Q ss_pred CCCEEE---------------------------EEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVC---------------------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+ ++..+|+|++|+.++...++++|+++++++++ +..++.+++++. .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~ 154 (339)
T PRK10083 77 IGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-G 154 (339)
T ss_pred CCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-H
Confidence 999998 34346899999999999999999999998876 556777888544 6
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
..++++|++++|+| .|++|++++|+++. +|++ ++++++++++.+.++++|++.+++.+..++.+.+.. .+.++|+
T Consensus 155 ~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~~~d~ 231 (339)
T PRK10083 155 RTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE--KGIKPTL 231 (339)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCCCCCE
Confidence 67899999999999 59999999999996 5995 777888899999999999999988776666655532 1234679
Q ss_pred EEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 212 ILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 212 vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+||+.|. ..+...+++++++|+++.+|.... ...++...+..+++++.+..
T Consensus 232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 283 (339)
T PRK10083 232 IIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSR 283 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEe
Confidence 9999995 468889999999999999987653 22334444455677776654
|
|
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=248.80 Aligned_cols=260 Identities=32% Similarity=0.457 Sum_probs=221.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-----------CCCCCCCCCCceeEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-----------PKGASPYPGLECSGTI 69 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~V 69 (274)
|||+++..++.+ +++++.|.|+++++||+||+.++++|++|++.+.+.++. ....|.++|||++|+|
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 899999887755 889999999999999999999999999999998875432 1234678999999999
Q ss_pred EEecCCCCCCCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 70 LSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 70 ~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
+++|++++.+++||+|+++. ..|++++|+.++.+.++++|+++++.+++.+.+
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 99999999999999998762 358899999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 123 ~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
.+.+||+++.+....+++++++|+| .|++|.+++++++..|+ +|+++++++++.+.++++|.+.+++.+..++.+.+.
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRII 237 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHH
Confidence 9999999997777677899999997 59999999999999999 788988899999999999998888877777777777
Q ss_pred HHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+..++ ++|++||+.|. .....++++++++|+++.+|..... ...+...+..+++++.++...
T Consensus 238 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 300 (350)
T cd08240 238 KAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVG 300 (350)
T ss_pred HHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccC
Confidence 76665 79999999985 5688899999999999999876543 234444455677888776543
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=243.90 Aligned_cols=262 Identities=36% Similarity=0.605 Sum_probs=228.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++.++++..+++.+.+.|.+.+++|+|++.++++|++|+....|.++.....|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 89999998876667889999999999999999999999999999988776554445678899999999999999999999
Q ss_pred CCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+||+|+++. ..|++++|+.++.+.++++|+++++++++.++++..++|+++....++++|++++|+|+++++|.+
T Consensus 81 ~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~ 160 (325)
T cd08253 81 VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHA 160 (325)
T ss_pred CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHH
Confidence 999999885 368999999999999999999999999999999999999998887889999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|++|+++++++++.+.+++++.+.+++....++.+.+.+...++++|++++++|.......+++++++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v 240 (325)
T cd08253 161 AVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIV 240 (325)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEE
Confidence 99999999999999999999999998899988888777777777877776678999999999877788889999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEee
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.++... ....++...++.++.++.+..
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08253 241 VYGSGG-LRGTIPINPLMAKEASIRGVL 267 (325)
T ss_pred EEeecC-CcCCCChhHHHhcCceEEeee
Confidence 998754 223444444456666666554
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=248.52 Aligned_cols=257 Identities=28% Similarity=0.419 Sum_probs=222.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++++ +++++.+.|+++++||+|++.++++|++|+..+.|.++. ..|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccC
Confidence 999999988754 889999999999999999999999999999998886652 3467899999999999999999999
Q ss_pred CCCEEEEE-----------------------------------------------ecCCeeeeEEeeeCCCeEECCCCCC
Q 024011 81 VGDQVCAL-----------------------------------------------LGGGGYAEKVAVPAGQVLPVPSGVS 113 (274)
Q Consensus 81 ~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~ 113 (274)
+||+|++. ...|+|++|+.++.+.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99999883 1358999999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
+++++.++++..++|.++....+++++++++|+|+ |++|++++++++..|++ |+++++++++.+.++++|.+.+++.+
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999998878888999999999965 99999999999999996 99999999999888899998888887
Q ss_pred CCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEe
Q 024011 193 TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~ 262 (274)
..++..++.+...++++|+++|+.+. ......+++++++|+++.++.... ....++...+..++.++.++
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS 307 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence 77788888877766779999999984 567889999999999999987552 33455666666566666665
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=251.85 Aligned_cols=263 Identities=28% Similarity=0.468 Sum_probs=219.5
Q ss_pred CEEEEEcC--CCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC---------CCCCC-CCCCCceeE
Q 024011 1 MKAIVITQ--PGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGAS-PYPGLECSG 67 (274)
Q Consensus 1 m~a~~~~~--~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~e~~G 67 (274)
|||+++.. ++++ ..+++.+.+.|.|+++||+||+.++++|.+|.+...+.... ....| .++|||++|
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G 87 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASG 87 (398)
T ss_pred hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEE
Confidence 89999965 6655 56999999999999999999999999999998876553210 00113 379999999
Q ss_pred EEEEecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhcc
Q 024011 68 TILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119 (274)
Q Consensus 68 ~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~ 119 (274)
+|+++|++++.+++||+|++.+ .+|+|++|+.++.+.++++|+++++++++.
T Consensus 88 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~ 167 (398)
T TIGR01751 88 VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAAC 167 (398)
T ss_pred EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhh
Confidence 9999999999999999998864 258999999999999999999999999999
Q ss_pred CcchHHHHHHHHHh--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC---
Q 024011 120 FPEVACTVWSTVFM--TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE--- 194 (274)
Q Consensus 120 l~~~~~~a~~~l~~--~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--- 194 (274)
+..+..++|+++.. ..++++|++++|+|++|++|++++++++..|++++++++++++.+.++++|++.++|.+..
T Consensus 168 ~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 247 (398)
T TIGR01751 168 PGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHW 247 (398)
T ss_pred ccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchh
Confidence 99999999998754 4678899999999999999999999999999999999989999999999999988876432
Q ss_pred -------------------cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhc
Q 024011 195 -------------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 255 (274)
Q Consensus 195 -------------------~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 255 (274)
.+.+.+.+.+.++++|++|||.|...+...+++++++|+++.+|........++...++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR01751 248 GRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMR 327 (398)
T ss_pred hccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhc
Confidence 2344566666667899999999987788899999999999999987654345566666666
Q ss_pred ceEEEEee
Q 024011 256 RLTVQGIV 263 (274)
Q Consensus 256 ~~~i~g~~ 263 (274)
+.++.++.
T Consensus 328 ~~~~~~~~ 335 (398)
T TIGR01751 328 QKRIQGSH 335 (398)
T ss_pred ccEEEccc
Confidence 77776654
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=244.45 Aligned_cols=264 Identities=41% Similarity=0.652 Sum_probs=226.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++.+..+++++.+.|.+.+++|+||+.++++|.+|++.+.|..+....+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 89999987766667888888888889999999999999999999998886543334577899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++.. .+|++++|+.++.+.++++|+++++++++.++.+..++++++.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999998762 25789999999999999999999999999998899999999877
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
...++++++++|+|+++++|.+++++++..|++++++++++++.+.+...+.+..++....++.+.+.+...+.++|+++
T Consensus 161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEE
Confidence 88899999999999999999999999999999999999999998888888887777776667777777776666799999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+++|...+...+++++++|+++.++.........+....+.+++++.+...
T Consensus 241 ~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
T cd08266 241 EHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTM 291 (342)
T ss_pred ECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEec
Confidence 999988888899999999999999876654334455455667777776653
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=245.90 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=214.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--------CCCCCCCCCCceeEEEEEe
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--------PKGASPYPGLECSGTILSV 72 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~v 72 (274)
|||++++++++ +++++.+.|+++++||+||+.++++|++|++.+.|.... ....|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 99999987654 899999999999999999999999999999988775311 1135678999999999999
Q ss_pred cCCCC--CCCCCCEEEE---------------------------Ee--cCCeeeeEEeeeCC-CeEECCCCCCHHhhccC
Q 024011 73 GKNVS--RWKVGDQVCA---------------------------LL--GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 73 G~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l 120 (274)
|++++ .|++||+|++ +. .+|+|++|+.++.+ .++++|+++++++++.+
T Consensus 78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~ 157 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI 157 (350)
T ss_pred CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence 99998 8999999987 21 35899999999987 57899999999999987
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++.++|+++ +..++++|++++|.| .|++|.+++++++..|++ ++++++++++.+.++++|++.+++....++.++
T Consensus 158 -~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 234 (350)
T cd08256 158 -EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK 234 (350)
T ss_pred -hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHH
Confidence 8999999998 778899999999955 599999999999999985 667788888888889999998888877788888
Q ss_pred HHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhH-hhcceEEEEee
Q 024011 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQGIV 263 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 263 (274)
+.+.+++.++|+++|+.|. ..+...+++++++|+++.+|..... ..++...+ ..+++++.++.
T Consensus 235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~ 299 (350)
T cd08256 235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSH 299 (350)
T ss_pred HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEec
Confidence 8888877789999999995 4578889999999999999865432 23444333 24566776654
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=247.44 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=218.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||+++.+.+.+ +++++.+.|.+.++||+||+.++++|++|++.+.+.++. ..|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCC
Confidence 68888876654 889999999999999999999999999999998886542 35679999999999999999999999
Q ss_pred CCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCCC
Q 024011 82 GDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS 113 (274)
Q Consensus 82 Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 113 (274)
||+|++.. ..|+|++|+.++.+.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 99998752 136899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
+++++.+.+++.++|+++.+..++++|++++|+|+ |++|++++++++..|++ ++++++++++.+.++++|.+.+++..
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99999999999999998878888999999999975 99999999999999996 77777899999999999998888776
Q ss_pred CC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccc-cCCEEEEEecCC-CCccccchhhHhhcceEEEEeec
Q 024011 193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN-IDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~-~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.. ++.+.+.+.++ +++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .++.++.|++.
T Consensus 237 ~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~ 311 (365)
T cd05279 237 DQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVF 311 (365)
T ss_pred cccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEec
Confidence 65 66677777765 679999999985 56788899999 999999998753 23445666656 66777877643
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=241.15 Aligned_cols=249 Identities=29% Similarity=0.441 Sum_probs=211.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++.+ +..+++++.+.|.++++||+||+.++++|+.|.+...+. ..+.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~~ 74 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGPA 74 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCCC
Confidence 8999998865 667889999999999999999999999999999876521 2356899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|+.++.+.++++|+++++++++.+++...++|+++...... +|++++|+|+++++|.++++++
T Consensus 75 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a 153 (305)
T cd08270 75 VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLA 153 (305)
T ss_pred CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHH
Confidence 999999986679999999999999999999999999999999999999998666554 5999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++++.+++++++.+.++++|.+..++... +..+ +++|+++|+.|.......+++++.+|+++.+|..
T Consensus 154 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~ 224 (305)
T cd08270 154 ALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAPGGTVVSVGSS 224 (305)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcCCCEEEEEecc
Confidence 999999999999999999999999876543221 1112 4699999999988888999999999999999876
Q ss_pred CCCccccchhhHhh--cceEEEEeecc
Q 024011 241 GGAKTELNITSLFA--KRLTVQGIVPL 265 (274)
Q Consensus 241 ~~~~~~~~~~~~~~--~~~~i~g~~~~ 265 (274)
......++...+.. ++.++.++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 225 SGEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred CCCcccccHHHHhcccccceEEEEEcc
Confidence 53334455555544 57777776543
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=244.00 Aligned_cols=256 Identities=32% Similarity=0.486 Sum_probs=219.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++. +++++.+.|++.+++|+||+.++++|+.|+..+.+.++ ....|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~ 76 (343)
T cd08235 1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFK 76 (343)
T ss_pred CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCC
Confidence 89999998763 88899999989999999999999999999999887664 223467899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCC-----eEECCCCCCHHhhccCcchHHHHH
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQ-----VLPVPSGVSLKDAAAFPEVACTVW 128 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~l~~~~~~a~ 128 (274)
+||+|+++. .+|+|++|+.++... ++++|+++++.+++.+ ++..+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~ 155 (343)
T cd08235 77 VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCI 155 (343)
T ss_pred CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHH
Confidence 999999862 358999999999988 9999999999999765 7888999
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCC
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
+++.. .++++|++++|+| .|++|++++++++..|++ ++++++++++.+.+++++.+.+++.+..++.+.+.+...++
T Consensus 156 ~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 233 (343)
T cd08235 156 NAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGR 233 (343)
T ss_pred HHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCc
Confidence 99854 4899999999997 589999999999999999 88888899988888889998888888888888888877777
Q ss_pred CccEEEECCChh-hHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEEee
Q 024011 208 GVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 208 ~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~ 263 (274)
++|+++|+.+.. .....+++++++|+++.++..... ...++......+++++.++.
T Consensus 234 ~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (343)
T cd08235 234 GADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSY 291 (343)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEe
Confidence 899999999964 678889999999999999865432 23444555667777777654
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=245.05 Aligned_cols=254 Identities=27% Similarity=0.438 Sum_probs=214.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++++++. ..+++.|.|.+.++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccCC
Confidence 999999987764 227899999999999999999999999999988886543 2367899999999999999999999
Q ss_pred CCCEEEE-----------Ee-----------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA-----------LL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++ ++ .+|+|++|+.++.+.++++|+++++++++.++.+.+++|+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~- 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI- 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-
Confidence 9999986 21 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCcc
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 210 (274)
...++++|++++|+| .|++|.+++++++. .|++|+++++++++.+.++++|.+.+++.+. .++.+.+.+..+ ++|
T Consensus 156 ~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--~~d 232 (338)
T PRK09422 156 KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG--GAH 232 (338)
T ss_pred HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC--CCc
Confidence 677899999999999 59999999999998 5999999999999999999999988888754 556666766655 588
Q ss_pred -EEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 211 -VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 211 -~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++++.+...+..++++++.+|+++.+|.... ...++...+..++.++.+++
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 285 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSL 285 (338)
T ss_pred EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEec
Confidence 45555555668899999999999999987543 23456666666777877755
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=241.29 Aligned_cols=264 Identities=62% Similarity=0.993 Sum_probs=230.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++.++.++.+..+++++.+.+.+++++++||+.++++|++|.....+.++.+...|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 89999998777777888887777789999999999999999999988776654334578899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|+.++.+.++++|+++++.+++.+..+..++++++.+...++++++++|+|+++++|.++++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a 160 (325)
T TIGR02824 81 VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLA 160 (325)
T ss_pred CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHH
Confidence 99999998766899999999999999999999999999999999999998878889999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++++++.+++++.+.+++++.+.+++....++.+.+.+...++++|++++++|.......+++++++|+++.++..
T Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
T TIGR02824 161 KAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240 (325)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecC
Confidence 99999999999999988888888888877776666777777777666799999999987788899999999999999875
Q ss_pred CCCccccchhhHhhcceEEEEeec
Q 024011 241 GGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
......++...++.+++++.++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ 264 (325)
T TIGR02824 241 GGRKAELDLGPLLAKRLTITGSTL 264 (325)
T ss_pred CCCcCCCChHHHHhcCCEEEEEeh
Confidence 533235566666688888888764
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=242.98 Aligned_cols=253 Identities=34% Similarity=0.527 Sum_probs=216.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++ .+++.+.+.|.+.++||+|||.++++|+.|.....+.++.. ..|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (337)
T cd08261 1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLK 76 (337)
T ss_pred CeEEEEeCCC---ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCC
Confidence 8999998764 48899999999999999999999999999999988765433 3467899999999999999999999
Q ss_pred CCCEEEE---------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++ +...|+|++|+.++.+ ++++|+++++++++.+ .+..++++++ .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~ 153 (337)
T cd08261 77 VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-R 153 (337)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-H
Confidence 9999987 2236899999999999 9999999999999866 6778888887 7
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
..++++|+++||+|+ +.+|.+++++|+..|++|+++++++++.+.+++++.+++++....++.+.+.+..++.++|+++
T Consensus 154 ~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vl 232 (337)
T cd08261 154 RAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVI 232 (337)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEE
Confidence 788999999999974 8999999999999999999999999999999999999999888777888888887777899999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEe
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 262 (274)
|+.|+ .....+++.++++|+++.++.... ...++...+..+++++.+.
T Consensus 233 d~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~ 281 (337)
T cd08261 233 DATGNPASMEEAVELVAHGGRVVLVGLSKG-PVTFPDPEFHKKELTILGS 281 (337)
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-CCccCHHHHHhCCCEEEEe
Confidence 99976 457888999999999999986542 2344555566667776654
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=243.52 Aligned_cols=254 Identities=29% Similarity=0.444 Sum_probs=215.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++..++ .+++++.+.|+|. ++||+||+.++++|+.|++...|.++. ..|.++|+|++|+|+++|++++.+
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (344)
T cd08284 1 MKAVVFKGPG---DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTL 75 (344)
T ss_pred CeeEEEecCC---CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCcccc
Confidence 8999998764 4899999999985 999999999999999999988876652 346789999999999999999999
Q ss_pred CCCCEEEEEe-------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHH
Q 024011 80 KVGDQVCALL-------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 80 ~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
++||+|++.. .+|+|++|+.++.+ .++++|+++++++++.+++++++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~t 155 (344)
T cd08284 76 KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPT 155 (344)
T ss_pred CCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHH
Confidence 9999998753 14889999999965 99999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
+|+++.. ..+++|++++|+| .|++|++++++++..|+ +++++++++++.+.++++|+. .++.+..++...+.+.+.
T Consensus 156 a~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~ 232 (344)
T cd08284 156 GYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATE 232 (344)
T ss_pred HHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhC
Confidence 9999854 7888999999997 59999999999999997 899998888888888888875 456666677788888777
Q ss_pred CCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEe
Q 024011 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 262 (274)
++++|++||+.|. ......+++++++|+++.+|..............+.+++++.+.
T Consensus 233 ~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (344)
T cd08284 233 GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFG 290 (344)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEe
Confidence 7789999999986 46788899999999999999776443344555566777777644
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=242.72 Aligned_cols=260 Identities=33% Similarity=0.501 Sum_probs=224.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++..++++. +++++.+.|.++++||+|++.++++|+.|.....+.++.....|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 9999999988865 788888999999999999999999999999998887764445577899999999999999999999
Q ss_pred CCCEEEE------------------Ee---------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCA------------------LL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++ ++ .+|+|++|+.++.+.++++|+++++++++.+..++.++|+++..
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~ 159 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR 159 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 9999986 21 25899999999999999999999999999999999999999888
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
...+++++++||.| +|++|++++++++..|++|+++++++++.+.++++|.+.+++.......+.+ ....++++|+++
T Consensus 160 ~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~D~vi 237 (338)
T cd08254 160 AGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGGFDVIF 237 (338)
T ss_pred ccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCCceEEE
Confidence 88899999999986 4899999999999999999999999999999999998888877666666656 556667899999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+.|. ......+++++++|+++.++.... ...++...++.++.++.+++.
T Consensus 238 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 288 (338)
T cd08254 238 DFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFG 288 (338)
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEecc
Confidence 99985 467889999999999999986543 234566667777888877553
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=241.11 Aligned_cols=254 Identities=36% Similarity=0.519 Sum_probs=213.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..+++ .+.+++.|.|.+.++||+|++.++++|++|++...|.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccCC
Confidence 89999987433 4888999999999999999999999999999998886654 23577899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+++. ..|+|++|++++...++++|+++++++++.++.++.++|+++..
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~ 157 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR 157 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence 999999874 15899999999999999999999999999999999999999866
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
..++++++++|+|++|++|++++++++..|++++++++++++.+.+++++.+.+++.+. +.+.+.+.. ++|+++
T Consensus 158 -~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~d~v~ 231 (332)
T cd08259 158 -AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLG---GADVVI 231 (332)
T ss_pred -hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhcc---CCCEEE
Confidence 78899999999999999999999999999999999999988888888888877765443 444554432 599999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++|.......++.++++|+++.++........++......++.++.++.
T Consensus 232 ~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (332)
T cd08259 232 ELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSI 281 (332)
T ss_pred ECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEec
Confidence 99998888889999999999999987643322233333445666666653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=239.34 Aligned_cols=235 Identities=34% Similarity=0.572 Sum_probs=207.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++..+.+..+++++.+.|.+.++||+||+.++++|++|++...+.++. ...|.++|||++|+|+++|. ..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~ 77 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFT 77 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCC
Confidence 89999998876667888888888889999999999999999999988876542 23467899999999999995 5799
Q ss_pred CCCEEEEEec------CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Q 024011 81 VGDQVCALLG------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT 154 (274)
Q Consensus 81 ~Gd~V~~~~~------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~ 154 (274)
+||+|+++.. +|+|++|+.++...++++|+++++++++.+++++.++|+++.+...+++|++++|+|++|++|+
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~ 157 (320)
T cd08243 78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGL 157 (320)
T ss_pred CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHH
Confidence 9999998752 4899999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEE
Q 024011 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (274)
Q Consensus 155 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (274)
+++++++..|++|+++++++++.+.++++|.+.+++. ..++.+.+.+. ++++|+++|+.|+..+...+++++++|++
T Consensus 158 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~~~~l~~~g~~ 234 (320)
T cd08243 158 AALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRPGGIV 234 (320)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHHHHHhccCCEE
Confidence 9999999999999999999999999999998887754 44666667666 56799999999988888999999999999
Q ss_pred EEEecCC
Q 024011 235 FIIGTQG 241 (274)
Q Consensus 235 v~~g~~~ 241 (274)
+.+|...
T Consensus 235 v~~g~~~ 241 (320)
T cd08243 235 CMTGLLG 241 (320)
T ss_pred EEEccCC
Confidence 9998753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=246.67 Aligned_cols=237 Identities=33% Similarity=0.509 Sum_probs=209.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++ +..+++++.+.|+|+++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcCC
Confidence 9999999886 6669999999999999999999999999999998775554 112467899999999999999999999
Q ss_pred CCCEEEEEec--------CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC----------CCCCE
Q 024011 81 VGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----------SPGES 142 (274)
Q Consensus 81 ~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~----------~~g~~ 142 (274)
+||+|+++.. +|+|++|+.++.+.++++|+++++++++.++.++.++|+++.+..++ +++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (339)
T cd08249 78 VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKP 157 (339)
T ss_pred CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCE
Confidence 9999999864 48999999999999999999999999999999999999998665544 78999
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhH
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYF 221 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~ 221 (274)
++|+|+++.+|++++++++..|++++.++ ++++.+.++++|.+.+++....++.+.+.+..+ +++|+++|+.|. ..+
T Consensus 158 vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~vl~~~g~~~~~ 235 (339)
T cd08249 158 VLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYALDCISTPESA 235 (339)
T ss_pred EEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEEEEeeccchHH
Confidence 99999999999999999999999999888 568888889999999888887788888876665 679999999997 678
Q ss_pred HHhhhcccc--CCEEEEEecCCC
Q 024011 222 QRNLGSLNI--DGRLFIIGTQGG 242 (274)
Q Consensus 222 ~~~~~~l~~--~g~~v~~g~~~~ 242 (274)
..+++++++ +|+++.++....
T Consensus 236 ~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 236 QLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred HHHHHHHhccCCCEEEEecCCCc
Confidence 899999999 999999986543
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=240.95 Aligned_cols=257 Identities=31% Similarity=0.413 Sum_probs=219.8
Q ss_pred CEEEEEcCCCCCc---ceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~---~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||+++++++++. .+++++.+.|++.++||+||+.++++|++|++.+.+..+. ...|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 8999999988765 4788888998999999999999999999999988776542 23466899999999999999999
Q ss_pred CCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEecCC
Q 024011 78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGS 149 (274)
Q Consensus 78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----g~~vlI~Ga~ 149 (274)
.|++||+|+... .+|+|++|+.++.+.++++|+++++++++.++....++|+++.+...+++ |++++|+|+.
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~ 159 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA 159 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence 999999999864 46899999999999999999999999999999999999999877778877 9999999988
Q ss_pred chHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhc
Q 024011 150 SGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGS 227 (274)
Q Consensus 150 g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~ 227 (274)
|++|++++++++..| ++|+++++++++.+.++++|.+.+++... ++.+.+.. ..++++|+++|+.|. .....++++
T Consensus 160 g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~-~~~~~~d~vl~~~~~~~~~~~~~~~ 237 (336)
T cd08252 160 GGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEA-LGIEPVDYIFCLTDTDQHWDAMAEL 237 (336)
T ss_pred chHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHh-hCCCCCCEEEEccCcHHHHHHHHHH
Confidence 999999999999999 99999999999999999999988887664 55566653 344579999999985 568889999
Q ss_pred cccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++++|+++.+|... ..++...++.+++++.+..
T Consensus 238 l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~ 270 (336)
T cd08252 238 IAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEF 270 (336)
T ss_pred hcCCCEEEEecCCC---CcccchhhhcccceEEEEE
Confidence 99999999998652 2445555556777777654
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=240.69 Aligned_cols=255 Identities=34% Similarity=0.505 Sum_probs=216.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++.+ .+++++.+.|+++++||+||+.++++|+.|+....+.++. ..|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~a~~~~~~~---~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~~ 75 (343)
T cd08236 1 MKALVLTGPG---DLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDLA 75 (343)
T ss_pred CeeEEEecCC---ceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcCC
Confidence 8999999875 3889999999999999999999999999999988776522 3467899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+++. .+|+|++|+.+|.+.++++|+++++++++.+ ++..++|+++.
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~- 153 (343)
T cd08236 76 VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR- 153 (343)
T ss_pred CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-
Confidence 999999862 3589999999999999999999999999877 67889999985
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
...++++++++|+|+ +.+|.+++++++..|++ ++++++++++.+.+++++.+.+++.+... .+++.+..+++++|++
T Consensus 154 ~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~d~v 231 (343)
T cd08236 154 LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGADLV 231 (343)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCCCEE
Confidence 678899999999974 89999999999999997 99999898888888889988888877666 7777777777789999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCc--cccchhhHhhcceEEEEeec
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+.|. .....++++++++|+++.+|...... ...++..++.++.++.++..
T Consensus 232 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (343)
T cd08236 232 IEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWN 286 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEee
Confidence 999975 45788899999999999998664321 12234445677888887764
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=241.56 Aligned_cols=253 Identities=33% Similarity=0.498 Sum_probs=213.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|++.++|++||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccCC
Confidence 899999988764 889999999999999999999999999999988876543 23467899999999999999998899
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+.++..++|+++..
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~ 157 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRR 157 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHh
Confidence 999999863 15899999999999999999999999999999999999999866
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
. .++++++++|+|++|.+|++++++++..|++++++++++++.+.++++ ++.+++.+ ++.+.+.+. + ++|+++
T Consensus 158 ~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~-~--~~d~~l 230 (334)
T PRK13771 158 A-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI-G--GADIVI 230 (334)
T ss_pred c-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc-C--CCcEEE
Confidence 5 889999999999999999999999999999999999999998888877 65555544 444555543 2 599999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCcc-ccchhhHhhcceEEEEee
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~ 263 (274)
|+.|+......++.++++|+++.+|....... ......++.+++++.+..
T Consensus 231 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T PRK13771 231 ETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHI 281 (334)
T ss_pred EcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEec
Confidence 99998878899999999999999997643221 233444456778887764
|
|
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=237.12 Aligned_cols=257 Identities=34% Similarity=0.574 Sum_probs=221.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++.++.+++++.+.|.+.+++|+|++.++++|++|.....+........|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 89999999887777888888888889999999999999999999988776543333467899999999999999999999
Q ss_pred CCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+||+|+++. ..|+|++|+.++...++++|+++++.+++.++....++|+++.+..++++|++++|+|+.+++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~ 160 (326)
T cd08272 81 VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHV 160 (326)
T ss_pred CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHH
Confidence 999999885 268899999999999999999999999998999999999998788899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|+++++++++ ++.+.+++++.+.+++.... +.+.+.+.+.+.++|.++|+.|+......++++.++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v 238 (326)
T cd08272 161 AVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVV 238 (326)
T ss_pred HHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEE
Confidence 999999999999999988 88888888998888877666 7777877777778999999999877888899999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEee
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.++... ..++.....+++++.+..
T Consensus 239 ~~~~~~----~~~~~~~~~~~~~~~~~~ 262 (326)
T cd08272 239 SILGGA----THDLAPLSFRNATYSGVF 262 (326)
T ss_pred EEecCC----ccchhhHhhhcceEEEEE
Confidence 998653 122222335666666655
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=239.77 Aligned_cols=251 Identities=33% Similarity=0.558 Sum_probs=210.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++.++ .+.+++++.+.|+++++||+||+.++++|++|+....+ ... ...|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKV-KPMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCC-CCCCeecccceeEEEEEECCCCCCCC
Confidence 8999998776 55688888888889999999999999999999988764 221 12466899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+++. .+|+|++|+.++.+.++++|+++++++++.++.+..++|+++..
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~ 157 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT 157 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence 999998651 35899999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.++++|++++|+|++|.+|++++++|+..|+++++++++ +.++++|.+.+++.+. ..+.+.+.+ +++|+++
T Consensus 158 -~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~~----~~~~~~g~~~~~~~~~--~~~~l~~~~--~~~d~vl 228 (325)
T cd08264 158 -AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLKEFGADEVVDYDE--VEEKVKEIT--KMADVVI 228 (325)
T ss_pred -cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeHH----HHHHHhCCCeeecchH--HHHHHHHHh--CCCCEEE
Confidence 889999999999999999999999999999999888743 5667788888776543 244555555 5699999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.|...+..++++++++|+++.+|........+++..+..++.++.++.
T Consensus 229 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (325)
T cd08264 229 NSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGST 278 (325)
T ss_pred ECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEcc
Confidence 99998778899999999999999987533334666677777778887764
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=236.06 Aligned_cols=263 Identities=37% Similarity=0.548 Sum_probs=226.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++..+.++.+++++.+.|.+++++++|++.++++|+.|.....+.+.....+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 89999998777777888888888889999999999999999999887776544334477899999999999999999999
Q ss_pred CCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+||+|+++. .+|.+++|+.++.+.++++|+++++++++.+..+..++|.++.....+.++++++|+|+++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~ 160 (328)
T cd08268 81 VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLA 160 (328)
T ss_pred CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHH
Confidence 999999874 248899999999999999999999999999999999999998778888999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|++++++++++++.+.+++++.+.+++.+..++.+.+.+...+.++|+++++.|+......+++++++|+++
T Consensus 161 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v 240 (328)
T cd08268 161 AIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV 240 (328)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEE
Confidence 99999999999999999999888888888888887777677777777776667999999999877888899999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEee
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.+|........++....+.+++++.+..
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (328)
T cd08268 241 VYGALSGEPTPFPLKAALKKSLTFRGYS 268 (328)
T ss_pred EEEeCCCCCCCCchHHHhhcCCEEEEEe
Confidence 9986543323344443567777777654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=240.13 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=215.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|+++.+.+++ .+++++.+.|+|+++||+||+.++++|++|.+.+.|.+.. ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~ 77 (337)
T cd05283 1 KGYAARDASG--KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKV 77 (337)
T ss_pred CceEEecCCC--CceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCC
Confidence 5778887764 5999999999999999999999999999999998887643 345889999999999999999999999
Q ss_pred CCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 82 GDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
||+|+.. ..+|+|++|+.++.+.++++|+++++++++.+.+...+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 157 (337)
T cd05283 78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT 157 (337)
T ss_pred CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence 9999731 23589999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+|+++... .+++|++++|.| .|++|++++++++..|++++++++++++.+.+++++++.+++....++... . .
T Consensus 158 a~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~----~-~ 230 (337)
T cd05283 158 VYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKK----A-A 230 (337)
T ss_pred HHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhh----c-c
Confidence 99988554 589999999987 599999999999999999999999999999999999988887655433221 1 3
Q ss_pred CCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|++||+.|... ....+++++++|+++.+|..... ..+++..++.+++++.++...
T Consensus 231 ~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 289 (337)
T cd05283 231 GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIG 289 (337)
T ss_pred CCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEeccc
Confidence 56999999999864 78889999999999999976543 256666677789999987654
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=239.19 Aligned_cols=256 Identities=30% Similarity=0.398 Sum_probs=212.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC-C-CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++++++ .+++.+.|.|.|+++||+||+.++++|++|++.+.+.. . ....+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKLKAEP--GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEecCCC--ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 89999988774 49999999999999999999999999999999776532 1 11235678999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+ .++.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~ 157 (341)
T PRK05396 79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA 157 (341)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence 99999998751 3689999999999999999999999888744 5556665554
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.. ...+|++++|.|+ |++|.+++++++..|+ +++++++++++.+.++++|++.+++.+..++.+.+.+...++++|
T Consensus 158 ~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (341)
T PRK05396 158 LS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFD 234 (341)
T ss_pred Hc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCC
Confidence 32 3468999999875 9999999999999999 688888888888888999999998888777888887777777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++||+.|. ......+++++++|+++.+|..... ..++...+..+++++.++.
T Consensus 235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~ 287 (341)
T PRK05396 235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIY 287 (341)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-CcccHHHHhhcceEEEEEE
Confidence 99999886 4578889999999999999875432 3444566777788887765
|
|
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=240.75 Aligned_cols=254 Identities=27% Similarity=0.419 Sum_probs=211.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++.+++ .+++++.|.|.+ .++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.+
T Consensus 1 m~~~~~~~~~---~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~ 75 (375)
T cd08282 1 MKAVVYGGPG---NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESL 75 (375)
T ss_pred CceEEEecCC---ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcC
Confidence 8999998765 499999999986 7999999999999999999999887652 357899999999999999999999
Q ss_pred CCCCEEEEE-------e------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHH---hh
Q 024011 80 KVGDQVCAL-------L------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLK---DA 117 (274)
Q Consensus 80 ~~Gd~V~~~-------~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~a 117 (274)
++||+|+.. + .+|+|++|+.+|.+ .++++|++++++ ++
T Consensus 76 ~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~ 155 (375)
T cd08282 76 KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY 155 (375)
T ss_pred CCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence 999999862 1 13889999999976 899999999998 56
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (274)
+.+..+..++|+++ ...++++|++++|.|+ |++|++++++++..|+ +++++++++++.+.++++|+. .++.+..++
T Consensus 156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~ 232 (375)
T cd08282 156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGDP 232 (375)
T ss_pred eeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCcccH
Confidence 77888999999998 7788999999999875 9999999999999998 799988999999999999984 456666677
Q ss_pred HHHHHHHhCCCCccEEEECCChhh------------HHHhhhccccCCEEEEEecCCCC------------ccccchhhH
Q 024011 197 VARVKEETGGKGVDVILDCMGASY------------FQRNLGSLNIDGRLFIIGTQGGA------------KTELNITSL 252 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~~------------~~~~~~~l~~~g~~v~~g~~~~~------------~~~~~~~~~ 252 (274)
.+.+.+.++ +++|+++|+.|... +...+++++++|+++.+|..... ...+++..+
T Consensus 233 ~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (375)
T cd08282 233 VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLL 311 (375)
T ss_pred HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHH
Confidence 777777666 57999999998753 67889999999999988764321 123455556
Q ss_pred hhcceEEEEee
Q 024011 253 FAKRLTVQGIV 263 (274)
Q Consensus 253 ~~~~~~i~g~~ 263 (274)
..++..+.+..
T Consensus 312 ~~~~~~~~~~~ 322 (375)
T cd08282 312 WAKGLSFGTGQ 322 (375)
T ss_pred HhcCcEEEEec
Confidence 66666665543
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=236.00 Aligned_cols=258 Identities=23% Similarity=0.357 Sum_probs=213.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.++++++.+++++.|.|.|+++||+||+.++++|++|.....|.++....+|.++|||++|+|+. +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 99999999887767999999999999999999999999999999988776543333577889999999998 7777899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH--hhcCCC-CCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLS-PGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~-~g~~vlI~Ga~g~ 151 (274)
+||+|+++. .+|+|++|+.++.+.++++|+++++++++.++.++++++.++. +..... ++++++|+|++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~ 158 (324)
T cd08288 79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG 158 (324)
T ss_pred CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence 999999863 2589999999999999999999999999999999999887653 123444 5789999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|.+++++++..|+++++++.++++.+.++++|++.+++....+. .+.....+ ++|.++|+++.......+..++.+
T Consensus 159 vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~ 235 (324)
T cd08288 159 VGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHTLANVLAQTRYG 235 (324)
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999988887654322 33444333 489999999976677788888999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|.........+...++.+++++.++.
T Consensus 236 g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 236 GAVAACGLAGGADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred CEEEEEEecCCCCCCcchhhhhccccEEEEEE
Confidence 99999987643222345555557888888864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=238.06 Aligned_cols=255 Identities=29% Similarity=0.414 Sum_probs=207.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC----------CCCCCCCCCCCceeEEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------PPKGASPYPGLECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V~ 70 (274)
|||+++... .+++++.+.|+++++||+||+.++++|+.|++...|... .....|.++|+|++|+|+
T Consensus 1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 899999865 399999999999999999999999999999998877321 122347789999999999
Q ss_pred EecCCCCC-CCCCCEEEEEe-----------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 71 SVGKNVSR-WKVGDQVCALL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 71 ~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
++|++++. |++||+|+++. .+|+|++|+.++.+.++++|+++++++++ ++.++.++|+++
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~- 154 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV- 154 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-
Confidence 99999987 99999999872 36899999999999999999999999887 667888999885
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHH---HHHHHhCCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA---RVKEETGGKG 208 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~ 208 (274)
...++++|++++|+|+ +++|.+++|+++..|++ ++++++++++.+.+++++++.+++.+..+..+ .+.+...+++
T Consensus 155 ~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08262 155 RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK 233 (341)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC
Confidence 7788999999999985 99999999999999997 66666788888888999998888866543222 3444555667
Q ss_pred ccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|+ .....++++++++|+++.+|...... .........+++++.++.
T Consensus 234 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 288 (341)
T cd08262 234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSL 288 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEe
Confidence 9999999987 46788899999999999998764322 223223345667766544
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=233.36 Aligned_cols=259 Identities=37% Similarity=0.538 Sum_probs=223.2
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||+..+.++.+..+++.+.+.+.+.++||+|++.++++|++|++...+.++. .+|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKV 78 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCC
Confidence 5777777777667888888877789999999999999999999988776543 34668999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||+|+++...|+|++|+.++.+.++++|+++++++++.++....++++++.+..++++|++++|+|+++++|.+++++++
T Consensus 79 G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~ 158 (320)
T cd05286 79 GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAK 158 (320)
T ss_pred CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 99999884368899999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred HcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..|++++++++++++.+.++++|.+.+++....++.+.+.+.+.+.++|.++++.++......+++++++|+++.+|...
T Consensus 159 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 159 ALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCC
Confidence 99999999999999999999999988887777677777877777778999999999877888999999999999998755
Q ss_pred CCccccchhhHhhcceEEEEe
Q 024011 242 GAKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~g~ 262 (274)
.....++...+..+++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~ 259 (320)
T cd05286 239 GPVPPFDLLRLSKGSLFLTRP 259 (320)
T ss_pred CCCCccCHHHHHhcCcEEEEE
Confidence 432334444444667777644
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=236.30 Aligned_cols=253 Identities=33% Similarity=0.502 Sum_probs=212.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++ .+++++.+.|++.++||+||+.++++|+.|.....|.++.. +|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--~p~~~g~~~~G~v~~vG~~v~~~~ 75 (334)
T cd08234 1 MKALVYEGPG---ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--PPLVPGHEFAGVVVAVGSKVTGFK 75 (334)
T ss_pred CeeEEecCCC---ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC--CCcccccceEEEEEEeCCCCCCCC
Confidence 8999998776 48899999999999999999999999999999988876532 577899999999999999999999
Q ss_pred CCCEEEEE---------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++. ..+|+|++|+.++.+.++++|+++++.+++.+ .+..++++++ +
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~ 153 (334)
T cd08234 76 VGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-D 153 (334)
T ss_pred CCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 99999871 13589999999999999999999999998765 7788899888 7
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
..++++|++++|+|+ |.+|.+++++++..|++ ++++++++++.+.+++++.+.+++.+..++... +.+.+.++|++
T Consensus 154 ~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~vd~v 230 (334)
T cd08234 154 LLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYGFDVV 230 (334)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH--HHhcCCCCcEE
Confidence 788999999999975 99999999999999997 888899999999888899888887766665544 44555679999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+.|. ......+++++++|+++.+|.... ....++...++.+++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T cd08234 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSF 283 (334)
T ss_pred EECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEec
Confidence 999975 457788999999999999987643 223444444555677777654
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=236.37 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=210.3
Q ss_pred EEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCC-CCC-CCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPP-PKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|++++++. .+++++.+.|.+.++||+||+.++++|+.|++.+.+. ... ....|.++|+|++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~---~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (343)
T cd05285 1 AAVLHGPG---DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK 77 (343)
T ss_pred CceEecCC---ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence 35666664 3889999999999999999999999999999876432 111 112466889999999999999999999
Q ss_pred CCCEEEE------------------------Ee----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA------------------------LL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~------------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++ +. .+|+|++|+.++.+.++++|+++++++++.+ .++.++++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~- 155 (343)
T cd05285 78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC- 155 (343)
T ss_pred CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 9999986 21 2589999999999999999999999998866 6788898887
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcH---HHHHHHHhCCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEETGGKG 208 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~ 208 (274)
....+++|++++|.|+ |++|++++++++..|++ |+++++++++.+.+++++.+.+++.+..++ .+.+.+.+.+++
T Consensus 156 ~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T cd05285 156 RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG 234 (343)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC
Confidence 7789999999999875 89999999999999997 888888899988889999999888776654 677777777778
Q ss_pred ccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|.. .....+++++++|+++.+|..... ..+++.....+++++.++.
T Consensus 235 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 289 (343)
T cd05285 235 PDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVF 289 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEec
Confidence 99999999975 678899999999999999865432 3455555666777777654
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=235.18 Aligned_cols=255 Identities=30% Similarity=0.497 Sum_probs=212.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||+++++++++ +++++.|.|.| +++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|+++..+
T Consensus 1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (345)
T cd08287 1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSV 75 (345)
T ss_pred CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCcc
Confidence 89999987664 88999999986 8999999999999999999888876542 347789999999999999999999
Q ss_pred CCCCEEEE-Ee--------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhc-----cCcchHH
Q 024011 80 KVGDQVCA-LL--------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAA-----AFPEVAC 125 (274)
Q Consensus 80 ~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~l~~~~~ 125 (274)
++||+|++ .. .+|+|++|+.++.+ .++++|++++++.+. ++...+.
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 99999987 21 13889999999975 999999999883221 2235678
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
++++++ ....+++|++++|.| .|++|.+++++++..|++ ++++++++++.+.++++|++.+++....++.+.+.+..
T Consensus 156 ~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~ 233 (345)
T cd08287 156 TGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELT 233 (345)
T ss_pred HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhc
Confidence 888887 467889999999977 599999999999999996 77777787788888899999999888878888888877
Q ss_pred CCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.++|.++|+.|+ ..+..++++++++|+++.++.... ...++....+.+++++.+..
T Consensus 234 ~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 234 GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGP 292 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEec
Confidence 77789999999986 457889999999999999987653 33455545677888887754
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=237.85 Aligned_cols=247 Identities=28% Similarity=0.410 Sum_probs=205.5
Q ss_pred eEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC------CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEE-
Q 024011 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY------PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA- 87 (274)
Q Consensus 15 ~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~- 87 (274)
+++++.|.|+++++||+||+.++++|++|++.+.+.. +....+|.++|||++|+|+++|++++.|++||+|++
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 8999999999999999999999999999998876421 222345789999999999999999999999999985
Q ss_pred --------------------------EecCCeeeeEEeeeCCCeEECCCCC-------CHHhhccCcchHHHHHHHHHhh
Q 024011 88 --------------------------LLGGGGYAEKVAVPAGQVLPVPSGV-------SLKDAAAFPEVACTVWSTVFMT 134 (274)
Q Consensus 88 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~~-------~~~~aa~l~~~~~~a~~~l~~~ 134 (274)
+..+|+|++|+.++.+.++++|+.+ +++ +++++.+++++|+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 3336899999999999999999863 455 555778889999998655
Q ss_pred -cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCC---cHHHHHHHHhCCCCc
Q 024011 135 -SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGV 209 (274)
Q Consensus 135 -~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 209 (274)
.++++|++++|+|+ |++|++++++++..|+ +|+++++++++.+.++++|.+.+++.+.. ++.+.+.+.+.++++
T Consensus 198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gv 276 (384)
T cd08265 198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGA 276 (384)
T ss_pred cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCC
Confidence 68999999999975 9999999999999999 79999988888888899999888876643 677788888887889
Q ss_pred cEEEECCChh--hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 210 DVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 210 d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+++|+.|.. .+...++.++++|+++.+|.... ...++...+..+..++.++..
T Consensus 277 Dvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~ 332 (384)
T cd08265 277 DIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQG 332 (384)
T ss_pred CEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeec
Confidence 9999999863 57888999999999999986543 234455556666777777653
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=238.70 Aligned_cols=236 Identities=35% Similarity=0.539 Sum_probs=203.2
Q ss_pred CEEEEEcCCCCCc-ceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCC--------------CCCCCCCCCCc
Q 024011 1 MKAIVITQPGSPE-VLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--------------PKGASPYPGLE 64 (274)
Q Consensus 1 m~a~~~~~~~~~~-~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~--------------~~~~p~~~G~e 64 (274)
|||++++++++++ .+++++.+.|.| +++||+||+.++++|++|.+...|.... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 8999999888753 488899999999 5999999999999999999988774210 12347789999
Q ss_pred eeEEEEEecCCCCCCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC--
Q 024011 65 CSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-- 139 (274)
Q Consensus 65 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-- 139 (274)
++|+|+++|+++..+++||+|+++. .+|+|++|+.++.+.++++|+++++++++.++++..++|+++.+...+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 9999999999999999999999875 26899999999999999999999999999999999999999877777654
Q ss_pred --CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 140 --GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 140 --g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|++++|+|++|++|++++++++..|++|+++.++ ++.+.+++++.+.+++....++.+.+.. ..++|+++|+.|
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~---~~~vd~vi~~~g 236 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE---RGKFDVILDTVG 236 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh---cCCCCEEEECCC
Confidence 9999999999999999999999999999988865 5677778899888888766555555543 356999999999
Q ss_pred hhhHHHhhhccccCCEEEEEecC
Q 024011 218 ASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.......+++++++|+++.++..
T Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 237 GDTEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred hHHHHHHHHHhccCCEEEEecCC
Confidence 88888999999999999999754
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=229.33 Aligned_cols=263 Identities=42% Similarity=0.676 Sum_probs=224.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++..++....+++.+.+ |.+. +++++|++.++++|++|+....+.+......|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 899999977766668888877 7666 49999999999999999998877654323346688999999999999999999
Q ss_pred CCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
++||+|+++...|++++|+.++.+.++++|+++++.+++.+..+..+++.++.+...++++++++|+|+++++|.+++++
T Consensus 80 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~ 159 (323)
T cd08241 80 KVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQL 159 (323)
T ss_pred CCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 99999999864689999999999999999999999998888899999999987778899999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++|+.+++++++.+.+++++.+..++....++.+.+.+.+.+.++|.++++.|......++++++++|+++.++.
T Consensus 160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~ 239 (323)
T cd08241 160 AKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGF 239 (323)
T ss_pred HHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEcc
Confidence 99999999999999999999988898888877777777788877777789999999998778889999999999999987
Q ss_pred CCCCccccchhhHhhcceEEEEeec
Q 024011 240 QGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.......++....+.+++++.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 240 ASGEIPQIPANLLLLKNISVVGVYW 264 (323)
T ss_pred CCCCcCcCCHHHHhhcCcEEEEEec
Confidence 5433222334345667788777653
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=233.46 Aligned_cols=239 Identities=44% Similarity=0.633 Sum_probs=204.8
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCC---CCCCCCCCceeEE---EEEec-CCC
Q 024011 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK---GASPYPGLECSGT---ILSVG-KNV 76 (274)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~vG-~~~ 76 (274)
.+...++.......++.+.|.|.+++++|++.++++|+.|+.+..|.+.... .+|.+++.++.|. +...| ..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~ 88 (347)
T KOG1198|consen 9 SLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVV 88 (347)
T ss_pred EEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccc
Confidence 3444445555666788999999999999999999999999999999887655 6775555555554 44555 334
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhc------CCCCCCEEEEecCCc
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS------HLSPGESFLVHGGSS 150 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~~g~~vlI~Ga~g 150 (274)
..+..||++.....+|+|+||.++|...++++|++++++++++++.++.+||.++.... +.++|+++||+|++|
T Consensus 89 ~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsg 168 (347)
T KOG1198|consen 89 GGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSG 168 (347)
T ss_pred cceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCc
Confidence 56888888888888899999999999999999999999999999999999999999988 899999999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 151 ~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
++|.+++|+|+..++..++++++++..+.++++|++.++|+++.++.+.+.+.+ +.++|+|+||.|+........++..
T Consensus 169 gVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~~ 247 (347)
T KOG1198|consen 169 GVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLLK 247 (347)
T ss_pred HHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCccccchhhhcc
Confidence 999999999999997777778899999999999999999999999999999888 7789999999999877788888888
Q ss_pred CCEEEEEecCCCC
Q 024011 231 DGRLFIIGTQGGA 243 (274)
Q Consensus 231 ~g~~v~~g~~~~~ 243 (274)
+|+...++..++.
T Consensus 248 ~g~~~~i~~~~~~ 260 (347)
T KOG1198|consen 248 GGGGAYIGLVGDE 260 (347)
T ss_pred CCceEEEEecccc
Confidence 8876666555533
|
|
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=231.29 Aligned_cols=237 Identities=32% Similarity=0.542 Sum_probs=206.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
.||+++...+.+..+++++.+.|.|.++||+||+.++++|++|+....+.++....+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 38999999888888999999999999999999999999999999988876654334677899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++...|+|++|+.++.+.++++|+++++++++.++.+..++|+++.+...+++|++++|+|++|++|+++++++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a 160 (331)
T cd08273 81 VGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELA 160 (331)
T ss_pred CCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 99999998656899999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++|++++. +++.+.++++|+.. ++.+..++... +.. .+++|.++++.|+......+++++.+|+++.+|..
T Consensus 161 ~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~ 235 (331)
T cd08273 161 LLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--MLT-PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235 (331)
T ss_pred HHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hcc-CCCceEEEECCchHHHHHHHHHhcCCCEEEEEccC
Confidence 999999999987 77888888888654 44444444333 222 34799999999988788899999999999999876
Q ss_pred CC
Q 024011 241 GG 242 (274)
Q Consensus 241 ~~ 242 (274)
..
T Consensus 236 ~~ 237 (331)
T cd08273 236 SS 237 (331)
T ss_pred CC
Confidence 53
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=228.94 Aligned_cols=239 Identities=38% Similarity=0.620 Sum_probs=211.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.++++...+++++.+.|++.+++|+||+.++++|++|+....+..... ..|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~ 79 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWK 79 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCC
Confidence 999999988843359999999999999999999999999999998887755321 2366889999999999999999999
Q ss_pred CCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||+|+++. .+|+|++|+.++.+.++++|+++++.+++.+.++..++++++.+...+++|++++|+|+++++|++++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~ 159 (325)
T cd08271 80 VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAV 159 (325)
T ss_pred CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHH
Confidence 999999885 36889999999999999999999999999999999999999988888999999999999899999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (274)
++++..|++++++. ++++.+.+.++|.+.+++....++.+.+.+...++++|.++++.++......+++++++|+++.+
T Consensus 160 ~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~ 238 (325)
T cd08271 160 QLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCI 238 (325)
T ss_pred HHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEE
Confidence 99999999998887 66777888888988888877777777788777777899999999987777789999999999998
Q ss_pred ecCC
Q 024011 238 GTQG 241 (274)
Q Consensus 238 g~~~ 241 (274)
+...
T Consensus 239 ~~~~ 242 (325)
T cd08271 239 QGRP 242 (325)
T ss_pred cCCC
Confidence 7543
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=228.36 Aligned_cols=257 Identities=26% Similarity=0.387 Sum_probs=212.3
Q ss_pred EEEEEcCCC----CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCC
Q 024011 2 KAIVITQPG----SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKN 75 (274)
Q Consensus 2 ~a~~~~~~~----~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~ 75 (274)
|+|+++... .++.+++++.+.|++.++||+||+.++++|++|.....+... .+...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 678887655 457899999999999999999999999999988765554321 11123457899999999999964
Q ss_pred CCCCCCCCEEEEEecCCeeeeEEeeeC-CCeEECCCCCC--HHhhcc-CcchHHHHHHHHHhhcCCCCCCEEEEecCCch
Q 024011 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVS--LKDAAA-FPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151 (274)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~ 151 (274)
.+++||+|+++ ++|++|+.++. +.++++|++++ +.+++. ++++..++|+++.....+.++++++|+|++++
T Consensus 83 --~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ 157 (329)
T cd05288 83 --DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGA 157 (329)
T ss_pred --CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcch
Confidence 79999999887 47999999999 99999999985 445544 88999999999877788899999999999899
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
+|++++++++..|++++++++++++.+.+++ ++.+.+++.+..++.+.+.+..+ +++|+++|++|...+...++++++
T Consensus 158 ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~~~~~~~~l~~ 236 (329)
T cd05288 158 VGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEILDAALTLLNK 236 (329)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHHHHHHHHhcCC
Confidence 9999999999999999999999999998887 99988888877777777777664 679999999998888899999999
Q ss_pred CCEEEEEecCCCCccc-----cchhhHhhcceEEEEeec
Q 024011 231 DGRLFIIGTQGGAKTE-----LNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 231 ~g~~v~~g~~~~~~~~-----~~~~~~~~~~~~i~g~~~ 264 (274)
+|+++.+|........ ++...++.++.++.++..
T Consensus 237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (329)
T cd05288 237 GGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIV 275 (329)
T ss_pred CceEEEEeeccCcccccccccccHHHHhhCcceEEeecc
Confidence 9999999865543211 234556677888887653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=231.30 Aligned_cols=257 Identities=25% Similarity=0.373 Sum_probs=205.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|+++++..+. .+++++.+.|.|+++||+||+.++++|++|.+...+.... ....|.++|||++|+|+++|+++++
T Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 18 NMAAWLVGVN---TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cceEEEecCC---ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4455565543 3888888888899999999999999999999988763211 1124678999999999999999999
Q ss_pred CCCCCEEEEE------------------------e----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCAL------------------------L----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~------------------------~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|++||+|++. . .+|+|++|+.++.+.++++|+++++++++. ..++.+++++
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~ 173 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHA 173 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHH
Confidence 9999999862 1 158999999999999999999999998874 2455567877
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC--CCcHHHHHHHH--hC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEE--TG 205 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~ 205 (274)
+ ...++.+|++++|+|+ |++|.+++++++..|++ ++++++++++.+.++++|++..++.+ ..++.+.+.+. ..
T Consensus 174 ~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T PLN02702 174 C-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAM 251 (364)
T ss_pred H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhc
Confidence 7 6778899999999975 99999999999999995 67777888888888899998877643 34566665543 23
Q ss_pred CCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+.++|++||+.|. ..+...+++++++|+++.+|..... ..++...+..+++++.+++.
T Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEecc
Confidence 4469999999994 5688999999999999999865432 34556667788888888764
|
|
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=229.46 Aligned_cols=240 Identities=24% Similarity=0.369 Sum_probs=200.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++ .+++++.+.|+++++||+||+.++++|++|.+...|.++ .|.++|||++|+|+++|++ ++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~ 70 (319)
T cd08242 1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---EL 70 (319)
T ss_pred CeeEEEeCCC---cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CC
Confidence 8999998754 499999999999999999999999999999999888654 4678999999999999998 67
Q ss_pred CCCEEEE---------------------------E-ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA---------------------------L-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|.. + ..+|+|++|+.++.+.++++|++++.++++.+ .+..++|.++
T Consensus 71 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~- 148 (319)
T cd08242 71 VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL- 148 (319)
T ss_pred CCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 9999863 1 12589999999999999999999999888754 4555666555
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+..+++++++++|+| .|.+|++++|+++..|+++++++.++++.+.++++|++...+.+.. +.+.++|++
T Consensus 149 ~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~v 218 (319)
T cd08242 149 EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE---------SEGGGFDVV 218 (319)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---------ccCCCCCEE
Confidence 677899999999997 5999999999999999999999999999999999998877665321 344679999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+.|. ..+...+++++++|+++..+.... ...++...+..++.++.++.
T Consensus 219 id~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~ 269 (319)
T cd08242 219 VEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSR 269 (319)
T ss_pred EECCCChHHHHHHHHHhhcCCEEEEEcccCC-CCccCHHHheecceEEEEEe
Confidence 999987 457888899999999998765433 34556666777788888764
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=228.91 Aligned_cols=249 Identities=27% Similarity=0.398 Sum_probs=205.9
Q ss_pred CEEEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++.+++++ ..+++++.+.|.+.++||+||+.++++|++|++...|.++. ...|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 899999988742 34778888888899999999999999999999998886654 345789999999999999999999
Q ss_pred CCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
+++||+|+... .+|+|++|+.++.+.++++|+++++.+++.+.+++.++|++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 99999997621 25889999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+ +.++++++++++|+| .|++|++++++++..|++|+++++++++.+.++++|.+..++.+.. .++++|
T Consensus 160 ~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~vD 227 (329)
T cd08298 160 L-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL----------PPEPLD 227 (329)
T ss_pred H-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc----------CCCccc
Confidence 8 788999999999998 4899999999999999999999999999999999998777665432 234699
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.++++.+. ...+..++.++++|+++.+|........++... +.++..+.++.
T Consensus 228 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~ 280 (329)
T cd08298 228 AAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVA 280 (329)
T ss_pred EEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEec
Confidence 99998654 457889999999999998875432222233332 33455555544
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-32 Score=223.83 Aligned_cols=237 Identities=39% Similarity=0.641 Sum_probs=204.6
Q ss_pred eEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEe-------------------
Q 024011 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL------------------- 89 (274)
Q Consensus 29 ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~------------------- 89 (274)
||+|+|.++++|+.|+..+.+..+.....|.++|||++|+|+++|++++.|++||+|++..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 6899999999999999999887652334577899999999999999999999999999875
Q ss_pred ----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 90 ----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 90 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
..|+|++|+.++.+.++++|+++++++++.++.++.++|+++.....++++++++|+|+++ +|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 2689999999999999999999999999999999999999998777778999999999866 99999999999999
Q ss_pred eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCc
Q 024011 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK 244 (274)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (274)
+|+++++++++.+.+++++.+.+++....+..+.+. ...+.++|+++++++. ......++.++++|+++.++......
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 238 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP 238 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC
Confidence 999999999999999989988888777766666665 5556679999999998 67888999999999999998776543
Q ss_pred cccchhhHhhcceEEEEeecccc
Q 024011 245 TELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 245 ~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
........+.+++++.++.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~ 261 (271)
T cd05188 239 PLDDLRRLLFKELTIIGSTGGTR 261 (271)
T ss_pred CcccHHHHHhcceEEEEeecCCH
Confidence 33335567788999999886543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=227.47 Aligned_cols=253 Identities=30% Similarity=0.424 Sum_probs=210.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|++++.+++. .+++++.+.|.+.++||+|++.++++|++|++.+.+.++. ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCccccc
Confidence 6889988764 3899999999999999999999999999999998886643 235778999999999999999999999
Q ss_pred CCEEEE----------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 82 GDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 82 Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
||+|+. +..+|+|++|+.++.+.++++|+++++++++.+.+...++|+++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~ 157 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD 157 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence 999973 2235889999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.+++++++++|+|+ +++|++++++++..|++|+++++++++.+.+++++.+.+++....+.... .. +++|+++
T Consensus 158 -~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~-~~~d~vi 230 (330)
T cd08245 158 -AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA----AA-GGADVIL 230 (330)
T ss_pred -hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----cc-CCCCEEE
Confidence 78899999999976 77999999999999999999999999999998899888876654443322 22 4699999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.+. .....++++++++|+++.++.........+...++.++.++.++..
T Consensus 231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (330)
T cd08245 231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTH 282 (330)
T ss_pred ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEecc
Confidence 99774 5578889999999999999865443333334456667777766654
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=214.60 Aligned_cols=244 Identities=25% Similarity=0.355 Sum_probs=205.7
Q ss_pred cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCC--CCCCCCCCceeEEEEEe--cCCCCCCCCCCEEEEE
Q 024011 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSV--GKNVSRWKVGDQVCAL 88 (274)
Q Consensus 13 ~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~v--G~~~~~~~~Gd~V~~~ 88 (274)
+.|++++.+.|+|++||||||+.+.+++|. ++|.+...+ -.|.-+|-..+|.++.. -|+.+.|++||.|.+.
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~ 100 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV 100 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec
Confidence 569999999999999999999999999994 233332222 23566777776644432 2567889999999888
Q ss_pred ecCCeeeeEEeeeCCCeEECCCC---CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 89 LGGGGYAEKVAVPAGQVLPVPSG---VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~p~~---~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
. +|++|..++.+.+.++.+. +++.. ..|.++..|||.+|.+.+++++|++++|.+|+|++|..+.|+++..|+
T Consensus 101 ~---GWq~y~i~~~~~l~Kvd~~~~pl~~~L-gvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~ 176 (340)
T COG2130 101 S---GWQEYAISDGEGLRKLDPSPAPLSAYL-GVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC 176 (340)
T ss_pred c---cceEEEeechhhceecCCCCCCcchHH-hhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC
Confidence 4 6999999999999999854 33333 358899999999999999999999999999999999999999999999
Q ss_pred eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCc
Q 024011 166 RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK 244 (274)
Q Consensus 166 ~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (274)
+|+.+.-++++.+++++ +|.|..+|+..+++.+.+.+..+ .|+|+.|||+|+..++..+..|..++|+..||....+.
T Consensus 177 rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN 255 (340)
T COG2130 177 RVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYN 255 (340)
T ss_pred eEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcC
Confidence 99999999999999987 99999999999999999999887 58999999999999999999999999999999877543
Q ss_pred cc------cchhhHhhcceEEEEeecc
Q 024011 245 TE------LNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 245 ~~------~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ..+..++.+.+++.|+...
T Consensus 256 ~~~~~~gp~~l~~l~~kr~~v~Gfiv~ 282 (340)
T COG2130 256 APELPPGPRRLPLLMAKRLRVQGFIVA 282 (340)
T ss_pred CCCCCCCcchhhHHHhhhheeEEEEec
Confidence 22 2245577889999999974
|
|
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-31 Score=227.36 Aligned_cols=255 Identities=35% Similarity=0.450 Sum_probs=207.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC--CCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++..+. .+++.+.+.|.|+++|++||+.++++|+.|...+.+.. ......|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 89999998765 48899999999999999999999999999998765431 111234668999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+++||+|+++. ..|+|++|++++.+.++++|++++++.+ ++..++.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~ 157 (341)
T cd05281 79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV 157 (341)
T ss_pred CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence 99999998841 3588999999999999999999998655 5667778888776
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
. ...++|++++|.|+ |++|++++++++..|+ +++++++++++.+.++++|.+.+++.+..++. .+.+..+++++|
T Consensus 158 ~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~vd 233 (341)
T cd05281 158 L--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGVD 233 (341)
T ss_pred H--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCCC
Confidence 4 34578999999875 9999999999999999 78888888888888889999888887776777 778877777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchh-hHhhcceEEEEee
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQGIV 263 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 263 (274)
++||+.|. ......++.++++|+++.+|.... ....++. .+..++..+.++.
T Consensus 234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T cd05281 234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGIT 287 (341)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEe
Confidence 99999976 457888999999999999986544 2233322 2555667776654
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=229.27 Aligned_cols=237 Identities=33% Similarity=0.495 Sum_probs=194.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC-C
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-R 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-~ 78 (274)
+|++++..++++..++..+.+.|. +.++||+||+.++++|++|+....+........|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 589999998887555555555553 49999999999999999999887543222122367899999999999999998 8
Q ss_pred CCCCCEEEEEe-----cCCeeeeEEeeeCC----CeEECCCCCCHHhhccCcchHHHHHHHHHhhc-CCCCCCEEEEecC
Q 024011 79 WKVGDQVCALL-----GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGG 148 (274)
Q Consensus 79 ~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~g~~vlI~Ga 148 (274)
|++||+|+++. .+|+|++|++++.. .++++|+++++++++.++.+..++|+++.+.. .+++|++++|+|+
T Consensus 81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga 160 (352)
T cd08247 81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG 160 (352)
T ss_pred CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence 99999999875 26899999999987 78999999999999999999999999987776 7999999999999
Q ss_pred CchHHHHHHHHHHHc-CC-eEEEEecChhhHHHHHHcCCCEEEeCCCCc---HHHHHHHHhC-CCCccEEEECCCh-hhH
Q 024011 149 SSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEETG-GKGVDVILDCMGA-SYF 221 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~-g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~-~~~~d~vi~~~g~-~~~ 221 (274)
++++|.+++++++.. +. +++++. ++++.+.++++|.+.+++.+..+ +...+.+... ++++|.+||+.|+ ...
T Consensus 161 ~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~ 239 (352)
T cd08247 161 STSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLF 239 (352)
T ss_pred CchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHH
Confidence 999999999999987 45 566665 55556677889998888876655 5555555443 5689999999998 567
Q ss_pred HHhhhccc---cCCEEEEEe
Q 024011 222 QRNLGSLN---IDGRLFIIG 238 (274)
Q Consensus 222 ~~~~~~l~---~~g~~v~~g 238 (274)
...+++++ ++|+++.++
T Consensus 240 ~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 240 PHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred HHHHHHhCccCCCCEEEEEe
Confidence 78889999 999999875
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=227.32 Aligned_cols=250 Identities=32% Similarity=0.426 Sum_probs=204.1
Q ss_pred cCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCCCCCCCE
Q 024011 7 TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSRWKVGDQ 84 (274)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 84 (274)
++++.+ +++++.|.|.|+++||+||+.++++|++|...+.+... ....+|.++|+|++|+|+++|+++++|++||+
T Consensus 5 ~~~~~~--~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 82 (340)
T TIGR00692 5 TKPGYG--AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY 82 (340)
T ss_pred ccCCCC--cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence 455554 88899999999999999999999999999987655321 11234668999999999999999999999999
Q ss_pred EEEE---------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC
Q 024011 85 VCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL 137 (274)
Q Consensus 85 V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 137 (274)
|++. ...|+|++|++++.+.++++|++++++++ +++.++.++++++ ....
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~ 159 (340)
T TIGR00692 83 VSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP 159 (340)
T ss_pred EEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC
Confidence 9872 24589999999999999999999998665 4677888888876 3457
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++|++++|.|+ |++|.+++++++..|++ |+++++++++.+.+++++.+.+++....++.+.+.+..+++++|+++|+.
T Consensus 160 ~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~ 238 (340)
T TIGR00692 160 ISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMS 238 (340)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECC
Confidence 78999999774 99999999999999996 88887888888888899998888887778888888877777899999998
Q ss_pred Ch-hhHHHhhhccccCCEEEEEecCCCCccccchh-hHhhcceEEEEee
Q 024011 217 GA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQGIV 263 (274)
Q Consensus 217 g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 263 (274)
|. ......+++++++|+++.+|..... ..++.. .++.+++++.+..
T Consensus 239 g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 286 (340)
T TIGR00692 239 GAPKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGIT 286 (340)
T ss_pred CCHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEe
Confidence 85 4578889999999999999875432 233333 4566777777654
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-31 Score=223.72 Aligned_cols=246 Identities=25% Similarity=0.350 Sum_probs=205.7
Q ss_pred cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhh-cCCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEec
Q 024011 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (274)
Q Consensus 13 ~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~-~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (274)
+.+++++.+.|++.++||+||+.++++|++|++.+ .+.... ....|.++|+|++|+|+.+|++++.+++||+|+++.
T Consensus 5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 35999999999999999999999999999999887 665422 122467899999999999999999999999999885
Q ss_pred CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEE
Q 024011 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFV 169 (274)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~ 169 (274)
.|+|++|+.++.+.++++|+++ ..++.+..++.++++++. ..+++++++++|+| .|++|.+++++++..|++ +++
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~ 159 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIA 159 (312)
T ss_pred CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEE
Confidence 5889999999999999999988 233322377888888885 78889999999997 589999999999999998 999
Q ss_pred EecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccc
Q 024011 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELN 248 (274)
Q Consensus 170 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 248 (274)
+++++++.+.++++|.+.+++.+..++.+.+.+.+.+.++|+++|+.|. ......+++++++|+++.+|........++
T Consensus 160 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~ 239 (312)
T cd08269 160 IDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVP 239 (312)
T ss_pred ECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccC
Confidence 9998888888889999888887777888888888777789999999975 457888999999999999986643334455
Q ss_pred hhhHhhcceEEEEee
Q 024011 249 ITSLFAKRLTVQGIV 263 (274)
Q Consensus 249 ~~~~~~~~~~i~g~~ 263 (274)
+..+..+++++.++.
T Consensus 240 ~~~~~~~~~~~~~~~ 254 (312)
T cd08269 240 FQTWNWKGIDLINAV 254 (312)
T ss_pred HHHHhhcCCEEEEec
Confidence 555666777776654
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-31 Score=225.54 Aligned_cols=248 Identities=27% Similarity=0.411 Sum_probs=199.1
Q ss_pred EEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhc-CCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCC
Q 024011 5 VITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVG 82 (274)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 82 (274)
++++++ .+++++.+.|.++++||+||+.++++|++|++... +.+.. ....|.++|+|++|+|+++|+++++|++|
T Consensus 2 ~~~~~~---~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~G 78 (339)
T cd08232 2 VIHAAG---DLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPG 78 (339)
T ss_pred eeccCC---ceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCC
Confidence 455554 49999999999999999999999999999998764 32211 12346789999999999999999999999
Q ss_pred CEEEEE-------------------------e-------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 83 DQVCAL-------------------------L-------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 83 d~V~~~-------------------------~-------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|+|++. . .+|+|++|+.++.+.++++|+++++++++. ..++.++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~ 157 (339)
T cd08232 79 QRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHA 157 (339)
T ss_pred CEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHH
Confidence 999862 1 258999999999999999999999999875 5788899998
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh-CCCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-GGKG 208 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 208 (274)
+.+.... ++++|||.|+ +++|.+++++++..|+ +++++++++++.+.+++++.+.+++.+..++ .+.. ...+
T Consensus 158 l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~~~~~~~ 231 (339)
T cd08232 158 VNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAYAADKGD 231 (339)
T ss_pred HHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhhhccCCC
Confidence 8666556 8999999875 8999999999999999 8999988888888888899888887665442 2222 2345
Q ss_pred ccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|. ......++.++++|+++.++... .....+...++.+++++.+..
T Consensus 232 vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T cd08232 232 FDVVFEASGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSF 286 (339)
T ss_pred ccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEe
Confidence 9999999985 45788899999999999998654 223344555566777777654
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-30 Score=219.73 Aligned_cols=236 Identities=37% Similarity=0.637 Sum_probs=204.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++..++....+++++.+.|.++++||+||+.++++|++|...+.+... .....|..+|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 8999999887766677888888888999999999999999999998877543 12234778999999999999999999
Q ss_pred CCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+++||+|+++. .+|+|++|+.++...++++|+++++.+++.+.....++++++.....+.+|++++|+|+++.+|.+
T Consensus 81 ~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~ 160 (309)
T cd05289 81 FKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSF 160 (309)
T ss_pred CCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Confidence 99999999885 258899999999999999999999999998999999999998777778999999999998999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|++++++++++ +.+.+++++.+..++....++.. ...+.++|.++++.|+......+++++++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v 235 (309)
T cd05289 161 AVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLV 235 (309)
T ss_pred HHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEE
Confidence 9999999999999998777 77888888887777766555433 344457999999999888889999999999999
Q ss_pred EEecCC
Q 024011 236 IIGTQG 241 (274)
Q Consensus 236 ~~g~~~ 241 (274)
.++...
T Consensus 236 ~~g~~~ 241 (309)
T cd05289 236 SIAGPP 241 (309)
T ss_pred EEcCCC
Confidence 998654
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-30 Score=219.33 Aligned_cols=260 Identities=37% Similarity=0.579 Sum_probs=214.9
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|++++...+....+++++.+.|.|.++||+||+.++++|++|.....+.++.....|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 57788777766668888888888899999999999999999999888765433345778999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||+|+++..+|+|++|+.++.+.++++|+++++++++.++.+..++|+++.+...+++|++++|+|+++++|.+++++++
T Consensus 81 G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~ 160 (337)
T cd08275 81 GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCK 160 (337)
T ss_pred CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHH
Confidence 99999987678999999999999999999999999998999999999998888889999999999999999999999999
Q ss_pred Hc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 162 CQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 162 ~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.. +..++.. .++++.+.+++++.+.+++....++.+.+...++ .++|+++|+.|+......+++++++|+++.+|..
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~ 238 (337)
T cd08275 161 TVPNVTVVGT-ASASKHEALKENGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA 238 (337)
T ss_pred HccCcEEEEe-CCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHhhccCcEEEEEeec
Confidence 98 3333222 2345777788889888888777777777777664 5799999999988788899999999999999865
Q ss_pred CCCc----------------cccchhhHhhcceEEEEee
Q 024011 241 GGAK----------------TELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 241 ~~~~----------------~~~~~~~~~~~~~~i~g~~ 263 (274)
.... ..+....++.+++++.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (337)
T cd08275 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFN 277 (337)
T ss_pred CCcCcccccccccccccccccccCHHHHhhcCceEEEee
Confidence 4210 1122234566777777765
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-30 Score=217.06 Aligned_cols=219 Identities=36% Similarity=0.537 Sum_probs=197.8
Q ss_pred CCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEe--cCCeeeeEEe
Q 024011 22 DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL--GGGGYAEKVA 99 (274)
Q Consensus 22 ~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--~~g~~~~~~~ 99 (274)
.|++.+++|+||+.++++|+.|+....+.++....+|.++|+|++|+|+++|++++++++||+|+++. .+|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 46688999999999999999999998887654445678899999999999999999999999999874 3489999999
Q ss_pred eeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH
Q 024011 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (274)
Q Consensus 100 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~ 179 (274)
++.+.++++|+++++++++.++.+..++|+++ +...+++|++++|+++++++|++++++++..|++++++++++++.+.
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 160 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEY 160 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999998 47889999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++++|.+.+++....++.+.+.+.+.+.++|.++++.++......+++++++|+++.++...
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 161 LKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTA 222 (303)
T ss_pred HHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccC
Confidence 99999998888877778888888777778999999998877888899999999999987654
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.9e-31 Score=219.30 Aligned_cols=202 Identities=25% Similarity=0.370 Sum_probs=172.2
Q ss_pred CCCCceeEEEEEecCCCC------CCCCCCEEEEEe----------------------------------cCCeeeeEEe
Q 024011 60 YPGLECSGTILSVGKNVS------RWKVGDQVCALL----------------------------------GGGGYAEKVA 99 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~~~~~~ 99 (274)
++|||++|+|+++|++++ .+++||||+... .+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 579999999999999998 899999996521 2489999999
Q ss_pred eeCC-CeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhH
Q 024011 100 VPAG-QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL 177 (274)
Q Consensus 100 ~~~~-~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~ 177 (274)
+|.. .++++|+++++++++.+.+...++|+++.+ ....+|++++|+|+ |++|++++|+++..|++ |++++++++++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 9997 699999999999999998899999998854 45568999999997 89999999999999996 88888899999
Q ss_pred HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCC-CCccccchhhHhhc
Q 024011 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAK 255 (274)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~ 255 (274)
+.++++|++.+++.+. ..+.+.+.+.+.++|++||++|.. .++.++++++++|+++.+|... .....++...++.+
T Consensus 159 ~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~ 236 (280)
T TIGR03366 159 ELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRR 236 (280)
T ss_pred HHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhC
Confidence 9999999988887543 234555666667899999999865 4788999999999999999754 23456778888999
Q ss_pred ceEEEEeecc
Q 024011 256 RLTVQGIVPL 265 (274)
Q Consensus 256 ~~~i~g~~~~ 265 (274)
++++.|+...
T Consensus 237 ~~~i~g~~~~ 246 (280)
T TIGR03366 237 WLTIRGVHNY 246 (280)
T ss_pred CcEEEecCCC
Confidence 9999998764
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=213.78 Aligned_cols=233 Identities=38% Similarity=0.593 Sum_probs=193.9
Q ss_pred EEcCCCCCcce--EEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 5 VITQPGSPEVL--QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 5 ~~~~~~~~~~~--~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+++..+++..+ ++++.+.|+++++||+|++.++++|++|.+...|.++. ....|..+|||++|+|+++|+++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~ 81 (319)
T cd08267 2 VYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK 81 (319)
T ss_pred eeCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence 34455555444 88899999999999999999999999999988775521 123456889999999999999999999
Q ss_pred CCCEEEEEec---CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||+|++... .|+|++|+.++.+.++++|+++++++++.+.++..++|+++.+...+++|++++|+|++|++|++++
T Consensus 82 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~ 161 (319)
T cd08267 82 VGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAV 161 (319)
T ss_pred CCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHH
Confidence 9999998853 5899999999999999999999999999999999999999988777999999999999999999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh--hHHHhhhccccCCEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLF 235 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v 235 (274)
++++..|++|++++++ ++.+.+++++.+.+++....++. .....++++|+++++.|+. .....+..++++|+++
T Consensus 162 ~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i 237 (319)
T cd08267 162 QIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYV 237 (319)
T ss_pred HHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEE
Confidence 9999999999998865 77788888998888776654443 3344556799999999853 2333444599999999
Q ss_pred EEecCC
Q 024011 236 IIGTQG 241 (274)
Q Consensus 236 ~~g~~~ 241 (274)
.+|...
T Consensus 238 ~~g~~~ 243 (319)
T cd08267 238 SVGGGP 243 (319)
T ss_pred Eecccc
Confidence 998654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=205.75 Aligned_cols=210 Identities=36% Similarity=0.582 Sum_probs=189.1
Q ss_pred CeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEE
Q 024011 28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP 107 (274)
Q Consensus 28 ~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ 107 (274)
+||+||+.++++|++|++...+.++ ..|.++|||++|+|+++|++++.+++||+|+++. .|+|++|+.++.+.+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~ 76 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK 76 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence 5899999999999999998877652 3467899999999999999999999999999885 58999999999999999
Q ss_pred CCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC--C
Q 024011 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--A 185 (274)
Q Consensus 108 ~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g--~ 185 (274)
+|+++++.+++.++++..+++.++.+...+++|++++|+|+.|++|++++++++..|++++++++++++.+.+++.+ .
T Consensus 77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~ 156 (293)
T cd05195 77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV 156 (293)
T ss_pred CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence 99999999999999999999999878788999999999998999999999999999999999999989988888887 6
Q ss_pred CEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+..++....++.+.+.+.+.++++|.++++.|+......+++++++|+++.++...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 157 DHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred ceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccc
Confidence 77777766677778888777778999999999888889999999999999998654
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=200.18 Aligned_cols=205 Identities=36% Similarity=0.600 Sum_probs=184.6
Q ss_pred EEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCC
Q 024011 32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 32 V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
||+.++++|++|++...+.++ .|.++|||++|+|+++|++++.+++||+|+++. +|+|++|+.++.+.++++|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~ 76 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-PGSFATYVRTDARLVVPIPDG 76 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-CCceeeEEEccHHHeEECCCC
Confidence 789999999999999877654 256899999999999999999999999999985 589999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC--CEEE
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCI 189 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~--~~~~ 189 (274)
+++++++.+..+..+++.++.+...+++|++++|+|+.+.+|+++.++++..|++|+++++++++.+.++++|. +..+
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 156 (288)
T smart00829 77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF 156 (288)
T ss_pred CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence 99999999999999999998777889999999999989999999999999999999999999999999988987 6777
Q ss_pred eCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+....++.+.+.+...++++|.++|+.|+......++.++++|+++.+|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 208 (288)
T smart00829 157 SSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRD 208 (288)
T ss_pred eCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcC
Confidence 7777777777877777778999999999777888899999999999998653
|
Enoylreductase in Polyketide synthases. |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-25 Score=176.44 Aligned_cols=239 Identities=23% Similarity=0.339 Sum_probs=188.7
Q ss_pred CCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCC----ceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEE
Q 024011 23 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL----ECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKV 98 (274)
Q Consensus 23 ~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~----e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~ 98 (274)
.++++++|+||.++-+..|.....++...+..-..|+.||. .++|+|++ ++.+++++||.|+++. +|.+|.
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~---gWeeys 107 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV---GWEEYS 107 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---cceEEE
Confidence 34699999999999999888655443322221112333332 66889998 5778899999999996 699999
Q ss_pred eeeCCC--eEECCC--CCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 99 AVPAGQ--VLPVPS--GVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 99 ~~~~~~--~~~~p~--~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+++... .++++. +.++.-. ..+.++.+|||..+.+...++.|++++|.||+|.+|+++-|+++.+||+|+.++-+
T Consensus 108 ii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS 187 (343)
T KOG1196|consen 108 VITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGS 187 (343)
T ss_pred EecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCC
Confidence 997653 444443 3333332 25789999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHH-HcCCCEEEeCCCC-cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccc-----
Q 024011 174 EEKLAVCK-DLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE----- 246 (274)
Q Consensus 174 ~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~----- 246 (274)
.++.+.++ ++|.+..+|+.++ +..+.+.+ ..+.|+|+-|||+|+..++..+..|+.+||++.||....+...
T Consensus 188 ~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r-~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~ 266 (343)
T KOG1196|consen 188 KEKVDLLKTKFGFDDAFNYKEESDLSAALKR-CFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGL 266 (343)
T ss_pred hhhhhhhHhccCCccceeccCccCHHHHHHH-hCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccc
Confidence 99999887 5799999999887 55555554 5567899999999999999999999999999999988744332
Q ss_pred cchhhHhhcceEEEEeecccc
Q 024011 247 LNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 247 ~~~~~~~~~~~~i~g~~~~~~ 267 (274)
-++..++++++.+.|+...+.
T Consensus 267 ~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 267 HNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred cchhhheeeeEEeeeEEeech
Confidence 234667889999999876643
|
|
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=173.89 Aligned_cols=194 Identities=30% Similarity=0.440 Sum_probs=158.1
Q ss_pred CCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhc
Q 024011 56 GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135 (274)
Q Consensus 56 ~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~ 135 (274)
.+|.++|||++|+|+++|++++.+++||+|+++ +.|++|+.++.+.++++|+++++++++.+ ++.+++|+++. ..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~ 93 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-DA 93 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hc
Confidence 468899999999999999999999999999987 36999999999999999999999998887 78999999874 68
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcC-CCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++++|++++|+|+ |.+|++++++++..|++ |+++++++++.+.++++| .+.+++... ..+.+.++|.+|
T Consensus 94 ~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~d~vl 164 (277)
T cd08255 94 EPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA--------DEIGGRGADVVI 164 (277)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch--------hhhcCCCCCEEE
Confidence 8999999999975 99999999999999998 999999999999888888 444433221 122445799999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.+. ......+++++++|+++.+|..... .......+..+..++.+...
T Consensus 165 ~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd08255 165 EASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQV 215 (277)
T ss_pred EccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecc
Confidence 99875 4578889999999999999876544 22222334445556666543
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=194.29 Aligned_cols=244 Identities=26% Similarity=0.376 Sum_probs=206.2
Q ss_pred CCCcceEEEeecCC---CCCCCeEEEEEeeeecChhhhHhhcCCCCCCC------CCCCCCCCceeEEEEEecCCCCCCC
Q 024011 10 GSPEVLQLQEVEDP---QIKDDEVLIKVEATALNRADTLQRKGSYPPPK------GASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 10 ~~~~~~~~~~~~~~---~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|+...++|.+.|.. +..++.-+.-|.|++||..|+....|+.+... ....++|.||+|+- .
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------A 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------C
Confidence 44455777777754 34778889999999999999999999876422 23567899999973 5
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
-|.||.++.+--++++.+.++.+.+|.+|.++.+++|++.++.+.|+|++|..+++.++|+++||++++||+|++++.++
T Consensus 1494 ~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiA 1573 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIA 1573 (2376)
T ss_pred CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHH
Confidence 59999999888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEE
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (274)
..+|++|+.++-+.++.+++.+ +....+-|.++.+|..-+...+.++|+|+|+|....+.++..++||...|||..
T Consensus 1574 La~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLE 1653 (2376)
T KOG1202|consen 1574 LAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLE 1653 (2376)
T ss_pred HHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeee
Confidence 9999999999999999998874 455666678888999999999999999999999998999999999999999999
Q ss_pred EecCCCCccccc-hhhHhhcceEEEEeec
Q 024011 237 IGTQGGAKTELN-ITSLFAKRLTVQGIVP 264 (274)
Q Consensus 237 ~g~~~~~~~~~~-~~~~~~~~~~i~g~~~ 264 (274)
+|-..-.. .-+ -+..+.++.+.-|+..
T Consensus 1654 IGKfDLSq-NspLGMavfLkNvsfHGiLL 1681 (2376)
T KOG1202|consen 1654 IGKFDLSQ-NSPLGMAVFLKNVSFHGILL 1681 (2376)
T ss_pred ecceeccc-CCcchhhhhhcccceeeeeh
Confidence 98653111 112 2334556777777654
|
|
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.8e-19 Score=126.76 Aligned_cols=82 Identities=40% Similarity=0.618 Sum_probs=70.3
Q ss_pred CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEe-----------------
Q 024011 27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL----------------- 89 (274)
Q Consensus 27 ~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------- 89 (274)
|+||+|||.++|||++|++.+.+........|.++|||++|+|+++|+++++|++||+|+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999996555557899999999999999999999999999998732
Q ss_pred ----------cCCeeeeEEeeeCCCeEEC
Q 024011 90 ----------GGGGYAEKVAVPAGQVLPV 108 (274)
Q Consensus 90 ----------~~g~~~~~~~~~~~~~~~~ 108 (274)
.+|+|+||+++|.+.++++
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 2599999999999998874
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.7e-17 Score=120.66 Aligned_cols=117 Identities=40% Similarity=0.733 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC-hhhHHHhhhccc
Q 024011 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLN 229 (274)
Q Consensus 151 ~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~ 229 (274)
++|++++|+|+..|++|+++++++++++.++++|++.+++.+..++.+++.+.+++.++|+||||+| ...++.++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999999999999998888999999999 567999999999
Q ss_pred cCCEEEEEecCCCCccccchhhHhhcceEEEEeecccc
Q 024011 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
++|+++++|........++...++.+++++.|+....+
T Consensus 81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 118 (130)
T PF00107_consen 81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSP 118 (130)
T ss_dssp EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGH
T ss_pred cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCH
Confidence 99999999998867789999999999999999998753
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.5e-11 Score=105.91 Aligned_cols=129 Identities=18% Similarity=0.222 Sum_probs=98.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCC-------------cHHHHHHH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTE-------------DFVARVKE 202 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~~~~~~~~ 202 (274)
..++++|+|+|+ |.+|+++++.++.+|++|+++++++++++.++++|++.+ ++..++ ++.+...+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 467999999997 999999999999999999999999999999999999854 444221 22222222
Q ss_pred HhCC--CCccEEEECCChh------h-HHHhhhccccCCEEEEEecCCCCc--cccchhhHhh-cceEEEEeeccc
Q 024011 203 ETGG--KGVDVILDCMGAS------Y-FQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFA-KRLTVQGIVPLI 266 (274)
Q Consensus 203 ~~~~--~~~d~vi~~~g~~------~-~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~-~~~~i~g~~~~~ 266 (274)
.+.+ +++|+||+++|.+ . .+..++.++++|++++++...+.. ...+...++. +++++.|.++..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc
Confidence 2221 4699999999963 2 488999999999999999854332 3444455665 899999988653
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-12 Score=101.43 Aligned_cols=78 Identities=27% Similarity=0.477 Sum_probs=59.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--C--EEEeCCCCcH----HHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D--VCINYKTEDF----VARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~--~~~~~~~~~~----~~~~~~~~~~~~~ 209 (274)
.++.++|+||++|+|.++++.+...|++|+++.|+.++++.+. +++. . ..+|..+.+. .+.+.+.++ .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g--~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG--RI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC--cc
Confidence 4589999999999999999999999999999999999998876 5662 2 2245544332 233333333 39
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+++||+|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999995
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=88.83 Aligned_cols=81 Identities=23% Similarity=0.377 Sum_probs=62.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC----CC-EE--EeCCCCcHHHHHHHHhCC--C
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG----AD-VC--INYKTEDFVARVKEETGG--K 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g----~~-~~--~~~~~~~~~~~~~~~~~~--~ 207 (274)
..+++++|+||++|||...++.+.+.|++++++.|++++++.+. ++. .. .+ .|..+.+..+.+.+.... .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999999999987765 222 11 12 355555556666554333 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 68999999995
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-08 Score=88.05 Aligned_cols=122 Identities=19% Similarity=0.200 Sum_probs=96.4
Q ss_pred HHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+.++.+..+ .-+|++|+|.|+ |.+|+.+++.++..|++|+++++++.+++.++.+|++.+. ..+ ..
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~------~~e----~v-- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMT------MEE----AV-- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEcc------HHH----HH--
Confidence 444434333 468999999997 9999999999999999999999999999999998875431 111 11
Q ss_pred CCccEEEECCChhh-HHHh-hhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 207 KGVDVILDCMGASY-FQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~-~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+.|+||+++|... +... ++.++++|+++.+|.. ...++...+..+++++.++..+
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~ 313 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQ 313 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCC
Confidence 24899999999754 5554 8999999999999954 3578888888899999988876
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.5e-10 Score=91.43 Aligned_cols=78 Identities=26% Similarity=0.386 Sum_probs=56.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E----EeCCCCcHH----HHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C----INYKTEDFV----ARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~----~~~~~~~~~----~~~~~~~~ 205 (274)
.|+.|+|+||++|||.+++..+.+.|++++.+.|+.++++.+ ++.+... + +|..+.+.. +++....+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 489999999999999999999999999999999888877655 3444332 2 244433322 23333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 91 --~vDvLVNNAG~ 101 (282)
T KOG1205|consen 91 --RVDVLVNNAGI 101 (282)
T ss_pred --CCCEEEecCcc
Confidence 49999999995
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.4e-08 Score=76.25 Aligned_cols=78 Identities=27% Similarity=0.394 Sum_probs=62.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC---CEEEeCCCCc----HHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTED----FVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~---~~~~~~~~~~----~~~~~~~~~~~~~~d~ 211 (274)
.|.++||+|+++|||++.++.+.+.|-+|+++.|++++++++++... ..+.|..+.+ +.+++.+..+. .++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~--lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPN--LNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCc--hhe
Confidence 47899999999999999999999999999999999999999986543 3345555544 45555554443 799
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
++||+|.
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9999995
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.9e-09 Score=86.32 Aligned_cols=78 Identities=22% Similarity=0.413 Sum_probs=57.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHcCC--CEEEeCCCCc----HHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGA--DVCINYKTED----FVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~g~--~~~~~~~~~~----~~~~~~~~~~~~~ 208 (274)
.|+.|||+|+++|+|.++++-+.++|+++++++.+.+.. +.+++.|. ....|.++.+ ..+++++..+ .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G--~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG--D 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence 589999999999999999999999999999999876643 34444442 2334544432 3344455554 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+++||+|.
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999995
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.4e-07 Score=88.59 Aligned_cols=114 Identities=22% Similarity=0.258 Sum_probs=74.9
Q ss_pred eeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
++.+|..++...++.+ +.++.+++.....+ .....+|++++|+|++|++|.++++.+.+.|++|++++|
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r 454 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADL 454 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC
Confidence 4667777777777776 66666666411000 122346899999999999999999999999999999999
Q ss_pred ChhhHHHHH-HcCC--C---EEEeCCCCcHHHHHHHHh--CCCCccEEEECCC
Q 024011 173 SEEKLAVCK-DLGA--D---VCINYKTEDFVARVKEET--GGKGVDVILDCMG 217 (274)
Q Consensus 173 ~~~~~~~~~-~~g~--~---~~~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g 217 (274)
+.++++.+. +++. . ...|..+.+....+.+.. ...++|++|+|+|
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 988776554 3332 1 113444433222222211 1135999999998
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-07 Score=78.35 Aligned_cols=80 Identities=26% Similarity=0.437 Sum_probs=58.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh---CCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET---GGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~---~~~~~d~vi~ 214 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+.+.+...+ .|..+.+..+.+.+.. ....+|++|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46799999999999999999999999999999999988887776554433 3544433333332221 1135899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 83 ~Ag~ 86 (277)
T PRK05993 83 NGAY 86 (277)
T ss_pred CCCc
Confidence 9873
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-07 Score=73.69 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=58.8
Q ss_pred CCCEEEEecC-CchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EEEeCCCCcH----HHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGG-SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDF----VARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga-~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~----~~~~~~~~~~~~~d~ 211 (274)
+.+.|||+|+ .||||.+++.-+.+.|+.|+++.|+-+..+.+. +.|.. .-+|...++. ..++++. ..+..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence 4577899876 789999999999999999999999999887665 66643 2245544332 3334433 3346999
Q ss_pred EEECCChh
Q 024011 212 ILDCMGAS 219 (274)
Q Consensus 212 vi~~~g~~ 219 (274)
++||+|..
T Consensus 85 L~NNAG~~ 92 (289)
T KOG1209|consen 85 LYNNAGQS 92 (289)
T ss_pred EEcCCCCC
Confidence 99999964
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-06 Score=71.33 Aligned_cols=78 Identities=26% Similarity=0.361 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH-HHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|.++++.+.+.|++|+++.+ ++++.+.+ .+++...+ .|..+.+......+.. .++|++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4789999999999999999999999999988765 44555444 34444332 2333322222222222 348999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 83 ag~ 85 (237)
T PRK12742 83 AGI 85 (237)
T ss_pred CCC
Confidence 984
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.1e-06 Score=73.32 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=52.8
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhH---HHH-HHcCCCEEE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKL---AVC-KDLGADVCI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~---~~~-~~~g~~~~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.++++||+|+++ +||.++++.+.+.|++|+++.|+++.. +.+ ++.+....+ |..+.+..+ .+.+..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG- 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC-
Confidence 578999999986 999999999999999999998875432 222 234433322 444333222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 85 -~iD~lVnnAG~ 95 (271)
T PRK06505 85 -KLDFVVHAIGF 95 (271)
T ss_pred -CCCEEEECCcc
Confidence 59999999984
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=8e-07 Score=73.37 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=52.8
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC--EE--EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VC--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.|++++|+|++ ++||.++++.+.+.|++|+++.|+++..+.++++... .. .|..+.+..+ .+.+..+ .
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG--K 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC--C
Confidence 57999999998 7999999999999999999999875433444443221 12 2443332222 2333333 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999999984
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-05 Score=68.11 Aligned_cols=114 Identities=20% Similarity=0.247 Sum_probs=83.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+++++|.|. |.+|..+++.++..|++|++++|+.++.+.++++|...+. .+.+.+... .+|+||+++..
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~-------~~~l~~~l~--~aDiVI~t~p~ 220 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH-------LSELAEEVG--KIDIIFNTIPA 220 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec-------HHHHHHHhC--CCCEEEECCCh
Confidence 5899999997 8999999999999999999999998888888888765331 112333333 48999999875
Q ss_pred hh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 219 SY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 219 ~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ....++.+++++.+++++...+. ..+ .....+++.+.+..+.
T Consensus 221 ~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~~~~l 265 (296)
T PRK08306 221 LVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALLAPGL 265 (296)
T ss_pred hhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEEECCC
Confidence 43 45667889999999999887654 333 2344556666654443
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=9.5e-07 Score=73.42 Aligned_cols=80 Identities=20% Similarity=0.278 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c----CCCE-E--EeCCCCcHHHHHHHHh-CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADV-C--INYKTEDFVARVKEET-GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~----g~~~-~--~~~~~~~~~~~~~~~~-~~~~~ 209 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|+.++++.+.+ + +... . .|..+.+..+.+.+.. .-.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 47899999999999999999999999999999999877654432 1 2221 2 3444433333332221 11358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++++|+|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999984
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.8e-06 Score=77.13 Aligned_cols=127 Identities=22% Similarity=0.309 Sum_probs=89.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCC-------------CcHHHHHHHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT-------------EDFVARVKEE 203 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~-------------~~~~~~~~~~ 203 (274)
.++.+++|.|+ |.+|+++++.++.+|++|++.+++.++++.++++|.+.+ ++..+ +++.+...+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 35789999997 999999999999999999999999999999999988763 22211 1222222222
Q ss_pred hC--CCCccEEEECC---Ch--h--hHHHhhhccccCCEEEEEecCCCCccccchhh--Hh-hcceEEEEeecc
Q 024011 204 TG--GKGVDVILDCM---GA--S--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITS--LF-AKRLTVQGIVPL 265 (274)
Q Consensus 204 ~~--~~~~d~vi~~~---g~--~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~--~~-~~~~~i~g~~~~ 265 (274)
+. ..++|++|+++ |. + .....++.|++++.+++++...+..+...... +. ..++.+.|..+.
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nl 314 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDL 314 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCc
Confidence 22 24599999999 54 2 35777999999999999987765544433211 22 234777776654
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=9.4e-07 Score=72.86 Aligned_cols=82 Identities=22% Similarity=0.367 Sum_probs=63.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-----cCC---CEEEeCCCCc-HHHHHHHHhCCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGA---DVCINYKTED-FVARVKEETGGKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~---~~~~~~~~~~-~~~~~~~~~~~~~ 208 (274)
+-|++++|+||+.|||.+-+.-+.++|.+|+++.|++++++..++ .+. ....|....+ ..+.+.+.+.+-.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 447999999999999999999888899999999999999977652 221 1234655444 3566777776666
Q ss_pred ccEEEECCChh
Q 024011 209 VDVILDCMGAS 219 (274)
Q Consensus 209 ~d~vi~~~g~~ 219 (274)
+-+++||+|..
T Consensus 127 VgILVNNvG~~ 137 (312)
T KOG1014|consen 127 VGILVNNVGMS 137 (312)
T ss_pred eEEEEeccccc
Confidence 78999999963
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.2e-06 Score=70.60 Aligned_cols=78 Identities=28% Similarity=0.386 Sum_probs=57.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh--CCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g 217 (274)
+++||+|++|++|..+++.+.+.|++|++++|+.++.+.+.+.+...+ .|..+.+..+.+.+.. ...++|++|+++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 579999999999999999999999999999999888777665554433 4554433333333222 1135899999998
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 3
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=2e-06 Score=71.36 Aligned_cols=78 Identities=21% Similarity=0.308 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +++... . .|..+.+... .+.+..+ .+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFG--RVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence 4789999999999999999999999999999999987665543 444321 1 2443332222 2222222 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.5e-06 Score=70.50 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=53.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChh---hHHHH-HHcCCCEE--EeCCCCcHHHHHHHHh-C-CCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVC--INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~-~~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
.+++++|+|++ +|||.++++.+.+.|++|++++|+++ +++.+ ++++.... .|..+.+..+.+.+.. . -..
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47899999996 79999999999999999999998753 33333 23443322 3444433333332221 1 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 8999999984
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.7e-06 Score=70.20 Aligned_cols=80 Identities=24% Similarity=0.310 Sum_probs=57.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh--CCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~~ 215 (274)
++++++|+|++|++|..+++.+.+.|++|++++|++++++.+.+.+...+ .|..+.+..+.+.+.. ...++|++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46899999999999999999999999999999999988876655444332 3544433333332211 11359999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 984
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.4e-06 Score=69.28 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=52.3
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChh---hHHHHH-HcCCCEE--EeCCCCcHHHHHHHHh-C-CCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCK-DLGADVC--INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
.|++++|+|+++ |+|.++++.+.+.|++|++..|+++ .++.+. +.+.... .|..+.+..+.+.+.. . -..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999987 8999999999999999999887742 223332 2343332 3444433333333221 1 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999999974
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.9e-06 Score=69.48 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=52.0
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhh---HHHHH-HcCCCEEE--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEK---LAVCK-DLGADVCI--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~---~~~~~-~~g~~~~~--~~~~~~~~----~~~~~~~~~ 206 (274)
.|++++|+|++ ++||.++++.+.+.|++|++++|+++. ++.+. +++....+ |..+.+.. +.+.+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc--
Confidence 47999999997 499999999999999999999987543 23332 33332222 33333222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 248999999974
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.1e-07 Score=75.34 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh-C-CCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-G-GKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~ 216 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+++.... . .....|..+.+..+.+.+.. . -.++|++|+|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~---~-~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A 80 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND---V-DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc---e-EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 47899999999999999999999999999999987654320 0 01123444333222222211 1 12489999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 81 g~ 82 (258)
T PRK06398 81 GI 82 (258)
T ss_pred CC
Confidence 84
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.3e-06 Score=70.81 Aligned_cols=80 Identities=14% Similarity=0.230 Sum_probs=51.7
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh---hhHHHHH-Hc-CCC-EE--EeCCCCcHHHHHHHHh-CC-
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DL-GAD-VC--INYKTEDFVARVKEET-GG- 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~---~~~~~~~-~~-g~~-~~--~~~~~~~~~~~~~~~~-~~- 206 (274)
.|++++|+|++ +++|.++++.+.+.|++|+++.|+. ++++.+. ++ +.. .. .|..+.+..+.+.+.. ..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999997 7999999999999999999987653 3344443 23 221 11 3444433333332221 11
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 349999999873
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.8e-06 Score=70.57 Aligned_cols=78 Identities=24% Similarity=0.390 Sum_probs=51.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--H----HHHHHcCCCEE---EeCCCCcHHHH----HHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--L----AVCKDLGADVC---INYKTEDFVAR----VKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~----~~~~~~g~~~~---~~~~~~~~~~~----~~~~~~ 205 (274)
.++++||+|+++++|.++++.+.+.|++|+++.++.+. . +.+++.+.... .|..+.+..+. +.+..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999888765331 2 22333443322 23333322222 222232
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 134 --~iD~lV~nAg~ 144 (300)
T PRK06128 134 --GLDILVNIAGK 144 (300)
T ss_pred --CCCEEEECCcc
Confidence 49999999984
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.4e-06 Score=77.00 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE---EEeCCCCcHHHHHH----HHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV---CINYKTEDFVARVK----EETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~----~~~~~~~~ 209 (274)
..|+++||+|+++++|.++++.+.+.|++|++++|++++++.+.+ ++... ..|..+.+..+.+. +.. ..+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARW--GRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc--CCC
Confidence 357899999999999999999999999999999999888766653 44332 13444433222222 222 248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.3e-06 Score=69.44 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=51.3
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChh---hHHHHHH-cCCCEE--EeCCCCcHHHHHHHH-hCC-CC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVC--INYKTEDFVARVKEE-TGG-KG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~-~g~~~~--~~~~~~~~~~~~~~~-~~~-~~ 208 (274)
.|++++|+|+++ |+|.++++.+.+.|++|++..|++. ..+.+.. .+.... .|..+.+..+.+.+. ... ..
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 478999999975 8999999999999999999887732 2333322 222222 344443333333222 111 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999984
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-05 Score=70.41 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=77.1
Q ss_pred HHHHHHHHhhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHH
Q 024011 125 CTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 125 ~~a~~~l~~~~~~~-~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
-..|.++.+..++. .|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|... .+ . ++ .
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v-~~-----l-~e---a 264 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRV-MT-----M-EE---A 264 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEe-cC-----H-HH---H
Confidence 34455664443444 7999999996 99999999999999999999999888766665556542 21 1 11 2
Q ss_pred hCCCCccEEEECCChhh-HH-HhhhccccCCEEEEEecCC
Q 024011 204 TGGKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~ 241 (274)
. .+.|+||+++|... +. ..++.+++++.++.+|...
T Consensus 265 l--~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 265 A--ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred H--hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 2 24899999998754 44 5788899999999888765
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.7e-06 Score=68.53 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=50.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh------hhHHHHHHcCC-CEE--EeCCCCcHH----HHHHHH
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCKDLGA-DVC--INYKTEDFV----ARVKEE 203 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~------~~~~~~~~~g~-~~~--~~~~~~~~~----~~~~~~ 203 (274)
.|++++|+|++ +++|.++++.+.+.|++|+++.++. +.++.+.+.+. ... .|..+.+.. +.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 7999999999999999998876432 23333333222 122 344443322 233333
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
.+ ++|++|+|+|.
T Consensus 85 ~g--~iD~lv~nag~ 97 (258)
T PRK07370 85 WG--KLDILVHCLAF 97 (258)
T ss_pred cC--CCCEEEEcccc
Confidence 32 49999999984
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-05 Score=65.83 Aligned_cols=103 Identities=18% Similarity=0.283 Sum_probs=68.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc---CCCEEE--eCCCCcHHHHHHHHhC--CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCI--NYKTEDFVARVKEETG--GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~--~~~~~~~~~~~~~~~~--~~~~d 210 (274)
++++++|+|++|++|..+++.+.+.|++|++++|++++++.+. ++ +....+ |..+.+..+.+.+... -.++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999999988776552 22 222222 3333222222222111 12489
Q ss_pred EEEECCChhh------------------------HHHhhhccccCCEEEEEecCC
Q 024011 211 VILDCMGASY------------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 211 ~vi~~~g~~~------------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+++++|... ....+..++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999987421 223344566778999988764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.28 E-value=7e-06 Score=74.97 Aligned_cols=78 Identities=27% Similarity=0.342 Sum_probs=56.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE---EEeCCCCcHHHHHH----HHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTEDFVARVK----EETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~----~~~~~~~~d 210 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +++... ..|..+.+..+.+. +..+ ++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG--RID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence 5789999999999999999999999999999999988776553 454332 23444433332322 2222 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999984
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.6e-05 Score=65.84 Aligned_cols=81 Identities=20% Similarity=0.282 Sum_probs=60.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC-C----CEEEeCCCCc----HHHHHHHHhCCC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-A----DVCINYKTED----FVARVKEETGGK 207 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~----~~~~~~~~~~----~~~~~~~~~~~~ 207 (274)
.-+++.|+|+|+.+|.|..++..+...|++|++...+++..+.++..- . ...+|...++ ..+.+.+..+..
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 346788999999999999999999999999999998877766654211 1 2235555443 334445566667
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
+.-.+|||+|
T Consensus 106 gLwglVNNAG 115 (322)
T KOG1610|consen 106 GLWGLVNNAG 115 (322)
T ss_pred cceeEEeccc
Confidence 7889999999
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.8e-06 Score=62.42 Aligned_cols=81 Identities=19% Similarity=0.143 Sum_probs=61.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcHHHHHHHHhCC-CCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGG-KGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~-~~~d~vi~~ 215 (274)
.|..++++|+.-|||..+++-+...|++|+++.|+++.++.+-+..+..+. ..+-.+ .+.+.+.... ..+|.++|+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~-wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA-WEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH-HHHHHHhhcccCchhhhhcc
Confidence 588999999999999999999999999999999999998877665544332 222233 4455555544 347999999
Q ss_pred CChhh
Q 024011 216 MGASY 220 (274)
Q Consensus 216 ~g~~~ 220 (274)
+|...
T Consensus 85 AgvA~ 89 (245)
T KOG1207|consen 85 AGVAT 89 (245)
T ss_pred chhhh
Confidence 99654
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.1e-07 Score=71.40 Aligned_cols=78 Identities=27% Similarity=0.399 Sum_probs=55.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-HHHcCC--CEE---EeCCCCcH----HHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDLGA--DVC---INYKTEDF----VARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~~g~--~~~---~~~~~~~~----~~~~~~~~~~~~~ 209 (274)
.+.++|+|+++|||.++++.+.+.|+++.+.+++.+..+. ++.++. ++. .|....+. .++..+.++ .+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g--~p 91 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG--TP 91 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC--CC
Confidence 4678999999999999999999999999999987775544 445654 322 23333222 333334444 48
Q ss_pred cEEEECCChh
Q 024011 210 DVILDCMGAS 219 (274)
Q Consensus 210 d~vi~~~g~~ 219 (274)
++++||+|..
T Consensus 92 svlVncAGIt 101 (256)
T KOG1200|consen 92 SVLVNCAGIT 101 (256)
T ss_pred cEEEEcCccc
Confidence 9999999963
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.7e-06 Score=70.77 Aligned_cols=80 Identities=24% Similarity=0.349 Sum_probs=57.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCCCE----EEeCCC--CcHHHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADV----CINYKT--EDFVARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~~~----~~~~~~--~~~~~~~~~~~~~~ 207 (274)
.|++++|+||++++|.++++.+.+.|++|++++|++++++.+. + .+... ..|..+ .+..+.+.+..++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999999999999999999999998876543 1 11111 234432 23344555555544
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 56799999984
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.1e-06 Score=70.86 Aligned_cols=80 Identities=29% Similarity=0.444 Sum_probs=57.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+ ++.+.+.. .|..+.+..+.+.+.. ...++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999998877544 33454432 3444433333333221 11359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.3e-05 Score=69.05 Aligned_cols=78 Identities=19% Similarity=0.294 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHH----HhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKE----ETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~----~~~~~ 207 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+.+ ..+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g-- 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG-- 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC--
Confidence 4789999999999999999999999999999999988765443 3444332 34444333333322 232
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 48999999984
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.5e-06 Score=68.24 Aligned_cols=104 Identities=23% Similarity=0.349 Sum_probs=63.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCE-E--EeCCCCc----HHHHHHHH---
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-C--INYKTED----FVARVKEE--- 203 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~--~~~~~~~----~~~~~~~~--- 203 (274)
.+++++|+|+++++|.++++.+.+.|++|++.. +++++.+.+ ++.+... . .|..+.+ +.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 478999999999999999999999999998875 454544322 2223221 1 2332221 12222221
Q ss_pred -hCCCCccEEEECCChhh-----------H---------------HHhhhccccCCEEEEEecCCC
Q 024011 204 -TGGKGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 204 -~~~~~~d~vi~~~g~~~-----------~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (274)
.+..++|++|+|+|... + ..+++.+.+.|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12236999999998410 1 123444556688888877653
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.4e-06 Score=69.45 Aligned_cols=81 Identities=31% Similarity=0.394 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC------EEEeCCCCcHHHHHHHH-hC-
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD------VCINYKTEDFVARVKEE-TG- 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~------~~~~~~~~~~~~~~~~~-~~- 205 (274)
-.|++++|+|+++|||.+++..+.+.|++|+++.|++++++... ..+.. ...|....+..+.+.+. ..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999875554 22221 22344333323333221 11
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|+++||+|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 1349999999995
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.8e-05 Score=71.73 Aligned_cols=107 Identities=15% Similarity=0.205 Sum_probs=70.6
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH---------cCC-----CEEEeCCCCcHHH
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---------LGA-----DVCINYKTEDFVA 198 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---------~g~-----~~~~~~~~~~~~~ 198 (274)
...+.+.|++++|+||+|++|..+++.+.+.|++|++++|+.++++.+.+ .+. ..++..+..+ .+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PD 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HH
Confidence 34566789999999999999999999999999999999999887754422 121 1122222222 23
Q ss_pred HHHHHhCCCCccEEEECCChhh----------------HHHhhhccc--cCCEEEEEecCCC
Q 024011 199 RVKEETGGKGVDVILDCMGASY----------------FQRNLGSLN--IDGRLFIIGTQGG 242 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~----------------~~~~~~~l~--~~g~~v~~g~~~~ 242 (274)
.+.+..+ ++|+||+++|... ...+++.+. ..++||.++..+.
T Consensus 152 sI~~aLg--giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga 211 (576)
T PLN03209 152 QIGPALG--NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGT 211 (576)
T ss_pred HHHHHhc--CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchh
Confidence 3444443 4899999998521 112233332 2369999987653
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.4e-06 Score=71.32 Aligned_cols=78 Identities=24% Similarity=0.387 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--CEE---EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC---INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~~~---~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++. ... .|..+.+..+ .+.+..+ +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG--G 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC--C
Confidence 5789999999999999999999999999999999988776553 3432 111 3444432222 2222222 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 8999999984
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.3e-06 Score=69.27 Aligned_cols=78 Identities=23% Similarity=0.290 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh--hhHHHH----HHcCCCE---EEeCCCCcHHHHH----HHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC----KDLGADV---CINYKTEDFVARV----KEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~----~~~g~~~---~~~~~~~~~~~~~----~~~~~ 205 (274)
.+++++|+|+++++|.++++.+.+.|++|+++.++. +..+.+ ++.+... ..|..+.+....+ .+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 126 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL- 126 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 578999999999999999999999999999887543 233333 2333322 1244443322222 2222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++++++|.
T Consensus 127 -g~id~lv~~Ag~ 138 (294)
T PRK07985 127 -GGLDIMALVAGK 138 (294)
T ss_pred -CCCCEEEECCCC
Confidence 358999999873
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-05 Score=65.31 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=57.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++|+|++|++|..+++.+.+.|++|++++|++++.+.+++++.... .|..+.+..+.+.+.....++|++|+++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 579999999999999999999999999999999887766655433222 243343334444444444469999999874
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.3e-05 Score=63.33 Aligned_cols=102 Identities=20% Similarity=0.311 Sum_probs=63.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHH----HHHcCCCE-E--EeCCCCcHHHHHHHH-hCC-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAV----CKDLGADV-C--INYKTEDFVARVKEE-TGG-KG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~----~~~~g~~~-~--~~~~~~~~~~~~~~~-~~~-~~ 208 (274)
++++++|+|++|++|..+++.+.+.|++|+++.|+.+ ..+. ++..+... . .|..+.+....+.+. ... .+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999888653 3322 22333322 1 243333222222221 111 25
Q ss_pred ccEEEECCChh--------------------hHHHhhhccccCCEEEEEecC
Q 024011 209 VDVILDCMGAS--------------------YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 209 ~d~vi~~~g~~--------------------~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+|++|+++|.. .++.+.+.+..+|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89999998742 112344445556788888663
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.1e-06 Score=67.65 Aligned_cols=77 Identities=25% Similarity=0.404 Sum_probs=53.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC---C-CEE-E---eCCC-Cc---HHHHHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG---A-DVC-I---NYKT-ED---FVARVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g---~-~~~-~---~~~~-~~---~~~~~~~~~~~~ 207 (274)
|++++++|+.||||+.....+...|+.+.++..+.|..+...++. + ..+ + |... .+ ..+.+....+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg-- 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG-- 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC--
Confidence 899999999999999999999999999999888888766555432 2 111 1 2221 22 2223333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++||.+|-
T Consensus 83 ~iDIlINgAGi 93 (261)
T KOG4169|consen 83 TIDILINGAGI 93 (261)
T ss_pred ceEEEEccccc
Confidence 38999999995
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.6e-05 Score=65.93 Aligned_cols=78 Identities=29% Similarity=0.366 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-CCCE-E--EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADV-C--INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~~-~--~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
++++++|+|+++++|.++++.+.+.|++|++++|++++++.+.+. +... . .|..+.+.. +++.+..+ .+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG--KID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence 478999999999999999999999999999999998877766543 3221 1 233332222 22222232 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~li~~Ag~ 89 (262)
T TIGR03325 82 CLIPNAGI 89 (262)
T ss_pred EEEECCCC
Confidence 99999984
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.4e-05 Score=64.04 Aligned_cols=78 Identities=24% Similarity=0.368 Sum_probs=56.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+.+ .+...+ .|..+.+....+.+.. .++|++|+++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAA--GAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHh--CCCCEEEECC
Confidence 57899999999999999999999999999999999887765543 333222 2444333333333332 3589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 84
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.2e-05 Score=59.17 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=66.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh----
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA---- 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~---- 218 (274)
|+|+||+|.+|..+++.+.+.|++|++..|++++.+. ..+.. ++..+..+. +.+.+... ++|.||++.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~-~~~~~al~--~~d~vi~~~~~~~~~ 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDP-DSVKAALK--GADAVIHAAGPPPKD 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCH-HHHHHHHT--TSSEEEECCHSTTTH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhh-hhhhhhhh--hcchhhhhhhhhccc
Confidence 6899999999999999999999999999999998776 33333 333333333 44455554 59999999983
Q ss_pred -hhHHHhhhccccC--CEEEEEecCC
Q 024011 219 -SYFQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 219 -~~~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
......++.++.. .+++.++..+
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccceeeeccc
Confidence 2244555555443 3888887665
|
... |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.8e-05 Score=65.57 Aligned_cols=78 Identities=27% Similarity=0.347 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCC-EE--EeCCCCcHHHH----HHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VC--INYKTEDFVAR----VKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~--~~~~~~~~~~~----~~~~~~~~~~d 210 (274)
++++++|+|+++++|..+++.+.+.|++|++++|++++++.+.+ ++.. .. .|..+.+..+. +.+.. ..+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAF--GKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhc--CCCC
Confidence 47899999999999999999999999999999999887766643 3321 12 23333222222 22222 2489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.3e-05 Score=68.35 Aligned_cols=80 Identities=20% Similarity=0.326 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCCcHHHHHHHHh-C-CCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVARVKEET-G-GKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~~d~vi 213 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++.+.+. ++..-.. .|..+.+..+.+.+.. . ..++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4789999999999999999999999999999999988765443 2221122 2444333333332221 1 13599999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99984
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.4e-05 Score=59.01 Aligned_cols=81 Identities=27% Similarity=0.410 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHcCCCEEEeCCC----CcHHHHHHHHhCC-CCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKT----EDFVARVKEETGG-KGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~-~~~d~v 212 (274)
+|-..+|+|+.+++|.++++.+...|+.+++.+...++ .+.++++|...++...+ .+....+...... ...|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 46678999999999999999999999999999977775 46678899877764322 2222222222111 237999
Q ss_pred EECCChh
Q 024011 213 LDCMGAS 219 (274)
Q Consensus 213 i~~~g~~ 219 (274)
+||+|..
T Consensus 88 vncagia 94 (260)
T KOG1199|consen 88 VNCAGIA 94 (260)
T ss_pred eecccee
Confidence 9999964
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.8e-05 Score=62.83 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-H----HHHHHcCCCEE-E--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-L----AVCKDLGADVC-I--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~----~~~~~~g~~~~-~--~~~~~~~~----~~~~~~~~~ 206 (274)
++++++|+|++|++|..+++.+.+.|++++++.++.+. . +.+++.+.... + |..+.+.. +.+.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF-- 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--
Confidence 57899999999999999999999999999887765432 2 22233333222 2 33332222 2222223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 248999999984
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.8e-05 Score=66.68 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=75.9
Q ss_pred HHHHHhhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~~-~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+-++.+..++ -.|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|.... ...+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~leEal------ 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------TLEDVV------ 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------cHHHHH------
Confidence 3344343333 56999999996 999999999999999999999988877666666666532 121222
Q ss_pred CCccEEEECCChhh--HHHhhhccccCCEEEEEecCC
Q 024011 207 KGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (274)
...|++|.+.|... ....++.|++++.++.+|...
T Consensus 308 ~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 13799999999754 477899999999999998753
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.1e-05 Score=68.11 Aligned_cols=80 Identities=28% Similarity=0.397 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+. +.+... . .|..+.+..+.+.+.. .-.++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999988765543 223322 2 2443433333333211 11258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.3e-05 Score=62.12 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
++++++|+|++|++|..++..+.+.|++|++++|++++++... +.+... . .|..+.+..+.+.+.. . -.++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999887665432 223222 2 2443333222222211 1 1358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.2e-05 Score=66.99 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-C-CC-EE--EeCCCCcHHHHHHHHh--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-G-AD-VC--INYKTEDFVARVKEET--GGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g-~~-~~--~~~~~~~~~~~~~~~~--~~~ 207 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|+.++.+.+. +. + .. .. +|..+.+....+.+.. ...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999999987654432 21 1 11 11 3444432222222211 113
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 58999999984
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.3e-05 Score=63.49 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.. ..+.... +.... .|..+. +.+.+..+ ++|++|+|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~---~~~~~~~~--~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKE---ESLDKQLA--SLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCH---HHHHHhcC--CCCEEEEC
Confidence 3689999999999999999999999999999998763 2222111 11222 233322 23333443 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 985
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.3e-05 Score=62.33 Aligned_cols=78 Identities=27% Similarity=0.395 Sum_probs=57.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE-EEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.+..+.++..+... ..|..+.+..+.+.+.....++|++|+++|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 57999999999999999999999999999999988777776655432 2344444444444433444469999999875
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.5e-05 Score=64.58 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=34.2
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecChhhHHH
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~ 179 (274)
.|+++||+|+ ++|||.++++.+.+.|++|++ .|+..+++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~ 49 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNI 49 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhH
Confidence 5899999999 799999999999999999988 666555433
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=4e-05 Score=62.96 Aligned_cols=102 Identities=19% Similarity=0.233 Sum_probs=62.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhH----HHHHHcCCCE-E--EeCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADV-C--INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~----~~~~~~g~~~-~--~~~~~~~~~----~~~~~~~~~ 206 (274)
.++++||+|++|++|..+++.+.+.|+++++..++. ++. ..+++.+... . .|..+.+.. +.+.+..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-- 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc--
Confidence 368999999999999999999999999988776542 222 2223333322 2 233332222 2222223
Q ss_pred CCccEEEECCChhh--------------------------HHHhhhccccCCEEEEEecCCC
Q 024011 207 KGVDVILDCMGASY--------------------------FQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 207 ~~~d~vi~~~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
.++|.+|+++|... ...+.+.++..|+++.++...+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 25899999998410 1123344566788888877653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.3e-05 Score=63.66 Aligned_cols=78 Identities=26% Similarity=0.340 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. ..+... . .|..+.+..+ ++.+..+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG-- 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence 4789999999999999999999999999999999887765543 223221 1 3443332222 2223333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.2e-05 Score=65.46 Aligned_cols=77 Identities=23% Similarity=0.334 Sum_probs=54.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCCcHHHH----HHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVAR----VKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~----~~~~~~~~~~d~v 212 (274)
+++++|+|++|++|..+++.+...|++|++++|++++++.+. +++.... .|..+.+..+. +.+.. .++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL--GPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc--CCCCEE
Confidence 689999999999999999999999999999999988776553 3431222 24444332222 22222 358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999984
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00015 Score=60.83 Aligned_cols=109 Identities=18% Similarity=0.269 Sum_probs=76.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|++++|+|. |.+|.++++.++.+|++|++..|+.++.+.+.+.+...+ . .+.+.+... ..|+||++...
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~------~~~l~~~l~--~aDiVint~P~ 219 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P------LNKLEEKVA--EIDIVINTIPA 219 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c------HHHHHHHhc--cCCEEEECCCh
Confidence 4799999997 999999999999999999999999887777666664322 1 122333332 48999999875
Q ss_pred hhH-HHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEE
Q 024011 219 SYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260 (274)
Q Consensus 219 ~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 260 (274)
..+ ...++.++++..++.++...+. .++...-.+++..+
T Consensus 220 ~ii~~~~l~~~k~~aliIDlas~Pg~---tdf~~Ak~~G~~a~ 259 (287)
T TIGR02853 220 LVLTADVLSKLPKHAVIIDLASKPGG---TDFEYAKKRGIKAL 259 (287)
T ss_pred HHhCHHHHhcCCCCeEEEEeCcCCCC---CCHHHHHHCCCEEE
Confidence 442 4466778888888888876543 23333334444444
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.9e-05 Score=64.53 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=75.0
Q ss_pred HHHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
++.++.+..+ ...|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|... .+ . ++. .
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~-----l-eea---l- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRV-MT-----M-EEA---A- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEe-CC-----H-HHH---H-
Confidence 3444434333 367999999996 99999999999999999999998887766666666532 21 1 111 1
Q ss_pred CCCccEEEECCChhh-HH-HhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.|++|++.|... ++ ..+..+++++.++.+|...
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 23799999999755 44 4788999999999888753
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.8e-05 Score=65.06 Aligned_cols=80 Identities=26% Similarity=0.300 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-E-E--EeCCCCcHHHHHHHH-hC-CCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V-C--INYKTEDFVARVKEE-TG-GKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~-~--~~~~~~~~~~~~~~~-~~-~~~~d~v 212 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+.+.... . . .|..+.+....+.+. .. -.++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 367899999999999999999999999999999998887666543222 1 1 244333322222221 11 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999985
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.9e-05 Score=64.09 Aligned_cols=78 Identities=12% Similarity=0.153 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.|++++|+|+++++|.+++..+.+.|++|+++.|++++++.+. +.+.... .|..+.+.. +.+.+..+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN-R 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC-C
Confidence 4789999999999999999999999999999999988765442 3343322 233332222 22222233 1
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
.+|++|+|+|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 5999999997
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2e-05 Score=65.34 Aligned_cols=78 Identities=28% Similarity=0.391 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-CC-CE---EEeCCCCcHHHHH----HHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GA-DV---CINYKTEDFVARV----KEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g~-~~---~~~~~~~~~~~~~----~~~~~ 205 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +. +. .. ..|..+.+..+.+ .+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF- 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc-
Confidence 4789999999999999999999999999999999987765432 22 11 11 1244443323222 2222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 86 -g~id~li~~Ag~ 97 (265)
T PRK07062 86 -GGVDMLVNNAGQ 97 (265)
T ss_pred -CCCCEEEECCCC
Confidence 348999999984
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.7e-05 Score=61.59 Aligned_cols=78 Identities=27% Similarity=0.426 Sum_probs=53.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE----EEeCCCCcHHHHHHHHh--CCCCcc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV----CINYKTEDFVARVKEET--GGKGVD 210 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~----~~~~~~~~~~~~~~~~~--~~~~~d 210 (274)
++++|+|++|++|..+++.+.+.|++|++++|+++.++.+ +..+... ..|..+.+..+.+.+.. ...++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999988765443 2233321 24544433333332221 113489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.5e-05 Score=64.64 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc-----CCCE-E--EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GADV-C--INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~-~--~~~~~~~~~~----~~~~~~~ 205 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. ++ +... . .|..+.+... .+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF- 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999887765443 21 2221 1 2333322222 222223
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 85 -g~id~li~~ag~ 96 (260)
T PRK07063 85 -GPLDVLVNNAGI 96 (260)
T ss_pred -CCCcEEEECCCc
Confidence 248999999984
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.2e-05 Score=62.54 Aligned_cols=80 Identities=23% Similarity=0.300 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCCcHHHHHHHHh--CCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEET--GGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~ 214 (274)
.|++++|+|++|++|..+++.+.+.|++|++++|++.+.+... ++..... .|..+.+..+.+.+.. ...++|.+|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999999887765543 3433222 3444433333332221 1124899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9974
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.3e-05 Score=64.58 Aligned_cols=78 Identities=26% Similarity=0.414 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG-- 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC--
Confidence 4789999999999999999999999999999999988765543 2333222 2333332222 2222232
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 59999999984
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=7.5e-05 Score=61.87 Aligned_cols=83 Identities=31% Similarity=0.390 Sum_probs=56.9
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE----E----EeCCCCcHHHHHHHHhC-
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV----C----INYKTEDFVARVKEETG- 205 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~----~----~~~~~~~~~~~~~~~~~- 205 (274)
+.++...++|+|+++++|++++..++..|++|.++.|+.+++..+++ +.... + .|..+.+..+.+.+.+.
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 34555889999999999999999999999999999999999877753 22111 1 12212122222222221
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|.+|+|+|.
T Consensus 109 ~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGV 122 (331)
T ss_pred ccCCcceEEEecCc
Confidence 1248999999996
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00015 Score=63.22 Aligned_cols=120 Identities=13% Similarity=0.195 Sum_probs=79.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC-
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG- 217 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g- 217 (274)
+.+++|.|+ |.+|+.+++.++.+|++|++++++.++++.+.. ++......... .+.+.+... .+|+||++++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~--~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK--RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc--cCCEEEEcccc
Confidence 456889997 999999999999999999999999888777654 44432222221 223333333 4899999973
Q ss_pred --h--h--hHHHhhhccccCCEEEEEecCCCCccccchh------hHhhcceEEEEeecc
Q 024011 218 --A--S--YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT------SLFAKRLTVQGIVPL 265 (274)
Q Consensus 218 --~--~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~------~~~~~~~~i~g~~~~ 265 (274)
. + .....++.+++++.+++++...+........ .+...++.+.+..+.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nl 300 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANM 300 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCc
Confidence 2 1 1366778899999999998776544332211 223345666665443
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.1e-05 Score=63.46 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=55.1
Q ss_pred CCCCCEEEEecCCc-hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCCCEE----EeCCCCcHHHHHHHHh-C
Q 024011 137 LSPGESFLVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADVC----INYKTEDFVARVKEET-G 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g-~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~~~~----~~~~~~~~~~~~~~~~-~ 205 (274)
+..+++++|+|++| ++|.++++.+.+.|++|+++++++++++... + ++...+ .|..+.+..+.+.+.. .
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34579999999985 8999999999999999999998887665443 2 343222 2443333333333221 1
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|++|+|+|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 1258999999984
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.2e-05 Score=63.05 Aligned_cols=80 Identities=14% Similarity=0.202 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCCCEE---EeCCCCcHHHHHHHHh-C-CCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVC---INYKTEDFVARVKEET-G-GKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~d~ 211 (274)
.|++++|+|+++++|.++++.+.+.|++|+++++++.. .+.+++.+.... .|..+.+..+.+.+.. . -.++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999998876432 233344443322 3444433333332221 1 124999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999984
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=5e-05 Score=62.70 Aligned_cols=82 Identities=22% Similarity=0.280 Sum_probs=54.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhh-HHH----HHHcCC-C-EE--EeCCCCcHHHH-HHHHhC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEK-LAV----CKDLGA-D-VC--INYKTEDFVAR-VKEETG 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~-~~~----~~~~g~-~-~~--~~~~~~~~~~~-~~~~~~ 205 (274)
+..+++++|+|+++++|.++++.+.+.| ++|++++|++++ ++. +++.+. . .. .|..+.+..+. +.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 4568899999999999999999888775 899999998775 433 333332 1 22 34333332222 222222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..++|++|+++|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 2369999998875
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.6e-05 Score=63.68 Aligned_cols=81 Identities=31% Similarity=0.356 Sum_probs=56.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCC--EE--EeCCCCcHHHH----HHHHhCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--VC--INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~--~~--~~~~~~~~~~~----~~~~~~~ 206 (274)
..-+++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+.+ .... .. .|..+.+.... +.+..
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF-- 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh--
Confidence 33567999999999999999999999999999999998877665543 2222 22 24333332222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|+||+++|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 259999999985
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.5e-05 Score=62.85 Aligned_cols=77 Identities=26% Similarity=0.290 Sum_probs=55.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHH----HHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVA----RVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~----~~~~~~~~~~~d~vi~~ 215 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.++++.+++.+...+ .|..+.+... .+.+.. ...+|.++++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALT-DNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhc-CCCCeEEEEC
Confidence 579999999999999999999999999999999988887776665433 2443322222 222222 2358999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 874
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.3e-05 Score=62.13 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=52.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCCCE-E--EeCCCCcHHHHHHH-HhC-CCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV-C--INYKTEDFVARVKE-ETG-GKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d~ 211 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+... .+.+++.+... . .|..+.+....+.+ ... ..++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999999987531 23334444322 2 23333322222222 111 124899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999984
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.99 E-value=3e-05 Score=57.58 Aligned_cols=94 Identities=13% Similarity=0.183 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHH-HcCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|.|+ |++|.+++..+...|++ ++++.|+.++.+.+. .++.. ...+.++ .. +... .+|+||+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~----~~~~--~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LE----EALQ--EADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HC----HHHH--TESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HH----HHHh--hCCeEEE
Confidence 5899999997 99999999999999995 999999999887665 44322 2233222 11 1221 3899999
Q ss_pred CCChhhH---HHhhhcccc-CCEEEEEecCC
Q 024011 215 CMGASYF---QRNLGSLNI-DGRLFIIGTQG 241 (274)
Q Consensus 215 ~~g~~~~---~~~~~~l~~-~g~~v~~g~~~ 241 (274)
+++.... ...+....+ ...+++++.+.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccccCC
Confidence 9886432 222222222 24777776543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=9.8e-05 Score=57.01 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-EE--eCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~----~~~~~~~~ 207 (274)
.+++++|+|+++++|..++..+.+.|++|++++++.+..+.. .+.+... .. |..+.+.... +.+.. .
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~--G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF--S 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence 578999999999999999999999999999999887765333 2334332 22 3322221122 22222 3
Q ss_pred CccEEEECCChh
Q 024011 208 GVDVILDCMGAS 219 (274)
Q Consensus 208 ~~d~vi~~~g~~ 219 (274)
++|++|+|+|..
T Consensus 93 ~iDilVnnAG~~ 104 (169)
T PRK06720 93 RIDMLFQNAGLY 104 (169)
T ss_pred CCCEEEECCCcC
Confidence 489999999953
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.5e-05 Score=64.28 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-H---HHcCCCE---EEeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-C---KDLGADV---CINYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~---~~~g~~~---~~~~~~~~~~~~----~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+ ++++. + ++.+... ..|..+.+..+. +.+..+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-- 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG-- 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC--
Confidence 47899999999999999999999999999999998 44332 2 2233221 234444332222 222333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 48999999984
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.2e-05 Score=66.24 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
++++++|+|++|+||..+++.+.+.|++|++++|+.++.+.+. ++. .. .. .|..+.+....+.+.. ...++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4789999999999999999999999999999999988765443 221 11 11 2443333222222221 12348
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|++|+|+|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999998
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.4e-05 Score=63.85 Aligned_cols=78 Identities=26% Similarity=0.322 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++++.++++.+. ..+.... .|..+.+....+ .+.. .
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL--G 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc--C
Confidence 4789999999999999999999999999999999887665432 2333221 233333222222 2222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 48999999984
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.1e-05 Score=63.73 Aligned_cols=80 Identities=18% Similarity=0.346 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.++++||+|++|++|..+++.+.+.|++|++++++.+.++... ..+... .+ |..+.+..+.+.+.. ...++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999999876654432 223322 12 333322222222211 11248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=9.4e-05 Score=66.38 Aligned_cols=80 Identities=25% Similarity=0.399 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh--hhHHHH-HHcCCCEE-EeCCCCcHHHHHHHHhC--CCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGADVC-INYKTEDFVARVKEETG--GKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~--~~~~d~v 212 (274)
++++++|+|++|++|..+++.+.+.|++|++++++. +.++.+ .+++...+ .|..+.+..+.+.+... ..++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999999999999999998743 333333 34444322 45555443444433221 1258999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=6.4e-05 Score=62.34 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=51.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecChhh---HHHHH-HcCCCEE--EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEK---LAVCK-DLGADVC--INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~---~~~~~-~~g~~~~--~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+ +++||.++++.+.+.|++|+++.+++.. ++.+. +.+.... .|..+.+..+ .+.+..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-- 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW-- 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh--
Confidence 5789999996 6799999999999999999998765432 23332 2233222 2443332222 333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 249999999985
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.6e-05 Score=63.20 Aligned_cols=80 Identities=16% Similarity=0.258 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
+++++||+|++|++|.++++.+...|++|++++|+.++.+.+. ..+... . .|..+.+....+.+.. . -.++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999999887665443 223222 2 3444433333222211 1 1258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999983
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.6e-05 Score=65.23 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=55.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H----cCCCE----EEeCCCCc----HHHHHHHHh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADV----CINYKTED----FVARVKEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~~~----~~~~~~~~----~~~~~~~~~ 204 (274)
-.|.+++|+|+++|||..+++.+...|++|+...|+.++.+.++ + ..... .+|..+.. +.+.+.+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~- 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK- 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-
Confidence 35789999999999999999999999999999999987665543 2 12222 13433322 22333322
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
....|++|+|+|.
T Consensus 112 -~~~ldvLInNAGV 124 (314)
T KOG1208|consen 112 -EGPLDVLINNAGV 124 (314)
T ss_pred -CCCccEEEeCccc
Confidence 2458999999994
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.4e-05 Score=62.89 Aligned_cols=78 Identities=24% Similarity=0.344 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE--E--EeCCCCcHHHH----HHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--C--INYKTEDFVAR----VKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~----~~~~~~~~~~d 210 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.+..+...++.... . .|..+.+..+. +.+.. .++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAF--GRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCCC
Confidence 4789999999999999999999999999999999876544444332211 2 23333222222 22222 2489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.97 E-value=8.1e-05 Score=61.15 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHH-hC-CCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEE-TG-GKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~-~~-~~~~d~vi 213 (274)
+++++||+|++|++|..+++.+.+.|++|++++++. ....+.. .. .|..+.+..+.+.+. .. ...+|++|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 478999999999999999999999999999999876 1222221 11 233333222222221 11 12489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+++|.
T Consensus 82 ~~ag~ 86 (252)
T PRK08220 82 NAAGI 86 (252)
T ss_pred ECCCc
Confidence 99985
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.6e-05 Score=62.96 Aligned_cols=79 Identities=20% Similarity=0.192 Sum_probs=53.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCC--C-EE--EeCCCCcHHHHHHH-HhC-CCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VC--INYKTEDFVARVKE-ETG-GKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~--~-~~--~~~~~~~~~~~~~~-~~~-~~~~d~ 211 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.++++.+.+ +.. . .. .|..+.+....+.+ ... ...+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4789999999999999999999999999999999887765543 211 1 11 24333322222222 111 124899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999984
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.2e-05 Score=62.07 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~----~~~~~~~ 207 (274)
++++++|+|+++++|.++++.+.+.|++|++++|+++..+.+.+ .+.. ...|..+.+..+.+ .+.. .
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF--G 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc--C
Confidence 57899999999999999999999999999999998876654432 2322 12344333322222 2222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+++|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 48999999974
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=7.8e-05 Score=63.36 Aligned_cols=36 Identities=31% Similarity=0.351 Sum_probs=33.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.|++++|+|+++|+|.++++.+.+.|++|++++|+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 479999999999999999999999999999999873
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.3e-05 Score=61.81 Aligned_cols=78 Identities=22% Similarity=0.432 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-CCC-EE--EeCCCCcHHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GAD-VC--INYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g~~-~~--~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|++++.+.+. +. +.. .. .|..+.+....+.+.. ..+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4789999999999999999999999999999999987665433 21 222 12 2333333333333333 3499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.6e-05 Score=61.46 Aligned_cols=79 Identities=22% Similarity=0.363 Sum_probs=53.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHHHHh-C-CCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET-G-GKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~-~-~~~~d 210 (274)
|++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+... .+ |..+.+..+.+.+.. . -.++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 578999999999999999999999999999999887665443 222221 22 433333233322221 1 12489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999973
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.5e-05 Score=62.64 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE---EEeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV---CINYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
++++++|+|++|++|..+++.+.+.|++|++++|+.++++.+ ++.+... ..|..+.+..+.+.+.. . -.++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988765443 2334332 12333322222222221 1 1358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|.+|+++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999983
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=8.9e-05 Score=61.12 Aligned_cols=75 Identities=17% Similarity=0.266 Sum_probs=52.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+. +.+... . .|..+. +.+.+... .++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~-~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA---IDRAQAAE-WDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH---HHHHHHhc-CCCCEE
Confidence 468999999999999999999999999999999877655443 223221 1 233332 22333332 369999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 78 i~~ag~ 83 (257)
T PRK09291 78 LNNAGI 83 (257)
T ss_pred EECCCc
Confidence 999983
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.7e-05 Score=62.78 Aligned_cols=80 Identities=23% Similarity=0.292 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.++++||+|++|++|..+++.+.+.|++|++++|++++.+.+. +.+... . .|..+.+..+.+.+.. .-..+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999999987654432 223222 1 2443333222222211 11348
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=7.2e-05 Score=60.91 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=53.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCCEE-EeCCCCcHHHHHHH-HhCC-CCccEEEEC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTEDFVARVKE-ETGG-KGVDVILDC 215 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~~~~~~~~-~~~~-~~~d~vi~~ 215 (274)
++++||+|+++++|.++++.+.+.|++|++++|+++.. +.+++.+...+ .|..+.+..+.+.+ .... .++|++|+|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 47899999999999999999999999999999886543 44444453221 24333222222222 1111 248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 984
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=7.6e-05 Score=61.17 Aligned_cols=78 Identities=23% Similarity=0.339 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHHH----HHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVAR----VKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~----~~~~~~~~~~d 210 (274)
++++++|+|++|++|..+++.+.+.|++|++++|+++.++.+. +++.... .|..+.+.... +.+.. .++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF--GRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCCC
Confidence 4789999999999999999999999999999999877665543 4444322 23333222222 22222 2489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=8.7e-05 Score=61.22 Aligned_cols=81 Identities=20% Similarity=0.296 Sum_probs=54.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EE--EeCCCCcHHHHHHHHh--CCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VC--INYKTEDFVARVKEET--GGKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~~~~~~--~~~~ 208 (274)
..+++++|+|++|++|..+++.+.+.|++|+++.|++++++.+.+ .+.. .. .|..+.+....+.+.. ....
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 357999999999999999999999999999999999887655432 1221 22 2333322222221111 1135
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999984
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=8.4e-05 Score=62.06 Aligned_cols=81 Identities=19% Similarity=0.209 Sum_probs=52.6
Q ss_pred CCCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh---hhHHHHH-HcCCCEE--EeCCCCcHHHHHHHHh-C-CC
Q 024011 138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DLGADVC--INYKTEDFVARVKEET-G-GK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~---~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~-~-~~ 207 (274)
-.++++||+|++ ++||.++++.+.+.|++|+++.|++ ++++.+. +++.... .|..+.+..+.+.+.. . -.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 357899999996 7999999999999999999888764 3333332 3443222 3443333233332221 1 12
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 88 ~iD~lv~nAG~ 98 (272)
T PRK08159 88 KLDFVVHAIGF 98 (272)
T ss_pred CCcEEEECCcc
Confidence 48999999984
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=5.8e-05 Score=61.93 Aligned_cols=80 Identities=25% Similarity=0.295 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC--CCE-E--EeCCCCcHHHHHHHHh--CCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--ADV-C--INYKTEDFVARVKEET--GGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g--~~~-~--~~~~~~~~~~~~~~~~--~~~~~d 210 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. .+. ... . .|..+.+....+.+.. ...++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999999999999999999999988765543 222 111 1 2333322222222111 112489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
.||+++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=9.1e-05 Score=61.51 Aligned_cols=79 Identities=23% Similarity=0.252 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHH-hC-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEE-TG-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~-~~-~~~~ 209 (274)
++++++|+|++|++|..+++.+...|++|++++|++++++... +.+... . .|..+.+..+.+.+. .. -.++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5889999999999999999999999999999999887654332 223222 1 244333322222221 11 1358
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|++|+++|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99999987
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.7e-05 Score=60.05 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=53.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+++|+|+++++|.++++.+.+.|++|++++|++++++.+. +++...+ .|..+.+..+.+.+.... .+|++|+++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH-HLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh-cCcEEEECCC
Confidence 5899999999999999999999999999999988776553 3443322 344444333444333322 4899999976
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.8e-05 Score=64.91 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++... +.... .. .|..+ .+.+.+..+ ++|++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~~~v~~~l~--~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---EAALAELLE--KVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---HHHHHHHhC--CCCEEEE
Confidence 4789999999999999999999999999999998877654322 11111 12 23333 223444443 4999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 9884
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=60.66 Aligned_cols=79 Identities=23% Similarity=0.387 Sum_probs=52.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh-C-CCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVKEET-G-GKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~d 210 (274)
++++||+|++|++|..+++.+.+.|++|++++|++++.+.+ +..+.... .|..+.+..+.+.+.. . -.++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987765433 23333221 2333332222222211 1 12489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
+||+|+|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999974
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.4e-05 Score=61.23 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc----CCC---E-EEeCCCCcHHHHHHHH-hC-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD---V-CINYKTEDFVARVKEE-TG-GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~---~-~~~~~~~~~~~~~~~~-~~-~~ 207 (274)
.+++++|+|++|++|..++..+.+.|++|+++.|++++++.+. ++ +.. . ..|..+.+....+.+. .. -.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999887765442 22 221 1 2344443322222221 11 12
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
++|++|+|++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 4899999986
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00021 Score=60.32 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=51.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHH----HHHcCCCE-E--EeCCCCcHHHHH----HHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAV----CKDLGADV-C--INYKTEDFVARV----KEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~----~~~~g~~~-~--~~~~~~~~~~~~----~~~~~ 205 (274)
-+++++||+|+++++|..+++.+.+.|++|+++.++.+. .+. ++..+... . .|..+.+..+.+ .+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~- 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL- 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 347899999999999999999999999999999887532 222 22233322 1 233333222222 2222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 123 -~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 -GRLDILVNNAAF 134 (290)
T ss_pred -CCCCEEEECCcc
Confidence 248999999884
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0001 Score=60.29 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=54.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-E--EEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V--CINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|+|++|++|..+++.+...|++|++++|++++++.+.+.+.. . ..|..+.+..+.+.+.... ..|.+++++|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF-IPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc-CCCEEEEcCc
Confidence 5799999999999999999999999999999998887766543321 1 2344444433344333322 3688888886
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 81 ~ 81 (240)
T PRK06101 81 D 81 (240)
T ss_pred c
Confidence 3
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.1e-05 Score=62.29 Aligned_cols=78 Identities=23% Similarity=0.314 Sum_probs=54.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cC-CC-E--EEeCCCCcHHHHHHHHh-C--CCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-AD-V--CINYKTEDFVARVKEET-G--GKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~--~~~~~~~~~~~~~~~~~-~--~~~~d~v 212 (274)
+++||+|++|++|..+++.+.+.|++|++++|+.+.++.+.+ +. .. . ..|..+.+....+.+.. . ..++|+|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 579999999999999999999999999999999888766643 22 11 1 23444433333322211 1 2358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999985
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00011 Score=61.76 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh---------hhHHH----HHHcCCCEE---EeCCCCcH----H
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLAV----CKDLGADVC---INYKTEDF----V 197 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~---------~~~~~----~~~~g~~~~---~~~~~~~~----~ 197 (274)
-.+++++|+|++++||.++++.+.+.|++|++++++. ++++. +++.+.... .|..+.+. .
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3589999999999999999999999999999988764 33322 223333222 23333222 2
Q ss_pred HHHHHHhCCCCccEEEECCCh
Q 024011 198 ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+.. ..+|++|+|+|.
T Consensus 84 ~~~~~~~--g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETF--GGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhc--CCCCEEEECCCC
Confidence 2223333 349999999984
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=8.4e-05 Score=61.60 Aligned_cols=80 Identities=21% Similarity=0.308 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c--CCC-EE--EeCCCCcHHHHHHHHh-CCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VC--INYKTEDFVARVKEET-GGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~~~~~~~~~~-~~~~~d~ 211 (274)
++++++|+|++|++|..+++.+.+.|++|++++|++++++.+.+ + +.. .. .|..+.+..+.+.+.. ....+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 46889999999999999999999999999999999887665542 2 211 12 2333332222222211 1235899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999985
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=8.4e-05 Score=61.38 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---HcCCCE-E--EeCCCCcHHHHHHH-HhC-CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-C--INYKTEDFVARVKE-ETG-GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d 210 (274)
.|+++||+|++|++|..+++.+.+.|+++++++|+++..+..+ +.+... . .|..+.+..+.+.+ ... -.++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999998887653333 233321 2 23333222222221 111 12589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00012 Score=60.52 Aligned_cols=77 Identities=22% Similarity=0.290 Sum_probs=51.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCCcHHHHHHH-HhC-CCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFVARVKE-ETG-GKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~~~~~-~~~-~~~~d~vi 213 (274)
+++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+....+ |..+.+..+.+.+ ... -.++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999999999999999987764442 22322222 3333222222222 111 13589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99984
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.5e-05 Score=61.74 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH---HHHcCCCE---EEeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV---CKDLGADV---CINYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~---~~~~g~~~---~~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++...+. +...+.+. ..|..+.+... .+.+.. .+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF--GR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc--CC
Confidence 47899999999999999999999999999999987543222 22334332 13444322222 222222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999973
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00011 Score=60.82 Aligned_cols=78 Identities=22% Similarity=0.291 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.++++||+|++|++|..+++.+.+.|++|++++|++++.+.+ ++.+.... .|..+.+..+.+ .+.. .
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF--G 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc--C
Confidence 478999999999999999999999999999999988655433 33443322 233333322222 2222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 48999999984
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.6e-05 Score=63.48 Aligned_cols=77 Identities=21% Similarity=0.255 Sum_probs=53.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHH----HHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~----~~~~~~~~~ 208 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. +.+.... .|..+.+.... +.+.. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF--GD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence 578999999999999999999999999999999887654443 2232221 23333332222 22222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999999974
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=60.63 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HH----HHHHcCCCE-E--EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-C--INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~~-~--~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+++. ++ .++..+... . .|..+.+..+ .+.+..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-- 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL-- 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence 47899999999999999999999999999999987542 22 223334322 1 2333332222 222222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 348999999984
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.1e-05 Score=62.67 Aligned_cols=78 Identities=22% Similarity=0.339 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--C-EE--EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VC--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.+++++|+|+++++|.++++.+.+.|++|++++++++..+.+. ++.. . .. .|..+.+..+ .+.+.. .+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~--g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF--GT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh--CC
Confidence 4789999999999999999999999999999998876554433 2321 1 12 3444432222 222333 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 8999999974
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.5e-05 Score=62.11 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c--CCC-EE--EeCCCCcHHHHHHHHh-C-CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VC--INYKTEDFVARVKEET-G-GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~~~~~~~~~~-~-~~~~d 210 (274)
.+++++|+|++|++|..+++.+.+.|++|+++.|+.+..+...+ + +.. .. .|..+.+....+.+.. . -.++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999998876544332 2 222 12 2333333222222211 0 13589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.2e-05 Score=62.96 Aligned_cols=78 Identities=22% Similarity=0.381 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+... .+ |..+.+..+ .+.+..+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG-- 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence 4689999999999999999999999999999999877654433 233221 22 333322222 2222233
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+++|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 48999999983
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=60.70 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~----~~~~~~~~~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|++++++.+ ++.+... . .|..+.+.. +.+.+..+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-- 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG-- 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence 478999999999999999999999999999999998765433 2333322 1 233332222 22233332
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00019 Score=59.16 Aligned_cols=78 Identities=24% Similarity=0.285 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCE-E--EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADV-C--INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~--~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.|++++|+|++|++|..+++.+.+.|++|++++++.++.+.+ ++++... . .|..+.+.. +.+.+..+ .+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG--RLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence 478999999999999999999999999999999887665443 3344321 1 233332222 22222222 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999984
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.1e-05 Score=63.71 Aligned_cols=78 Identities=26% Similarity=0.356 Sum_probs=52.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHh--CCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEET--GGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~--~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+... +.. ...|..+.+..+.+.+.. .-..+|++|+|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 3578999999999999999999999999999999876553221 222 123444433222222211 11248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 984
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.2e-05 Score=63.96 Aligned_cols=80 Identities=19% Similarity=0.300 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHc--CCCE-E--EeCCCCcHHHHHHHHh-C-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDL--GADV-C--INYKTEDFVARVKEET-G-GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~--g~~~-~--~~~~~~~~~~~~~~~~-~-~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+ .+. +... . .|..+.+..+.+.+.. . -.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 578999999999999999999999999999999987765432 211 1111 2 2333333222222221 1 13
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 48999999984
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.4e-05 Score=60.89 Aligned_cols=75 Identities=25% Similarity=0.416 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|++|++|..+++.+.+.|+ +|++++|+.++.+. .+.. .. .|..+.+....+.+.. ..+|+||+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 468999999999999999999999999 99999998876553 2222 12 2333333333333333 24899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9986
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00059 Score=56.25 Aligned_cols=143 Identities=17% Similarity=0.278 Sum_probs=90.1
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHH
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~ 156 (274)
..+++|++++... +|.++.. +...++.+++++++..+. .+.... ....+.. ...+++++|-.|++ .|..+
T Consensus 65 ~p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLDiGcG--sG~l~ 134 (250)
T PRK00517 65 HPIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLDVGCG--SGILA 134 (250)
T ss_pred CCEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEEeCCc--HHHHH
Confidence 3467898887764 4666644 677889999888766543 211111 1222222 25678999999973 37666
Q ss_pred HHHHHHcCC-eEEEEecChhhHHHHHHc----CCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh----HHHhhhc
Q 024011 157 IQMGKCQGV-RVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNLGS 227 (274)
Q Consensus 157 ~~~~~~~g~-~v~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~~ 227 (274)
+.+ .+.|+ +|++++.++..++.+++. +....+.... +...+|+|+.+..... ++.+.+.
T Consensus 135 i~~-~~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~-----------~~~~fD~Vvani~~~~~~~l~~~~~~~ 202 (250)
T PRK00517 135 IAA-AKLGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ-----------GDLKADVIVANILANPLLELAPDLARL 202 (250)
T ss_pred HHH-HHcCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc-----------CCCCcCEEEEcCcHHHHHHHHHHHHHh
Confidence 654 44566 599999999888766532 2211111000 0114899998776532 4667788
Q ss_pred cccCCEEEEEecCC
Q 024011 228 LNIDGRLFIIGTQG 241 (274)
Q Consensus 228 l~~~g~~v~~g~~~ 241 (274)
|+++|++++.+...
T Consensus 203 LkpgG~lilsgi~~ 216 (250)
T PRK00517 203 LKPGGRLILSGILE 216 (250)
T ss_pred cCCCcEEEEEECcH
Confidence 99999999987654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=60.83 Aligned_cols=78 Identities=29% Similarity=0.413 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+.++++.+. ..+... . .|..+.+..+ .+.+.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~--~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF--G 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence 4789999999999999999999999999999999887765443 222221 2 2444333332 222222 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|.+|+++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=59.75 Aligned_cols=78 Identities=18% Similarity=0.274 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH----HHHcCCCEE-EeCCCCcHHHHHH----HHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVC-INYKTEDFVARVK----EETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~g~~~~-~~~~~~~~~~~~~----~~~~~~~~ 209 (274)
+++++||+|++|++|..+++.+.+.|++|++++|+.++... ++..+...+ .|..+....+.+. +.. .++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF--GRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh--CCc
Confidence 47899999999999999999999999999999997765432 222332222 3333322222222 222 258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||+++|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999999874
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00014 Score=59.94 Aligned_cols=80 Identities=19% Similarity=0.290 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. ..+... . .|..+.+..+.+.+.. . -.++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999999877654432 223222 2 2333333222222211 1 1248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00014 Score=60.03 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHHHHcCCCEE---EeCCCCcHH----HHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVC---INYKTEDFV----ARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~ 209 (274)
.|++++|+|+++++|.++++.+.+.|++|+.++++.. ..+.+++.+.... .|..+.+.. +.+.+..+ ++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG--HI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--CC
Confidence 4789999999999999999999999999998876532 2234444443221 233332222 22333332 48
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=56.31 Aligned_cols=78 Identities=24% Similarity=0.314 Sum_probs=50.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC--hhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHhC--CCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS--EEKLAVC----KDLGADVC---INYKTEDFVARVKEETG--GKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~--~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~~--~~~ 208 (274)
|+++|+|+++++|..+++.+.+.|. +|+++.|+ .++.+.+ +..+.... .|..+.+..+.+.+... ...
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5799999999999999999999966 77888888 4444333 33443222 23333322222222111 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999985
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00014 Score=60.00 Aligned_cols=80 Identities=19% Similarity=0.378 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVARVKEET-G-GKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~d~v 212 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. +++... . .|..+.+..+.+.+.. . -..+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3689999999999999999999999999999999988776554 333221 1 2333332222222211 1 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 999874
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00014 Score=59.68 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~~~----~~~~~~~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+++..+.+. +.+.. .. .|..+....+. +.+..+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG-- 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence 4689999999999999999999999999999999876554332 22222 12 23333222222 222222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||+++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=59.85 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=52.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----c--CCC-EE--EeCCCCcHHHHHHHHh-C-CCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GAD-VC--INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~--g~~-~~--~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+.+ . +.. .. .|..+.+..+.+.+.. . -.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999999887655432 1 211 12 2433332222222211 1 135
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 8999999973
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=9.8e-05 Score=61.07 Aligned_cols=80 Identities=20% Similarity=0.293 Sum_probs=52.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCh--hhHHHHH-HcCCC---EEEeCCCCcHHHHHHHH-hC-CCC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCK-DLGAD---VCINYKTEDFVARVKEE-TG-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~-~~-~~~ 208 (274)
.+++++|+|+ ++++|.++++.+.+.|++|++++|+. +.++.+. +++.. ...|..+.+..+.+.+. .. -.+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 79999999999999999999998753 3344433 33321 12344333322333221 11 135
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999999984
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=7.8e-05 Score=61.55 Aligned_cols=78 Identities=21% Similarity=0.337 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc--CCCE-E--EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL--GADV-C--INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~--g~~~-~--~~~~~~~~~~----~~~~~~~ 205 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+.+.++.+. .. +... . .|..+.+..+ .+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW- 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999887765443 12 2221 1 2333322222 222323
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 87 -g~id~li~~ag~ 98 (257)
T PRK09242 87 -DGLHILVNNAGG 98 (257)
T ss_pred -CCCCEEEECCCC
Confidence 348999999984
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00011 Score=60.67 Aligned_cols=78 Identities=24% Similarity=0.425 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
++++++|+|+++++|..+++.+.+.|++|++++|+++.++.+ ++.+... . .|..+.+... .+.... .
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH--G 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc--C
Confidence 589999999999999999999999999999999988765443 2333221 2 2433332222 222222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.+|+++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00015 Score=60.57 Aligned_cols=77 Identities=16% Similarity=0.279 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.+..+.+. +.+... . .|..+.+....+ .+.. .
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF--G 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--C
Confidence 4789999999999999999999999999999999877654432 223221 1 233333222222 2222 2
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
++|++|+|+|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 4899999998
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00019 Score=61.07 Aligned_cols=108 Identities=19% Similarity=0.315 Sum_probs=73.8
Q ss_pred CCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH-
Q 024011 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL- 177 (274)
Q Consensus 103 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~- 177 (274)
+.++++|+.+..+.++.. .+.+.++.++...... -++++++|.|+ |.+|..+++.++..|. +|++++|+.++.
T Consensus 139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 356777888887777644 4556666666433221 36899999997 9999999999998775 788999998876
Q ss_pred HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhH
Q 024011 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221 (274)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 221 (274)
+.+++++... .+. +.+.+... ..|+||.+++.+..
T Consensus 217 ~la~~~g~~~-~~~------~~~~~~l~--~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGNA-VPL------DELLELLN--EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCeE-EeH------HHHHHHHh--cCCEEEECCCCCch
Confidence 4556777632 221 11222222 38999999997543
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=9.6e-05 Score=60.85 Aligned_cols=74 Identities=26% Similarity=0.335 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHH----HHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARV----KEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~----~~~~~~~~~d~ 211 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++ ...+.. .. .|..+.+..+.+ .+.. ..+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERH--GRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 47999999999999999999999999999999988754 111211 12 233332222222 2222 24899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999984
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00012 Score=62.45 Aligned_cols=79 Identities=19% Similarity=0.304 Sum_probs=53.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
+++++|+|+++++|.++++.+.+.| ++|++++|++++.+.+. ++. .. .. .|..+.+..+.+.+.. . ..++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6799999999999999999999999 99999999888765443 332 11 11 3444333233232221 1 1359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999984
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00012 Score=60.55 Aligned_cols=80 Identities=21% Similarity=0.293 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHH----HHHHcCCCE---EEeCCCCcHHHHHHHHhC--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLA----VCKDLGADV---CINYKTEDFVARVKEETG--GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~----~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~ 208 (274)
.+++++|+|++|++|..+++.+.+.|++ |++++|+.+..+ .+++.+... ..|..+.+....+.+... -.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999998 999998876554 233344332 124443332222222210 124
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 8999999984
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00025 Score=57.88 Aligned_cols=81 Identities=22% Similarity=0.230 Sum_probs=54.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHH-hC-CCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEE-TG-GKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~-~~-~~~ 208 (274)
..+++++|+|++|++|..+++.+.+.|++|++++|++++.+.+. +.+... . .|..+.+....+.+. .. -.+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999999999999887665443 223222 2 233332222222221 11 124
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999984
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0002 Score=58.40 Aligned_cols=79 Identities=25% Similarity=0.456 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-C---EEEeCCC---Cc---HHHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-D---VCINYKT---ED---FVARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~---~~~~~~~---~~---~~~~~~~~~ 204 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|++++.+.+. +.+. . ...|..+ .+ +.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999988765442 2221 1 1123221 11 222333333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
. ..+|.+|+++|.
T Consensus 85 ~-~~id~vi~~ag~ 97 (239)
T PRK08703 85 Q-GKLDGIVHCAGY 97 (239)
T ss_pred C-CCCCEEEEeccc
Confidence 1 258999999984
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00013 Score=59.89 Aligned_cols=78 Identities=23% Similarity=0.378 Sum_probs=53.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE-E--EeCCCCcHHHHHHHHh-C-CCCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-C--INYKTEDFVARVKEET-G-GKGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~d~vi~ 214 (274)
++++|+|++|++|.++++.+.+.|++|++++|++++++.+.+ ++... . .|..+.+..+.+.+.. . ..++|++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 368999999999999999999999999999999887766543 33322 1 2333332222222211 1 135999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 81 ~ag~ 84 (248)
T PRK10538 81 NAGL 84 (248)
T ss_pred CCCc
Confidence 9874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0002 Score=59.83 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=53.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-CCCE---EEeCCCCcHHHHH-HHHh-CCCCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADV---CINYKTEDFVARV-KEET-GGKGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~~---~~~~~~~~~~~~~-~~~~-~~~~~d~vi~ 214 (274)
+++||+|++|++|..+++.+.+.|++|+++.|++++++.+++. +... ..|..+.+....+ .+.. ...++|+||+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6799999999999999999999999999999998877766542 2221 1233333222222 2111 1135899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9984
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=59.54 Aligned_cols=77 Identities=18% Similarity=0.316 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|+++.++ ++.+.+ .+.+... . .|..+.+..+ .+.+.. .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF--G 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc--C
Confidence 57999999999999999999999999999999887 333222 2333322 1 2433332222 222222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00019 Score=59.40 Aligned_cols=78 Identities=21% Similarity=0.303 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---HcCCCE-E--EeCCCCcHHHHH----HHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-C--INYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~~~~~----~~~~~~~~ 208 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+++..+..+ +.+... . .|..+.+..+.+ .+.. ..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE--GR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence 4789999999999999999999999999999998875333222 223222 1 233332222222 2222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999999984
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00021 Score=59.62 Aligned_cols=77 Identities=21% Similarity=0.281 Sum_probs=53.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-CCC-EE--EeCCCCcHHHH----HHHHhCCCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GAD-VC--INYKTEDFVAR----VKEETGGKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~-~~--~~~~~~~~~~~----~~~~~~~~~~d~ 211 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.+.++.+.+. +.. .. .|..+.+..+. +.+.. .++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF--GRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 57899999999999999999999999999999998877665432 222 12 23333222222 22222 25899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999984
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00016 Score=59.56 Aligned_cols=80 Identities=25% Similarity=0.296 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh-C-CCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVC-INYKTEDFVARVKEET-G-GKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~-~-~~~~d~vi~ 214 (274)
.+++++|+|+++++|.++++.+.+.|++|+++.++. +..+.+++.+...+ .|..+.+..+.+.+.. . -.++|++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999999999999999998876543 34444544332222 3444433222222211 1 124899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9974
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00032 Score=57.88 Aligned_cols=77 Identities=26% Similarity=0.270 Sum_probs=52.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCC--CEEE--eCCCCcHHHH----HHHHhCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGA--DVCI--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~--~~~~--~~~~~~~~~~----~~~~~~~ 206 (274)
++++||+|+++++|.++++.+.+.|++|++++|+.++.+.+. . .+. ...+ |..+.+.... +.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-- 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-- 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc--
Confidence 578999999999999999999999999999999877654432 1 121 1122 3333222222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 248999999973
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00015 Score=60.47 Aligned_cols=78 Identities=24% Similarity=0.425 Sum_probs=52.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-------HH----HHHHcCCCEE---EeCCCCcHHH----HH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-------LA----VCKDLGADVC---INYKTEDFVA----RV 200 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-------~~----~~~~~g~~~~---~~~~~~~~~~----~~ 200 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+.+. ++ .+++.+.... .|..+.+... .+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999987542 21 2223333222 3433332222 22
Q ss_pred HHHhCCCCccEEEECCCh
Q 024011 201 KEETGGKGVDVILDCMGA 218 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~~g~ 218 (274)
.+..+ .+|++|+++|.
T Consensus 85 ~~~~g--~id~li~~ag~ 100 (273)
T PRK08278 85 VERFG--GIDICVNNASA 100 (273)
T ss_pred HHHhC--CCCEEEECCCC
Confidence 22222 49999999984
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00062 Score=60.44 Aligned_cols=92 Identities=18% Similarity=0.191 Sum_probs=69.5
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|.... ++ +++ . ...|+|+.+.
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~l-eel---l--~~ADIVI~at 317 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------TL-EDV---V--ETADIFVTAT 317 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------cH-HHH---H--hcCCEEEECC
Confidence 346999999996 899999999999999999999887776544444554321 11 222 2 2389999999
Q ss_pred Chhh-H-HHhhhccccCCEEEEEecCC
Q 024011 217 GASY-F-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 217 g~~~-~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
|... + ...++.|++++.++.+|...
T Consensus 318 Gt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 318 GNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred CcccccCHHHHhccCCCcEEEEcCCCc
Confidence 8744 3 47889999999999998763
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00022 Score=59.23 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHH----HHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~----~~~~~~ 207 (274)
.+++++|+|+++++|..++..+...|++|+++.+++++++.+. +.+.... .|..+....+.+. +.. .
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV--G 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC--C
Confidence 5789999999999999999999999999999999887664432 3343322 3443333222222 222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00021 Score=59.47 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=52.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh--CCCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVKEET--GGKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~d~ 211 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.++++.+ +..+.+.. .|..+.+..+.+.+.. ...++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999999999988776543 23333322 2333322222222211 1135999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999984
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00014 Score=59.08 Aligned_cols=80 Identities=28% Similarity=0.399 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC---CCEEE--eCCCCcHHHH-HHHHhC-CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTEDFVAR-VKEETG-GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~~~~~~-~~~~~~-~~~~d 210 (274)
.+++++|+|++|++|..+++.+...|++|++++|++++.+.+. ++. ....+ |..+.+.... +.+... ..++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999887665443 332 11222 3333222222 222111 12589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00019 Score=58.79 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=52.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH----HHHcCCCE-EE--eCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADV-CI--NYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~g~~~-~~--~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+. +.+.+... .+ |..+.+..+.+ .+..+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG-- 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence 46899999999999999999999999999999998665433 22333222 12 33332222222 22222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.||+++|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 48999999864
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00022 Score=60.58 Aligned_cols=80 Identities=18% Similarity=0.269 Sum_probs=51.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhH----HHHHHcCCCEE-E--eCCCCcHHHHHHHH-hCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADVC-I--NYKTEDFVARVKEE-TGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~----~~~~~~g~~~~-~--~~~~~~~~~~~~~~-~~~~~~ 209 (274)
.|++++|+|+++++|.++++.+.+.|++|++.+++. +.. +.++..+.... + |..+.+..+.+.+. ..-.++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999988653 222 22333343322 2 33332222222221 111359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0004 Score=54.70 Aligned_cols=113 Identities=22% Similarity=0.193 Sum_probs=76.5
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEEEeCCC
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKT 193 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~ 193 (274)
-++..+...|.. .+...+++|++||-+|+ |.|+.++-+++..+ +|+.+.+.++-.+.+ +.+|...+.....
T Consensus 53 qtis~P~~vA~m--~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g 127 (209)
T COG2518 53 QTISAPHMVARM--LQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG 127 (209)
T ss_pred ceecCcHHHHHH--HHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC
Confidence 344455555543 36678999999999996 56999998888877 999999887754444 4577643322111
Q ss_pred CcHHHHHHHHhCCCCccEEEECCChhhH-HHhhhccccCCEEEEEec
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~ 239 (274)
+.. .-+.....||.++-+++.+.. ...++.|+++|+++.--.
T Consensus 128 DG~----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 128 DGS----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred Ccc----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 111 112223569999988887654 667899999999987643
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00026 Score=57.73 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHH----HHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~----~~~~~~ 207 (274)
+++++||+|++|++|..+++.+.+.|.+|+++.|++++.+.. ++.+.... .|..+.+....+. +.. .
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF--G 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence 357899999999999999999999999999999988765433 23343322 2333322222222 222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.+|+++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 48999999875
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=5.4e-05 Score=69.86 Aligned_cols=78 Identities=22% Similarity=0.335 Sum_probs=57.8
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC---------------------hhhHHHHHHcCCCEEEeCCC-
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------------------EEKLAVCKDLGADVCINYKT- 193 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~---------------------~~~~~~~~~~g~~~~~~~~~- 193 (274)
..++|++|+|.|+ |.+|+++++.+++.|++|+++++. +.+++.++++|.+..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3678999999997 999999999999999999998853 33556677889877665433
Q ss_pred CcH-HHHHHHHhCCCCccEEEECCChh
Q 024011 194 EDF-VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 194 ~~~-~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.+. .+.+. .++|.||.++|..
T Consensus 212 ~~~~~~~~~-----~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 EDITLEQLE-----GEFDAVFVAIGAQ 233 (564)
T ss_pred CcCCHHHHH-----hhCCEEEEeeCCC
Confidence 221 22221 2489999999964
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00017 Score=67.86 Aligned_cols=114 Identities=20% Similarity=0.284 Sum_probs=71.2
Q ss_pred eeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
...|..+++...+.+ +.++.+++-.-..+ ....-.++++||+|++|++|.++++.+.+.|++|++++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 456677777777777 66666665321110 0112247999999999999999999999999999999998
Q ss_pred hhhHHHHH-H----cCCC--EE--EeCCCCcHHHHHHHHh--CCCCccEEEECCCh
Q 024011 174 EEKLAVCK-D----LGAD--VC--INYKTEDFVARVKEET--GGKGVDVILDCMGA 218 (274)
Q Consensus 174 ~~~~~~~~-~----~g~~--~~--~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g~ 218 (274)
.+.++.+. + .+.. .. .|..+.+....+.+.. .-.++|++|+|+|.
T Consensus 448 ~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 448 LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 87665442 1 2221 11 2333332222222211 11359999999984
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00075 Score=58.51 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=68.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcC---C-CEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---A-DVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
+++||.|+ |++|+.+++.|.+.+ .+|++.+|+.++++.+.... . ...+|..+. +.+.+...+ +|+||++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~---~al~~li~~--~d~VIn~ 75 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV---DALVALIKD--FDLVINA 75 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh---HHHHHHHhc--CCEEEEe
Confidence 57899998 999999999999998 79999999999988886553 1 223444443 233444433 6999999
Q ss_pred CChhhHHHhh-hccccCCEEEEEecCCCC
Q 024011 216 MGASYFQRNL-GSLNIDGRLFIIGTQGGA 243 (274)
Q Consensus 216 ~g~~~~~~~~-~~l~~~g~~v~~g~~~~~ 243 (274)
+....-..++ .+++.+-.++++......
T Consensus 76 ~p~~~~~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 76 APPFVDLTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred CCchhhHHHHHHHHHhCCCEEEcccCCch
Confidence 9876544444 456666677777665533
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=8.9e-05 Score=61.28 Aligned_cols=73 Identities=32% Similarity=0.418 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHH----HHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVA----RVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~----~~~~~~~~~~~d~ 211 (274)
.|++++|+|+++++|..+++.+.+.|++|++++|+++.. .... .. .|..+.+..+ .+.+.. .++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERL--GGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 478999999999999999999999999999999886532 1111 11 2333333222 222332 34899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK06523 81 LVHVLGG 87 (260)
T ss_pred EEECCcc
Confidence 9999983
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00022 Score=59.54 Aligned_cols=80 Identities=28% Similarity=0.414 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H---cC--CC-EEE--eCCCCcHHHHHHH-HhC-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LG--AD-VCI--NYKTEDFVARVKE-ETG-GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g--~~-~~~--~~~~~~~~~~~~~-~~~-~~ 207 (274)
++++++|+|++|++|..+++.+.+.|++|++++|+.++.+... + .+ .. ..+ |..+.+..+.+.+ ... ..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999877654332 2 21 11 122 3333322222222 111 12
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 48999999973
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0003 Score=57.47 Aligned_cols=78 Identities=31% Similarity=0.442 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHHHH----HHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVARV----KEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~~~----~~~~~~~~~d 210 (274)
++++++|+|++|++|..+++.+.+.|++|++..++.++++.+. .++... . .|..+.+..+.+ .+.. .++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADL--EGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc--CCCC
Confidence 4789999999999999999999999999999888877766553 333222 2 233332222222 2222 3489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
.+|+|+|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00028 Score=58.27 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=51.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHH----HHHcCCCEE---EeCCCCcH----HHHHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAV----CKDLGADVC---INYKTEDF----VARVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~----~~~~g~~~~---~~~~~~~~----~~~~~~~~~~~ 207 (274)
+++++|+|+++++|..+++.+.+.|++|+++.+ +.+..+. ++..+.... .|..+.+. .+++.+..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG-- 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 578999999999999999999999999988865 3333332 233443322 24333322 223333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00028 Score=58.51 Aligned_cols=78 Identities=15% Similarity=0.317 Sum_probs=51.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecC---hhhHHHHH-HcCCCEE--EeCCCCcHHHHH----HHHhCC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS---EEKLAVCK-DLGADVC--INYKTEDFVARV----KEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~---~~~~~~~~-~~g~~~~--~~~~~~~~~~~~----~~~~~~ 206 (274)
.+++++|+|+ ++++|.++++.+.+.|++|+++.+. +++++.+. +++.... .|..+.+..+.+ .+..
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-- 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW-- 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh--
Confidence 4789999996 5799999999999999999987643 33443332 3443222 344433323322 2223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 359999999984
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00015 Score=59.78 Aligned_cols=80 Identities=23% Similarity=0.311 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. +.+... . .|..+.+....+.+.. ...++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999988765442 223322 1 2443333222222211 11258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999974
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0002 Score=58.79 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=51.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC--EE--EeCCCCcHHHH----HHHHhCCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VC--INYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~--~~~~~~~~~~~----~~~~~~~~~ 208 (274)
++++|+|+++|+|.++++.+. .|++|++++|++++++.+. +.+.. .. .|..+.+..+. +.+.. .+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA--GE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc--CC
Confidence 468999999999999999887 4999999999988775542 33432 22 24444333332 23322 34
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 78 id~lv~nag~ 87 (246)
T PRK05599 78 ISLAVVAFGI 87 (246)
T ss_pred CCEEEEecCc
Confidence 8999999985
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00035 Score=57.60 Aligned_cols=79 Identities=25% Similarity=0.266 Sum_probs=52.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--CEE--EeCCCCcHHHH-HHHHhC-CCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC--INYKTEDFVAR-VKEETG-GKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~~~--~~~~~~~~~~~-~~~~~~-~~~~d~v 212 (274)
+++++|+|++|++|..++..+.+.|++|++++|+.++.+.+. ++.. -.. .|..+.+.... +.+... -.++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578999999999999999999999999999999888765543 2221 112 23333222221 111111 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999984
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00048 Score=57.58 Aligned_cols=77 Identities=22% Similarity=0.309 Sum_probs=51.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHhC-CCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEETG-GKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~~-~~~~d~ 211 (274)
+++++|+|+ |++|.++++.+. .|++|++++|++++++.+. +.+... . .|..+.+..+.+.+... -.++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 468999998 799999999986 7999999999877654432 233222 1 34444333333333221 135899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999984
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00011 Score=60.84 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HH-cCCC-EE--EeCCCCcHHHHHHHHhC--CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KD-LGAD-VC--INYKTEDFVARVKEETG--GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~-~g~~-~~--~~~~~~~~~~~~~~~~~--~~ 207 (274)
++++++|+|+++++|.++++.+.+.|++|+++.+ ++++++.+ +. .+.. .. .|..+.+..+.+.+... -.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999988865 44444332 11 2322 22 24433332222222211 12
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
.+|++|+|+|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 4899999996
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00046 Score=58.97 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=62.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+|+|+||+|-+|..+++.+...|++|.+.+|+.++...+...+...+. |..+. +.+.+... ++|+||++++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~---~~l~~al~--g~d~Vi~~~~~~~ 76 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP---ETLPPSFK--GVTAIIDASTSRP 76 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH---HHHHHHHC--CCCEEEECCCCCC
Confidence 699999999999999999999999999999987766555444543332 32322 23334343 4899999876311
Q ss_pred -------------HHHhhhccccCC--EEEEEecC
Q 024011 221 -------------FQRNLGSLNIDG--RLFIIGTQ 240 (274)
Q Consensus 221 -------------~~~~~~~l~~~g--~~v~~g~~ 240 (274)
....++.++..| +++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 77 SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 123344444433 88887764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00039 Score=56.67 Aligned_cols=80 Identities=24% Similarity=0.330 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE-E--eCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+ +..+.... + |..+.+....+.+.. .-.++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 368899999999999999999999999999999987765443 22232221 2 332322222222211 11358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00037 Score=57.42 Aligned_cols=78 Identities=18% Similarity=0.288 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~----~~~~~~~~ 207 (274)
.+++++|+|+++++|..+++.+.+.|+++++++++.+..+.+. ..+... . .|..+.+.... +.+.. .
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL--G 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence 4799999999999999999999999999999998877654432 233322 2 23333322222 22222 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 48999999984
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00038 Score=57.04 Aligned_cols=80 Identities=21% Similarity=0.246 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHHHH-hC-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEE-TG-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~-~~-~~~~ 209 (274)
+++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+. +.+... .+ |..+.+..+.+.+. .. -.++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999887655443 223222 22 33332222222221 11 1248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999983
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00031 Score=57.40 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=51.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-C-EEE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-D-VCI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~-~~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
++++|+|++|++|..+++.+.+.|++|++++|++++.+... ..+. . ..+ |..+.+..+.+.+... ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 58999999999999999999999999999999987664432 1111 1 122 3333333333333222 237999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
++++|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 999874
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00059 Score=57.05 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC--C-EE--EeCCCCcHHHHHHHHhC-CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--D-VC--INYKTEDFVARVKEETG-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~-~~--~~~~~~~~~~~~~~~~~-~~~ 208 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+. ..+. . .. .|..+.+..+.+.+... -.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3678999999999999999999999999999999887664443 2221 1 12 24333322222222211 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0007 Score=53.57 Aligned_cols=64 Identities=23% Similarity=0.314 Sum_probs=47.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|+|+++++|..+++.+.+. ++|++++|+.. ....|..+.+..+.+.+..+ ++|++|+++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~--~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPASIRALFEKVG--KVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcC--CCCEEEECCCC
Confidence 6899999999999999998888 99999998753 22345554444444444332 59999999984
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=57.70 Aligned_cols=78 Identities=29% Similarity=0.333 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhH----HHHHHcCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL----AVCKDLGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~----~~~~~~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+++++|..+++.+.+.|+++++..+ +..+. +.+++.+.... .|..+.+..+ ++.+..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-- 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh--
Confidence 4689999999999999999999999999888543 33322 22333444332 2333322222 222223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 358999999984
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00045 Score=56.63 Aligned_cols=78 Identities=24% Similarity=0.282 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEE-EecChhhHHHH----HHcCCCEE---EeCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAGSEEKLAVC----KDLGADVC---INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~-~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~----~~~~~~~ 206 (274)
++++++|+|++|++|..+++.+.+.|++|++ ..|+.++.+.+ ++.+.... .|..+.+.... +.+..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-- 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence 4689999999999999999999999999876 46666554332 33343222 23333322222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 248999999984
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00051 Score=56.79 Aligned_cols=118 Identities=25% Similarity=0.394 Sum_probs=78.9
Q ss_pred CCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC
Q 024011 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA 185 (274)
Q Consensus 110 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~ 185 (274)
+++++++|. ..+...+.+..++++|+++|=+|+ |-|.++..++++.|++|+.++.|+++.+.++ +.|.
T Consensus 49 ~~~tL~eAQ------~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl 120 (283)
T COG2230 49 PDMTLEEAQ------RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGL 120 (283)
T ss_pred CCCChHHHH------HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCC
Confidence 344555553 455555668889999999999996 7899999999999999999999999887665 3454
Q ss_pred CEEEeCCCCcHHHHHHHHhCCCCccEEEE-----CCCh----hhHHHhhhccccCCEEEEEecCC
Q 024011 186 DVCINYKTEDFVARVKEETGGKGVDVILD-----CMGA----SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~-----~~g~----~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..-+...-.++ ++..+ .||-|+. ..|. ..+..+.+.|+++|++++-....
T Consensus 121 ~~~v~v~l~d~----rd~~e--~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 121 EDNVEVRLQDY----RDFEE--PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred CcccEEEeccc----ccccc--ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 31111111111 11121 2776643 3333 23677888999999999876554
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00031 Score=56.97 Aligned_cols=75 Identities=21% Similarity=0.228 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHH-HHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVAR-VKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~~~~~~~~d~vi~~~ 216 (274)
.+++++|+|++|++|..+++.+.+.|++|+++.|+.+. ..... ...|..+.+..+. +.+.....++|++|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 36889999999999999999999999999999988664 11111 1234433332222 22222233589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 84
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=6.3e-05 Score=62.44 Aligned_cols=75 Identities=23% Similarity=0.262 Sum_probs=51.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHH----HHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARV----KEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~----~~~~~~~~~d~vi 213 (274)
.+++++|+|++|++|.++++.+.+.|++|+++++++++.+. .... ...|..+.+..+.+ .+..+ .+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence 47899999999999999999999999999999987765421 1111 11243333222222 22222 489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 99984
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0018 Score=51.24 Aligned_cols=77 Identities=25% Similarity=0.335 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c----CCCEE-EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC-INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~----g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.+++++|+|++|++|..+++.+...|++|+++.|+.++.+.+.+ + +.... .+..+ .+.+.+... +.|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~--~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAAAIK--GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHHHHh--cCCEE
Confidence 57899999999999999999999999999999999887765532 2 22211 12222 122233332 48999
Q ss_pred EECCChhh
Q 024011 213 LDCMGASY 220 (274)
Q Consensus 213 i~~~g~~~ 220 (274)
|++.....
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99876543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00085 Score=54.97 Aligned_cols=80 Identities=25% Similarity=0.368 Sum_probs=54.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCC--EE--EeCCC---CcH---HHHHHH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD--VC--INYKT---EDF---VARVKE 202 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~--~~--~~~~~---~~~---~~~~~~ 202 (274)
..++++++|+|++|++|..+++.+.+.|++|++++|+.+..+.+ ++.+.. .+ .|.+. .+. .+.+.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999988765333 233322 12 23321 111 222333
Q ss_pred HhCCCCccEEEECCCh
Q 024011 203 ETGGKGVDVILDCMGA 218 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~ 218 (274)
.. ..+|+||+++|.
T Consensus 89 ~~--~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QF--GRLDGVLHNAGL 102 (247)
T ss_pred Hh--CCCCEEEECCcc
Confidence 22 248999999874
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00027 Score=59.03 Aligned_cols=101 Identities=23% Similarity=0.305 Sum_probs=66.6
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
..+++|++||..|+ |. |..+.++++..|. +|++++.+++.++.+++ .+...+. ....++ +.+ ......
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~-~~l--~~~~~~ 146 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEI-EAL--PVADNS 146 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcch-hhC--CCCCCc
Confidence 56789999999997 44 7777777776664 69999999998887764 3332221 111111 111 112346
Q ss_pred ccEEEECCC-----h--hhHHHhhhccccCCEEEEEecCC
Q 024011 209 VDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 209 ~d~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+|+|+.+.. . ..+..+.+.|+++|++++.+...
T Consensus 147 fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~ 186 (272)
T PRK11873 147 VDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVL 186 (272)
T ss_pred eeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 999986542 1 34778899999999999876543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00067 Score=55.87 Aligned_cols=100 Identities=11% Similarity=0.130 Sum_probs=63.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC--CCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g--~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++++++|+|++|.+|..+++.+...|++|++..|+.++.......+ ...+ .|..+. .+.+.+... .++|+||.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~l~~~~~-~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--SDKLVEAIG-DDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--HHHHHHHhh-cCCCEEEEC
Confidence 3689999999999999999999999999999999887654332211 2211 233321 123333331 258999999
Q ss_pred CChhh--------------HHHhhhcccc--CCEEEEEecCC
Q 024011 216 MGASY--------------FQRNLGSLNI--DGRLFIIGTQG 241 (274)
Q Consensus 216 ~g~~~--------------~~~~~~~l~~--~g~~v~~g~~~ 241 (274)
+|... ...+++.+.. .++++.++...
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 87421 1233444433 36888887653
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00073 Score=56.41 Aligned_cols=80 Identities=23% Similarity=0.233 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
..++++|+|++|++|..+++.+...|++|+++.|+.+..+... ..+.... .|..+.+..+.+.+.. .-.++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4579999999999999999999999999999998876654332 2333322 2333332222222211 01248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00049 Score=55.88 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=49.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+..... ... ..+..+..+..+.+.+..+ ++|++|+++|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~ag 76 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----SGNFHFLQLDLSDDLEPLFDWVP--SVDILCNTAG 76 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----CCcEEEEECChHHHHHHHHHhhC--CCCEEEECCC
Confidence 4689999999999999999999999999999988754321 111 1222222222344444333 4899999998
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0012 Score=53.24 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=51.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEE--eCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCI--NYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.++++|+|++|++|..++..+.+. ++|++++|+.++.+.+.+ ......+ |..+.+....+.+.. .++|.+|+++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 368999999999999999988888 999999999877655543 2222223 333322222222222 2599999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 84
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00091 Score=54.92 Aligned_cols=77 Identities=27% Similarity=0.379 Sum_probs=52.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCCcHHH----HHHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
++++||+|++|++|..++..+.+.|++|++++|+.+..+.+.+ .+... . .|..+.+..+ .+.+.. .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF--GG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc--CC
Confidence 4689999999999999999999999999999998876655432 23222 1 2333322222 222222 34
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||.+++.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0005 Score=52.69 Aligned_cols=94 Identities=19% Similarity=0.314 Sum_probs=62.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh--
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-- 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-- 219 (274)
++.|+||+|-+|..+.+-+..+|..|++++|+++++...+.. .++..+--+.. .+.+.. .|+|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd~~-~~a~~l--~g~DaVIsA~~~~~~ 75 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFDLT-SLASDL--AGHDAVISAFGAGAS 75 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccChh-hhHhhh--cCCceEEEeccCCCC
Confidence 578999999999999999999999999999999987554221 12222211111 122222 3599999988753
Q ss_pred h--------HHHhhhccccC--CEEEEEecCC
Q 024011 220 Y--------FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 220 ~--------~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
. .+..++.++.- -|++.+|..+
T Consensus 76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 76 DNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 1 22345556553 4888887765
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0006 Score=59.04 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHc--CCCE-EE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL--GADV-CI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--g~~~-~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.|+++||+|++|.+|..+++.+.+.|++|++++|+....... ..+ +... .+ |..+. +.+.+.....++|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA---AKLRKAIAEFKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH---HHHHHHHhhcCCCEE
Confidence 368999999999999999999999999999999876643222 112 1111 12 33322 233333333358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 80 ih~A~~ 85 (349)
T TIGR02622 80 FHLAAQ 85 (349)
T ss_pred EECCcc
Confidence 999973
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00064 Score=55.86 Aligned_cols=78 Identities=24% Similarity=0.303 Sum_probs=51.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHHHHHHH-HhC-CCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVARVKE-ETG-GKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d~ 211 (274)
++++|+|++|++|..+++.+.+.|++|+++.+++++++.+ +..+... . .|..+.+....+.+ ... -..+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999999999999987665433 2333222 1 23333332222222 111 124899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999984
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00084 Score=54.76 Aligned_cols=80 Identities=28% Similarity=0.391 Sum_probs=50.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HH----HHHHcCCCEE-E--eCCCCcHHHHHHHH-hC-CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADVC-I--NYKTEDFVARVKEE-TG-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~~~-~--~~~~~~~~~~~~~~-~~-~~~ 208 (274)
.+++++|+|++|++|..+++.+.+.|++|+++.++... .+ .++..+.... + |..+.+....+.+. .. -.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999887776542 22 2222333222 2 33333322222221 11 124
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|.||.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999974
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00084 Score=55.53 Aligned_cols=78 Identities=22% Similarity=0.305 Sum_probs=51.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHH----HHHHcCCCE---EEeCCCCcHHHHH----HHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADV---CINYKTEDFVARV----KEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~----~~~~~g~~~---~~~~~~~~~~~~~----~~~~~~ 206 (274)
.+++++|+|+++++|..+++.+.+.|++++++.++.+ ..+ .++..+... ..|..+.+....+ .+..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-- 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF-- 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--
Confidence 5789999999999999999999999999998887543 222 222333322 1244433322222 2222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 248999999984
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00083 Score=55.22 Aligned_cols=80 Identities=24% Similarity=0.334 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH-H---cCCCE-EE--eCCCCcHHH----HHHHHh--
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK-D---LGADV-CI--NYKTEDFVA----RVKEET-- 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~-~---~g~~~-~~--~~~~~~~~~----~~~~~~-- 204 (274)
.+++++|+|++|++|..+++.+.+.|++|++. .|++++.+... + .+... .+ |..+.+... .+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 36899999999999999999999999998775 57666543332 2 22221 22 333322222 222222
Q ss_pred --CCCCccEEEECCCh
Q 024011 205 --GGKGVDVILDCMGA 218 (274)
Q Consensus 205 --~~~~~d~vi~~~g~ 218 (274)
+..++|++|+++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 11358999999984
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00063 Score=62.87 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+.++||+|++|++|.++++.+...|++|++++|+.++++.+. +.+... . .|..+.+..+.+.+.. ....+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999987765443 334322 1 2444433333332221 11248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999985
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00089 Score=54.80 Aligned_cols=78 Identities=23% Similarity=0.351 Sum_probs=49.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~~~----~~~~~~~~~ 206 (274)
++++++|+|++|++|..+++.+.+.|++|+++.+ +++..+.. ++.+.... + |..+.+.. +.+.+..+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG- 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999987654 34443332 23333222 2 33332222 22222222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.+|.+|+++|.
T Consensus 84 -~id~vi~~ag~ 94 (247)
T PRK12935 84 -KVDILVNNAGI 94 (247)
T ss_pred -CCCEEEECCCC
Confidence 48999999985
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00099 Score=55.00 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh-C-CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADVC---INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
.+++++|+|+++++|..+++.+.+.|++++++.++ .+..+.+ +..+.... .|..+.+....+.+.. . -.+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999887654 3333322 22343221 2433332222222211 1 125
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999984
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00072 Score=55.20 Aligned_cols=77 Identities=25% Similarity=0.422 Sum_probs=51.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHH----HHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~----~~~~~~ 207 (274)
++++||+|++|++|..++..+.+.|++++++ .|+.++.+.+. ..+... .. |..+.+....+. +..+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG-- 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence 5789999999999999999999999999998 88877654332 222222 22 333322222222 2222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||.++|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 49999999974
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0015 Score=56.63 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=51.5
Q ss_pred CCCCEEEEecCCchHHHH--HHHHHHHcCCeEEEEecChh--h--------------HHHHHHcCCCE-EE--eCCCCcH
Q 024011 138 SPGESFLVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEE--K--------------LAVCKDLGADV-CI--NYKTEDF 196 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~--~~~~~~~~g~~v~~~~~~~~--~--------------~~~~~~~g~~~-~~--~~~~~~~ 196 (274)
..++++||+|+++++|.+ +++.+ ..|++++++.+..+ + .+.+++.|... .+ |..+.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456999999999999999 77888 89999888874221 1 22344556432 23 3333322
Q ss_pred ----HHHHHHHhCCCCccEEEECCChh
Q 024011 197 ----VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 197 ----~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.+.+.+.++ ++|+++++++..
T Consensus 118 v~~lie~I~e~~G--~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLG--QVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcC--CCCEEEECCccC
Confidence 333444443 499999999864
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0013 Score=54.03 Aligned_cols=77 Identities=18% Similarity=0.302 Sum_probs=50.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hH----HHHHHcCCC-EE--EeCCCCcHHH----HHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KL----AVCKDLGAD-VC--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~----~~~~~~g~~-~~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++|+|++|++|..+++.+.+.|++|++++|+.. .. +.++..+.. .. .|..+.+... .+.+..+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG-- 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC--
Confidence 368999999999999999999999999999987643 22 222222322 12 2433332222 2222222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 80 ~id~vi~~ag~ 90 (256)
T PRK12745 80 RIDCLVNNAGV 90 (256)
T ss_pred CCCEEEECCcc
Confidence 48999999974
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0012 Score=53.93 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHHH----HcCC--CEE--EeCCCCcHHHHHHHHh--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK----DLGA--DVC--INYKTEDFVARVKEET--GGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~~----~~g~--~~~--~~~~~~~~~~~~~~~~--~~~ 207 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+. +..+.+. .... ... .|..+.+....+.+.. .-.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468899999999999999999999999999999863 3333322 2211 111 2443333222222211 012
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||+++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 48999999983
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00065 Score=55.31 Aligned_cols=76 Identities=29% Similarity=0.364 Sum_probs=48.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH-H---HcCCCE-E--EeCCCCcHHHHH----HHHhCCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-K---DLGADV-C--INYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~---~~g~~~-~--~~~~~~~~~~~~----~~~~~~~~ 208 (274)
+++||+|++|++|..+++.+.+.|++++++.+ ++++.+.. . ..+... . .|..+....+.+ .+.. ..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL--GP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc--CC
Confidence 57899999999999999999999999999887 44443322 1 222221 1 233332222222 2222 34
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||+++|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999974
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.001 Score=56.87 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---Hc-CC---CEEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DL-GA---DVCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~-g~---~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.++++||+|++|.+|..+++.+.+.|++|++++|+.+..+... .. +. ...+ |..+.+. +.+... ++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~ 78 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGS---FELAID--GC 78 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchH---HHHHHc--CC
Confidence 4789999999999999999999999999998888766443222 11 11 1122 3333322 233332 48
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||+++|.
T Consensus 79 d~vih~A~~ 87 (325)
T PLN02989 79 ETVFHTASP 87 (325)
T ss_pred CEEEEeCCC
Confidence 999999973
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.001 Score=56.92 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----C--CC-EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----G--AD-VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g--~~-~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.|++++|+|++|.+|..+++.+...|++|+++.|+.+..+.+.++ + .. ..+ |..+.+ .+.+... ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEES---SFEQAIE--GC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcc---hHHHHHh--CC
Confidence 478999999999999999999999999999888876644332211 1 11 112 222222 2233332 48
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||++++.
T Consensus 79 d~vih~A~~ 87 (322)
T PLN02986 79 DAVFHTASP 87 (322)
T ss_pred CEEEEeCCC
Confidence 999999873
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0011 Score=54.64 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=49.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh----hhHHH----HHHcCCCE-E--EeCCCCcHHHHHHHHh-C-
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAV----CKDLGADV-C--INYKTEDFVARVKEET-G- 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~----~~~~~----~~~~g~~~-~--~~~~~~~~~~~~~~~~-~- 205 (274)
.+++++|+|++|++|.++++.+.+.|++++++.++. +..+. ++..+... . .|..+.+..+.+.+.. .
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999977765432 22222 22233322 1 2333332222222211 1
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..++|++|+++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 1358999999985
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0013 Score=54.03 Aligned_cols=79 Identities=25% Similarity=0.364 Sum_probs=50.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHHH-HcCCCE-E--EeCCCCcHHH----HHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DLGADV-C--INYKTEDFVA----RVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~~-~~g~~~-~--~~~~~~~~~~----~~~~~~~~~~~ 209 (274)
.+++++|+|++|++|..++..+.+.|++|++..+ ++++.+.+. +++... . .|..+.+... .+.+.. +.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF-GKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 3678999999999999999999999999988654 444444433 333221 1 2333322222 222222 2248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 83 d~li~~ag~ 91 (253)
T PRK08642 83 TTVVNNALA 91 (253)
T ss_pred eEEEECCCc
Confidence 999999863
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0026 Score=48.21 Aligned_cols=103 Identities=18% Similarity=0.193 Sum_probs=63.9
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.-.|++++|.| .|.+|..+++.++.+|++|++++.++-+.-++..-|.... . +.+... ..|++|.+
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-~---------~~~a~~--~adi~vta 85 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-T---------LEEALR--DADIFVTA 85 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-----------HHHHTT--T-SEEEE-
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec-C---------HHHHHh--hCCEEEEC
Confidence 345799999999 5999999999999999999999998877655555565432 1 122222 37999999
Q ss_pred CChhh--HHHhhhccccCCEEEEEecCCCCccccchhhHhh
Q 024011 216 MGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 254 (274)
Q Consensus 216 ~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 254 (274)
.|... ..+-++.|+++.-+..+|... .++++..+-.
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d---~Eid~~~L~~ 123 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFD---VEIDVDALEA 123 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSST---TSBTHHHHHT
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCc---eeEeeccccc
Confidence 99754 356678888766555555433 3555544443
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00072 Score=57.51 Aligned_cols=75 Identities=19% Similarity=0.247 Sum_probs=50.7
Q ss_pred EEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH-HcC---CCE---EEeCCCCcHHHHHHHHh-C-CCCccEEE
Q 024011 144 LVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---ADV---CINYKTEDFVARVKEET-G-GKGVDVIL 213 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g---~~~---~~~~~~~~~~~~~~~~~-~-~~~~d~vi 213 (274)
+|+|+++++|.++++.+.+.| ++|+++.|++++.+.+. ++. ... ..|..+.+..+.+.+.. . ..++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999999999 99999999887765443 332 111 23444433333333222 1 13589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 99984
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0017 Score=56.95 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=73.6
Q ss_pred chHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
.+....+..+.+..++++|+++|-.|+ |.|..+..+++..|++|+.++.+++.++.+++......++....++.
T Consensus 150 ~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~---- 223 (383)
T PRK11705 150 EAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYR---- 223 (383)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchh----
Confidence 334455555656778899999999996 57888888888889999999999999888875432211111112221
Q ss_pred HHhCCCCccEEEEC-----CCh----hhHHHhhhccccCCEEEEEe
Q 024011 202 EETGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 202 ~~~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g 238 (274)
+. ...+|.|+.. .|. ..+..+.+.|+++|++++..
T Consensus 224 ~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 224 DL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 2358988753 232 23567778999999998764
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00072 Score=55.44 Aligned_cols=74 Identities=19% Similarity=0.307 Sum_probs=49.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHHH----Hc-CCC----EEEeCCCCcHHHHH----HHHhCCCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCK----DL-GAD----VCINYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~~----~~-g~~----~~~~~~~~~~~~~~----~~~~~~~~ 208 (274)
++|+|++|++|..+++.+.+.|++|++++|+ .++++.+. +. +.. ...|..+.+..+.+ .+.. .+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 79 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM--GG 79 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc--CC
Confidence 7999999999999999999999999999987 55554332 11 111 11244333322222 2222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 80 id~vi~~ag~ 89 (251)
T PRK07069 80 LSVLVNNAGV 89 (251)
T ss_pred ccEEEECCCc
Confidence 8999999984
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00079 Score=63.39 Aligned_cols=77 Identities=26% Similarity=0.320 Sum_probs=54.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~~ 208 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+++.++.+. ..+.... .|..+.+..+.+ .+.. .+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~--g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH--GH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Confidence 689999999999999999999999999999999988765543 2233221 244333222222 2222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 8999999984
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0015 Score=55.98 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=50.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH-HcCC-C-EEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGA-D-VCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~-~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.|+++||+|++|.+|..+++.+.+.| .+|++.+|+..+.+.+. .+.. . ..+..+-.+ .+.+.+... ++|+||
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~--~iD~Vi 79 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALR--GVDYVV 79 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHh--cCCEEE
Confidence 47899999999999999999988876 68998888766543332 2221 1 122222222 223333333 389999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+++|.
T Consensus 80 h~Ag~ 84 (324)
T TIGR03589 80 HAAAL 84 (324)
T ss_pred ECccc
Confidence 99874
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0031 Score=48.52 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=62.5
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
...++...++...+.+...--.|++++|.|++.-+|..+++.+.+.|++|+++.|+.++
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~--------------------- 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKN--------------------- 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchh---------------------
Confidence 33445444444444444334578999999983346999999999999999888876321
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+... .+|+||.+++.+.+ -..+.++++-.+++++...
T Consensus 81 --l~~~l~--~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 81 --LKEHTK--QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred --HHHHHh--hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 112222 27899988887542 1223456666677777654
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0018 Score=57.55 Aligned_cols=141 Identities=16% Similarity=0.255 Sum_probs=89.7
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEE-EEEe----------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 60 YPGLECSGTILSVGKNVSRWKVGDQV-CALL----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V-~~~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
.-|||+++-+.+|+++++..-.|+.= ++-+ .++.|++. +++|+.+..+. .....
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t-~i~~~ 161 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTET-GIGAG 161 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhc-CCCCC
Confidence 35999999999999998776666642 1111 12333333 33334333222 22334
Q ss_pred hHHHHHHHHHhhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHH-HHHHcCCCEEEeCCCCcHH
Q 024011 123 VACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 123 ~~~~a~~~l~~~~~---~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 197 (274)
+.+.++.++..... ..++++++|.|+ |.+|.++++.++..|+ +|+++.|+.++.+ .+++++.. ..+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------ 233 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------ 233 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH------
Confidence 55666666633222 256899999997 9999999999999998 8999999988865 45566653 2221
Q ss_pred HHHHHHhCCCCccEEEECCChh
Q 024011 198 ARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+.+.+.. .++|+||++++.+
T Consensus 234 ~~~~~~l--~~aDvVI~aT~s~ 253 (423)
T PRK00045 234 DELPEAL--AEADIVISSTGAP 253 (423)
T ss_pred HHHHHHh--ccCCEEEECCCCC
Confidence 1222222 2489999999864
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0017 Score=52.56 Aligned_cols=73 Identities=30% Similarity=0.374 Sum_probs=50.5
Q ss_pred EEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc--CCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VC--INYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+|+|+++++|..+++.+.+.|++|++++|+.++.+.+. ++ +.. .. .|..+.+....+.+.. ..+|++|+++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999999999999999999877665443 22 222 22 2433433333343333 34899999998
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 4
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0013 Score=53.70 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=48.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHH----HHcCCCE-E--EeCCCCcHHHHHHHHh--CCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVC----KDLGADV-C--INYKTEDFVARVKEET--GGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~ 208 (274)
+.+++||+|++|++|..+++.+.+.|+++++..++.++ .+.+ ...+... . .|..+.+....+.+.. .-.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999998876665442 2222 2233221 1 2333332222222111 1135
Q ss_pred ccEEEECCC
Q 024011 209 VDVILDCMG 217 (274)
Q Consensus 209 ~d~vi~~~g 217 (274)
+|.||+++|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 899999998
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00093 Score=55.50 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=49.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHH-HHc----CCCE-E--EeCCCCc----HHHHHHHHh-CC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC-KDL----GADV-C--INYKTED----FVARVKEET-GG 206 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~-~~~----g~~~-~--~~~~~~~----~~~~~~~~~-~~ 206 (274)
.+++|+|+++++|.++++.+.+.|++|+++.++ ++.++.+ +++ +... . .|..+.+ ..+.+.+.. ..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999999999999988654 4444332 222 2111 1 2443332 112222211 11
Q ss_pred -CCccEEEECCCh
Q 024011 207 -KGVDVILDCMGA 218 (274)
Q Consensus 207 -~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 358999999984
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0014 Score=53.54 Aligned_cols=77 Identities=17% Similarity=0.214 Sum_probs=49.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE---EEeCCCCcHHHH-H----HHHh-CCCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV---CINYKTEDFVAR-V----KEET-GGKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~-~----~~~~-~~~~~d~ 211 (274)
.+++|+|++|++|..+++.+.+.|++|++++|+.+.. .....+... ..|..+.+..+. + .+.. ....+|+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 3689999999999999999999999999999876542 122233222 124333332222 2 1111 2235899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 81 ~v~~ag~ 87 (243)
T PRK07023 81 LINNAGT 87 (243)
T ss_pred EEEcCcc
Confidence 9999874
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.002 Score=55.92 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=52.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc--CCC-EEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
-..++++||+|++|.+|..+++.+.+.|++|++++|+.+..+.+. .+ +.. ..+..+-.+ .+.+.+... ++|.|
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~V 83 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVK--GCDGV 83 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHc--CCCEE
Confidence 346789999999999999999999999999999988876544332 21 111 122222222 122333333 48999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 84 ih~A~~ 89 (353)
T PLN02896 84 FHVAAS 89 (353)
T ss_pred EECCcc
Confidence 999874
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0009 Score=55.23 Aligned_cols=39 Identities=28% Similarity=0.300 Sum_probs=33.5
Q ss_pred EEEEecCCchHHHHHHHHHHH----cCCeEEEEecChhhHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKC----QGVRVFVTAGSEEKLAVC 180 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~----~g~~v~~~~~~~~~~~~~ 180 (274)
.++|+|+++++|.++++.+.+ .|++|+++.|++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~ 44 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL 44 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH
Confidence 589999999999999887765 799999999998876554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0017 Score=53.08 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=49.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC----hhhHHHH----HHcCCCE-E--EeCCCCcHHHHHHHHh-C-
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKLAVC----KDLGADV-C--INYKTEDFVARVKEET-G- 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~----~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~-~- 205 (274)
.+++++|+|++|++|..+++.+...|++|+++++. .+..+.+ ...+... . .|..+.+..+.+.+.. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999886643 3333322 2233322 2 2333332222222211 1
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..++|.||+++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 1348999999984
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00074 Score=58.23 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=33.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+++++||+|++|.+|..+++.+...|++|++++|+.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4689999999999999999999999999999987654
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0016 Score=53.42 Aligned_cols=78 Identities=28% Similarity=0.354 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCC-----CEE---EeCCC-CcH----HHHHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGA-----DVC---INYKT-EDF----VARVKEE 203 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~-----~~~---~~~~~-~~~----~~~~~~~ 203 (274)
.+++++|+|+++++|.+++..+.+.|++++++.++.+. .+.+.+... ... .|..+ ... .+.+.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999998888877553 233322111 111 34443 222 2222333
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
. .++|++++|+|.
T Consensus 84 ~--g~id~lvnnAg~ 96 (251)
T COG1028 84 F--GRIDILVNNAGI 96 (251)
T ss_pred c--CCCCEEEECCCC
Confidence 2 349999999995
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0038 Score=52.11 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=61.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c---CCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L---GADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
...+++++|+|+ |++|.+++..+...|++|+++.|+.++.+.+.+ + +.......+ + . ....+|+|
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~----~-~~~~~Div 182 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----E----L-PLHRVDLI 182 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----h----h-cccCccEE
Confidence 355789999998 899999999999999999999999887655532 2 211111111 0 0 11248999
Q ss_pred EECCChhh---H---HHhhhccccCCEEEEEecCC
Q 024011 213 LDCMGASY---F---QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 213 i~~~g~~~---~---~~~~~~l~~~g~~v~~g~~~ 241 (274)
|++++... . ....+.++++..++++....
T Consensus 183 Inatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 183 INATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 99987531 1 11234567777788776543
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0021 Score=53.09 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=30.3
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEec
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
+|++++|+|++ +++|..+++.+.+.|++|+++.+
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 58999999997 48999999999999999998753
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0028 Score=49.35 Aligned_cols=89 Identities=15% Similarity=0.136 Sum_probs=59.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|+++.|+|. |.||..+++.++..|++|++.+++..........+... .++.+.+.+ .|+|+.+..
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~------aDiv~~~~p 100 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQ------ADIVSLHLP 100 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-------SEEEE-SS
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccccee------eehhhhcch------hhhhhhhhc
Confidence 35899999996 99999999999999999999999887665444444311 122222221 688887765
Q ss_pred hh------hHHHhhhccccCCEEEEEec
Q 024011 218 AS------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~------~~~~~~~~l~~~g~~v~~g~ 239 (274)
.. .-...++.|+++..+|.++.
T Consensus 101 lt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 101 LTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred cccccceeeeeeeeeccccceEEEeccc
Confidence 31 12455777887777776654
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.016 Score=48.34 Aligned_cols=211 Identities=16% Similarity=0.158 Sum_probs=117.2
Q ss_pred CCCeEEEEEeeeecCh-hhhHhhcCCCCCCCCCCCCCC-CceeEEEEE-ecCCCCCCCCCCEEEEEecC---Ceeee---
Q 024011 26 KDDEVLIKVEATALNR-ADTLQRKGSYPPPKGASPYPG-LECSGTILS-VGKNVSRWKVGDQVCALLGG---GGYAE--- 96 (274)
Q Consensus 26 ~~~ev~V~v~~~~i~~-~D~~~~~g~~~~~~~~p~~~G-~e~~G~V~~-vG~~~~~~~~Gd~V~~~~~~---g~~~~--- 96 (274)
..+||+|+.-+..-.. +|..+..-.-.--.+..-++. .|.+=.|.+ ..++..-|+.|+..+.+..- ....+
T Consensus 29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l~ 108 (371)
T COG0686 29 HGHEVLVETGAGAGSGFDDDDYEAAGAKIVATAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEALL 108 (371)
T ss_pred CCcEEEEecCCcCCCCCChHHHHHcCCEEecCHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHHH
Confidence 4579999998765544 333332211111111122344 566555554 22234459999988877521 10000
Q ss_pred --EEeeeCCCeEECCCC-C----CHHhhccCcchHHHHHHHHHhhc----------CCCCCCEEEEecCCchHHHHHHHH
Q 024011 97 --KVAVPAGQVLPVPSG-V----SLKDAAAFPEVACTVWSTVFMTS----------HLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 97 --~~~~~~~~~~~~p~~-~----~~~~aa~l~~~~~~a~~~l~~~~----------~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
-+..-..-.+.+|++ + +..+.|.-......+++..+... ++.+++ +.|+|+ |.+|.-++++
T Consensus 109 ~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~~k-v~iiGG-GvvgtnaAki 186 (371)
T COG0686 109 KSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLPAK-VVVLGG-GVVGTNAAKI 186 (371)
T ss_pred HcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCCcc-EEEECC-ccccchHHHH
Confidence 000000112223331 1 22333323233444554322221 234555 556675 8999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEECC---Ch----hhHHHhhhcccc
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCM---GA----SYFQRNLGSLNI 230 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~---g~----~~~~~~~~~l~~ 230 (274)
+..+|++|.+.+++.++++.+..+-...+ ...+..++.+.+. ..|++|.+. |. -..++.++.|++
T Consensus 187 A~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~------~aDlvIgaVLIpgakaPkLvt~e~vk~Mkp 260 (371)
T COG0686 187 AIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK------KADLVIGAVLIPGAKAPKLVTREMVKQMKP 260 (371)
T ss_pred HhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh------hccEEEEEEEecCCCCceehhHHHHHhcCC
Confidence 99999999999999999998876443332 2223333333332 379998764 22 136777899999
Q ss_pred CCEEEEEecCCCCc
Q 024011 231 DGRLFIIGTQGGAK 244 (274)
Q Consensus 231 ~g~~v~~g~~~~~~ 244 (274)
++.++++....+..
T Consensus 261 GsVivDVAiDqGGc 274 (371)
T COG0686 261 GSVIVDVAIDQGGC 274 (371)
T ss_pred CcEEEEEEEcCCCc
Confidence 99999998776543
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0021 Score=55.57 Aligned_cols=78 Identities=15% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHH--HHHHcC---CC-EEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLG---AD-VCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~--~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
..+++++|+|++|.+|..+++.+.+.|++|.+++|+.+... .+..+. .. ..+..+-.+ .+.+.+... ++|+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~ 84 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAID--GCDG 84 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHh--cCCE
Confidence 35789999999999999999999999999999998765421 122221 11 122222212 122333332 4899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
||++++.
T Consensus 85 Vih~A~~ 91 (342)
T PLN02214 85 VFHTASP 91 (342)
T ss_pred EEEecCC
Confidence 9999974
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0014 Score=53.60 Aligned_cols=78 Identities=19% Similarity=0.234 Sum_probs=50.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHH----HHcCCCE-E--EeCCCCcHHHHHHHHh--CCCCcc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-C--INYKTEDFVARVKEET--GGKGVD 210 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~d 210 (274)
++++|+|++|++|..+++.+.+.|++|+++ .++.++.+.. ++.+... . .|..+.+..+.+.+.. ...++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 579999999999999999999999998774 5665544332 2333221 2 2444433333333321 123589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00078 Score=60.50 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=62.7
Q ss_pred hhcCCCCCCEEE----EecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCC
Q 024011 133 MTSHLSPGESFL----VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 133 ~~~~~~~g~~vl----I~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (274)
...+.++|+.+| |+|++|++|.+++++++..|++|+.+.+.+.+....+..+.+ .++|.+...+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~--- 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY--- 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH---
Confidence 345678888888 888889999999999999999999987665543333333333 345555444444443221
Q ss_pred CccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 208 ~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+...++.|.++|+++.++...
T Consensus 104 -----------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 -----------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -----------HHHHHHHHhccCCCEEEEEcccc
Confidence 22445566677777777776654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.002 Score=53.12 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
.++++||+|+++ ++|.+++..+...|++|++++|+
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 468899999984 89999999999999999999887
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0014 Score=55.37 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH---HHHHHcCC-C---EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCKDLGA-D---VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~---~~~~~~g~-~---~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.++.|+|+||+|-||..++..+..+|++|..++|+++.. +.++++.. . .++ |..+.+.. .+.. .|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf---~~ai--~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSF---DKAI--DGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchH---HHHH--hCC
Confidence 578999999999999999999999999999999998863 34555441 1 122 33333322 2222 359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|.||.++.-
T Consensus 80 dgVfH~Asp 88 (327)
T KOG1502|consen 80 DGVFHTASP 88 (327)
T ss_pred CEEEEeCcc
Confidence 999998873
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0045 Score=51.62 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=67.2
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+....+....---.|++++|.|.+.-+|.-++.++...|++|+++.++.. +
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-------------------~--- 194 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-------------------D--- 194 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------------h---
Confidence 455655555555544332346999999999666999999999999999998875421 1
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+.+. ..|+||.++|...+-. -++++++..++.+|...
T Consensus 195 -l~~~~~--~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 -MASYLK--DADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred -HHHHHh--hCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence 122222 2899999999764311 15678888888888764
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0026 Score=56.05 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=64.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHH------HH-HHc-CCCEE-EeCCCCcHHHHHHHHhCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA------VC-KDL-GADVC-INYKTEDFVARVKEETGG 206 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~------~~-~~~-g~~~~-~~~~~~~~~~~~~~~~~~ 206 (274)
.-..+.+++|+|++|.+|..+++.+.+.|++|++++|+.++.+ .. ... +...+ .|..+.+....+.+..+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~- 134 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG- 134 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC-
Confidence 3456789999999999999999999999999999999875432 11 112 22222 24444333333322111
Q ss_pred CCccEEEECCChhh-------------HHHhhhccccC--CEEEEEecCC
Q 024011 207 KGVDVILDCMGASY-------------FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-------------~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
.++|+||+|++... ...+++.+... .+++.++...
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 15999999986310 11233434333 4788887654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0017 Score=56.14 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+++||+||+|.+|..+++.+...|.+|++++|+.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999999999999999999999999999998753
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=53.29 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=49.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHH----HHHcCCCEE---EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAV----CKDLGADVC---INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~----~~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
+++++|+|++|++|..+++.+.+.|++|++.. +++++.+. ++..+.... .|..+.+..+.+.+.. . ...+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999988776 34443322 233343222 2433332222222211 1 1248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0055 Score=51.66 Aligned_cols=97 Identities=11% Similarity=0.148 Sum_probs=58.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCh---hhHHHH-HHc---CCC-EE--EeCCCCcHHHHHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE---EKLAVC-KDL---GAD-VC--INYKTEDFVARVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~---~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~~~~~~ 206 (274)
-.+++++|+|+ ||+|.+++..+...|++ |+++.|+. ++.+.+ +++ +.. .. .+.++ .+.+.+...
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~---~~~~~~~~~- 198 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND---TEKLKAEIA- 198 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh---hhHHHhhhc-
Confidence 35789999998 89999999999999995 99999986 444333 222 111 11 12211 112222222
Q ss_pred CCccEEEECCChhh------HHH-hhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGASY------FQR-NLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~~~------~~~-~~~~l~~~g~~v~~g~~ 240 (274)
.+|++|||..... ... ....+.+...++++-..
T Consensus 199 -~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 238 (289)
T PRK12548 199 -SSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN 238 (289)
T ss_pred -cCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence 3799999875211 111 13456666667776543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0026 Score=52.08 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=48.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHH-HhC-CCCcc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC---INYKTEDFVARVKE-ETG-GKGVD 210 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~-~~~-~~~~d 210 (274)
++++|+|+++++|..+++.+.+.|++++++. +++++.+.. +..+.... .|..+.+..+.+.+ ... -..+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999999988765 454444332 22332222 23333222222222 111 12489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 83 ~li~~ag~ 90 (248)
T PRK06947 83 ALVNNAGI 90 (248)
T ss_pred EEEECCcc
Confidence 99999983
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00034 Score=51.13 Aligned_cols=49 Identities=41% Similarity=0.708 Sum_probs=36.1
Q ss_pred cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC--hhhH-HHhhhccccCCEEEEEec
Q 024011 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYF-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~~~-~~~~~~l~~~g~~v~~g~ 239 (274)
+|+++++|++..++ ....++|+|||++| ...+ ..+++++ ++|+++.++.
T Consensus 1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 68999999996665 44567999999999 6554 6777888 9999999984
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0068 Score=50.75 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=57.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.-.|++++|.|+++-+|..++.++...|++|+++.+....+ .+.+ +.+|+||+++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L-----------------------~~~~--~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL-----------------------PELV--KQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH-----------------------HHHh--ccCCEEEEcc
Confidence 35689999999855599999999999999888877532211 1111 2489999999
Q ss_pred ChhhHHHhhhccccCCEEEEEecCC
Q 024011 217 GASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 217 g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|.+.. -..+.++++..+++++...
T Consensus 211 G~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 211 GKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred CCCCc-CCHHHcCCCCEEEEEEEee
Confidence 86542 2235688888888888654
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.039 Score=46.59 Aligned_cols=167 Identities=15% Similarity=0.103 Sum_probs=98.9
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCEEEEEecCC---------------------------eeeeEEeeeCCCeEECCCC
Q 024011 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG---------------------------GYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 59 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g---------------------------~~~~~~~~~~~~~~~~p~~ 111 (274)
.+|-.-+ ++|++ |.++.+.+|+||+++.+-+ .|-+|.++..+..+.-
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~--- 105 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP--- 105 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc---
Confidence 3443333 67777 7889999999999986421 2333444333332210
Q ss_pred CCHHh-hccCcchHHHHHHHHHhhcC---CCCCCEEEEecCCchHHHHHHHHHH--HcCCeEEEEecChhhHHHHHHcCC
Q 024011 112 VSLKD-AAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGK--CQGVRVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 112 ~~~~~-aa~l~~~~~~a~~~l~~~~~---~~~g~~vlI~Ga~g~iG~~~~~~~~--~~g~~v~~~~~~~~~~~~~~~~g~ 185 (274)
+.++ -+.+-+.+.|.|.. .+... .-..+.|+|+.|++=.++.++..++ ..+.+++.++ |+....+.+.+|.
T Consensus 106 -~~e~~~~LlrPLf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~ 182 (314)
T PF11017_consen 106 -EREDWQMLLRPLFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGC 182 (314)
T ss_pred -chhHHHHHHHHHHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCC
Confidence 1122 23345566677753 23221 2345789999999999999999998 3345888887 5555567777875
Q ss_pred -CEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCC-EEEEEecCC
Q 024011 186 -DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDG-RLFIIGTQG 241 (274)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g-~~v~~g~~~ 241 (274)
+.++.+++ +..... ..--+++|.+|... ...+.+.+...- ..+.+|...
T Consensus 183 Yd~V~~Yd~------i~~l~~-~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 183 YDEVLTYDD------IDSLDA-PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred ceEEeehhh------hhhccC-CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 56665543 222211 23568899999754 344444444432 456666655
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0016 Score=55.14 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=31.1
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEec
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
.||+++|+|++ +|||.++++.+.+.|++|++.++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 58999999995 89999999999999999999764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.002 Score=54.98 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=34.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
.++++||+|++|.+|..++..+...|.+|++++|+.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 46899999999999999999999999999999887654
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.005 Score=47.59 Aligned_cols=101 Identities=20% Similarity=0.269 Sum_probs=70.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~ 205 (274)
....+++|+.++=.|+ |.|...+++++.. ..+|++++++++.++..+ ++|.+.+ +..+..+ .+.+.
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~---~L~~~-- 100 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPE---ALPDL-- 100 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchH---hhcCC--
Confidence 3457899999888887 4578888888544 359999999999887664 5776533 3333222 22221
Q ss_pred CCCccEEEECCCh---hhHHHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~---~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+|.+|-.-|. ..++.+++.++++||++.....-
T Consensus 101 -~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~naitl 138 (187)
T COG2242 101 -PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAITL 138 (187)
T ss_pred -CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEeecH
Confidence 148999866554 24788999999999999876643
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0039 Score=54.44 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=38.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
...++++||+|++|.+|..+++.+.+.|++|+++.++.+..+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 355789999999999999999999999999998888776554443
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.003 Score=54.73 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----CC--C-EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~--~-~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
..+++||+|++|.+|..++..+...|.+|++++|+.+..+.+..+ +. . ..+ |..+.+. +.+... ++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~--~~ 78 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGS---FDDAIR--GC 78 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhh---HHHHHh--CC
Confidence 467899999999999999999999999999998876554433221 11 1 112 3333222 223332 48
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|.||++++
T Consensus 79 d~ViH~A~ 86 (351)
T PLN02650 79 TGVFHVAT 86 (351)
T ss_pred CEEEEeCC
Confidence 99999886
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.015 Score=46.07 Aligned_cols=100 Identities=15% Similarity=0.221 Sum_probs=65.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcC-CCEEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLG-ADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~ 205 (274)
....+.++++++-.|+ |. |...+.+++..+ .+|++++.+++.++.++ .++ .+.+... ..+..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~-~~d~~~~l~~-~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLI-KGEAPEILFT-I- 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEE-EechhhhHhh-c-
Confidence 3457889999999997 33 888888887653 58999999998877654 344 2222111 1122222222 1
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEE
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~ 237 (274)
...+|.||.+.+. ..+..+.+.|+++|+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 1359999986553 2366777889999999863
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0036 Score=53.92 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=49.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH---HHc---CCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDL---GADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.++++||+|++|.+|..+++.+...|++|+++.|+.+..... ..+ +.-..+..+-.+. +.+.+... ++|+|
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~--~~d~v 84 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDE-ESFEAPIA--GCDLV 84 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCCh-HHHHHHHh--cCCEE
Confidence 478999999999999999999999999998888776543221 111 1112222222221 22333332 48999
Q ss_pred EECCC
Q 024011 213 LDCMG 217 (274)
Q Consensus 213 i~~~g 217 (274)
|++++
T Consensus 85 ih~A~ 89 (338)
T PLN00198 85 FHVAT 89 (338)
T ss_pred EEeCC
Confidence 99987
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0032 Score=51.07 Aligned_cols=76 Identities=26% Similarity=0.288 Sum_probs=48.4
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHH----HHHHcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCccEE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGADV-C--INYKTEDFVARVKEET-G-GKGVDVI 212 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~----~~~~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~d~v 212 (274)
++|+|++|++|..+++.+.+.|++|++++|+. ++.+ .+++.+... . .|..+.+..+.+.+.. . -.++|.|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999998875 3322 223344322 2 2443333222222211 0 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 999985
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.004 Score=51.06 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=34.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHH
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVC 180 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~ 180 (274)
++++|+|++|++|..+++.+.+.|++|++++|++ +.++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~ 42 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL 42 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH
Confidence 5799999999999999999999999999999886 444443
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0027 Score=57.63 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=54.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+.+|++++|.|. |..|++++++++..|++|++++++.++.+.+++.|.......+ ..+.+ ..+|+||.+
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~---~~~~l------~~~D~VV~S 77 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSD---AVQQI------ADYALVVTS 77 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcc---hHhHh------hcCCEEEEC
Confidence 3567899999996 9999999999999999999999776666666677764432111 11112 237999999
Q ss_pred CChh
Q 024011 216 MGAS 219 (274)
Q Consensus 216 ~g~~ 219 (274)
.|.+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 9864
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0039 Score=54.81 Aligned_cols=77 Identities=9% Similarity=0.019 Sum_probs=50.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCC------CEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA------DVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
-..++|||+|++|-+|..+++.+.+. |.+|++++++.++.+.+...+. -..+..+-.+ .+.+.+... ++|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~--~~d 88 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIK--MAD 88 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhh--cCC
Confidence 34568999999999999999999887 5899999987766554433221 1122222222 123333333 489
Q ss_pred EEEECCC
Q 024011 211 VILDCMG 217 (274)
Q Consensus 211 ~vi~~~g 217 (274)
+||++++
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9999997
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0045 Score=50.44 Aligned_cols=35 Identities=31% Similarity=0.289 Sum_probs=31.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~ 37 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN 37 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH
Confidence 57999999999999999999999999999998743
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0015 Score=46.48 Aligned_cols=92 Identities=24% Similarity=0.284 Sum_probs=61.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCeEEEEecChhhHHHHHHc----C--CCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDL----G--ADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
|+++||-.|+ |.|..+..+++ ..+++|+.++.+++.++.+++. + ....+. ..++ ... ......+|+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~--~~d~-~~~--~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFV--QGDA-EFD--PDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEE--ESCC-HGG--TTTSSCEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEE--ECcc-ccC--cccCCCCCE
Confidence 5789999986 56888888888 4788999999999988777532 2 222221 1122 111 112235999
Q ss_pred EEECC-Chh----h------HHHhhhccccCCEEEEE
Q 024011 212 ILDCM-GAS----Y------FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 212 vi~~~-g~~----~------~~~~~~~l~~~g~~v~~ 237 (274)
|+... ... . +....+.|+++|+++..
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 99877 321 1 46677889999998864
|
... |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.011 Score=52.64 Aligned_cols=140 Identities=17% Similarity=0.280 Sum_probs=88.9
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEEE-----------------EEecCCeeeeEEeeeCCCeEE---C-CCCCCHHhhc
Q 024011 60 YPGLECSGTILSVGKNVSRWKVGDQVC-----------------ALLGGGGYAEKVAVPAGQVLP---V-PSGVSLKDAA 118 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-----------------~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa 118 (274)
.-|.|+++.+.+|+++++..-.|+.=+ +...++.|++++.++. .+.. + +..+|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 458999999999999987766666422 1112467888877765 2221 2 2222222221
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHH-HHHHcCCCEEEeCCCCcH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGADVCINYKTEDF 196 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 196 (274)
.-.+. +..+..++++++|.|+ |.+|..+++.++..| .+|+++.|+.++.+ .+++++... ++.
T Consensus 168 --------v~la~-~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-i~~----- 231 (417)
T TIGR01035 168 --------VELAE-RIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-VKF----- 231 (417)
T ss_pred --------HHHHH-HHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-eeH-----
Confidence 11122 2233456899999997 999999999999999 58999999988765 445666532 221
Q ss_pred HHHHHHHhCCCCccEEEECCChh
Q 024011 197 VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+.+.+... ++|+||++++..
T Consensus 232 -~~l~~~l~--~aDvVi~aT~s~ 251 (417)
T TIGR01035 232 -EDLEEYLA--EADIVISSTGAP 251 (417)
T ss_pred -HHHHHHHh--hCCEEEECCCCC
Confidence 12222222 489999999864
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0085 Score=45.30 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=61.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..+++++|+|+ |++|..+++.+.+.| .+|++++++.++.+.+. +++... ......+..+ .. ..+|+|+++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~--~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEE----LL--AEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhh----cc--ccCCEEEeC
Confidence 45789999997 999999999999886 68999999988776543 444321 0001111111 11 348999999
Q ss_pred CChhhH-----HHhhhccccCCEEEEEecC
Q 024011 216 MGASYF-----QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~-----~~~~~~l~~~g~~v~~g~~ 240 (274)
+..... ......++++..+++++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 89 TPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 876432 1112345677777777654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00046 Score=57.49 Aligned_cols=100 Identities=26% Similarity=0.404 Sum_probs=61.2
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC--EEEeCCCCcHHHHHH
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVK 201 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~ 201 (274)
+..+.++.++++|++||-+|+ |.|..+..++++.|++|+.++.++++.+.++ +.|.. ..+.. .++ +
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~ 122 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----R 122 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----G
T ss_pred HHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----c
Confidence 334557789999999999996 5899999999999999999999999887775 34421 11211 122 1
Q ss_pred HHhCCCCccEEEEC-----CChh----hHHHhhhccccCCEEEEE
Q 024011 202 EETGGKGVDVILDC-----MGAS----YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 202 ~~~~~~~~d~vi~~-----~g~~----~~~~~~~~l~~~g~~v~~ 237 (274)
+... .+|.|+.. .|.. .+..+.+.|+|+|++++-
T Consensus 123 ~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 123 DLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp G-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred ccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 1111 58987653 3321 256777899999999754
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0054 Score=51.40 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=62.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..+++++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+ +......... .+. .+.. ..+|+|||+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~~~----~~~~--~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-LEL----QEEL--ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-ccc----hhcc--ccCCEEEEC
Confidence 45789999997 999999999999999 599999999988766643 3211101110 011 1111 348999999
Q ss_pred CChhhH------HHhhhccccCCEEEEEecC
Q 024011 216 MGASYF------QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~------~~~~~~l~~~g~~v~~g~~ 240 (274)
+..... +...+.+++...++++-..
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY~ 223 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIYG 223 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 864321 1223566777777777553
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.042 Score=43.63 Aligned_cols=88 Identities=18% Similarity=0.242 Sum_probs=58.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
-.|++++|+|. |.+|..+++.+...|++|++++++.++++.+.+ ++... ++.. ++. ...+|+++.++
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~------~l~----~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE------EIY----SVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch------hhc----cccCCEEEecc
Confidence 35799999997 899999999999999999999999888777654 35332 2211 111 12388888776
Q ss_pred Chh-hHHHhhhccccCCEEEEEec
Q 024011 217 GAS-YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 217 g~~-~~~~~~~~l~~~g~~v~~g~ 239 (274)
... .....++.++ .+++.-+.
T Consensus 94 ~~~~I~~~~~~~l~--~~~v~~~A 115 (200)
T cd01075 94 LGGVINDDTIPQLK--AKAIAGAA 115 (200)
T ss_pred cccccCHHHHHHcC--CCEEEECC
Confidence 543 2333444453 34554443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0096 Score=52.38 Aligned_cols=90 Identities=20% Similarity=0.300 Sum_probs=56.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHH--cCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD--LGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|+|.|+ |.+|..+++.+.+.+- +|++.+|+.++++.+.+ .+.. .....+..+ .+.+.+...+ .|+||||+|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~--~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLRG--CDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHTT--SSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHhc--CCEEEECCc
Confidence 689999 9999999999998864 89999999999877754 2222 112222223 2335555544 699999999
Q ss_pred hhhHHHhh-hccccCCEEEE
Q 024011 218 ASYFQRNL-GSLNIDGRLFI 236 (274)
Q Consensus 218 ~~~~~~~~-~~l~~~g~~v~ 236 (274)
.......+ .+++.+-.+++
T Consensus 77 p~~~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 77 PFFGEPVARACIEAGVHYVD 96 (386)
T ss_dssp GGGHHHHHHHHHHHT-EEEE
T ss_pred cchhHHHHHHHHHhCCCeec
Confidence 65433333 34555566666
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0058 Score=52.88 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=47.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++|||+|++|-+|..+++.+... |.+|++++|+.++...+.....-.....+-.+..+.+.+... ++|+||++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK--KCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc--CCCEEEECcc
Confidence 46999999999999999999875 689999998765543332211112222222111122333332 4899999875
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.014 Score=51.56 Aligned_cols=74 Identities=9% Similarity=0.149 Sum_probs=53.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.+++++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+. +++...... .+.+.+.... +|+||+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~------~~~l~~~l~~--aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY------LSELPQLIKK--ADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec------HHHHHHHhcc--CCEEEEC
Confidence 45789999997 9999999999999996 7999999988776654 444222221 1233333333 8999999
Q ss_pred CChhh
Q 024011 216 MGASY 220 (274)
Q Consensus 216 ~g~~~ 220 (274)
++.+.
T Consensus 250 T~a~~ 254 (414)
T PRK13940 250 VNVLE 254 (414)
T ss_pred cCCCC
Confidence 99754
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0038 Score=52.43 Aligned_cols=74 Identities=20% Similarity=0.094 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCE-EEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|.|+ |+.+.+++..+...|+ +++++.|+.++.+.+.+ ++... +.... ..+++.... ..+|+|||+
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~~--~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAIE--KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhcc--cCCCEEEEC
Confidence 5789999997 9999999999999998 79999999888766643 32111 11111 011122222 248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 864
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0046 Score=58.31 Aligned_cols=78 Identities=10% Similarity=0.008 Sum_probs=49.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++++|||+||+|-+|..+++.+.+. |.+|++++|.............-..+..+-.+....+.+... ++|+||+++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViHlA 390 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK--KCDVVLPLV 390 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc--CCCEEEECc
Confidence 56789999999999999999988875 799999998765433221111112222222221122233332 489999988
Q ss_pred C
Q 024011 217 G 217 (274)
Q Consensus 217 g 217 (274)
+
T Consensus 391 a 391 (660)
T PRK08125 391 A 391 (660)
T ss_pred c
Confidence 6
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0056 Score=52.96 Aligned_cols=76 Identities=22% Similarity=0.405 Sum_probs=48.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHHc----CCC-EEE--eCCCCcHHHHHHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDL----GAD-VCI--NYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~----g~~-~~~--~~~~~~~~~~~~~~~~~~~ 208 (274)
+++++|+|++|.+|..+++.+...|.+|+++++.... .+.+... +.. ... |..+.+ .+.+.....+
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~l~~~~~~~~ 81 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE---ALEKVFASTR 81 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH---HHHHHHHhCC
Confidence 6889999999999999999999999999998764321 1222211 111 122 333322 2333322235
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|.||++++.
T Consensus 82 ~d~vih~a~~ 91 (352)
T PLN02240 82 FDAVIHFAGL 91 (352)
T ss_pred CCEEEEcccc
Confidence 8999999873
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0044 Score=54.34 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=62.7
Q ss_pred CCEEEEe----cCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-----------HHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 140 GESFLVH----GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-----------CKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 140 g~~vlI~----Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
.++|||+ |++|.+|..+++.+...|.+|++++|+.+..+. +...+...+ ..+..+ +.+..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d----~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPAD----VKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHHH----HHhhh
Confidence 4689999 999999999999999999999999988764321 112233222 122212 22223
Q ss_pred CCCCccEEEECCChhh--HHHhhhccccC--CEEEEEecCC
Q 024011 205 GGKGVDVILDCMGASY--FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~--~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
...++|+||++.+... ....++.++.. .+++.++...
T Consensus 127 ~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~ 167 (378)
T PLN00016 127 AGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAG 167 (378)
T ss_pred ccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHh
Confidence 3346999999987532 34555655433 3788776543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0069 Score=49.18 Aligned_cols=71 Identities=18% Similarity=0.234 Sum_probs=54.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|+|+|++|.+|..+++.+...+++|.+..|+.. ..+.++..|...+ ..+.. ..+.+.+... |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~-~~~~l~~al~--g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYD-DPESLVAALK--GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT--HHHHHHHHT--TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccC-CHHHHHHHHc--CCceEEeecC
Confidence 689999999999999999999999999999864 3566777887654 33332 2445555554 5999999888
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0025 Score=51.77 Aligned_cols=72 Identities=19% Similarity=0.307 Sum_probs=45.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++++|+|+++++|..+++.+.+.+ ..++...++.... .. ... .. .|..+.+..+.+.+..+ ++|++|+|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~--~~~~~~~~~Dls~~~~~~~~~~~~~--~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQ--HDNVQWHALDVTDEAEIKQLSEQFT--QLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cc--cCceEEEEecCCCHHHHHHHHHhcC--CCCEEEEC
Confidence 368999999999999999888875 5666555544321 11 111 11 34444443444444443 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 75 aG~ 77 (235)
T PRK09009 75 VGM 77 (235)
T ss_pred Ccc
Confidence 985
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0024 Score=56.13 Aligned_cols=75 Identities=17% Similarity=0.315 Sum_probs=51.0
Q ss_pred CCCEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHH
Q 024011 139 PGESFLVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga----------------~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 201 (274)
.|+++||+|+ +|.+|.++++.+...|++|+++.++.+ .+. ..+. ..++..+ .+..+.+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~--~~~~-~~~dv~~~~~~~~~v~ 262 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT--PAGV-KRIDVESAQEMLDAVL 262 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC--CCCc-EEEccCCHHHHHHHHH
Confidence 6899999999 566999999999999999999987653 211 1111 2334333 33344444
Q ss_pred HHhCCCCccEEEECCChh
Q 024011 202 EETGGKGVDVILDCMGAS 219 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~ 219 (274)
+..+ .+|++|+|++..
T Consensus 263 ~~~~--~~DilI~~Aav~ 278 (399)
T PRK05579 263 AALP--QADIFIMAAAVA 278 (399)
T ss_pred HhcC--CCCEEEEccccc
Confidence 4433 489999999853
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0052 Score=51.28 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=60.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+|++++|.|+ ||.+.+++..++..|+ +++++.|+.++.+.+.+.-........... ..+......+|++||++
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~----~~~~~~~~~~dliINaT 198 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA----LADLEGLEEADLLINAT 198 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc----ccccccccccCEEEECC
Confidence 35899999997 9999999999999996 899999999988777543221110000000 00000000389999988
Q ss_pred ChhhHH------HhhhccccCCEEEEEecC
Q 024011 217 GASYFQ------RNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 217 g~~~~~------~~~~~l~~~g~~v~~g~~ 240 (274)
...... ...+.+++.-.+.++-..
T Consensus 199 p~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 199 PVGMAGPEGDSPVPAELLPKGAIVYDVVYN 228 (283)
T ss_pred CCCCCCCCCCCCCcHHhcCcCCEEEEeccC
Confidence 642110 113556666666666543
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.01 Score=50.21 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=33.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.++++++|+|++|.+|..+++.+.+.|++|+++.|+.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 3568999999999999999999999999999999853
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0048 Score=47.58 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=67.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC-C----------------CCcHHHHHHH
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-K----------------TEDFVARVKE 202 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~----------------~~~~~~~~~~ 202 (274)
..+++|+|+ |.+|..++++++.+|+++++.+...++++.....+...+... . .......+.+
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 367899996 999999999999999999999999988888877665443221 0 1222333444
Q ss_pred HhCCCCccEEEECCCh-----h--hHHHhhhccccCCEEEEEecCCCC
Q 024011 203 ETGGKGVDVILDCMGA-----S--YFQRNLGSLNIDGRLFIIGTQGGA 243 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~-----~--~~~~~~~~l~~~g~~v~~g~~~~~ 243 (274)
.... +|++|.+.-. + .....++.|+++..++++.-..+.
T Consensus 99 ~i~~--~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG 144 (168)
T PF01262_consen 99 FIAP--ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGG 144 (168)
T ss_dssp HHHH---SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-
T ss_pred HHhh--CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCC
Confidence 3332 7999864321 1 245677889988888888655443
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0018 Score=52.95 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
|+|+|++|-||.++++.+...|.+|++++|++.+.+........ ..+.+.+... .++|+|||-+|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~---------~~~~~~~~~~-~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT---------LWEGLADALT-LGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc---------ccchhhhccc-CCCCEEEECCCCc
Confidence 58999999999999999999999999999998765432111111 1112222222 2599999999964
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.013 Score=49.03 Aligned_cols=76 Identities=17% Similarity=0.135 Sum_probs=45.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-Hc----CCC-E--E--EeCCCCcHHHHHHHHhCCCCccE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DL----GAD-V--C--INYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~----g~~-~--~--~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
|||+||+|.+|..+++.+.+.+. +++++++++..+-.++ ++ ... . . ...-+-...+.+.......++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999998888875 8999999998875554 33 111 1 1 01112223445566666567999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
||.++.-
T Consensus 81 VfHaAA~ 87 (293)
T PF02719_consen 81 VFHAAAL 87 (293)
T ss_dssp EEE----
T ss_pred EEEChhc
Confidence 9999885
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0053 Score=50.11 Aligned_cols=70 Identities=29% Similarity=0.462 Sum_probs=47.2
Q ss_pred cCC--chHHHHHHHHHHHcCCeEEEEecChhhH----HHHH-HcCCCEEEe--CCCCc----HHHHHHHHhCCCCccEEE
Q 024011 147 GGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCK-DLGADVCIN--YKTED----FVARVKEETGGKGVDVIL 213 (274)
Q Consensus 147 Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~-~~g~~~~~~--~~~~~----~~~~~~~~~~~~~~d~vi 213 (274)
|++ +++|.++++.+.+.|++|++++++.+++ +.+. +.+.. ++. ..+.+ +.+.+.+..+ ..+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~-g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFG-GRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHC-SSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcC-CCeEEEE
Confidence 445 9999999999999999999999999873 3333 44543 443 33332 2233333441 3499999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 79 ~~a~~ 83 (241)
T PF13561_consen 79 NNAGI 83 (241)
T ss_dssp EEEES
T ss_pred ecccc
Confidence 98763
|
... |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.019 Score=45.65 Aligned_cols=114 Identities=11% Similarity=0.108 Sum_probs=66.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|++++|.|+ |.+|...++.+...|++|+++.+... .+..+.+.+. ......... + ... .++|+||-+++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~--~---~~l--~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE--P---SDI--VDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC--h---hhc--CCceEEEEcCC
Confidence 4789999997 99999999999999999999876432 2222222221 112111111 0 011 34899999998
Q ss_pred hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcc-eEEEEe
Q 024011 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGI 262 (274)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~ 262 (274)
.+..+..+......+.++.+.... ....+-....+.++ +++.-+
T Consensus 80 d~elN~~i~~~a~~~~lvn~~d~~-~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 80 DPRVNEQVKEDLPENALFNVITDA-ESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred CHHHHHHHHHHHHhCCcEEECCCC-ccCeEEEeeEEEcCCeEEEEE
Confidence 877666655444445555443332 22345555555444 444333
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=53.59 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=50.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|+|++|.+|..+++.+.+.|.+|++++|+.+....+...+...+ .|..+. +.+.+... ++|.||++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~---~~l~~~~~--~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDP---ASLRKAVA--GCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCH---HHHHHHHh--CCCEEEEecee
Confidence 68999999999999999999999999999998765443333333322 133222 23444443 38999998863
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.026 Score=41.18 Aligned_cols=93 Identities=14% Similarity=0.259 Sum_probs=56.5
Q ss_pred EEEecCCchHHHHHHHHHHHcC--CeEEEEe--cChhhH-HHHHHcCCCEEEeCCCCcH---H----------------H
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQG--VRVFVTA--GSEEKL-AVCKDLGADVCINYKTEDF---V----------------A 198 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~---~----------------~ 198 (274)
+.|.|++|.||..+..+.++.. ++|+..+ ++-+.+ +.++++.+..+.-.+.... . +
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 5789999999999999999997 6777665 333333 5566788877765443211 1 1
Q ss_pred HHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEE
Q 024011 199 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v 235 (274)
.+.+......+|+|+++..+ .-+...+..++.+=++.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 12222222358888887644 44777777777654443
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.021 Score=47.64 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=67.9
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+.+..+....---.|++++|.|.+.-+|.-++.++...++.|+++.+... ++.+
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~-------------------~l~~ 198 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK-------------------NLRH 198 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC-------------------CHHH
Confidence 355665555555544322235999999999888999999999999999988764321 2222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.++ ..|++|.++|.+.+-. -++++++..++.+|...
T Consensus 199 ~~~------~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin~ 234 (285)
T PRK10792 199 HVR------NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGINR 234 (285)
T ss_pred HHh------hCCEEEEcCCCccccc-HHHcCCCcEEEEccccc
Confidence 221 2899999999765322 37889999999998543
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0086 Score=45.75 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=47.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH-------HHHHHcCCCEE-E--eCCCCcHHHHHHH-HhC-CC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-------AVCKDLGADVC-I--NYKTEDFVARVKE-ETG-GK 207 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~-------~~~~~~g~~~~-~--~~~~~~~~~~~~~-~~~-~~ 207 (274)
++++|+|++|++|.++++.+.+.|. .|+++.|+++.. +.+++.+.... + |..+.+..+.+.+ ... ..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999998887 677777765432 22333343322 2 3322222222211 111 13
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.+++++|.
T Consensus 81 ~id~li~~ag~ 91 (180)
T smart00822 81 PLRGVIHAAGV 91 (180)
T ss_pred CeeEEEEcccc
Confidence 48999999973
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0084 Score=48.71 Aligned_cols=76 Identities=17% Similarity=0.148 Sum_probs=46.9
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHH----HHHcCCCE-E--EeCCCCcHHHHHHHH-h-CCCCccEE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAV----CKDLGADV-C--INYKTEDFVARVKEE-T-GGKGVDVI 212 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~----~~~~g~~~-~--~~~~~~~~~~~~~~~-~-~~~~~d~v 212 (274)
++|+|+++++|..+++.+.+.|++|+++.++. ++.+. +++.+... . .|..+.+..+.+.+. . ....+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999998887653 33322 22333322 1 233332222222221 1 11348999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01831 81 VLNAGI 86 (239)
T ss_pred EECCCC
Confidence 999873
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0041 Score=50.30 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=50.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE-EEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|||+||+|-+|..++..+.+.|.+|+...++......... ..... ..|..+.+..+.+.+. ..+|.||++++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~---~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEK---ANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHH---HTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccc---cCceEEEEeecc
Confidence 7899999999999999999999999888877765543332 22222 2244443333333332 258999999885
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.02 Score=47.77 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=67.0
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||........|+...---.|++++|.|.+.-+|.-++.++.+.|++|+++... ..+..+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------------t~~l~~ 197 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------------TRDLAA 197 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------------CCCHHH
Confidence 3455555555555443323469999999998888999999999999999875432 122222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.++ ..|+||-++|...+-. -++++++..++.+|...
T Consensus 198 ~~~------~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 198 HTR------QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred Hhh------hCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 222 2799999999755322 27899999999998654
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.017 Score=48.45 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=36.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 181 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~ 181 (274)
..+++++|.|+ ||.+.+++..+...|+ +++++.|+.++.+.+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999997 9999999999999998 7899999988876664
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.023 Score=41.76 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEe-CCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..+++++++.|. | .|..+++.+.+.|++|++++.+++..+.+++.+.+.+.+ ..+.+. ++. +++|+++..
T Consensus 14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-----~~y--~~a~liysi 84 (134)
T PRK04148 14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-----EIY--KNAKLIYSI 84 (134)
T ss_pred cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-----HHH--hcCCEEEEe
Confidence 345688999997 5 888777788889999999999999999888887665543 222221 112 347888876
Q ss_pred CChhhH
Q 024011 216 MGASYF 221 (274)
Q Consensus 216 ~g~~~~ 221 (274)
--...+
T Consensus 85 rpp~el 90 (134)
T PRK04148 85 RPPRDL 90 (134)
T ss_pred CCCHHH
Confidence 654443
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.017 Score=48.56 Aligned_cols=93 Identities=16% Similarity=0.083 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cC---C-CEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LG---A-DVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.+++++|.|+ |+.|.+++..+...|+ +++++.|+.++.+.+.+ +. . ..+... ++. .+.. ..+|+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~----~~~~--~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--SDL----AAAL--AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cch----Hhhh--CCCCEE
Confidence 4689999997 9999999999999998 89999999888766542 21 1 122111 111 1112 248999
Q ss_pred EECC--Chhh---HHHhhhccccCCEEEEEecC
Q 024011 213 LDCM--GASY---FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 213 i~~~--g~~~---~~~~~~~l~~~g~~v~~g~~ 240 (274)
||++ |... .+-..+.+++...++++-..
T Consensus 197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~ 229 (284)
T PRK12549 197 VHATPTGMAKHPGLPLPAELLRPGLWVADIVYF 229 (284)
T ss_pred EECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence 9995 3211 11122446666666666543
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.021 Score=43.50 Aligned_cols=83 Identities=19% Similarity=0.079 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|++++|.|+ |.+|..-++.+...|++|.+++ ++..+.+.+++.-. +.... +. ...-.++|+||-+.+.
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~~~~~--~~-----~~dl~~a~lViaaT~d 80 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-WKQKT--FS-----NDDIKDAHLIYAATNQ 80 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-EEecc--cC-----hhcCCCceEEEECCCC
Confidence 4789999997 9999999999999999999884 33334444443211 21111 10 0111358999999888
Q ss_pred hhHHHhhhccccCC
Q 024011 219 SYFQRNLGSLNIDG 232 (274)
Q Consensus 219 ~~~~~~~~~l~~~g 232 (274)
...+..+....+..
T Consensus 81 ~e~N~~i~~~a~~~ 94 (157)
T PRK06719 81 HAVNMMVKQAAHDF 94 (157)
T ss_pred HHHHHHHHHHHHHC
Confidence 77666655554333
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0082 Score=50.34 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=59.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE-EEeCCCCcHHHHHHH-HhCCCC-ccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKE-ETGGKG-VDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~g~ 218 (274)
+++|+|++|.+|..+++.+.+.|++|.+.+|+.++.. ..+... ..|.++.+......+ ...-.+ +|.++.+.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999999999999999877542 122222 234444332222221 111145 8999887763
Q ss_pred h-----hHHHhhhccccCC--EEEEEecC
Q 024011 219 S-----YFQRNLGSLNIDG--RLFIIGTQ 240 (274)
Q Consensus 219 ~-----~~~~~~~~l~~~g--~~v~~g~~ 240 (274)
. .....++.++..| +++.++..
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~ 106 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSAS 106 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeecc
Confidence 1 1233444444443 78777653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0056 Score=53.05 Aligned_cols=75 Identities=11% Similarity=0.112 Sum_probs=44.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEE-EecChhh--HHHHHHc--CCCE-E--EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAGSEEK--LAVCKDL--GADV-C--INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~-~~~~~~~--~~~~~~~--g~~~-~--~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+++||+|++|.+|..+++.+.+.|.++++ +++.... ...+... +... . .|..+.+ .+.+.....++|+|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~~D~V 78 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRA---ELARVFTEHQPDCV 78 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChH---HHHHHHhhcCCCEE
Confidence 47999999999999999999999987554 4443221 1112121 1111 1 2333322 33333333358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 79 ih~A~~ 84 (355)
T PRK10217 79 MHLAAE 84 (355)
T ss_pred EECCcc
Confidence 999974
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.015 Score=49.00 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=60.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHc----CCC-EEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
..++++||-.|+++ |..+..+++ .|+ +|++++.++..++.+++. +.. .+.... .+. ... ....+|
T Consensus 157 ~~~g~~VLDvGcGs--G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~~----~~~-~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS--GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IYL----EQP-IEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh--hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-ccc----ccc-cCCCce
Confidence 45789999999733 776666555 465 899999998877766531 211 111111 111 111 124699
Q ss_pred EEEECCChh----hHHHhhhccccCCEEEEEecCC
Q 024011 211 VILDCMGAS----YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 211 ~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+|+.+.... .+....+.++++|.++..|...
T Consensus 228 lVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 999876543 2456678899999999988653
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0059 Score=50.30 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=53.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+|||+|++|- |..++..+.+.|.+|+++.+++...+.+.+.+...+..... +- +.+.+.....++|+|||++-
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l-~~-~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGAL-DP-QELREFLKRHSIDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCC-CH-HHHHHHHHhcCCCEEEEcCC
Confidence 6999999776 99999888889999999999988777776665544432221 11 23445555567999999876
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.028 Score=46.83 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=66.0
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|....---.|++++|.|.+.-+|.-++.++...|+.|.+...... ++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~-------------------~l-- 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK-------------------DL-- 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH-------------------HH--
Confidence 345555555555533322236999999999779999999999999999987643221 11
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.+. ..|+|+-++|...+-. -++++++..++.+|...
T Consensus 195 --~~~~~--~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 195 --SFYTQ--NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred --HHHHH--hCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 11221 2799999999765422 35778998999998643
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0057 Score=51.24 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=43.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|.+|..+++.+...|.+|++++|+. .|..+ .+.+.+...+..+|+||++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~--------------~d~~~---~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ--------------LDLTD---PEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc--------------cCCCC---HHHHHHHHHhCCCCEEEECCcc
Confidence 479999999999999999999999999988751 12222 2233333333347999998874
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.033 Score=43.72 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=61.5
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCcc
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d 210 (274)
...+++|+++|..|++ .|..+..+++.. ..+|++++.++.. ...+...+ .|..+....+.+.+.....++|
T Consensus 27 ~~~i~~g~~VLDiG~G--tG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAA--PGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCC--CCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 4567899999999973 344555555544 3489999988754 11222222 2333333344555555556799
Q ss_pred EEEECC-----Ch-------------hhHHHhhhccccCCEEEEEec
Q 024011 211 VILDCM-----GA-------------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 211 ~vi~~~-----g~-------------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+|+... |. ..+..+.+.++++|+++....
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 999532 21 134566788999999998653
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.046 Score=43.83 Aligned_cols=97 Identities=21% Similarity=0.101 Sum_probs=64.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cCCCE--EEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~ 204 (274)
+...+++++++|-.|+ |.|..++.+++..+ .+|+.++.+++..+.+++ .+... +...+.... ..
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------~~ 141 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------YE 141 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------CC
Confidence 4567889999999986 56777777777665 599999999887766643 34322 222221111 11
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~ 237 (274)
....||.|+-..... ......+.|+++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 224699987665443 356677899999998875
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.025 Score=43.06 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=59.0
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
..+|+.....+..++...---.|++++|.|.+.-+|.-++.++.+.|+.|.......+.++
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~------------------- 74 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ------------------- 74 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH-------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc-------------------
Confidence 3455555555555544333357999999999999999999999999999988765432222
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ .+ +..|+||-++|...+- -.++++++..++++|...
T Consensus 75 ~----~~--~~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 75 E----IT--RRADIVVSAVGKPNLI-KADWIKPGAVVIDVGINY 111 (160)
T ss_dssp H----HH--TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred c----ee--eeccEEeeeecccccc-ccccccCCcEEEecCCcc
Confidence 1 11 1279999999875542 235788888888887654
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.014 Score=52.57 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=53.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH----H-cCCCEE----EeCCCCcHHHHHHHHhCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK----D-LGADVC----INYKTEDFVARVKEETGGK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~----~-~g~~~~----~~~~~~~~~~~~~~~~~~~ 207 (274)
-.|++|||+||+|.+|..++.-..+.+. ++++.++++.++.... + ++.... -|..+ .+.+.+...+.
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD---~~~~~~~~~~~ 324 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD---RDRVERAMEGH 324 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc---HHHHHHHHhcC
Confidence 3589999999999999887776666665 8888999888764443 2 221211 13333 33445555556
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||.++.-
T Consensus 325 kvd~VfHAAA~ 335 (588)
T COG1086 325 KVDIVFHAAAL 335 (588)
T ss_pred CCceEEEhhhh
Confidence 69999998874
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.015 Score=45.43 Aligned_cols=77 Identities=19% Similarity=0.307 Sum_probs=46.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCh-------hhHHHHHHcCCCEEE---eCCCCcHHHHHHHHh-CC-CC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE-------EKLAVCKDLGADVCI---NYKTEDFVARVKEET-GG-KG 208 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~-------~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~-~~-~~ 208 (274)
++||+|+.|++|..+++.+...+. +++++.|+. +.++.+++.|..... |..+.+....+.+.. .. ..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999998876 899999882 123455566664332 333333333333322 11 35
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
++.||.++|.
T Consensus 82 i~gVih~ag~ 91 (181)
T PF08659_consen 82 IDGVIHAAGV 91 (181)
T ss_dssp EEEEEE----
T ss_pred cceeeeeeee
Confidence 8999999985
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.036 Score=44.42 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=74.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcCCCEEEeCCC-CcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGADVCINYKT-EDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~~~~ 205 (274)
...+.+..+++|=.| .++|+.++.++.... .+++.+++++++.+.++ +.|.+..+..-. .+..+.+.+ ..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~-~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSR-LL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh-cc
Confidence 345566789999998 478999999998876 48999999999887765 456544322222 355555554 22
Q ss_pred CCCccEEEE-CCCh---hhHHHhhhccccCCEEEEEecCCC
Q 024011 206 GKGVDVILD-CMGA---SYFQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 206 ~~~~d~vi~-~~g~---~~~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
...||.||- +.-. ..++.+++.++++|-++.=+....
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNvl~~ 170 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNVLFG 170 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeecccC
Confidence 345998854 4433 247889999999998887766554
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.01 Score=63.27 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGS 173 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~ 173 (274)
+.+++++||+|+++|||..+++.+.+. |+++++++|+
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 457899999999999999998887766 7999999988
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0099 Score=52.00 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=49.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+..+++|||+|++|-+|..++..+.+.|.+|++++|..........+.. .....+..+. +.+..... ++|+||+++
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~-~~~~~Dl~d~-~~~~~~~~--~~D~Vih~A 93 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCH-EFHLVDLRVM-ENCLKVTK--GVDHVFNLA 93 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccc-eEEECCCCCH-HHHHHHHh--CCCEEEEcc
Confidence 3467899999999999999999999999999999975432110001111 2221222222 22333222 489999998
Q ss_pred C
Q 024011 217 G 217 (274)
Q Consensus 217 g 217 (274)
+
T Consensus 94 a 94 (370)
T PLN02695 94 A 94 (370)
T ss_pred c
Confidence 5
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0066 Score=51.50 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=45.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|||+|++|.+|..+++.+...|. +|+++++..... .+.++..... .+.++.+..+.+.+. .-.++|+||++++.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKG-AFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhh-ccCCCCEEEECccc
Confidence 58999999999999999999998 688877654322 1222222111 223333333333321 11359999999873
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.052 Score=47.65 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=64.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHH-HHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.++++||.|+ |-+|..+++.+...|. ++++..|+.++.+. +++++...+. .+++...... +|+||-+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~-------l~el~~~l~~--~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA-------LEELLEALAE--ADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec-------HHHHHHhhhh--CCEEEEe
Confidence 36889999998 9999999999999996 88888999988754 4578844321 2334444433 8999999
Q ss_pred CChhh----HHHhhhccccCC--EEEEEecCC
Q 024011 216 MGASY----FQRNLGSLNIDG--RLFIIGTQG 241 (274)
Q Consensus 216 ~g~~~----~~~~~~~l~~~g--~~v~~g~~~ 241 (274)
+|.+. .....+.++..- -+++++.+-
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 88753 223334444332 466666654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.012 Score=49.95 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=44.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CeEEEEecCh--hhHHHHHHcC---CCEEE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSE--EKLAVCKDLG---ADVCI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~--~~~~~~~~~g---~~~~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+++|+|++|.+|..+++.+.+.| .+|++.++.. .+.+.+.++. ....+ |..+.+ .+.+......+|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRE---LVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHH---HHHHHHhhcCCCEE
Confidence 48999999999999999888876 6888877532 1222222221 11222 333332 23333322348999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 78 i~~a~~ 83 (317)
T TIGR01181 78 VHFAAE 83 (317)
T ss_pred EEcccc
Confidence 999974
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.038 Score=46.12 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=67.4
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||........+....---.|++++|.|.+.-+|.-++.++...|+.|+++..... +..+
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~-------------------~l~~ 203 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD-------------------DLKK 203 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC-------------------CHHH
Confidence 455555555555543322237999999999888999999999999999988763221 1111
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+ +..|++|.++|.+.+- --++++++..++.+|...
T Consensus 204 ----~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 204 ----YT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGITK 239 (287)
T ss_pred ----HH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEecccc
Confidence 22 2379999999976532 345889999999998753
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.032 Score=46.88 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=65.6
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
.+||...+.+..|....---.|++++|+|.++.+|.-++.++.+.|+.|+++. |+.+ .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------l- 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------L- 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC--------------------H-
Confidence 35565555555554433234699999999999999999999999999999984 4431 1
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.. +..|+|+-+.|...+-. -.+++++..++.+|...
T Consensus 196 ---~e~~--~~ADIVIsavg~~~~v~-~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 ---PAVC--RRADILVAAVGRPEMVK-GDWIKPGATVIDVGINR 233 (296)
T ss_pred ---HHHH--hcCCEEEEecCChhhcc-hheecCCCEEEEcCCcc
Confidence 1111 12789998888754211 13478888888888654
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.017 Score=51.77 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=31.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
..++++||+||+|.+|..+++.+...|++|+++++
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 35689999999999999999999999999999763
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0026 Score=53.36 Aligned_cols=67 Identities=22% Similarity=0.188 Sum_probs=45.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|||+|++|.+|..+++.+.+.|++|++++|+.+..+..... ...+..... ..+.. .++|+||++++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~----~~~~~--~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE---GYKPWAPLA----ESEAL--EGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce---eeecccccc----hhhhc--CCCCEEEECCCC
Confidence 58999999999999999999999999999987754322111 111111111 11222 358999999974
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.026 Score=38.87 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=55.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcC---CeEEEE-ecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG---VRVFVT-AGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g---~~v~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++.|.|+ |.+|.++++-+.+.| .+++++ .|++++.+.+. +++.... . .+..+.+.+ .|+||.+.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~-~---~~~~~~~~~------advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQAT-A---DDNEEAAQE------ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEE-S---EEHHHHHHH------TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccc-c---CChHHhhcc------CCEEEEEE
Confidence 4667786 999999999999999 899955 99999987775 4553322 1 122333322 79999999
Q ss_pred ChhhHHHhhhcc---ccCCEEEEE
Q 024011 217 GASYFQRNLGSL---NIDGRLFII 237 (274)
Q Consensus 217 g~~~~~~~~~~l---~~~g~~v~~ 237 (274)
-...+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 876655555443 344444443
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.076 Score=43.03 Aligned_cols=99 Identities=11% Similarity=0.219 Sum_probs=61.4
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe---EEEEecC----hhhH--------HHHHHcCCCEEEeCCC
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR---VFVTAGS----EEKL--------AVCKDLGADVCINYKT 193 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~---v~~~~~~----~~~~--------~~~~~~g~~~~~~~~~ 193 (274)
.+++....--.+++++|.|+ |+.|.+++..+...|++ +++++|+ .++. +.+++.+... . .
T Consensus 14 ~al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~ 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G 88 (226)
T ss_pred HHHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c
Confidence 34433332245789999998 99999999999999985 9999988 3432 2223332211 1 1
Q ss_pred CcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEe
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g 238 (274)
.++.+.+ . ++|++|++++... ....++.|.++..++.+.
T Consensus 89 ~~l~~~l----~--~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 GTLKEAL----K--GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred CCHHHHH----h--cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 1232333 2 3899999997332 245567777766666554
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.015 Score=50.43 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=38.0
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
|+|--++.+..+ .+++++|+|++|-+|..++..+...|.+|+++++...
T Consensus 2 ~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred chhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 345444333333 3578999999999999999999999999999987543
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.016 Score=49.85 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=46.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHcCC-C-EE--EeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGA-D-VC--INYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~g~-~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++||+|++|.+|..+++.+.+.|.+|+++++..+.. ..+.+.+. . .. .|..+.+. +.+.....++|+||
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~d~vv 78 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL---LTEILHDHAIDTVI 78 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHH---HHHHHhcCCCCEEE
Confidence 689999999999999999999999999887542211 11222221 1 12 23333222 33323223599999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 79 h~a~~ 83 (338)
T PRK10675 79 HFAGL 83 (338)
T ss_pred ECCcc
Confidence 99863
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.054 Score=43.18 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=66.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|++++|.|+ |.+|..-++.+...|++|++++.... .++.+.+.+.-...... .. ... . .++++||-+.+
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~-~~-~~d----l--~~~~lVi~at~ 78 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARC-FD-ADI----L--EGAFLVIAATD 78 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCC-CC-HHH----h--CCcEEEEECCC
Confidence 4789999997 99999999999999999999876543 34444444422222111 11 111 1 35899999998
Q ss_pred hhhHH-HhhhccccCCEEEEEecCCCCccccchhhHhhcc-eEEEEe
Q 024011 218 ASYFQ-RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGI 262 (274)
Q Consensus 218 ~~~~~-~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~ 262 (274)
....+ ......+..|..+.+..... ...+.....+.++ ++|.-+
T Consensus 79 d~~ln~~i~~~a~~~~ilvn~~d~~e-~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 79 DEELNRRVAHAARARGVPVNVVDDPE-LCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CHHHHHHHHHHHHHcCCEEEECCCcc-cCeEEEeeEEEcCCEEEEEE
Confidence 76443 34444455565554433222 2344444444444 444433
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.054 Score=40.27 Aligned_cols=96 Identities=16% Similarity=0.072 Sum_probs=65.1
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++........++...---.|++++|+|.+..+|.-++.++.+.|++|..+.++...++ +.
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------~~ 68 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------SK 68 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH-------------------HH
Confidence 44444444444544332346999999999999999999999999999998875432221 11
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ +..|+|+-++|...+ ---++++++-.++.+|...
T Consensus 69 v------~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 69 V------HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred H------hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 2 127888888886532 2246788888888777543
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0056 Score=48.64 Aligned_cols=78 Identities=19% Similarity=0.355 Sum_probs=51.3
Q ss_pred CEEEEecCCchHHHHHHHHHH-HcCCeEEEEe-cChhh-HHHHHHcC---C-CEE--EeCCC----CcHHHHHHHHhCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTA-GSEEK-LAVCKDLG---A-DVC--INYKT----EDFVARVKEETGGK 207 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~-~~~~~-~~~~~~~g---~-~~~--~~~~~----~~~~~~~~~~~~~~ 207 (274)
++++|+|+..|||+-+++.+. ..|.++++.. |+.++ .+++.... . -++ +|.+. +++.+++.+..+..
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 569999999999988877665 5577665554 55666 33333221 1 122 23332 45666777777778
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
|.|++++|+|.
T Consensus 84 GlnlLinNaGi 94 (249)
T KOG1611|consen 84 GLNLLINNAGI 94 (249)
T ss_pred CceEEEeccce
Confidence 89999999995
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.04 Score=43.10 Aligned_cols=118 Identities=10% Similarity=0.029 Sum_probs=74.0
Q ss_pred cCcchHHHHHHHHHhhcCC----------CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE
Q 024011 119 AFPEVACTVWSTVFMTSHL----------SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 188 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~----------~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~ 188 (274)
.+||........|... ++ -.|++++|.|.+.-+|.=++.++.+.|+.|++++.+.-.. ....+....
T Consensus 32 ~~PCTp~avi~lL~~~-~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~~~~~~h 108 (197)
T cd01079 32 ILPCTPLAIVKILEFL-GIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTRGESIRH 108 (197)
T ss_pred ccCCCHHHHHHHHHHh-CCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--ccccccccc
Confidence 4566666665555433 22 4699999999999999999999999999999886443221 111010000
Q ss_pred EeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
......+....+.+... ..|+||-++|...+.---++++++..++.+|...
T Consensus 109 s~t~~~~~~~~l~~~~~--~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 109 EKHHVTDEEAMTLDCLS--QSDVVITGVPSPNYKVPTELLKDGAICINFASIK 159 (197)
T ss_pred ccccccchhhHHHHHhh--hCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc
Confidence 00000121112333332 3899999999876533357899999999998754
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.016 Score=52.11 Aligned_cols=70 Identities=27% Similarity=0.349 Sum_probs=48.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hH----HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KL----AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.+++++|+|+ |.+|+.+++.+...|++|++++++.. .+ +.+.+.+.... ..+..+ +.. .++|+||
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~-~~~~~~------~~~--~~~d~vv 73 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELV-LGEYPE------EFL--EGVDLVV 73 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEE-eCCcch------hHh--hcCCEEE
Confidence 4789999998 66999999999999999999998742 22 33444554432 222221 111 2489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
.++|.
T Consensus 74 ~~~g~ 78 (450)
T PRK14106 74 VSPGV 78 (450)
T ss_pred ECCCC
Confidence 99985
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.011 Score=52.95 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=48.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|+ |++|+++++.+++.|++|++.+++... .+.+.+.|.......+..+ +. ..++|+||.
T Consensus 4 ~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~----~~~~d~vV~ 74 (447)
T PRK02472 4 QNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLE----LL----DEDFDLMVK 74 (447)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHH----Hh----cCcCCEEEE
Confidence 4788999998 569999999999999999999865432 2344555654432222211 11 114899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
+.|.
T Consensus 75 s~gi 78 (447)
T PRK02472 75 NPGI 78 (447)
T ss_pred CCCC
Confidence 9875
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.094 Score=45.02 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=66.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHH-HHcCC-eEEEEecChhhHHHHHH-----cCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVCKD-----LGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~-~~~g~-~v~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+..++++|+|+ |+.+...+..+ ...++ +|.+++|++++.+.+.+ ++..... . .+..+.+ ...|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~-~--~~~~~~~------~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV-V--NSADEAI------EEAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE-e--CCHHHHH------hcCC
Confidence 45688999997 99998777654 44566 88888999888755432 2332211 1 2222222 2389
Q ss_pred EEEECCChhhHHHhhhccccCCEEEEEecCCCCccccch
Q 024011 211 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249 (274)
Q Consensus 211 ~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~ 249 (274)
+|+.+.......-. ++++++-.++.+|.....+.+++.
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 99999986543333 888998899999987654555555
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.027 Score=46.97 Aligned_cols=91 Identities=12% Similarity=0.200 Sum_probs=58.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
+...+++++|.|+ ||.+.+++..++..|+ +++++.|+.++.+.+.+ ++.. +.+.+ ....+|+||
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---------~~~~~----~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---------WRPDL----GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---------chhhc----ccccCCEEE
Confidence 3445678999997 9999999999999998 69999999988776643 3211 00111 112489999
Q ss_pred ECCChhhH--------HHhhhccccCCEEEEEecC
Q 024011 214 DCMGASYF--------QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 214 ~~~g~~~~--------~~~~~~l~~~g~~v~~g~~ 240 (274)
|+...... +-....+++...++++-..
T Consensus 184 NaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~ 218 (272)
T PRK12550 184 NVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL 218 (272)
T ss_pred ECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence 98752110 1112345666666666543
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.013 Score=49.80 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=45.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHc---CCCEEE--eCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDL---GADVCI--NYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~---g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++||+|++|.+|..+++.+.+.|.+|+++++.... .+.+... +.-..+ |..+.+. +.+.....++|+||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDREL---LDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHH---HHHHHHhCCCcEEEEC
Confidence 47999999999999999999999999887653322 1112111 111122 3333222 2222222359999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 78 ag~ 80 (328)
T TIGR01179 78 AGL 80 (328)
T ss_pred ccc
Confidence 974
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.044 Score=46.09 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=65.3
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||........|....---.|+++.+.|.++-+|.-++.++.+.|++|++..+.... ..
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~-------------------l~- 197 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD-------------------AK- 197 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC-------------------HH-
Confidence 4556655555555444333469999999997899999999999999999998654321 11
Q ss_pred HHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.. +..|+||-++|... +.. .+++++..++.+|...
T Consensus 198 ---e~~--~~ADIVIsavg~~~~v~~--~~ik~GaiVIDvgin~ 234 (301)
T PRK14194 198 ---ALC--RQADIVVAAVGRPRLIDA--DWLKPGAVVIDVGINR 234 (301)
T ss_pred ---HHH--hcCCEEEEecCChhcccH--hhccCCcEEEEecccc
Confidence 111 12688888888654 222 2378888888887543
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.057 Score=46.13 Aligned_cols=99 Identities=25% Similarity=0.201 Sum_probs=66.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+...++++++||..|+ |.|..++.+++..+. +|+.++.+++.++.++ +.+.+.+.... .+..+... ..
T Consensus 74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD~~~~~~---~~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GDGYYGVP---EF 147 (322)
T ss_pred HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CChhhccc---cc
Confidence 4456788999999996 469999998887764 6999999988765554 35554332211 12211111 11
Q ss_pred CCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
..+|+|+.+.+... ....++.++++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 35999999887644 45667889999998874
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0071 Score=50.90 Aligned_cols=60 Identities=25% Similarity=0.363 Sum_probs=38.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|-+|.++.+.++..|.+++.+.|+ -+|..+.+....+.+ ...+|+||+|++.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------~~dl~d~~~~~~~~~---~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS--------------DLDLTDPEAVAKLLE---AFKPDVVINCAAY 61 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------CS-TTSHHHHHHHHH---HH--SEEEE----
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------hcCCCCHHHHHHHHH---HhCCCeEecccee
Confidence 69999999999999999999999999998766 122222222222222 2237999999874
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.015 Score=46.50 Aligned_cols=97 Identities=23% Similarity=0.231 Sum_probs=61.2
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~ 204 (274)
+...+++|+++|-.|+ |.|+.++-+++..|. +|+.+++.++-.+.++ .++.+.+ ...+... -+.
T Consensus 66 ~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~------g~~ 137 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE------GWP 137 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG------TTG
T ss_pred HHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh------ccc
Confidence 5667999999999996 456777777766554 7888898887655544 4454322 2222110 011
Q ss_pred CCCCccEEEECCChhhH-HHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~ 237 (274)
....||.++-+++.... ...++.|+++|+++..
T Consensus 138 ~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 138 EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 12459999998887553 5667899999999985
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.04 Score=52.14 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=47.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCh--hhHHHHHHc--CC-CEEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSE--EKLAVCKDL--GA-DVCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~--~~~~~~~~~--g~-~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.+++|||+||+|.+|..+++.+.+. +.+|+++++.. +....+... .. -..+ |..+.+. +.+.....++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~---~~~~~~~~~~ 81 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADL---VNYLLITEGI 81 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHH---HHHHHhhcCC
Confidence 4689999999999999999999877 67899888642 222222211 11 1122 3233222 2222222469
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||++++.
T Consensus 82 D~ViHlAa~ 90 (668)
T PLN02260 82 DTIMHFAAQ 90 (668)
T ss_pred CEEEECCCc
Confidence 999999984
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.037 Score=46.57 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=30.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~ 175 (274)
.+++++|.|+ ||.+.+++..+...|+ +++++.|+++
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5789999997 8889998888888897 8999999853
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.019 Score=49.27 Aligned_cols=93 Identities=16% Similarity=0.177 Sum_probs=61.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-eEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
-.+++++|+||+|.+|..+++.+.. .|. +++++.|+.+++..+. +++...+ . .+.+... ..|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-----~----~l~~~l~--~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-----L----SLEEALP--EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-----H----hHHHHHc--cCCEEEE
Confidence 3578999999999999999999975 464 8999999888776654 3321111 1 1223333 3899999
Q ss_pred CCChhhH-HHhhhccccCCEEEEEecCC
Q 024011 215 CMGASYF-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 215 ~~g~~~~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
+++.... ....+.+++.-.+++++.+.
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence 9986331 12224456666777777664
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.042 Score=42.70 Aligned_cols=78 Identities=22% Similarity=0.181 Sum_probs=48.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cC--CC-EE--EeCCCCcHHHHHH-HHh-CCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG--AD-VC--INYKTEDFVARVK-EET-GGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g--~~-~~--~~~~~~~~~~~~~-~~~-~~~~~d~vi 213 (274)
+++|+|++ ++|..+++.+.+.|++|++.+|+.++.+.+.. ++ .. .. .|..+.+....+. ... ..+++|.+|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999996 56666888888899999999998877665543 32 11 11 2454433332222 221 123589999
Q ss_pred ECCChhh
Q 024011 214 DCMGASY 220 (274)
Q Consensus 214 ~~~g~~~ 220 (274)
+.+-...
T Consensus 81 ~~vh~~~ 87 (177)
T PRK08309 81 AWIHSSA 87 (177)
T ss_pred Eeccccc
Confidence 8775443
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0071 Score=45.56 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=57.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC-------C-CCcHHHHHHHHhCCCCccEEEE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-------K-TEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-------~-~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
|+|.|+ |++|...+..+++.|.+|.++.|++ +.+.+++.|....... . ..... .. ....+|+||-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SA--DAGPYDLVIV 73 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GH--HHSTESEEEE
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hh--ccCCCcEEEE
Confidence 578997 9999999999999999999999988 7777765443221111 0 00000 01 1245999999
Q ss_pred CCChhhHHHhh----hccccCCEEEEEec
Q 024011 215 CMGASYFQRNL----GSLNIDGRLFIIGT 239 (274)
Q Consensus 215 ~~g~~~~~~~~----~~l~~~g~~v~~g~ 239 (274)
|+-......++ ..+.+...++.+..
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence 99775544443 44555656666644
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.012 Score=49.74 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=42.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+|||+|++|-+|..+++.+...| +|+++++.... ...|..+. +.+.+...+.++|+||++++.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~----------~~~Dl~d~---~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD----------YCGDFSNP---EGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccccc----------ccCCCCCH---HHHHHHHHhcCCCEEEECCcc
Confidence 69999999999999999998888 78888765320 11122222 233333333458999999874
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.047 Score=44.23 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=55.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH--cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.++|.|+ |.+|..+++.+.+.|.+|+++++++++.+...+ +.. +++..+..+ . ...+..+-..+|+++-+.|.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~-~-~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD-E-DVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC-H-HHHHhcCCCcCCEEEEeeCC
Confidence 36789997 999999999999999999999999998876332 443 333222222 1 22333344568999999997
Q ss_pred hhHHHh
Q 024011 219 SYFQRN 224 (274)
Q Consensus 219 ~~~~~~ 224 (274)
...+..
T Consensus 77 d~~N~i 82 (225)
T COG0569 77 DEVNSV 82 (225)
T ss_pred CHHHHH
Confidence 654433
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.044 Score=46.63 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=60.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++|.|.|+ |.+|.+.+..++..|. +|+++++++++.+.+++.+...... .+..+ .. ...|+||.|+..
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~----~~--~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAAE----AV--KGADLVILCVPV 76 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHH----Hh--cCCCEEEECCCH
Confidence 57999996 9999999999998885 8999999998888887776422111 11111 11 248999999886
Q ss_pred hhH----HHhhhccccCCEEEEEec
Q 024011 219 SYF----QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~~----~~~~~~l~~~g~~v~~g~ 239 (274)
... ......++++..+++++.
T Consensus 77 ~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 433 233344566666666554
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.078 Score=40.57 Aligned_cols=44 Identities=23% Similarity=0.132 Sum_probs=37.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~ 185 (274)
.+|.+.|. |.+|..+++-+.+.|++|++.+|++++.+.+.+.+.
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTE
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhh
Confidence 36888996 999999999999999999999999999988887763
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.04 Score=43.93 Aligned_cols=98 Identities=19% Similarity=0.080 Sum_probs=63.8
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcCCC---EEEeCCCCcHHHHHHHH
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEE 203 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~ 203 (274)
+...+++++++|-.|+ |.|..++.+++..+ .+|+.++.+++..+.++ ..+.. .+...+..+. +
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~--- 137 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L--- 137 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C---
Confidence 4556788999999986 55777777776653 58999999988766554 33322 2222222111 1
Q ss_pred hCCCCccEEEECCChh-hHHHhhhccccCCEEEEEe
Q 024011 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g 238 (274)
.....+|.|+-+.... ..+...+.|+++|+++..-
T Consensus 138 ~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 138 EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 1123599998776643 3466778999999998753
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.016 Score=46.97 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=49.9
Q ss_pred CCCEEEEecCC----------------chHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHH
Q 024011 139 PGESFLVHGGS----------------SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 202 (274)
Q Consensus 139 ~g~~vlI~Ga~----------------g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 202 (274)
.|++|||+++. |-+|..+++.+...|++|++++............+.....-....+..+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 47888898765 89999999999999999998875322110000001111111111233445555
Q ss_pred HhCCCCccEEEECCChhh
Q 024011 203 ETGGKGVDVILDCMGASY 220 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~~~ 220 (274)
.....++|+||.++....
T Consensus 82 ~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HhcccCCCEEEECccccc
Confidence 554446899999887543
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.014 Score=46.89 Aligned_cols=97 Identities=21% Similarity=0.119 Sum_probs=62.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~ 204 (274)
+...+++++++|-.|+ |.|..+..+++..+. +|+.++.+++..+.++ +.+.+.+ ...+..+ . ..
T Consensus 71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~---~---~~ 142 (215)
T TIGR00080 71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQ---G---WE 142 (215)
T ss_pred HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCccc---C---Cc
Confidence 4556889999999986 567777777777654 6999999988776654 3443222 2112111 0 11
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~ 237 (274)
....||.|+-+.... ......+.|+++|+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 123599888655433 345677899999998865
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.063 Score=43.29 Aligned_cols=95 Identities=22% Similarity=0.238 Sum_probs=60.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-+|.+||=.|++|| .+ .+-+.+.|++|+.++.+++.++.++.-....- +++... ..+++... ++.||+|+..
T Consensus 58 l~g~~vLDvGCGgG--~L-se~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~-~~edl~~~--~~~FDvV~cm 131 (243)
T COG2227 58 LPGLRVLDVGCGGG--IL-SEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQA-TVEDLASA--GGQFDVVTCM 131 (243)
T ss_pred CCCCeEEEecCCcc--Hh-hHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhh-hHHHHHhc--CCCccEEEEh
Confidence 47889999998664 44 45555678999999999998888763222111 233322 23333322 2469999864
Q ss_pred CC-----h--hhHHHhhhccccCCEEEEEe
Q 024011 216 MG-----A--SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 216 ~g-----~--~~~~~~~~~l~~~g~~v~~g 238 (274)
-= . ..+..+.++++|+|.+++.-
T Consensus 132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 132 EVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred hHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 22 1 13566888999999887653
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.23 Score=35.37 Aligned_cols=92 Identities=18% Similarity=0.142 Sum_probs=61.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhH-
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF- 221 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~- 221 (274)
++|.|. |.+|..+++.+++.+.++++++++++..+.+++.+.. ++..+..+. +.+.+ .+-..++.++-+.+....
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~-~~l~~-a~i~~a~~vv~~~~~d~~n 76 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP-EVLER-AGIEKADAVVILTDDDEEN 76 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH-HHHHH-TTGGCESEEEEESSSHHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh-hHHhh-cCccccCEEEEccCCHHHH
Confidence 578896 8999999999999777999999999999999888844 444443332 12222 223458888888776432
Q ss_pred ---HHhhhccccCCEEEEEe
Q 024011 222 ---QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 222 ---~~~~~~l~~~g~~v~~g 238 (274)
-..++.+.+..+++...
T Consensus 77 ~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 77 LLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEEE
Confidence 22334455566666554
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.075 Score=44.20 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=67.8
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|+...---.|++++|.|.+.-+|.=++.++.+.++.|++..+... ++.+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~-------------------~l~~ 197 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK-------------------NLKE 197 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence 345555555555544332346999999999999999999999999999987763211 2211
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|...+ ---++++++..++.+|...
T Consensus 198 ~~~------~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 198 VCK------KADILVVAIGRPKF-IDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHh------hCCEEEEcCCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 121 27999999997654 2246789999999998654
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.1 Score=43.46 Aligned_cols=97 Identities=10% Similarity=0.136 Sum_probs=67.5
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+....|....---.|++++|.|.+.-+|.=++.++...++.|++...... +..+
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~-------------------~l~~ 195 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTR-------------------NLKQ 195 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCC-------------------CHHH
Confidence 345555555555544332346999999999999999999999999999887643211 1222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|.+.+ ---++++++..++.+|...
T Consensus 196 ~~~------~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 196 LTK------EADILVVAVGVPHF-IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHh------hCCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 221 27999999997654 2246888999999998764
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.032 Score=48.23 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=44.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCe-EEEEecCh--hhHHHHHHcC--CC-EEE--eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE--EKLAVCKDLG--AD-VCI--NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~--~~~~~~~~~g--~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++||+|++|.+|..++..+...|.+ ++.+++.. ...+.+..+. .. ..+ |..+. +.+.+.....++|+||
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDR---AELDRIFAQHQPDAVM 78 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCH---HHHHHHHHhcCCCEEE
Confidence 5899999999999999999999875 54444422 1223333322 11 122 33332 2233333223589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 79 h~A~~ 83 (352)
T PRK10084 79 HLAAE 83 (352)
T ss_pred ECCcc
Confidence 99974
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.083 Score=42.60 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=56.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh-------hH-HH---------------HHHcCCCEEEeCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE-------KL-AV---------------CKDLGADVCINYKTED 195 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~-------~~-~~---------------~~~~g~~~~~~~~~~~ 195 (274)
..+|+|.|. ||+|..++..+.+.|+ ++.+++.+.- ++ .. .+++.+.--++..+.-
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 466889997 9999999999999998 7777764311 11 11 1122221111111111
Q ss_pred H-HHHHHHHhCCCCccEEEECCChhh--HHHhhhccccCCEEEEEecCC
Q 024011 196 F-VARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 196 ~-~~~~~~~~~~~~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ .+.+.+.+. .++|+|||+.-.-. ...+..+.+.+-.++..+..+
T Consensus 109 ~t~en~~~~~~-~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLS-KGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhc-CCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 1 222333343 37999999987633 223333455555666665544
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.1 Score=43.53 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=66.9
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|....---.|++++|.|.+.-+|.-++.++.+.++.|++..... .+..+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------------~~l~~ 197 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------------KNLAE 197 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------------hhHHH
Confidence 34555555555554332234699999999999999999999999999998765321 11111
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.++ ..|+||-++|...+ -.-++++++..++.+|...
T Consensus 198 ~~~------~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 198 LTK------QADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHH------hCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 221 27999999987653 2246778888999998764
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.016 Score=51.89 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+++.+|+|+|++|-+|..+++.+...|.+|+++++.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456889999999999999999999999999999875
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.064 Score=42.67 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=29.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS 173 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~ 173 (274)
+.+|+|.|+ |++|..+++.+.+.|. ++.+++.+
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 467999997 9999999999999998 88888865
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.11 Score=42.36 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=67.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHHHhC-
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETG- 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~- 205 (274)
...+..+.+++|-.|. +.|..+..+++.. +.+++.++.+++..+.++ +.|...-+.....+..+.+.+...
T Consensus 62 ~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~ 139 (234)
T PLN02781 62 MLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNN 139 (234)
T ss_pred HHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhC
Confidence 3455667889999985 5677666666654 359999999988776665 344332222222333333333321
Q ss_pred --CCCccEEEECCCh----hhHHHhhhccccCCEEEEEecC
Q 024011 206 --GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 --~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...||+||-.+.. ..++.+++.++++|.++.-+..
T Consensus 140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn~l 180 (234)
T PLN02781 140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDNTL 180 (234)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 2469999866542 2367788999999998865544
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.11 Score=45.65 Aligned_cols=89 Identities=18% Similarity=0.126 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.||+.+++.++..|++|++.+++....+..+..+.... .++ .+... ..|+|+.+...
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~-----~~l----~ell~--~aDvV~l~lPl 258 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH-----VSF----DSLVS--VCDVVTIHCPL 258 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec-----CCH----HHHhh--cCCEEEEcCCC
Confidence 4789999996 999999999999999999999987533333333332110 111 11121 25777666653
Q ss_pred hh-----H-HHhhhccccCCEEEEEec
Q 024011 219 SY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
.. + ...+..|+++..+|.++.
T Consensus 259 t~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 259 HPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 11 1 234556666665555543
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.09 Score=44.68 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=66.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-eEEEEecChhhHHHHH-HcC---CCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLG---ADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
...++++|+|+ |..|.+.++.+.. .+. ++.+..|+.++.+.+. ++. .... ..+..+.+ ...|+
T Consensus 123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av------~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIP------EAVDL 191 (304)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHh------hcCCE
Confidence 45688999996 9999998888864 565 7999999988765543 332 2211 12232222 24899
Q ss_pred EEECCChhh--HHHhhhccccCCEEEEEecCCCCccccchh
Q 024011 212 ILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250 (274)
Q Consensus 212 vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 250 (274)
|+.+..+.. +.. .++++-.++.+|.....+.+++..
T Consensus 192 VitaT~s~~Pl~~~---~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 192 VVTATTSRTPVYPE---AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred EEEccCCCCceeCc---cCCCCCEEEecCCCCCCcccCCHH
Confidence 999987643 332 378888999999876555566644
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.037 Score=47.81 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=30.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~ 175 (274)
+|+|+|++|.+|..+++.+.+.| .+|+++.|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 48999999999999999999888 78999998765
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.083 Score=44.04 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=68.3
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||........+....---.|++++|.|.+.-+|.-++.++.+.++.|++...... +..+
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~-------------------~l~~ 198 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQ-------------------NLPS 198 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence 355555555555544333346999999999999999999999999999987763221 2221
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.. +..|+||-++|...+- .-++++++..++++|...
T Consensus 199 ~~------~~ADIvIsAvGk~~~i-~~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 199 IV------RQADIIVGAVGKPEFI-KADWISEGAVLLDAGYNP 234 (284)
T ss_pred HH------hhCCEEEEeCCCcCcc-CHHHcCCCCEEEEecCcc
Confidence 22 1279999999976542 257889999999998754
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.084 Score=43.94 Aligned_cols=77 Identities=18% Similarity=0.075 Sum_probs=43.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEec-----ChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAG-----SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
+++||+|+.|-||...+........ +|++++. +.+.+..+.....-..+..+-.+ .+.+.+......+|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D-~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICD-RELVDRLFKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccC-HHHHHHHHHhcCCCeEE
Confidence 3689999999999999988876654 5677663 22223222222222222222222 23333333333589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+.+..
T Consensus 80 hfAAE 84 (340)
T COG1088 80 HFAAE 84 (340)
T ss_pred Eechh
Confidence 87764
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.12 Score=43.15 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=67.4
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+....|....---.|++++|.|.+.-+|.=++.++.+.++.|++..... .++.+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------------~~l~~ 196 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------------KDLPQ 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------------CCHHH
Confidence 35566555555554333234699999999999999999999999999998765321 12222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|...+ ---++++++..++.+|...
T Consensus 197 ~~~------~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 197 VAK------EADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred HHh------hCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence 222 27999999997654 2246788988999998764
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.1 Score=43.46 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=66.6
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..|+........+....---.|++++|.|.+.-+|.-++.++...|++|.+..++...
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~---------------------- 188 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN---------------------- 188 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH----------------------
Confidence 3455555555555443323469999999998899999999999999999887754321
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+.+. ..|+||.++|...+ -.-++++++..++++|...
T Consensus 189 -L~~~~~--~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 189 -LKAELR--QADILVSAAGKAGF-ITPDMVKPGATVIDVGINQ 227 (279)
T ss_pred -HHHHHh--hCCEEEECCCcccc-cCHHHcCCCcEEEEeeccc
Confidence 122221 27999999985532 1234578999999998763
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.13 Score=44.65 Aligned_cols=93 Identities=22% Similarity=0.206 Sum_probs=56.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC----C-CEEEe--CCCCcHHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----A-DVCIN--YKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g----~-~~~~~--~~~~~~~~~~~~~~~~~~~d~ 211 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++...... ..++ . ....+ ....++ .+.... .|+
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L----~ell~~--aDi 229 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDI----YEFAGE--ADI 229 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh-hhhccccccccccccccCcccCH----HHHHhh--CCE
Confidence 4799999996 999999999999999999999886332111 1100 0 00000 011122 222222 688
Q ss_pred EEECCChhh------HHHhhhccccCCEEEEEec
Q 024011 212 ILDCMGASY------FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 212 vi~~~g~~~------~~~~~~~l~~~g~~v~~g~ 239 (274)
|+.+..... -...+..|+++..+|.++.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 888765321 2456777888777777764
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.15 Score=36.48 Aligned_cols=99 Identities=17% Similarity=0.271 Sum_probs=64.5
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH----HcCCC--EEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~~~ 205 (274)
....++++++++-.|+ |.|..+..+++..+ .+++.++.++..++.++ ..+.. .....+.... ....
T Consensus 13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LEDS-- 85 (124)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Chhh--
Confidence 3445677889999986 44888899888764 69999999988776654 23322 2222221111 1111
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEEe
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g 238 (274)
...+|+|+...+. ..+..+.+.|+++|+++...
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 1359999876543 23677888999999998764
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.026 Score=44.70 Aligned_cols=96 Identities=16% Similarity=0.086 Sum_probs=58.2
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
....++.++|-.|+ |.|..+..++++ |++|++++.+++.++.+++ .+... +.....++. +..-...+|
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~d~~----~~~~~~~fD 97 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVVDLN----NLTFDGEYD 97 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEecChh----hCCcCCCcC
Confidence 34556788999986 457777777764 8999999999887766553 22211 111111111 111123499
Q ss_pred EEEECCCh---------hhHHHhhhccccCCEEEEEe
Q 024011 211 VILDCMGA---------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 211 ~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g 238 (274)
+|+.+..- ..+....+.|+++|.++.+.
T Consensus 98 ~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 98 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99876442 12456677899999965543
|
|
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.11 Score=41.80 Aligned_cols=115 Identities=12% Similarity=0.025 Sum_probs=67.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|||.|+ |.++.-=++.+...|++|.+++..-. .++.+.+.+.-.... . .+... + . .++++||-+++
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r--~~~~~--d-l--~g~~LViaATd 94 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-G--NYDKE--F-I--KDKHLIVIATD 94 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-C--CCChH--H-h--CCCcEEEECCC
Confidence 4789999997 88998888888889999999875432 333333333222221 1 11111 1 1 35899999998
Q ss_pred hhhHHHhhhccc-cCCEEEEEecCCCCccccchhhHhhcc-eEEEEee
Q 024011 218 ASYFQRNLGSLN-IDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGIV 263 (274)
Q Consensus 218 ~~~~~~~~~~l~-~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~~ 263 (274)
...++..+...+ ..+.++.+..... ...+-...++.++ ++|.-+.
T Consensus 95 D~~vN~~I~~~a~~~~~lvn~vd~p~-~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 95 DEKLNNKIRKHCDRLYKLYIDCSDYK-KGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred CHHHHHHHHHHHHHcCCeEEEcCCcc-cCeEEeeeEEecCCEEEEEEC
Confidence 877666655544 4455555543322 2345455555554 4444333
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.03 Score=51.28 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+ ||+|.+++..+...|++|+++.|+.++.+.+. +++.. .+.. +...+.. ....|+++|+++
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~------~~~~~~~-~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTL------ADLENFH-PEEGMILANTTS 448 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeH------hHhhhhc-cccCeEEEeccc
Confidence 4689999998 89999999999999999999999888776654 34322 1111 1111111 123789998875
Q ss_pred hhh---H---HHhhhccccCCEEEEEecC
Q 024011 218 ASY---F---QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~---~---~~~~~~l~~~g~~v~~g~~ 240 (274)
... . +-....+++...++++-..
T Consensus 449 vGm~~~~~~~pl~~~~l~~~~~v~D~vY~ 477 (529)
T PLN02520 449 VGMQPNVDETPISKHALKHYSLVFDAVYT 477 (529)
T ss_pred CCCCCCCCCCcccHhhCCCCCEEEEeccC
Confidence 321 1 1123446666677776543
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.11 Score=43.33 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=66.5
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|....---.|++++|.|.+.-+|.=++.++.+.++.|++..+... +..+
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~-------------------~l~~ 194 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ-------------------DLPA 194 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence 345555555554533322236999999999999999999999999999987653221 2222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|...+- .-++++++..++.+|...
T Consensus 195 ~~~------~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 195 VTR------RADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHh------hCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 222 279999999876542 356788888888888764
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.099 Score=45.47 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=60.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCeEEEEe--cChhhH-HHHHHcCCCEEEeCCCCcHHHHHH--------------
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTA--GSEEKL-AVCKDLGADVCINYKTEDFVARVK-------------- 201 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-------------- 201 (274)
+++.|.|++|+||..++..+++. .++|++.+ ++.+++ +.++++++..+.-.+.. ....+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~-~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEE-AAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH-HHHHHHHhhccCCceEEECh
Confidence 57999999999999999998876 56777775 444444 44567888776544322 112222
Q ss_pred ----HHhCCCCccEEEECCChh-hHHHhhhccccCCEEE
Q 024011 202 ----EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLF 235 (274)
Q Consensus 202 ----~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v 235 (274)
+......+|+|+++.++. .+...+.+++.+-++.
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~Va 119 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIA 119 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEE
Confidence 222223489999988763 4566666665554433
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.033 Score=47.18 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=28.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT 170 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~ 170 (274)
..+++||+|++|-+|..+++.+...|.+|+..
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence 34789999999999999999999999998754
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.1 Score=43.48 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=69.0
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+.+..|+...---.|++++|.|.+.-+|.=++.++.+.++.|++..+... +..+
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~-------------------dl~~ 197 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT-------------------DLKS 197 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC-------------------CHHH
Confidence 456665566655544433446999999999999999999999999999987753322 1111
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
. + +..|+||-++|.+.+- --++++++..++.+|...
T Consensus 198 ~----~--k~ADIvIsAvGkp~~i-~~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 198 H----T--TKADILIVAVGKPNFI-TADMVKEGAVVIDVGINH 233 (282)
T ss_pred H----h--hhcCEEEEccCCcCcC-CHHHcCCCcEEEEecccc
Confidence 1 1 2279999999976542 237889999999998754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 274 | ||||
| 4dup_A | 353 | Crystal Structure Of A Quinone Oxidoreductase From | 9e-65 | ||
| 2j8z_A | 354 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 1e-55 | ||
| 2oby_A | 338 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 1e-55 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 8e-36 | ||
| 1yb5_A | 351 | Crystal Structure Of Human Zeta-crystallin With Bou | 4e-33 | ||
| 1qor_A | 327 | Crystal Structure Of Escherichia Coli Quinone Oxido | 3e-31 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 5e-29 | ||
| 1iyz_A | 302 | Crystal Structures Of The Quinone Oxidoreductase Fr | 8e-27 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 9e-27 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 1e-25 | ||
| 4a27_A | 349 | Crystal Structure Of Human Synaptic Vesicle Membran | 3e-25 | ||
| 2cf2_D | 295 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 7e-25 | ||
| 1wly_A | 333 | Crystal Structure Of 2-haloacrylate Reductase Lengt | 1e-24 | ||
| 3tqh_A | 321 | Structure Of The Quinone Oxidoreductase From Coxiel | 1e-22 | ||
| 1iz0_A | 302 | Crystal Structures Of The Quinone Oxidoreductase Fr | 2e-22 | ||
| 4eye_A | 342 | Crystal Structure Of A Probable Oxidoreductase From | 2e-22 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 2e-20 | ||
| 3gaz_A | 343 | Crystal Structure Of An Alcohol Dehydrogenase Super | 4e-20 | ||
| 2wek_A | 341 | Crystal Structure Of The Human Mgc45594 Gene Produc | 5e-20 | ||
| 2x7h_A | 370 | Crystal Structure Of The Human Mgc45594 Gene Produc | 5e-20 | ||
| 2c0c_A | 362 | Structure Of The Mgc45594 Gene Product Length = 362 | 6e-20 | ||
| 3slk_A | 795 | Structure Of Ketoreductase And Enoylreductase Didom | 4e-19 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 5e-19 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 7e-19 | ||
| 3gms_A | 340 | Crystal Structure Of Putative Nadph:quinone Reducta | 1e-17 | ||
| 1pqw_A | 198 | Putative Enoyl Reductase Domain Of Polyketide Synth | 2e-17 | ||
| 2vn8_A | 375 | Crystal Structure Of Human Reticulon 4 Interacting | 2e-15 | ||
| 3fbg_A | 346 | Crystal Structure Of A Putative Arginate Lyase From | 3e-15 | ||
| 2eer_A | 347 | Structural Study Of Project Id St2577 From Sulfolob | 3e-15 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 7e-15 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 2e-14 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 2e-13 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 2e-13 | ||
| 4a0s_A | 447 | Structure Of The 2-Octenoyl-Coa Carboxylase Reducta | 3e-13 | ||
| 3hzz_A | 467 | 2.4 Angstrom Crystal Structure Of Streptomyces Coll | 8e-13 | ||
| 3krt_A | 456 | Crystal Structure Of Putative Crotonyl Coa Reductas | 7e-12 | ||
| 3gqv_A | 371 | Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant | 1e-11 | ||
| 3b6z_A | 371 | Lovastatin Polyketide Enoyl Reductase (Lovc) Comple | 1e-11 | ||
| 1zsy_A | 357 | The Structure Of Human Mitochondrial 2-Enoyl Thioes | 1e-11 | ||
| 2vcy_A | 344 | Crystal Structure Of 2-Enoyl Thioester Reductase Of | 2e-11 | ||
| 3i4c_A | 347 | Crystal Structure Of Sulfolobus Solfataricus Adh(Ss | 1e-10 | ||
| 1nto_A | 347 | N249y Mutant Of Alcohol Dehydrogenase From The Arch | 1e-10 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 1e-10 | ||
| 1r37_A | 347 | Alcohol Dehydrogenase From Sulfolobus Solfataricus | 2e-10 | ||
| 4b7c_A | 336 | Crystal Structure Of Hypothetical Protein Pa1648 Fr | 2e-10 | ||
| 1h0k_A | 364 | Enoyl Thioester Reductase 2 Length = 364 | 4e-10 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 4e-10 | ||
| 1n9g_A | 386 | Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr | 4e-10 | ||
| 1n9g_B | 386 | Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr | 6e-10 | ||
| 1gu7_A | 364 | Enoyl Thioester Reductase From Candida Tropicalis L | 6e-10 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 9e-10 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 9e-10 | ||
| 4dvj_A | 363 | Crystal Structure Of A Putative Zinc-Dependent Alco | 4e-09 | ||
| 3pi7_A | 349 | Crystal Structure Of A Putative Nadph:quinone Reduc | 5e-09 | ||
| 3nx4_A | 324 | Crystal Structure Of The Yhdh Oxidoreductase From S | 5e-09 | ||
| 1gyr_A | 364 | Mutant Form Of Enoyl Thioester Reductase From Candi | 7e-09 | ||
| 1v3t_A | 333 | Crystal Structure Of Leukotriene B4 12- Hydroxydehy | 3e-08 | ||
| 2y05_A | 328 | Crystal Structure Of Human Leukotriene B4 12-Hydrox | 3e-08 | ||
| 1zsv_A | 349 | Crystal Structure Of Human Nadp-Dependent Leukotrie | 3e-08 | ||
| 1xa0_A | 328 | Crystal Structure Of Mcsg Target Apc35536 From Baci | 3e-08 | ||
| 1o89_A | 345 | Crystal Structure Of E. Coli K-12 Yhdh Length = 345 | 5e-08 | ||
| 2j3h_A | 345 | Crystal Structure Of Arabidopsis Thaliana Double Bo | 1e-07 | ||
| 1jvb_A | 347 | Alcohol Dehydrogenase From The Archaeon Sulfolobus | 3e-07 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 3e-07 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 6e-07 | ||
| 3iup_A | 379 | Crystal Structure Of Putative Nadph:quinone Oxidore | 1e-06 | ||
| 3ip1_A | 404 | Structure Of Putative Alcohol Dehydrogenase (Tm_042 | 1e-06 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 2e-06 | ||
| 1tt7_A | 330 | Crystal Structure Of Bacillus Subtilis Protein Yhfp | 4e-06 | ||
| 4hfj_A | 351 | X-ray Crystal Structure Of A Double Bond Reductase | 6e-06 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 7e-06 | ||
| 4ilk_A | 359 | Crystal Structure Of Short Chain Alcohol Dehydrogen | 1e-05 | ||
| 1e3j_A | 352 | Ketose Reductase (Sorbitol Dehydrogenase) From Silv | 1e-05 | ||
| 2zb3_A | 353 | Crystal Structure Of Mouse 15-Ketoprostaglandin Del | 2e-05 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 3e-05 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 3e-05 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 4e-05 | ||
| 1vj1_A | 363 | Crystal Structure Of Putative Nadph-Dependent Oxido | 1e-04 | ||
| 3goh_A | 315 | Crystal Structure Of Alcohol Dehydrogenase Superfam | 1e-04 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 2e-04 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 2e-04 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 3e-04 | ||
| 4a2c_A | 346 | Crystal Structure Of Galactitol-1-Phosphate Dehydro | 3e-04 | ||
| 2zb4_A | 357 | Crystal Structure Of Human 15-Ketoprostaglandin Del | 3e-04 | ||
| 2w4q_A | 357 | Crystal Structure Of Human Zinc-Binding Alcohol Deh | 4e-04 |
| >pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353 | Back alignment and structure |
|
| >pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354 | Back alignment and structure |
|
| >pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351 | Back alignment and structure |
|
| >pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
| >pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349 | Back alignment and structure |
|
| >pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295 | Back alignment and structure |
|
| >pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333 | Back alignment and structure |
|
| >pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321 | Back alignment and structure |
|
| >pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302 | Back alignment and structure |
|
| >pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343 | Back alignment and structure |
|
| >pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341 | Back alignment and structure |
|
| >pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370 | Back alignment and structure |
|
| >pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362 | Back alignment and structure |
|
| >pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340 | Back alignment and structure |
|
| >pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198 | Back alignment and structure |
|
| >pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375 | Back alignment and structure |
|
| >pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346 | Back alignment and structure |
|
| >pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447 | Back alignment and structure |
|
| >pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467 | Back alignment and structure |
|
| >pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456 | Back alignment and structure |
|
| >pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371 | Back alignment and structure |
|
| >pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371 | Back alignment and structure |
|
| >pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357 | Back alignment and structure |
|
| >pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344 | Back alignment and structure |
|
| >pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347 | Back alignment and structure |
|
| >pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347 | Back alignment and structure |
|
| >pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336 | Back alignment and structure |
|
| >pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
| >pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386 | Back alignment and structure |
|
| >pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386 | Back alignment and structure |
|
| >pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363 | Back alignment and structure |
|
| >pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase (Mll3093) From Mesorhizobium Loti At 1.71 A Resolution Length = 349 | Back alignment and structure |
|
| >pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324 | Back alignment and structure |
|
| >pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364 | Back alignment and structure |
|
| >pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333 | Back alignment and structure |
|
| >pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328 | Back alignment and structure |
|
| >pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349 | Back alignment and structure |
|
| >pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328 | Back alignment and structure |
|
| >pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345 | Back alignment and structure |
|
| >pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345 | Back alignment and structure |
|
| >pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A Resolution Length = 379 | Back alignment and structure |
|
| >pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330 | Back alignment and structure |
|
| >pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359 | Back alignment and structure |
|
| >pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352 | Back alignment and structure |
|
| >pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363 | Back alignment and structure |
|
| >pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346 | Back alignment and structure |
|
| >pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357 | Back alignment and structure |
|
| >pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 450 bits (1160), Expect = e-161
Identities = 131/262 (50%), Positives = 171/262 (65%), Gaps = 2/262 (0%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+ + + G P+V+ + + P + EVL++ EA +NR D QR+GSYPPPK ASP
Sbjct: 29 MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPI 88
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
GLE SG I+ VG VS + VGD+VC L GG YAE +PAGQ+LP P G AAA
Sbjct: 89 LGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAAL 148
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
PE TVW+ +F + L+ GES L+HGG+SGIGT AIQ+ + G V+ TAGS K C
Sbjct: 149 PETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC 208
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
+ LGA INY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL DG L II
Sbjct: 209 ERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFL 267
Query: 241 GGAKTE-LNITSLFAKRLTVQG 261
GGA E +N++ + KRLTV G
Sbjct: 268 GGAVAEKVNLSPIMVKRLTVTG 289
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 449 bits (1157), Expect = e-160
Identities = 112/263 (42%), Positives = 157/263 (59%), Gaps = 2/263 (0%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 23 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82
Query: 61 PGLECSGTILSVGKNV-SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 83 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+ L+H G SG+GT AIQ+ + G VTAGS++KL +
Sbjct: 143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 202
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 203 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 262
Query: 240 QGGAKTELN-ITSLFAKRLTVQG 261
GG + L KR ++
Sbjct: 263 MGGGDINGPLFSKLLFKRGSLIT 285
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 413 bits (1065), Expect = e-146
Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A+ + + G PEVL+L+ ++ P KD +VLIKV A +N +T R G+Y
Sbjct: 30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 89
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
PG + +G I +VG N S +K GD+V + GGYAE V +P + K A
Sbjct: 90 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 149
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
A T + + ++ + GES LVHG S G+G A Q+ + G+++ TAG+EE
Sbjct: 150 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK 209
Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+ GA N++ +++ ++K+ G KG+D+I++ + ++L L+ GR+ ++G
Sbjct: 210 IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
Query: 239 TQGGAKTELNITSLFAKRLTVQG 261
++G E+N AK ++ G
Sbjct: 270 SRGTI--EINPRDTMAKESSIIG 290
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-139
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 19/277 (6%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ G L+L P+ +D E+ I+V+A LN D + R+G+ P
Sbjct: 4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG ECSG + ++G +V +++GD+V A + +AE V P V +P +S +AAAF
Sbjct: 64 PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
P T + +F ++L G S LVH G+G Q+ S K
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI 183
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
KD + + D+V VK + +GVD++LDC+ + L L G + G+
Sbjct: 184 KDSVTH--LFDRNADYVQEVKRIS-AEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSS 240
Query: 241 GGAKTE----------------LNITSLFAKRLTVQG 261
E +N L+ + + G
Sbjct: 241 NMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAG 277
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 390 bits (1003), Expect = e-137
Identities = 95/289 (32%), Positives = 137/289 (47%), Gaps = 27/289 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ G PEVL++ ++ P+ EV ++++A ALN D RKG P
Sbjct: 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGG 93
G + SG + +VG V + GD+V G G
Sbjct: 61 LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
YAE V +P + P P +S ++AAA P T W V + PG+ LV SG+
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180
Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
AIQ+ K G RV TAGSE+KL K LGAD +NY D+ V+ TGGKG D ++
Sbjct: 181 VAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240
Query: 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
D GA YF+ + + GR+ I G G + L +F ++L++ G
Sbjct: 241 DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGS 289
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 375 bits (965), Expect = e-131
Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 18/278 (6%)
Query: 1 MKAIVITQPGSPE------------VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK 48
MKA+++ G + L+ + P +VLIKV ++N +D K
Sbjct: 11 MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIK 70
Query: 49 GSYPPPKGASPYPGLECSGTILSVGKNV-SRWKVGDQVC---ALLGGGGYAEKVAVPAGQ 104
G Y P+ G E GTI++ G ++ VG +V L G +AE A
Sbjct: 71 GQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA 130
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG 164
+P+ V +D AA T + +F ++F++ G+S + I + K +G
Sbjct: 131 CIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEG 189
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 224
R VT +E++A+ KD+GA +N K DF A ++E + + LD +
Sbjct: 190 FRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASAI 249
Query: 225 LGSLNIDGRLFIIGTQGGAKTEL-NITSLFAKRLTVQG 261
++ R I G T + L + ++G
Sbjct: 250 FNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEG 287
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-131
Identities = 83/261 (31%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAI PE L +VE P + V++ V+A + D L KG Y
Sbjct: 22 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFV 81
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E +G + S + S K GD+V A GGYAE+VAV +LP P + +A A
Sbjct: 82 PGIETAGVVRSAPE-GSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVAL 140
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
T++ L GE+ LV G + GIGT AIQ+ K G +V
Sbjct: 141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV 200
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K +GAD+ + E + V+E TGG GVD+++D +G F + +L +GRL ++G
Sbjct: 201 KSVGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA 259
Query: 241 GGAKTELNITSLFAKRLTVQG 261
G + + L + ++ G
Sbjct: 260 AGGIPTIKVNRLLLRNASLIG 280
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 371 bits (955), Expect = e-130
Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 2/262 (0%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
K I + G+P +VLQ++ +KD+EV +++ +N +D + G+Y
Sbjct: 5 GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPN 64
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
PG E G + +VG VSR +G +V L G G + E V A V+P+P + AA
Sbjct: 65 IPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQ 124
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
T W T T +L + LV+ S IG Q+ + R+ + +
Sbjct: 125 MYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE 184
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
LGA I+ T V E T G G D +D +G SL +G IG
Sbjct: 185 LLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGL 244
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
G + + ++
Sbjct: 245 LSGIQVNWAEI-VTKAKVHANI 265
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 361 bits (928), Expect = e-126
Identities = 87/261 (33%), Positives = 129/261 (49%), Gaps = 20/261 (7%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E G + G + AL+ GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59 PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
P T + + PGE LV + +GT A+Q+ + G+RV A EKLA+
Sbjct: 108 PVSFLTAYL-ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
LGA+ Y + G+D++L+ G + +LG L GRL IG
Sbjct: 167 LALGAEEAATYAEV-----PERAKAWGGLDLVLEVRGK-EVEESLGLLAHGGRLVYIGAA 220
Query: 241 GGAKTELNITSLFAKRLTVQG 261
G + L + L V G
Sbjct: 221 EGEVAPIPPLRLMRRNLAVLG 241
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-120
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 26/286 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+ + +P L+L E P+ + +++++ A +LN D L +
Sbjct: 28 MQEWST-ETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFV 86
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAE 96
P + SG + +VGK+V+R++ GD+V + LGG G +E
Sbjct: 87 PASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSE 146
Query: 97 KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156
V +P G + P + +A+ P T W + HL G+ +V G + G+ F
Sbjct: 147 YVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFG 205
Query: 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216
+Q+ K G V VT+ S EKL LGAD IN ED+V RV TG +G D IL+
Sbjct: 206 LQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA 265
Query: 217 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + ++L ++ DGR+ +IG G + + L K VQGI
Sbjct: 266 GGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI 311
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-119
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A V+ + P VL+ ++ PQ +VL+++EA+ N D R G P + P
Sbjct: 8 MIAAVVEEANGPFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPA 65
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
G++ +GT+++VG V ++VGD V L GG G +A+ AV A + P+ +++
Sbjct: 66 ILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTM 125
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
+ A+ P V T W + + + G++ L+ GG G+G AIQ+ +G RVF TA
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RG 184
Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
L +DLGA + + E T G+G D++ D +G + ++ G +
Sbjct: 185 SDLEYVRDLGATPIDASREPED--YAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHV 242
Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQGIVPLIS 267
G + L K+ T G+ L +
Sbjct: 243 VSCLGWGTH----KLAPLSFKQATYSGVFTLHT 271
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-108
Identities = 77/273 (28%), Positives = 119/273 (43%), Gaps = 15/273 (5%)
Query: 1 MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ V ++ P D ++L++ +N +D G Y P
Sbjct: 24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83
Query: 58 SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
G E G ++++G + S Q A + G +AE VPA PVPS +
Sbjct: 84 PFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKP--EY 141
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
T + ++ LS G+ LV + G G FA+Q+ K V T S+EK
Sbjct: 142 LTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS 201
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
A K LG D INYKTE +K + +GVDV+ + +G + F + +L GRL +I
Sbjct: 202 AFLKSLGCDRPINYKTEPVGTVLK-QEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVI 260
Query: 238 GTQGGAKTELNIT---------SLFAKRLTVQG 261
G G +T ++ L K +VQG
Sbjct: 261 GFISGYQTPTGLSPVKAGTLPAKLLKKSASVQG 293
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = e-101
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-P 59
+ A VI + G P+ +EV+ +V ++ A +N DT R G P P
Sbjct: 2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA 117
G E + + VG V+ + VG++VC L G Y+++ PA +++ VP + L D
Sbjct: 62 IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDV 121
Query: 118 --AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
A T + T + PG+ L+H + G+G + + G V T +EE
Sbjct: 122 HLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE 181
Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
K + LG INY T+DF V+E TGGKGVDV+ D +G Q++L L G
Sbjct: 182 KAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCA 241
Query: 236 IIGTQGGAKTELNITSLFAKR 256
G G + + R
Sbjct: 242 AYGHASGVADPIRVVEDLGVR 262
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 291 bits (748), Expect = 1e-98
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 6/267 (2%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
++A+V G P +V++L+ +E ++ +V +K+ A +N +D +G+Y
Sbjct: 27 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAA 118
G E +++VG NV+ K GD V G G + + ++ VPS + L+ AA
Sbjct: 87 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
CT + + L PG+S + + +SG+G IQ+ G+R +
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 206
Query: 179 ----VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
K LGA+ I + + L+C+G L L G +
Sbjct: 207 KLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTM 266
Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQG 261
G +++ L K L ++G
Sbjct: 267 VTYGGMAKQPVVASVSLLIFKDLKLRG 293
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 270 bits (693), Expect = 2e-90
Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 7/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
K I+I + G +V++ ++ P I ++E+LIK + T +N ++ RKG YP K PY
Sbjct: 9 QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PY 65
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVS---LKD 116
G E SGT+++ GK V+ ++VGDQV + G V+ +P G S LK
Sbjct: 66 VLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
AA T S H+ G+ L+ + G+G Q+ K +G A ++EK
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK 185
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
L + K+ GA+ IN ED + +V + T GKGVD D +G F+ +L +L G
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245
Query: 237 IGTQGGAKTELNITSLFAKRLTVQG 261
G G +IT L K +T+
Sbjct: 246 FGNASGLIPPFSITRLSPKNITLVR 270
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 268 bits (687), Expect = 1e-89
Identities = 85/258 (32%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
K I + G PEVL+ + E V+++ +A LN DT R G YP P P
Sbjct: 2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAP--FLPS 59
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
G E +G + +VG V+R+KVGD+V G Y+E +P ++ + VS + AA
Sbjct: 60 GLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAA 119
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
A TV + T + PGE L H + G+G+ A Q K G ++ T S EK A
Sbjct: 120 ALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA 179
Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
K LGA I+Y ED RV E T GK V+ D +G + +L S+ G + G
Sbjct: 180 HAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFG 239
Query: 239 TQGGAKTELNITSLFAKR 256
G + +N+ L K
Sbjct: 240 NASGPVSGVNLGILAQKD 257
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 265 bits (681), Expect = 6e-89
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAI Q G P+VL+L + P+ + +++LIKV A +LN D R GS K
Sbjct: 7 MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 61 ----PGLECSGTILSVGKNVSRWKVGDQVCALLG----GGGYAEKVAVPAGQVLPVPSGV 112
G + SG ++ +G +V+ +GD+V + G YAE V ++ +
Sbjct: 67 LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
S AA+ P T + + G+ L+H G+ G+G AIQ+ K +G V TA
Sbjct: 127 SFLQAASLPTAGLTAL-QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA- 184
Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
S+ A K LGA+ CINY EDF+ + VD ++D +G +++ L G
Sbjct: 185 SKRNHAFLKALGAEQCINYHEEDFLLAIST-----PVDAVIDLVGGDVGIQSIDCLKETG 239
Query: 233 RLFIIGTQGGAK 244
+ + T +
Sbjct: 240 CIVSVPTITAGR 251
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 266 bits (681), Expect = 8e-89
Identities = 86/258 (33%), Positives = 123/258 (47%), Gaps = 4/258 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
I + G PEVLQ E ++E+ ++ +A +N DT R G YPPP P
Sbjct: 2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPS--LPS 59
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
G E +G + VG V K GD+V A G Y+ + A + +P+ +S + AA
Sbjct: 60 GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
A TV+ + T + P E FL H + G+G A Q K G ++ T G+ +K
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
GA INY+ ED V R+KE TGGK V V+ D +G ++R+L L G + G
Sbjct: 180 SALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 239
Query: 239 TQGGAKTELNITSLFAKR 256
GA T +N+ L K
Sbjct: 240 NSSGAVTGVNLGILNQKG 257
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 261 bits (668), Expect = 2e-86
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 34/295 (11%)
Query: 1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPK 55
+A++ TQ G P+ Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63
Query: 56 GASPY-------PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLP 107
G E ++ VG NVS + GD V + + G + +
Sbjct: 64 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 108 V-----------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV-HGGSSGIGTF 155
+ P+G+++ A T + + L+PG+ + + +GG+S +G +
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 156 AIQMGKCQGVRVFVTAGS----EEKLAVCKDLGADVCINYKTE---DFVARVKEET--GG 206
A Q+GK +E +A K+LGA I +F +KE G
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+ L+C+G LN +G + G + + K T G
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAG 298
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 2e-83
Identities = 67/326 (20%), Positives = 120/326 (36%), Gaps = 64/326 (19%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M A + T+ P + + L +V P++ E L+ V A+++N G
Sbjct: 43 MFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE 102
Query: 60 Y-----------------PGLECSGTILSVGKNVSRWKVGDQVCAL-------------- 88
G + +G +L G V+ W+ GD+V A
Sbjct: 103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162
Query: 89 -------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
GG AE V + Q++P P +S ++AAA V T + + +
Sbjct: 163 TMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRN 222
Query: 136 --HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT 193
+ G++ L+ G S G+G++A Q G S +K +C+ +GA+ I+
Sbjct: 223 GAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNA 282
Query: 194 E-----------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
E F R++E TGG+ +D++ + G F ++ G +
Sbjct: 283 EGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITT 342
Query: 237 IGTQGGAKTELNITSLFAKRLTVQGI 262
+ G E + L+ + G
Sbjct: 343 CASTSGYMHEYDNRYLWMSLKRIIGS 368
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 250 bits (639), Expect = 6e-82
Identities = 55/306 (17%), Positives = 103/306 (33%), Gaps = 49/306 (16%)
Query: 1 MKAIVIT---QPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----- 52
A+ + + L L ++ P DEVLI++EA+ LN +D G+
Sbjct: 3 HSALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAK 62
Query: 53 -----------------------PPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL 89
AS G E +G ++ G + + + + A +
Sbjct: 63 ASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI 122
Query: 90 GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
GG Y++ +PA Q L +P G + D A+ T + T L + + +
Sbjct: 123 GGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALG-MVETMRLEGHSALVHTAAA 181
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
S +G Q+ G+++ +E+ + K GA N + F+ + E G
Sbjct: 182 SNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGA 241
Query: 210 DVILDCMGASYFQRNLGSL-----------------NIDGRLFIIGTQGGAKTELNITSL 252
+ D G + + ++++ G + TE N
Sbjct: 242 TIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFG 301
Query: 253 FAKRLT 258
A +
Sbjct: 302 MAWGMG 307
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 2e-75
Identities = 73/336 (21%), Positives = 117/336 (34%), Gaps = 74/336 (22%)
Query: 1 MKAIVITQ-----------PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG 49
A+ + + L+L EV P++ DEVL+ V A+++N
Sbjct: 25 YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMF 84
Query: 50 SYPPPKGASPY-----------------PGLECSGTILSVGKNVSRWKVGDQVCA----- 87
P G +CSG ++ G V RWK GD V
Sbjct: 85 EPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHV 144
Query: 88 ------------------LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
G GG AE V A Q+LP P+ ++ ++AA P A
Sbjct: 145 DEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAG 204
Query: 126 TVWSTVFMTS--HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183
T + + + G+ L+ G S G+G++AIQ K G S +K A + L
Sbjct: 205 TAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL 264
Query: 184 GADVCINYKTEDF-----------------VARVKEETGGKGVDVILDCMGASYFQRNLG 226
G D+ IN +A++ E G+ D++ + G F ++
Sbjct: 265 GCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVI 324
Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + G+ G + L+ K + G
Sbjct: 325 VARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGS 360
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 2e-72
Identities = 74/270 (27%), Positives = 110/270 (40%), Gaps = 27/270 (10%)
Query: 1 MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
A VI + G EVL+ Q + P I +EV++KV A ++N D R G
Sbjct: 22 SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81
Query: 59 PY--------------PGLECSGTILSVGKNVSRWKVGDQVCALLG---GGGYAEKVAVP 101
G + SG ++ G +V +K GD+V A + G +E V V
Sbjct: 82 RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVS 141
Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----SPGESFLVHGGSSGIGTFAI 157
+V P ++ AA+ P VA T WS + L G+ L+ G S G+GTFAI
Sbjct: 142 GNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAI 201
Query: 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
Q+ K V S++ + + LGAD I+YK+ ++K K D ILD +G
Sbjct: 202 QVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS---LKPFDFILDNVG 257
Query: 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTEL 247
S L + +
Sbjct: 258 GSTETWAPDFLKKWSGATYVTLVTPFLLNM 287
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 4e-67
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 23/273 (8%)
Query: 1 MKAIVITQPGS---PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
+KAI QP + + ++ P+ K E+L+K+++ ++N DT QR
Sbjct: 3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA--- 59
Query: 58 SPY-PGLECSGTILSVGKNVSRWKVGDQVCA---LLGGGGYAEKVAVPAGQVLPVPSGVS 113
P G + G + SVG V+ + GD V G AE + V P +S
Sbjct: 60 -PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNIS 118
Query: 114 LKDAAAFPEVACTVWSTVF------MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
+ A + P T + T+F + + G++ L+ G+ G+G+ A Q+ K G+RV
Sbjct: 119 AEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRV 178
Query: 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLG 226
TA E + K +GAD+ +N+K + G + VD + Y+ +
Sbjct: 179 ITTASRNETIEWTKKMGADIVLNHKESLLNQ--FKTQGIELVDYVFCTFNTDMYYDDMIQ 236
Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 259
+ G I T + + ++ +L K L+
Sbjct: 237 LVKPRGH---IATIVAFENDQDLNALKPKSLSF 266
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 4e-63
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 40/297 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 -------PGLECSGTILSVGKNVSRWKVGDQV-------------C----------ALLG 90
G E +G I VG V + GD V C
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 91 G----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
G G YAE V VP + + ++ +AA T + V + L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+GT A+Q+ K G + EE + K GAD IN +D +A ++ T
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
KGVD ++D + +L G+ ++G G + + + G
Sbjct: 238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-DLHYHAPLITLSEIQFVG 293
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 198 bits (504), Expect = 1e-61
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 28/237 (11%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
A+ + V P + D+V ++VEA A+N +DT R P +
Sbjct: 12 QTALTVNDHDEVTVWN--AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPW----AF 65
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVPSGV 112
G + +GT+++VG +V+ +VGD+V G +++ +P G+
Sbjct: 66 LGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGL 125
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSP------------GESFLVHGGSSGIGTFAIQMG 160
S + AAA P T + + P LV+GGS+ T +QM
Sbjct: 126 SFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQML 185
Query: 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
+ G T S + K GA+ +Y+ + ++ T + LDC+
Sbjct: 186 RLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNN-LRYALDCIT 240
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 1e-61
Identities = 51/268 (19%), Positives = 96/268 (35%), Gaps = 24/268 (8%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+ + + + L V+ P + D++L++ +A +N D K + +
Sbjct: 2 MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWS--NG 59
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCA---LLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
+ PG++ +G I+ VG V +G +V L G +AE + +V+ +P +S +
Sbjct: 60 HVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFE 119
Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
AAA P T W F L+ L+ G + QM G V +
Sbjct: 120 RAAALPCPLLTAW-QAFEKIPLTKQREVLIV-GFGAVNNLLTQMLNNAGYVVD-LVSASL 176
Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
A+ G ++ + I D + + + SL +G +
Sbjct: 177 SQALAAKRGVRHLYREPSQV----------TQKYFAIFDAVNSQNAAALVPSLKANGHII 226
Query: 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263
I + I F + ++ I
Sbjct: 227 CIQDRI----PAPIDPAFTRTISYHEIA 250
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 1e-60
Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 20/272 (7%)
Query: 1 MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
MKA+ +P L E+ P ++L++V+A ++N D R+ + P
Sbjct: 23 MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGT-- 80
Query: 58 SPY-PGLECSGTILSVGKNVSRWKVGDQV---CALLGGGGYAEKVAVPAGQVLPVPSGVS 113
G + +G + +VG +V+ ++ GD+V +++ G AE V V P +
Sbjct: 81 DWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLD 140
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSSGIGTFAIQMGK-CQGVRV 167
+AAA P + T W F ++ + L+ GG+ G+G+ A+Q+ + + V
Sbjct: 141 WAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTV 200
Query: 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 227
TA E K LGA I++ A V G V +
Sbjct: 201 IATASRPETQEWVKSLGAHHVIDHSKPLA-AEVAALGLGAPAFVFSTTHTDKHAAEIADL 259
Query: 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 259
+ GR +I +I K +++
Sbjct: 260 IAPQGRFCLIDDPS----AFDIMLFKRKAVSI 287
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 8e-53
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 4 IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+ T+PGS + L L + + D EV I + A +N D L G YP
Sbjct: 213 LEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGV----ASL 268
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
G E +G ++ G V+ GD+V + + V +P+G S AA+ P
Sbjct: 269 GSEGAGVVVETGPGVTGLAPGDRVMGM-IPKAFGPLAVADHRMVTRIPAGWSFARAASVP 327
Query: 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181
V T + + + L PGES LVH + G+G AIQ+ + G V+ TA ++ AV
Sbjct: 328 IVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV-- 385
Query: 182 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+L + + +T DF + TGG+GVDV+L+ + + +L L GR +G
Sbjct: 386 ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG 442
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 7e-49
Identities = 61/298 (20%), Positives = 116/298 (38%), Gaps = 47/298 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA ++ + P L +++V P+ + +EVLI++ + R D KG P
Sbjct: 4 SKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQV----------C-------------ALLGG----G 92
G E +GTI+ VG +++ K GD V C ++ G G
Sbjct: 62 ILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG 120
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTV---FMTSHLSPGESFLVH 146
G++E + V + + L + +S +AA +A T + +V+
Sbjct: 121 GFSEYMLVKSSRWLVKLNSLSPVEAAP---LADAGTTSMGAIRQALPFISKFAEPVVIVN 177
Query: 147 GGSSGIGTFAIQMGK--CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204
G G+ + IQ+ K + + + + S++ +LGAD +D + + + T
Sbjct: 178 GI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE--MKDAESLINKLT 234
Query: 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
G G + +D +G L +G + ++G +G + L + G
Sbjct: 235 DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK-RVSLEAFDTAVWNKKLLG 291
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 1e-46
Identities = 64/300 (21%), Positives = 109/300 (36%), Gaps = 47/300 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+ T+ GS + ++ P E+L+KV A L +D P
Sbjct: 1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQV-------------C-------------------A 87
G E GT+ +G+ V+ + VGD V C
Sbjct: 59 TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118
Query: 88 LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC----TVWSTVFMTSHLSPGESF 143
L G AE + V + + L + AA + + + L PG +
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAP---LTDAGLTPYHAISRVLPLLGPGSTA 175
Query: 144 LVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 202
+V G G+G IQ+ + RV +++LA+ +++GAD + ++E
Sbjct: 176 VVI-GVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK-SGAGAADAIRE 233
Query: 203 ETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
TGG+G + D +GA + +DG + ++G GA + +V
Sbjct: 234 LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAH-AKVGFFMIPFGASVVT 292
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 5e-46
Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 44/296 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+ + G+ + ++ V P+ D++L+KVEA + D G +P P
Sbjct: 24 MKAVRLESVGN---ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PV 77
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLGGG 92
G E G ++ G V G ++ + G
Sbjct: 78 TLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDG 137
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG- 151
G+AE V VP Q +P + A +AC + S + G + + GG G
Sbjct: 138 GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGV--DLSGIKAGSTVAILGG--GV 193
Query: 152 IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKG 208
IG +Q+ + G V ++ K + +++GA ++ D V + G G
Sbjct: 194 IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253
Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQGI 262
VDV+++C G +++ G + I+G G K E+ + + L V G
Sbjct: 254 VDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGS 309
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 5e-46
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 42/297 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGAS- 58
+KA + + P L++++V+ P+++ +V++++ + D +G +
Sbjct: 16 LKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 73
Query: 59 PY-PGLECSGTILSVGKNVSRWKVGDQV-------------C----------ALLGG--- 91
PY G E G I V + V + GD V C G
Sbjct: 74 PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 133
Query: 92 -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMT-SHLSPGESFLVH 146
GG+AE + V+ +P +S + +A T + V L PG +
Sbjct: 134 DGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV 193
Query: 147 GGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+G A+Q+ K V EEKL + + LGAD ++ + D V +V E T
Sbjct: 194 GVG-GLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTR 251
Query: 206 GKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
G+GV+V +D +G+ L GRL I+G G + + + ++ +G
Sbjct: 252 GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY--GGELRFPTIRVISSEVSFEG 306
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 2e-44
Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 41/295 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
M AI+ T+PG +L EV+ P+ EVLIKV AT++ D + + + P
Sbjct: 5 MVAIMKTKPG--YGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG------ 91
G E +G ++ +G V +VGD V C
Sbjct: 63 QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD 122
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
G +AE VPA + P + + A + V + + + G+S L+ G +G
Sbjct: 123 GVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDT---VLAGPISGKSVLITG--AG 177
Query: 152 -IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
+G I + K G V V+ S+ + + K +GAD IN ED V V + T G GV
Sbjct: 178 PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGV 237
Query: 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQGI 262
DV L+ GA ++ L ++ GR+ ++G K ++ +L K LT+ GI
Sbjct: 238 DVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-YPGKVTIDFNNLIIFKALTIYGI 291
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-44
Identities = 68/306 (22%), Positives = 109/306 (35%), Gaps = 46/306 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRAD--TLQRKGSYPPPKGA 57
MK++V G +++ E P+IK DEV +K+ ++ L +D + + G++ P
Sbjct: 1 MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPIT- 56
Query: 58 SPYPGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLG 90
G E SG I +VG V GD V
Sbjct: 57 ---LGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR 113
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
GG+AE + V V +P+ + ++D A + + + + ++ ++ G
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAF--HLAQGCENKNVIIIGA-- 169
Query: 151 G-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
G IG AIQ G V S EKLA+ K GA N +
Sbjct: 170 GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF 229
Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT--ELNITSLFAKRLTVQGIVPL 265
+IL+ G + + +L ++GT + K LTV G
Sbjct: 230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMN 289
Query: 266 ISGPWC 271
S PW
Sbjct: 290 YSSPWP 295
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 6e-44
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G+P L + EV PQ +V +K+EA+ + D G +P
Sbjct: 3 MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV-----------C-------------ALLGG----G 92
PG E G + +VG VSR K GD+V C G G
Sbjct: 61 PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
GY E V V +P V + A P + C TV+ + + PG+ ++ G
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIA--P-ILCAGVTVYKGL-KVTDTRPGQWVVISGIG 176
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
G+G A+Q + G+RV + KL + + LGA+V +N + D A +++E G G
Sbjct: 177 -GLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIG--GA 233
Query: 210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+L + F + +G + G + + G G I + K +T++G
Sbjct: 234 HGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGITIRG 285
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 1e-43
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 40/294 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
K ++ + L+ +++ P+ K +E+LI V+ + + D G +P P
Sbjct: 6 QKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLV 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV-----------C-------------ALLGG----G 92
G E +G ++ +G+NV WK+GD C A L G G
Sbjct: 64 GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDG 123
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
+ + A Q +P G L A P + C TV+ + +++L G + G +
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVA--P-ILCAGITVYKAL-KSANLMAGHWVAISGAA 179
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKG 208
G+G+ A+Q K G RV G E K + + +G +V I++ K +D V V + T G G
Sbjct: 180 GGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDG-G 238
Query: 209 VDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+++ + + + + +G ++G GAK ++ + K +++ G
Sbjct: 239 AHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG 292
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 4e-43
Identities = 80/293 (27%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ Q P L+++EVE P I EVL++++A + D G +P
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGD----------------------QVC--ALLGG----G 92
PG E G + VG V+ KVGD +C G G
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
GYAE A V+ +P +S ++AA P + C T + + + PGE ++G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAA--P-IFCAGVTTYKAL-KVTGAKPGEWVAIYGIG 174
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
G+G A+Q K G+ V +EKL + K+LGAD+ +N ED +KE+ G GV
Sbjct: 175 -GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVG--GV 231
Query: 210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+ + FQ S+ G ++G + + I + + G
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIG 283
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 7e-40
Identities = 63/316 (19%), Positives = 112/316 (35%), Gaps = 59/316 (18%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
+ + ++++EV +P+I K E++IKV+A + +D +
Sbjct: 31 WLGSKVWRYPE---VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPG 87
Query: 60 Y------PGLECSGTILSVGKNV------SRWKVGDQVC--------------------- 86
G E SG ++ G R+++G+ VC
Sbjct: 88 LTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHC 147
Query: 87 ------ALLGGGGYAEKVAVPAGQVLPVPSGVSLK------DAAAFPE-VACTVWSTVFM 133
G +AE V V A + + A + E + + +
Sbjct: 148 ENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVR 207
Query: 134 TSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINY 191
+ PG++ ++ GG G IG A+ + K G V ++ SE + + K+LGAD I+
Sbjct: 208 GGGIRPGDNVVILGG--GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP 265
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGR----LFIIGTQGGAKTE 246
E+FV V + T G G + L+ G + + R I + AK
Sbjct: 266 TKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIP 325
Query: 247 LNITSLFAKRLTVQGI 262
L +R + G
Sbjct: 326 LTGEVFQVRRAQIVGS 341
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-38
Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 11/240 (4%)
Query: 6 ITQPGSPEVLQLQEV---EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
+ G ++ + L V T+LN D + G P +
Sbjct: 1535 VLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLT 1594
Query: 63 LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
+C + G++ G +V ++ G A V + VPS +L++AA+ P
Sbjct: 1595 RDCMLGMEFSGRDA----SGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPI 1650
Query: 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
V T + ++ + + PGES L+H GS G+G AI + +G RVF T GS EK A +
Sbjct: 1651 VYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQA 1710
Query: 183 ----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
L N + F V T GKGVD++L+ + Q ++ L GR IG
Sbjct: 1711 RFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG 1770
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-37
Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
M+A+ P E L L + P+ E+L++VEA ++ D + + ++ + P
Sbjct: 1 MRALAKLAPE--EGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLGG 91
G E SG + +VG V R +VGD V +
Sbjct: 59 LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
GG+AE V VPA P + + AA V + G+S L+ G +G
Sbjct: 119 GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTV--YAGSGVSGKSVLITG--AG 174
Query: 152 -IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
IG A + + G + V+ + +LA + + +N ED + V+ TG GV
Sbjct: 175 PIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRL-VNPLEEDLLEVVRRVTGS-GV 232
Query: 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS-LFAKRLTVQGI 262
+V+L+ G + + L +L G I+G ++ L + +T GI
Sbjct: 233 EVLLEFSGNEAAIHQGLMALIPGGEARILGI-PSDPIRFDLAGELVMRGITAFGI 286
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 8e-36
Identities = 62/297 (20%), Positives = 116/297 (39%), Gaps = 43/297 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
++V+ PG L+L+ P+ +EVL+++ + + +D G P
Sbjct: 8 NLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCA------------LLG---------------- 90
G E SGT+ VG +V K GD+V +G
Sbjct: 65 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G A +P V+ ++ A ++ + + ++ G LV G +
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC--RRGGVTLGHKVLVCG--A 180
Query: 151 G-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--G 206
G IG + + K G +V VT S +L+ K++GAD+ + E ++ G G
Sbjct: 181 GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG 240
Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
+V ++C GA + Q + + G L ++G G T + + + + ++G+
Sbjct: 241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGL-GSEMTTVPLLHAAIREVDIKGV 296
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 5e-35
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 44/298 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
+ V+ + L+L++ P+ K+DEVL+++ + +D G P
Sbjct: 5 NLSAVLYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 61
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLG------- 90
G E SGT++ VGKNV K GD+V C L
Sbjct: 62 MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 121
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G A A +P VSL++ A ++ V + + + G + LV G
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHAC--RRAGVQLGTTVLVIGA-- 177
Query: 151 G-IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETG-- 205
G IG ++ K G V TA S +L V K+ GADV ++ E+ + ++
Sbjct: 178 GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAI 237
Query: 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G +V +DC G + G L ++G G + + + A+ + ++ +
Sbjct: 238 GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGM-GSQMVTVPLVNACAREIDIKSV 294
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 7e-34
Identities = 62/316 (19%), Positives = 107/316 (33%), Gaps = 63/316 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
A+V+ + P L +E E I +L+++ + + +D +G P P
Sbjct: 18 AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV----PL 71
Query: 61 P---GLECSGTILSVGKNVS-----RWKVGDQVCALLG---------------------- 90
P G E +G ++ V K GD + G
Sbjct: 72 PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 131
Query: 91 --------------GGGYAEKVAV-PAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
G Y+ + + P VL V L A T +
Sbjct: 132 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYP 191
Query: 136 HLSPGESFLVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCIN--- 190
G++ ++ G G +G F + + + G V V AGS +L + +++GAD+ +N
Sbjct: 192 ESFAGKTVVIQGAG--PLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE 249
Query: 191 YKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
E+ + + T G+G D IL+ G + L G + G + +
Sbjct: 250 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG-VAVPQDPVPF 308
Query: 250 ---TSLFAKRLTVQGI 262
L K T +GI
Sbjct: 309 KVYEWLVLKNATFKGI 324
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 5e-33
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161
+ V+P+P ++ +AA F T W ++ LSPGE L+H + G+G A+ + K
Sbjct: 1 SDLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK 60
Query: 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221
G R++ TAGS+ K + LG + + ++ DF + E T G GVDV+L+ +
Sbjct: 61 MIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAI 120
Query: 222 QRNLGSLNIDGRLFIIG 238
QR + L GR +G
Sbjct: 121 QRGVQILAPGGRFIELG 137
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 7e-30
Identities = 46/314 (14%), Positives = 98/314 (31%), Gaps = 63/314 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
MKAI + + + + E P+ + E L++ + D + G P+G
Sbjct: 1 MKAIAVKRG--EDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQVCA------------------------------- 87
G E G + V N + + GD V
Sbjct: 59 LVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116
Query: 88 -LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE-VACTVW----STVFMTSHLSPGE 141
+ G +E P ++ +P + + E ++ T + ++
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISITEKALEHAYASRSAFDWDPS 174
Query: 142 SFLVHGGSSG-IGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKDLGADVCINYKTE 194
S V G +G +G + M K + + + + ++L A + +
Sbjct: 175 SAFVLG--NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDS--RQ 230
Query: 195 DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI---- 249
V V + +D I + G + +++ +L +G ++G E++
Sbjct: 231 TPVEDVPDVYE--QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFH 288
Query: 250 TSLFAKRLTVQGIV 263
+ + G V
Sbjct: 289 REMVLHNKALVGSV 302
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 7e-30
Identities = 56/286 (19%), Positives = 110/286 (38%), Gaps = 44/286 (15%)
Query: 15 LQLQEVEDPQ-IKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPY-PGLECSGTILS 71
L+ V+ + +K+ EV + V +T + +D + G P + G E +G +++
Sbjct: 27 PSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIA 86
Query: 72 VGKNVSRWKVGDQVCA------------LLG----------------GGGYAEKVAVPAG 103
V +V KVGD+V L G G V PA
Sbjct: 87 VHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAV 146
Query: 104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKC 162
+ + +S ++ A ++ + + + G+ L+ G +G IG + K
Sbjct: 147 WCHKIGN-MSYENGAMLEPLSVALAGL--QRAGVRLGDPVLICG--AGPIGLITMLCAKA 201
Query: 163 QGV-RVFVTAGSEEKLAVCKDLGADVCINYK----TEDFVARVKEETGGKGVDVILDCMG 217
G + +T E +L K++ +V + E+ ++ E GG V L+C G
Sbjct: 202 AGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTG 261
Query: 218 A-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
S + ++ G++F+IG G + ++ + + +Q
Sbjct: 262 VESSIAAAIWAVKFGGKVFVIGV-GKNEIQIPFMRASVREVDLQFQ 306
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 2e-28
Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 45/299 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MK + G E E P + +++ A A +D +
Sbjct: 1 MKGFAMLSIGKVGW---IEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMIL 57
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG-------- 91
G E G ++ VG V +K GD+V +
Sbjct: 58 -GHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVK 116
Query: 92 -GGYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148
G + E V + +P + L+ A P++ T + + +++ G++ V G
Sbjct: 117 DGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAEL-ANIKLGDTVCVIG- 174
Query: 149 SSG-IGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
G +G ++ G R+F + + + GA INYK D V ++ + T G
Sbjct: 175 -IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG 233
Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNITSLFAKRLTVQG 261
KGVD ++ G F + + + + + G + + + G
Sbjct: 234 KGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHG 292
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-28
Identities = 47/323 (14%), Positives = 90/323 (27%), Gaps = 77/323 (23%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEAT--------ALNRADTLQRKGSY 51
MKAI++ P +Q+++V++ ++ ++ I+ +N +
Sbjct: 1 MKAIIVKPPN--AGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNG-----KLTLS 53
Query: 52 PPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCA----------------------- 87
PKG G E G + GD V
Sbjct: 54 TLPKGKDFLVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETG 110
Query: 88 ---LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE-VACTVW----------- 128
G G E ++ +P + D + +A
Sbjct: 111 EFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE--DIGILAQPLADIEKSIEEILEVQKR 168
Query: 129 -STVFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGA 185
LV G +G IG + + G+ ++
Sbjct: 169 VPVWTCDDGTLNCRKVLVVG--TGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET 226
Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYFQRNLGSLNIDGRLFIIGTQGGA 243
Y + + ++K+ G DVI+D G + + L +G L + G
Sbjct: 227 KT-NYYNSSNGYDKLKDSVG--KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG 283
Query: 244 KTELN---ITSLFAKRLTVQGIV 263
L+ + + T+ G+V
Sbjct: 284 SVPLDYKTLQEIVHTNKTIIGLV 306
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 1e-23
Identities = 75/321 (23%), Positives = 118/321 (36%), Gaps = 70/321 (21%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+ A V G+ +LQ ++ Q + DEVL+KV AT + D + R YP P
Sbjct: 7 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-----L 59
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCAL----------------------------- 88
P G E SG I ++G NV+ +VGD V
Sbjct: 60 PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119
Query: 89 --------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV- 127
+A + V V ++ C +
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPL---GCGIQ 176
Query: 128 --WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
++P SF+ G +G A+ K G + E +L + K LG
Sbjct: 177 TGAGACINALKVTPASSFVTWGAG-AVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG 235
Query: 185 ADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN-LGSLNIDGRLFIIG-TQGG 242
A IN KT+D VA +KE T G GV+ L+ G+ + + +L I G++ ++G Q G
Sbjct: 236 ATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG 294
Query: 243 AKTELNITSLFAKRLTVQGIV 263
+ ++ L T+ G+V
Sbjct: 295 TTAQFDVNDLLLGGKTILGVV 315
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 3e-21
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 39/270 (14%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
+A V+ + + +Q + + + +VL++V +++N D L +YP
Sbjct: 5 QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF-- 62
Query: 56 GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLP 107
PG++ +G ++S R++ GD+V + G GGY+E + ++P
Sbjct: 63 ----VPGIDLAGVVVS--SQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEWLVP 114
Query: 108 VPSGVSLKDAAAFPEVACTVWSTV--FMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQG 164
+P G++LK+A A T ++ L+P LV G + G+G+ A+ M +G
Sbjct: 115 LPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRG 174
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DVILDCMGASY 220
V + G + + LGA + ED + E K +D +G
Sbjct: 175 YTVEASTGKAAEHDYLRVLGAKEVLA--REDVM----AERIRPLDKQRWAAAVDPVGGRT 228
Query: 221 FQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250
L + G + + G GGA+ + T
Sbjct: 229 LATVLSRMRYGGAVAVSGLTGGAE--VPTT 256
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 4e-21
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 37/269 (13%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
+A+ + + ++ + + D VLIKV + +N D L K YP
Sbjct: 6 QALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPL-- 63
Query: 56 GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLP 107
G++ +GT++S N R+ GD+V + GG +E +VP ++P
Sbjct: 64 ----ILGIDAAGTVVS--SNDPRFAEGDEV--IATSYELGVSRDGGLSEYASVPGDWLVP 115
Query: 108 VPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQG 164
+P +SLK+A + T + LSP + S LV G + G+G A+ M +G
Sbjct: 116 LPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRG 175
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DVILDCMGASY 220
V + G+ E K LGA I+ ED + T K +D +G
Sbjct: 176 YDVVASTGNREAADYLKQLGASEVIS--REDVY----DGTLKALSKQQWQGAVDPVGGKQ 229
Query: 221 FQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
L + G + + G GG + +
Sbjct: 230 LASLLSKIQYGGSVAVSGLTGGGEVPATV 258
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 9e-21
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 39/270 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPP 54
M+A+++ Q + +Q +E+ Q+ +V + V ++LN D L G +P
Sbjct: 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFP-- 58
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVL 106
PG++ +GT+ + R+ G +V LL G GG AE+ V ++
Sbjct: 59 ----MIPGIDFAGTVHA--SEDPRFHAGQEV--LLTGWGVGENHWGGLAERARVKGDWLV 110
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQ 163
+P+G+S ++A T V + + P + +V G S G+G+ A+ +
Sbjct: 111 ALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL 170
Query: 164 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DVILDCMGAS 219
G +V +G E K LGA+ ++ ++F K + +D +G
Sbjct: 171 GYQVAAVSGRESTHGYLKSLGANRILS--RDEF------AESRPLEKQLWAGAIDTVGDK 222
Query: 220 YFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
+ L +N G + G GG +
Sbjct: 223 VLAKVLAQMNYGGCVAACGLAGGFALPTTV 252
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 1e-19
Identities = 57/277 (20%), Positives = 99/277 (35%), Gaps = 51/277 (18%)
Query: 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTIL 70
+ +L+ VE P +K+ EVL++ ++ D R + K + G
Sbjct: 22 TQSDFELKTVELPPLKNGEVLLEALFLSV---DPYMR-IASKRLKEGAVMMGQ------- 70
Query: 71 SVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPV----PSGVSLKDA----- 117
V + S + G V L G+ + + P + L A
Sbjct: 71 QVARVVESKNSAFPAGSIV---LAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIG 127
Query: 118 -------AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT 170
EV + GE+ LV + +G+ Q+ K +G +V
Sbjct: 128 MPGLTAYFGLLEVC-----------GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 176
Query: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230
AGS+EK+A K +G D NYKT + + ++ G D D +G + L +
Sbjct: 177 AGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKD 236
Query: 231 DGRLFIIG------TQGGAKTELNITSLFAKRLTVQG 261
G++ I G + S+ K+L ++G
Sbjct: 237 FGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEG 273
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-17
Identities = 54/269 (20%), Positives = 97/269 (36%), Gaps = 60/269 (22%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-------DEVLIKVEATALNRADTLQRKGSYPP 53
+ +V G EV Q+++ P+++D V++KV +T + +D +G
Sbjct: 3 NRGVVYLGSGKVEV---QKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 59
Query: 54 PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-------------------------- 87
G G E +G ++ G++V ++GD V
Sbjct: 60 QVGLVL--GHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPA 117
Query: 88 ---------LLGG--GGYAEKVAVPAGQV--LPVPSGVS----LKDAAAFPEVACTVWST 130
+G GG AE V VP L +P ++D ++ T +
Sbjct: 118 RAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHG 177
Query: 131 VFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188
+T+ + PG + V G +G +G A + G V V + +LA K G ++
Sbjct: 178 A-VTAGVGPGSTVYVAG--AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA 234
Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMG 217
++ G VD +D +G
Sbjct: 235 DLSLDTPLHEQIAALLGEPEVDCAVDAVG 263
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 4e-17
Identities = 63/340 (18%), Positives = 112/340 (32%), Gaps = 87/340 (25%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDD------EVLIKVEATALNRADTLQRKGSYPPP 54
K++V V + V P+++ + V++KV +T + +D +G + P
Sbjct: 3 NKSVVYHGTRDLRV---ETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVP 59
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA--------------------------- 87
KG G E +G ++ G +V +GD V
Sbjct: 60 KGHVL--GHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNP 117
Query: 88 ---------LLGG--GGYAEKVAVPAGQV--LPVPSGVS----LKDAAAFPEVACTVWST 130
L G GG AE V VP L +KD ++ T +
Sbjct: 118 DADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHG 177
Query: 131 VFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188
+ PG + G +G +G A + G V V + E+L + D G +
Sbjct: 178 CVSA-GVKPGSHVYIAG--AGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI 234
Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMG--------ASYFQRNLGSLN--ID-----GR 233
+ ++ + G VD +D +G + + G+LN D G
Sbjct: 235 DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGA 294
Query: 234 LFIIGTQGGA------------KTELNITSLFAKRLTVQG 261
+ I G G+ + L+ ++ K + +
Sbjct: 295 IGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMT 334
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-16
Identities = 53/278 (19%), Positives = 94/278 (33%), Gaps = 35/278 (12%)
Query: 11 SPEVLQLQEVEDPQ---IKDDEVLIKVEATAL---NRA---DTLQRKGSYPPP-KGASPY 60
+ + VL+K + R + P
Sbjct: 19 TESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPI 78
Query: 61 PGLECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G V + +K GD + ++ Y+ + + V L
Sbjct: 79 QGY-------GVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSY 131
Query: 117 A---AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
P + T ++ + GE+ V S +G Q+ K G V +AGS
Sbjct: 132 YTGLLGMPGM--TAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189
Query: 174 EEKLAVCKD-LGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
+EK+ + K G D NYK E D A +K G+D+ + +G L ++N+
Sbjct: 190 KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF-PNGIDIYFENVGGKMLDAVLVNMNMH 248
Query: 232 GRLFIIGT-----QGGAKTELNITSLFAKRLTVQG-IV 263
GR+ + G + N++++ KR +QG +V
Sbjct: 249 GRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVV 286
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-16
Identities = 67/304 (22%), Positives = 110/304 (36%), Gaps = 60/304 (19%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA+ P L+ ++ + ++V I++ + +D Q + + + YP
Sbjct: 24 KAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW----AGTVYP 77
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG----- 91
G E G +++VG V ++ GD V C + G
Sbjct: 78 CVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSP 137
Query: 92 ---------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSP 139
GGY++++ V VL + A A P + C T +S P
Sbjct: 138 TPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA-P-LLCAGITTYSP-LRHWQAGP 194
Query: 140 GESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198
G+ V G G G+G I++ G V SE K K LGAD +N + D +A
Sbjct: 195 GKKVGVVGIG--GLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA 252
Query: 199 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 257
K D IL+ + A + L DG + ++G + +L KR
Sbjct: 253 AHL-----KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRR 307
Query: 258 TVQG 261
+ G
Sbjct: 308 AIAG 311
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-16
Identities = 50/281 (17%), Positives = 98/281 (34%), Gaps = 38/281 (13%)
Query: 11 SPEVLQLQEVEDPQ-IKDDEVLIKVEATAL-----NRADTLQRKGSYPPPKGASPYPGLE 64
E +++EV P I + +V ++ ++ R + P + + G
Sbjct: 25 VAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG- 83
Query: 65 CSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
+G + GD V + + KV + + V + + F
Sbjct: 84 ------GIGIIEESKHTNLTKGDFVTSFYWP--WQTKVILDGNSLEKVDPQLVDGHLSYF 135
Query: 121 PEVA----CTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGS 173
T + H++ G ++ +V G + G+ A Q+G G RV G+
Sbjct: 136 LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT 195
Query: 174 EEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
EK + LG D INYK ++ +++E GVDV D +G + + +N +
Sbjct: 196 HEKCILLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENS 254
Query: 233 RLFIIGT---------QGGAKTELNITSLFAKRLTVQG-IV 263
+ + G + + +T + +V
Sbjct: 255 HIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLV 295
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-15
Identities = 66/275 (24%), Positives = 95/275 (34%), Gaps = 70/275 (25%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V + G P ++ EV P K EV IK+ ATA+ D G+ P +
Sbjct: 7 CKAAVAWEAGKPLSIEEIEVAPP--KAHEVRIKIIATAVCHTDAYTLSGADPEG----CF 60
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G +G + SVG+ V++ K GD V C
Sbjct: 61 PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 88 ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
+G ++E V V + L C +
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLL---GCGIST 177
Query: 128 -WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
+ T+ L PG V G G G+G I K G R+ +++K A K+ G
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLG--GVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG 235
Query: 185 ADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
A CIN + + E T G GVD +C+G
Sbjct: 236 ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-15
Identities = 66/279 (23%), Positives = 97/279 (34%), Gaps = 75/279 (26%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA + + GSP L ++E+E K EV I+V AT + D +
Sbjct: 9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-----LF 61
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G EC+G + SVG V+ +K GD+V C
Sbjct: 62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 88 ----------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
+G +++ V + V +L+ C
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI---GC 178
Query: 126 TV---WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVC 180
+ T+ ++PG + V G G +G AI K G R+ + EK
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLG--CVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236
Query: 181 KDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
K LGA C+N + D + E T G GVD LDC G
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAG-GVDYSLDCAG 274
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-15
Identities = 64/303 (21%), Positives = 112/303 (36%), Gaps = 59/303 (19%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
P L + ++V I++ + D Q K G S YP
Sbjct: 11 TGWAARDPSGI--LSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDL----GMSNYP 64
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG----- 91
G E G ++ VG +VS++ VGD V C
Sbjct: 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 92 --------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPG 140
GG+A+ V V+ +P G++++ AA P + C TV+S + PG
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA--P-LLCAGVTVYSPLSHFGLKQPG 181
Query: 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVAR 199
+ G G+G +++ K G V V + S +K +DLGAD + + ++
Sbjct: 182 LRGGI-LGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240
Query: 200 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 258
+ + +D ++D + + + L L +DG+L ++G + L R
Sbjct: 241 LADS-----LDYVIDTVPVHHALEPYLSLLKLDGKLILMG-VINNPLQFLTPLLMLGRKV 294
Query: 259 VQG 261
+ G
Sbjct: 295 ITG 297
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 7e-15
Identities = 58/282 (20%), Positives = 92/282 (32%), Gaps = 67/282 (23%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
K I + + + +VLI + + +D + YP
Sbjct: 6 KGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEW----KEGIYP 59
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV-----------CA-------------------- 87
G E +G I VGK V ++K+GD V C
Sbjct: 60 MIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCL 119
Query: 88 --LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLS 138
GGY+ + V V+ V L+ A P + C T +S S ++
Sbjct: 120 DSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA--P-LLCAGITTYSP-LKFSKVT 175
Query: 139 PGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197
G V G G G+G+ A++ G V V A +E K +G F
Sbjct: 176 KGTKVGVAGFG--GLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK--------HFY 225
Query: 198 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 238
K+ +D I+ + Y + L L +G L ++G
Sbjct: 226 TDPKQCKE--ELDFIISTIPTHYDLKDYLKLLTYNGDLALVG 265
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 9e-15
Identities = 58/275 (21%), Positives = 98/275 (35%), Gaps = 71/275 (25%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V+ + P ++EVE K EV IK+ AT + R+D G+ P
Sbjct: 9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-----L 61
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G E +G + S+G+ V+ + GD+V C
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 88 ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
LG +++ V V + + L+ C
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLI---GCGFST 178
Query: 128 -WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
+ + + ++ G + V G G G+G I K G R+ +++K A K++G
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLG--GVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 185 ADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
A C+N + + E + G GVD + +G
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEVIG 270
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-14
Identities = 65/274 (23%), Positives = 97/274 (35%), Gaps = 72/274 (26%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V +P P L+ V P K EV IK+ A+ + +D+ K P +P
Sbjct: 11 KAAVAWEPHKPLSLETITVAPP--KAHEVRIKILASGICGSDSSVLKEIIPS-----KFP 63
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV-------------CA------------------ 87
G E G + S+G V+ K GD+V C
Sbjct: 64 VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123
Query: 88 -----------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
L+G + E V V + L ++ C
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLI---GCGFATG 179
Query: 128 WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGA 185
+ T+ ++PG + V G G G+G AI K G R+ ++K +LGA
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLG--GVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA 237
Query: 186 DVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
C+N K D + E+T G GVD ++C G
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNG-GVDYAVECAG 270
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-14
Identities = 66/303 (21%), Positives = 103/303 (33%), Gaps = 59/303 (19%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
L +++V KV + +D K + G S YP
Sbjct: 18 FGWAARDQSGH--LSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDW----GFSMYP 71
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV-----------CA-------------------- 87
G E G + VG V + VGD+V C
Sbjct: 72 LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131
Query: 88 -LLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPG 140
G GGY+ + ++ P + L A P + C TV+S + PG
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGA--P-LLCAGITVYSPLKYFGLDEPG 188
Query: 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVAR 199
+ + G G+G A++ K G +V V + S K K+ GAD + + ++ +
Sbjct: 189 KHIGI-VGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA 247
Query: 200 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 258
+D I+D + A + G L G+L ++G EL SL A R
Sbjct: 248 AAGT-----LDGIIDTVSAVHPLLPLFGLLKSHGKLILVG-APEKPLELPAFSLIAGRKI 301
Query: 259 VQG 261
V G
Sbjct: 302 VAG 304
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-13
Identities = 54/275 (19%), Positives = 88/275 (32%), Gaps = 70/275 (25%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V + P L ++E+E +E+ IK+ AT + D +
Sbjct: 9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD----GF 62
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G E +G + SVG V+ ++ G++V C
Sbjct: 63 PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122
Query: 88 ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
LG +++ V V + L C V
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLL---GCGVST 179
Query: 128 -WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
+ T+ + PG + V G G +G A+ G R+ + +K K G
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLG--AVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG 237
Query: 185 ADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
A +N + + T G GVD L+C+G
Sbjct: 238 ATDFVNPNDHSEPISQVLSKMTNG-GVDFSLECVG 271
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 3e-13
Identities = 64/310 (20%), Positives = 110/310 (35%), Gaps = 69/310 (22%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+ I I + + + + D ++ IK+EA + +D G + G P
Sbjct: 8 EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW----GNMKMP 63
Query: 62 ---GLECSGTILSVGKNV-SRWKVGDQV----------------------CALLGG---- 91
G E G ++ +G S KVG +V C
Sbjct: 64 LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123
Query: 92 ---------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSP 139
GGYA V V V+P+P + AA P + C TV+S + + P
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA--P-LLCGGLTVYSP-LVRNGCGP 179
Query: 140 GESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198
G+ + G G GIG+ + K G +V + S K +GAD ++A
Sbjct: 180 GKKVGIVGLG--GIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD--------HYIA 229
Query: 199 RVKEETGGKGV----DVILDCMGASY---FQRNLGSLNIDGRLFIIGTQGGAKTELNITS 251
++E G+ D+I+ C + F ++ + GR+ I L++
Sbjct: 230 TLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSIS-IPEQHEMLSLKP 288
Query: 252 LFAKRLTVQG 261
K +++
Sbjct: 289 YGLKAVSISY 298
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 4e-04
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186
+ + S LV GG+ GIG A G +V +T S E + D
Sbjct: 9 HHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFAD-AGDKVAITYRSGEPPEGFLAVKCD 67
Query: 187 VCINYKTEDFVARVKEETGGKGVDV 211
+ + E ++E G V+V
Sbjct: 68 ITDTEQVEQAYKEIEETHG--PVEV 90
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 5e-04
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 134 TSHLSPGESFLVHGGSSGIGT-FAIQMGKCQGVRVFVTAGSEEKL-AVCKDL-------- 183
SH+S ++ V G SSGIG A + +G+ V+ A + + A L
Sbjct: 18 GSHMSRPQTAFVTGVSSGIGLAVARTLAA-RGIAVYGCARDAKNVSAAVDGLRAAGHDVD 76
Query: 184 --GADVCINYKTEDFVARVKEETGGKGVDV 211
DV + VA E G + +
Sbjct: 77 GSSCDVTSTDEVHAAVAAAVERFG--PIGI 104
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 274 | |||
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.98 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.89 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.07 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 99.01 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.99 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.97 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.96 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.93 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.91 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.88 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.85 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.84 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.8 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.77 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.76 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.73 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.7 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.68 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.67 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.67 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.65 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.63 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.61 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.6 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.59 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.59 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.58 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.58 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.54 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.54 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.51 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.5 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.5 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.49 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.46 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.46 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.46 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.45 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.44 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.44 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.44 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.42 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.41 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.41 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.41 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.4 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.4 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.39 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.38 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.38 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.37 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.37 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.37 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.37 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.37 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.37 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.36 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.36 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.36 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.36 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.36 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.36 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.36 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.36 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.36 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.36 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.35 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.35 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.34 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.34 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.34 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.34 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.34 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.34 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.34 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.33 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.33 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.33 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.32 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.32 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.32 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.32 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.32 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.32 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.32 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.32 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.32 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.32 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.32 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.32 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.31 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.31 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.31 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.31 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.31 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.3 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.3 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.3 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.3 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.3 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.29 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 98.29 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.29 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.29 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.29 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.29 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.29 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.29 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.29 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.29 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.28 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.28 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.28 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.27 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.27 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.27 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.27 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.27 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.26 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.26 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.26 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.26 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.26 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.26 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.26 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.25 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.25 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.25 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.25 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.25 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 98.24 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.24 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.24 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.24 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.23 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.23 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 98.23 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.23 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.23 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.23 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.23 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.23 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.22 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.22 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.22 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.21 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.21 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.21 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 98.21 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.21 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.21 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.21 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.21 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.21 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.2 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.2 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.2 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.2 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.2 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.2 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.2 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.2 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.2 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.2 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.19 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.19 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.19 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.19 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.18 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.17 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.17 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.17 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.17 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.17 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.17 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.16 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.16 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.15 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.15 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.15 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.15 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.15 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.15 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.15 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.14 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.14 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.14 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.13 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.13 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.12 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.12 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 98.11 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.11 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.11 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.1 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.1 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.1 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.1 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.1 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.1 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.09 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.09 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 98.08 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.08 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.07 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.06 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.06 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.06 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.04 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.03 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.02 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.02 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.01 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.01 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.01 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.99 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 97.98 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 97.98 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.98 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 97.97 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 97.96 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 97.95 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 97.94 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.94 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.94 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.93 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.92 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.92 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.92 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.92 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.92 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 97.91 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 97.9 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.89 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.88 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 97.88 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.86 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 97.86 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.85 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 97.85 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.84 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 97.83 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.81 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.8 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 97.8 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.8 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.79 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 97.79 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 97.77 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 97.76 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.76 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.76 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.75 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 97.75 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.75 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 97.75 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.73 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 97.73 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 97.72 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 97.7 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 97.7 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 97.69 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 97.68 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 97.67 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 97.67 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.67 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.67 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 97.66 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 97.64 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.62 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 97.61 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.61 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 97.59 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 97.59 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 97.59 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 97.57 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 97.57 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 97.56 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 97.55 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.53 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.52 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 97.52 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 97.51 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 97.51 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 97.51 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 97.5 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 97.49 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 97.49 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 97.46 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 97.46 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 97.45 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.45 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.45 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.45 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.44 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 97.44 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 97.42 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 97.42 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.42 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.42 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.41 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 97.41 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 97.4 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.38 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 97.37 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 97.35 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 97.35 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 97.34 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 97.33 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 97.33 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.32 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 97.32 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.32 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 97.32 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 97.31 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 97.3 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.28 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 97.28 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.27 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 97.27 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 97.27 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.27 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 97.25 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 97.24 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.24 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 97.23 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 97.22 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.19 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 97.18 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 97.16 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 97.16 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.16 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 97.16 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 97.15 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.14 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 97.13 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 97.13 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 97.12 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 97.11 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 97.11 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 97.11 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 97.08 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.08 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.08 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.08 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 97.07 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.07 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.06 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 97.06 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 97.06 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 97.05 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 97.05 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 97.04 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 97.04 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.03 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 97.02 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 97.01 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.97 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 96.96 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.95 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 96.94 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 96.93 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.92 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.91 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 96.89 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.89 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.88 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 96.86 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.84 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 96.84 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 96.83 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.83 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 96.8 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.8 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.77 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.77 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 96.75 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.73 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.72 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.72 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.69 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.68 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 96.68 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.67 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.67 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.67 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.66 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.66 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 96.66 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.65 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 96.64 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 96.64 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.61 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 96.61 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.61 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.61 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.6 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.59 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 96.58 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.57 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 96.57 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 96.56 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 96.56 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 96.56 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.54 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 96.49 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.49 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.48 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.47 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.45 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 96.43 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.42 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 96.41 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 96.39 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.38 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 96.38 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.37 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.36 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.34 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.33 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.33 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.32 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 96.31 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.3 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 96.29 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.28 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 96.27 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.25 |
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-51 Score=352.10 Aligned_cols=265 Identities=49% Similarity=0.815 Sum_probs=248.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus 29 MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~ 108 (353)
T 4dup_A 29 MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYA 108 (353)
T ss_dssp EEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSCC
T ss_pred eeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCCC
Confidence 89999999998888999999999999999999999999999999999998876666789999999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||||+++..+|+|+||+++|.+.++++|+++++++|++++++++|+|+++.+.+++++|++|||+|++|++|++++|++
T Consensus 109 vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a 188 (353)
T 4dup_A 109 VGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLA 188 (353)
T ss_dssp TTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred CCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 99999999889999999999999999999999999999999999999999988899999999999998999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++|+++++++++++.++++|++.+++.++.++.+.+.+.+ +.++|++|||+|...+..++++++++|+++.+|..
T Consensus 189 ~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 189 RAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp HHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCT
T ss_pred HHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCCceEEEECCCHHHHHHHHHHhccCCEEEEEEec
Confidence 99999999999999999999999999999999999999998888 66899999999998899999999999999999987
Q ss_pred CCCccc-cchhhHhhcceEEEEeeccc
Q 024011 241 GGAKTE-LNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 241 ~~~~~~-~~~~~~~~~~~~i~g~~~~~ 266 (274)
.+.... ++...++.+++++.|+....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~i~g~~~~~ 294 (353)
T 4dup_A 268 GGAVAEKVNLSPIMVKRLTVTGSTMRP 294 (353)
T ss_dssp TCSEEEEEECHHHHHTTCEEEECCSTT
T ss_pred CCCcccCCCHHHHHhcCceEEEEeccc
Confidence 765544 78888899999999987643
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-51 Score=349.18 Aligned_cols=262 Identities=31% Similarity=0.497 Sum_probs=237.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++ |+
T Consensus 22 MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~~ 100 (342)
T 4eye_A 22 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-IK 100 (342)
T ss_dssp EEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-CC
T ss_pred eEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-CC
Confidence 89999999998888999999999999999999999999999999999998765556799999999999999999999 99
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||||+++..+|+|+||++++.+.++++|+++++++|++++++++|+|+++.+..++++|++|||+|++|++|++++|++
T Consensus 101 vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a 180 (342)
T 4eye_A 101 PGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIA 180 (342)
T ss_dssp TTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred CCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 99999999888999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++|+++++++++++.++++|++.+++.+ .++.+.+.+.+++.++|++|||+|...+..++++++++|+++.+|..
T Consensus 181 ~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~ 259 (342)
T 4eye_A 181 KGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA 259 (342)
T ss_dssp HHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---
T ss_pred HHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEcc
Confidence 99999999999999999999999999999988 88899999988888899999999998899999999999999999987
Q ss_pred CCCccccchhhHhhcceEEEEeec
Q 024011 241 GGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.+....++...++.+++++.|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~i~g~~~ 283 (342)
T 4eye_A 260 AGGIPTIKVNRLLLRNASLIGVAW 283 (342)
T ss_dssp -------CCCCGGGTTCEEEECCH
T ss_pred CCCCCccCHHHHhhcCCEEEEEeh
Confidence 655456777778889999999874
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-50 Score=344.26 Aligned_cols=265 Identities=42% Similarity=0.725 Sum_probs=243.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCC-CCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV-SRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~-~~~ 79 (274)
||++++++++.++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++ +.|
T Consensus 23 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 102 (354)
T 2j8z_A 23 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHW 102 (354)
T ss_dssp EEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--CC
T ss_pred eeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCCC
Confidence 8999999998877899999999999999999999999999999999999776544578999999999999999999 999
Q ss_pred CCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
++||||+++..+|+|+||+++|.+.++++|+++++++|++++++++|||+++.+..++++|+++||+|++|++|++++|+
T Consensus 103 ~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~ 182 (354)
T 2j8z_A 103 KIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQL 182 (354)
T ss_dssp CTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred CCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHH
Confidence 99999999987899999999999999999999999999999999999999998788999999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++|+++++++++++.++++|++.++|.+..++.+.+.+.+.+.++|++|||+|...+..++++++++|+++.+|.
T Consensus 183 a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 183 TRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCC
T ss_pred HHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEec
Confidence 99999999999999999999999999999998888888888888776789999999999888899999999999999998
Q ss_pred CCCCccccch-hhHhhcceEEEEeecc
Q 024011 240 QGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 240 ~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
..+....++. ..++.+++++.|+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~i~g~~~~ 289 (354)
T 2j8z_A 263 MGGGDINGPLFSKLLFKRGSLITSLLR 289 (354)
T ss_dssp TTCSCCCSCHHHHHHHTTCEEEECCST
T ss_pred cCCCccCCChhHHHHhCCCEEEEEEcc
Confidence 7655456777 7788899999998653
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-50 Score=345.21 Aligned_cols=263 Identities=30% Similarity=0.471 Sum_probs=242.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++ +++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus 28 mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 106 (363)
T 3uog_A 28 MQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFR 106 (363)
T ss_dssp EEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred hEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCC
Confidence 899999987 4456999999999999999999999999999999999998775567799999999999999999999999
Q ss_pred CCCEEEEEe------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcC
Q 024011 81 VGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH 136 (274)
Q Consensus 81 ~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~ 136 (274)
+||||++.. .+|+|+||+++|.+.++++|+++++++||+++++++|+|+++.+..+
T Consensus 107 vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~ 186 (363)
T 3uog_A 107 PGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGH 186 (363)
T ss_dssp TTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTC
T ss_pred CCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcC
Confidence 999999861 25899999999999999999999999999999999999999988889
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++|++|||+| +|++|++++|+++..|++|+++++++++++.++++|++.++|.+..++.+.+.+.+++.++|++||++
T Consensus 187 ~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 187 LRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp CCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 99999999999 69999999999999999999999999999999999999999966678999999999888899999999
Q ss_pred ChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 217 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 217 g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
|...+..++++++++|+++.+|...+....++...++.+++++.|+...
T Consensus 266 g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 314 (363)
T 3uog_A 266 GGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVG 314 (363)
T ss_dssp TSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCC
T ss_pred ChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecC
Confidence 9878899999999999999999877655678888889999999998754
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=339.73 Aligned_cols=261 Identities=32% Similarity=0.430 Sum_probs=241.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++++.+++++.+.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 80 (325)
T 3jyn_A 2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTRFK 80 (325)
T ss_dssp EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCC
Confidence 89999999999888999999999999999999999999999999999998765 35689999999999999999999999
Q ss_pred CCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
+||||+... .+|+|+||+++|.+.++++|+++++++|+++++..+|+|+++.+..++++|+++||+|++|++|++++|+
T Consensus 81 ~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~ 160 (325)
T 3jyn_A 81 VGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQW 160 (325)
T ss_dssp TTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred CCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 999998764 4799999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++|+++++++++++.++++|++.++|.++.++.+.+.+.+++.++|++|||+|...+..++++++++|+++.+|.
T Consensus 161 a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 161 AKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEec
Confidence 99999999999999999999999999999999999999999999888889999999999888999999999999999998
Q ss_pred CCCCccccchhhHhhc-ceEEEEe
Q 024011 240 QGGAKTELNITSLFAK-RLTVQGI 262 (274)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~i~g~ 262 (274)
..+....++...++.+ ++.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ 264 (325)
T 3jyn_A 241 ASGPVSGVNLGILAQKDSVYVTRP 264 (325)
T ss_dssp TTCCCCSCCTHHHHHTTSCEEECC
T ss_pred CCCCCCCCCHHHHhhcCcEEEEee
Confidence 7765446777777766 5666544
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=338.00 Aligned_cols=261 Identities=31% Similarity=0.452 Sum_probs=242.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|+++++|+
T Consensus 9 mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~P~i~G~e~~G~V~~vG~~v~~~~ 86 (334)
T 3qwb_A 9 QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC--EKPYVLGREASGTVVAKGKGVTNFE 86 (334)
T ss_dssp EEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC--CSSEECCSEEEEEEEEECTTCCSCC
T ss_pred eEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCccccceEEEEEEECCCCCCCC
Confidence 89999999998888999999999999999999999999999999999997763 4689999999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeee-CCCeEECCCCCCHHh---hccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVP-AGQVLPVPSGVSLKD---AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~-~~~~~~~p~~~~~~~---aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~ 156 (274)
+||||+++. +|+|+||++++ .+.++++|+++++++ ++++++..+++|+++.+..++++|+++||+|++|++|+++
T Consensus 87 ~GdrV~~~~-~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~ 165 (334)
T 3qwb_A 87 VGDQVAYIS-NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL 165 (334)
T ss_dssp TTCEEEEEC-SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHH
T ss_pred CCCEEEEee-CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHH
Confidence 999999885 79999999999 999999999999999 8888899999999998888999999999999999999999
Q ss_pred HHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEE
Q 024011 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 157 ~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (274)
+|+++..|++|+++++++++++.++++|++.+++.++.++.+.+.+.+++.++|++|||+|...+..++++++++|+++.
T Consensus 166 ~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 166 NQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245 (334)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEE
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999999999999999999999999999888889999999999889999999999999999
Q ss_pred EecCCCCccccchhhHhhcceEEEEeec
Q 024011 237 IGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|...+....++...++.+++++.++..
T Consensus 246 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (334)
T 3qwb_A 246 FGNASGLIPPFSITRLSPKNITLVRPQL 273 (334)
T ss_dssp CCCTTCCCCCBCGGGGTTTTCEEECCCG
T ss_pred EcCCCCCCCCcchhhhhhCceEEEEEEe
Confidence 9987765557788888889999987654
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-49 Score=337.14 Aligned_cols=262 Identities=32% Similarity=0.539 Sum_probs=239.1
Q ss_pred CEEEEEcCCCCCcceEE-EeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~-~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||++++++++++.+++ ++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|
T Consensus 30 Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~ 109 (351)
T 1yb5_A 30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 109 (351)
T ss_dssp EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred EEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCCC
Confidence 89999999888878999 89999999999999999999999999999998765444578999999999999999999999
Q ss_pred CCCCEEEEEec-CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHH
Q 024011 80 KVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (274)
Q Consensus 80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~ 158 (274)
++||||++... +|+|+||+++|.+.++++|+++++++||+++++++|||+++.+..++++|++++|+|++|++|++++|
T Consensus 110 ~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~ 189 (351)
T 1yb5_A 110 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ 189 (351)
T ss_dssp CTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHH
Confidence 99999988753 69999999999999999999999999999999999999999878899999999999999999999999
Q ss_pred HHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEe
Q 024011 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 159 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g 238 (274)
+++..|++|+++++++++++.++++|++.++|.++.++.+.+.+.++++++|++|||+|...+..++++++++|+++.+|
T Consensus 190 ~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 190 IARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEe
Confidence 99999999999999999999999999999999888888888888887778999999999888888999999999999999
Q ss_pred cCCCCccccchhhHhhcceEEEEeec
Q 024011 239 TQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
... ...++...++.+++++.|+..
T Consensus 270 ~~~--~~~~~~~~~~~~~~~i~g~~~ 293 (351)
T 1yb5_A 270 SRG--TIEINPRDTMAKESSIIGVTL 293 (351)
T ss_dssp CCS--CEEECTHHHHTTTCEEEECCG
T ss_pred cCC--CCccCHHHHHhCCcEEEEEEe
Confidence 643 245677778889999999853
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-49 Score=337.30 Aligned_cols=243 Identities=28% Similarity=0.380 Sum_probs=229.4
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++++++++ +.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|
T Consensus 5 mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~ 84 (340)
T 3gms_A 5 GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRE 84 (340)
T ss_dssp EEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCGG
T ss_pred cEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCCC
Confidence 799999999987 6799999999999999999999999999999999999877656789999999999999999999999
Q ss_pred CCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
++||||+++..+|+|+||+++|.+.++++|+++++++|++++...+|+|+++.+..++++|++|||+|++|++|++++|+
T Consensus 85 ~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~ 164 (340)
T 3gms_A 85 LIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQL 164 (340)
T ss_dssp GTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred CCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHH
Confidence 99999999888899999999999999999999999999999999999999998889999999999999988999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++|+++++++++++.++++|++.++|.+..++.+.+.+.+++.++|++|||+|.......+++++++|+++.+|.
T Consensus 165 a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 165 SQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEee
Confidence 99999999999999999999999999999999989999999999888889999999999887778899999999999998
Q ss_pred CCCC
Q 024011 240 QGGA 243 (274)
Q Consensus 240 ~~~~ 243 (274)
..+.
T Consensus 245 ~~~~ 248 (340)
T 3gms_A 245 LSGI 248 (340)
T ss_dssp TTSC
T ss_pred cCCC
Confidence 6643
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-49 Score=337.37 Aligned_cols=264 Identities=36% Similarity=0.564 Sum_probs=238.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence 99999999987777999999999999999999999999999999999987654345788999999999999999999999
Q ss_pred CCCEEE-------E--------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVC-------A--------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~-------~--------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||||+ + +..+|+|+||+++|.+.++++|+++++++|+++++++.|+|+++.+
T Consensus 81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~ 160 (343)
T 2eih_A 81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD 160 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred CCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence 999998 3 2236999999999999999999999999999999999999999977
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
..++++|+++||+|++|++|++++|+++..|++|+++++++++++.++++|++.++|.++.++.+.+.+.+++.++|++|
T Consensus 161 ~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 161 KLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp TSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEE
Confidence 67899999999999999999999999999999999999999999999999999999988778888888877666899999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|++|...+..+++.++++|+++.+|...+....++...++.+++++.|+..
T Consensus 241 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 291 (343)
T 2eih_A 241 DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTM 291 (343)
T ss_dssp ESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCS
T ss_pred ECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecC
Confidence 999976788999999999999999987654445777778889999999764
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-49 Score=335.87 Aligned_cols=264 Identities=28% Similarity=0.454 Sum_probs=235.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC-CCC-CCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PPP-KGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~-~~~-~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||+++++++.++.+++++.|.|+|++|||+|||.++|||++|++.+.|.+ +.. ..+|.++|||++|+|+++|+++++
T Consensus 2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (333)
T 1wly_A 2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD 81 (333)
T ss_dssp CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence 899999999887789999999999999999999999999999999998866 221 346889999999999999999999
Q ss_pred CCCCCEEEEEec-CCeeeeEEeeeCCCeEECCCCCCHHh--hccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 79 WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKD--AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 79 ~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
|++||||+.... +|+|+||+++|.+.++++|+++++++ |++++++++|+|+++.+..++++|++++|+|++|++|++
T Consensus 82 ~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~ 161 (333)
T 1wly_A 82 FTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI 161 (333)
T ss_dssp CCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHH
T ss_pred CCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHH
Confidence 999999977644 79999999999999999999999999 888999999999999878899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++|+++..|++|+++++++++++.++++|++.++|.++.++.+.+.+.+.+.++|++|||+|...+..++++++++|+++
T Consensus 162 ~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv 241 (333)
T 1wly_A 162 MVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCA 241 (333)
T ss_dssp HHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEE
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEE
Confidence 99999999999999999999999999999999999888888888888877678999999999977899999999999999
Q ss_pred EEecCCCCccccchh-hHhhcc--eEEEEeec
Q 024011 236 IIGTQGGAKTELNIT-SLFAKR--LTVQGIVP 264 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~-~~~~~~--~~i~g~~~ 264 (274)
.+|...+....++.. .++.++ +++.|++.
T Consensus 242 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 273 (333)
T 1wly_A 242 AYGHASGVADPIRVVEDLGVRGSLFITRPALW 273 (333)
T ss_dssp ECCCTTCCCCCCCHHHHTTTTTSCEEECCCGG
T ss_pred EEecCCCCcCCCChhHhhhhcCCcEEEEEeeh
Confidence 999876544466776 777888 89988754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=330.40 Aligned_cols=260 Identities=33% Similarity=0.470 Sum_probs=235.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++.++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (327)
T 1qor_A 2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIK 80 (327)
T ss_dssp CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCC
Confidence 99999999988778999999999999999999999999999999999987642 34688999999999999999999999
Q ss_pred CCCEEEEEe--cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHH
Q 024011 81 VGDQVCALL--GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (274)
Q Consensus 81 ~Gd~V~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~ 158 (274)
+|||| +++ .+|+|+||+++|.+.++++|+++++++|++++++++|+|+++.+..++++|+++||+|++|++|++++|
T Consensus 81 ~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~ 159 (327)
T 1qor_A 81 AGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159 (327)
T ss_dssp TTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHH
T ss_pred CCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHH
Confidence 99999 554 469999999999999999999999999999999999999999778899999999999999999999999
Q ss_pred HHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEe
Q 024011 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 159 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g 238 (274)
+++..|++|+++++++++++.++++|++.++|.++.++.+.+.+.+.+.++|++|||+|...+..++++++++|+++.+|
T Consensus 160 ~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 160 WAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp HHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECC
T ss_pred HHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999888888888888877678999999999777899999999999999999
Q ss_pred cCCCCccccchhhHhhc-ceEEEEe
Q 024011 239 TQGGAKTELNITSLFAK-RLTVQGI 262 (274)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-~~~i~g~ 262 (274)
...+....++...++.+ ++++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (327)
T 1qor_A 240 NSSGAVTGVNLGILNQKGSLYVTRP 264 (327)
T ss_dssp CTTCCCCCBCTHHHHHTTSCEEECC
T ss_pred cCCCCCCccCHHHHhhccceEEEcc
Confidence 87654445777777777 7777754
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-48 Score=331.42 Aligned_cols=256 Identities=28% Similarity=0.487 Sum_probs=233.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCC-CCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP-KGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++++ +++++.|.|+|++|||+|||.+++||++|++.+.|..+.. ..+|.++|||++|+|+++|+++++|
T Consensus 8 mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~ 85 (343)
T 3gaz_A 8 MIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSF 85 (343)
T ss_dssp EEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred heEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCC
Confidence 899999998876 9999999999999999999999999999999999875432 4578999999999999999999999
Q ss_pred CCCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Q 024011 80 KVGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT 154 (274)
Q Consensus 80 ~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~ 154 (274)
++||||+++. .+|+|+||+++|.+.++++|+++++++|++++++++|+|+++.+..++++|++|||+|++|++|+
T Consensus 86 ~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~ 165 (343)
T 3gaz_A 86 RVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGH 165 (343)
T ss_dssp CTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHH
T ss_pred CCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHH
Confidence 9999999885 36999999999999999999999999999999999999999988889999999999998899999
Q ss_pred HHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEE
Q 024011 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (274)
Q Consensus 155 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (274)
+++|+++..|++|+++ +++++++.++++|++. ++ +..++.+.+.+.+++.++|++||++|+..+..++++++++|++
T Consensus 166 ~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~i 242 (343)
T 3gaz_A 166 VAIQIALARGARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHV 242 (343)
T ss_dssp HHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeE
Confidence 9999999999999999 8899999999999998 77 7778888888888888899999999988889999999999999
Q ss_pred EEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 235 FIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 235 v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+.+|... .++...+..+++++.|++..
T Consensus 243 v~~g~~~----~~~~~~~~~~~~~~~g~~~~ 269 (343)
T 3gaz_A 243 VSCLGWG----THKLAPLSFKQATYSGVFTL 269 (343)
T ss_dssp EESCCCS----CCCCHHHHHTTCEEEECCTT
T ss_pred EEEcccC----ccccchhhhcCcEEEEEEec
Confidence 9998754 45667788899999997653
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=336.62 Aligned_cols=263 Identities=25% Similarity=0.344 Sum_probs=234.8
Q ss_pred CEEEEEc--CC-CCCcceEEEee---------cCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEE
Q 024011 1 MKAIVIT--QP-GSPEVLQLQEV---------EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGT 68 (274)
Q Consensus 1 m~a~~~~--~~-~~~~~~~~~~~---------~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~ 68 (274)
|||++++ ++ +.++.+++++. |.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+
T Consensus 11 mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~ 90 (349)
T 3pi7_A 11 MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGT 90 (349)
T ss_dssp EEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEEE
T ss_pred heEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEEE
Confidence 8999999 54 24456777777 999999999999999999999999999998776567899999999999
Q ss_pred EEEecCCC-CCCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCC-CEE
Q 024011 69 ILSVGKNV-SRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG-ESF 143 (274)
Q Consensus 69 V~~vG~~~-~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g-~~v 143 (274)
|+++|+++ ++|++||||++.. .+|+|+||+++|.+.++++|+++++++|++++...+|||.++ +..+ ++| +++
T Consensus 91 V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~~v 168 (349)
T 3pi7_A 91 IVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVK-QEGEKAF 168 (349)
T ss_dssp EEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHHH-HHCCSEE
T ss_pred EEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHHh-hCCCCEE
Confidence 99999999 9999999999885 579999999999999999999999999999999999999766 4445 666 799
Q ss_pred EEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHH
Q 024011 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 223 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~ 223 (274)
+|+|++|++|++++|+++..|++|+++++++++++.++++|++.++|.+..++.+.+.+.+++.++|++|||+|...+..
T Consensus 169 li~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~~~~ 248 (349)
T 3pi7_A 169 VMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASA 248 (349)
T ss_dssp EESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChhHHH
Confidence 99999999999999999999999999999999999999999999999998999999998887678999999999988889
Q ss_pred hhhccccCCEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 224 NLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 224 ~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
++++++++|+++.+|........++. ..++.+++++.|+...
T Consensus 249 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 291 (349)
T 3pi7_A 249 IFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLS 291 (349)
T ss_dssp HHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHH
T ss_pred HHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEeh
Confidence 99999999999999977665566777 7888999999998753
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-47 Score=326.69 Aligned_cols=258 Identities=29% Similarity=0.427 Sum_probs=234.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus 3 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~ 80 (340)
T 3s2e_A 3 MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVK 80 (340)
T ss_dssp EEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred eEEEEEecCCCC--CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCC
Confidence 899999988765 899999999999999999999999999999999998776556799999999999999999999999
Q ss_pred CCCEEEEE----------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||+.. ..+|+|+||+++|.+.++++|+++++++|+++++++.|+|+++
T Consensus 81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l- 159 (340)
T 3s2e_A 81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL- 159 (340)
T ss_dssp TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-
T ss_pred CCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-
Confidence 99999432 1369999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+..++++|++|||+|+ |++|++++|+++..|++|+++++++++++.++++|++.++|.++.++.+.+.+..+ ++|++
T Consensus 160 ~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g--~~d~v 236 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIG--GAHGV 236 (340)
T ss_dssp HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHS--SEEEE
T ss_pred HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCC--CCCEE
Confidence 6678999999999997 89999999999999999999999999999999999999999998888888887443 69999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
||++|. ..++.++++++++|+++.+|...+ ...++...++.+++++.|++..
T Consensus 237 id~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~ 289 (340)
T 3s2e_A 237 LVTAVSPKAFSQAIGMVRRGGTIALNGLPPG-DFGTPIFDVVLKGITIRGSIVG 289 (340)
T ss_dssp EESSCCHHHHHHHHHHEEEEEEEEECSCCSS-EEEEEHHHHHHTTCEEEECCSC
T ss_pred EEeCCCHHHHHHHHHHhccCCEEEEeCCCCC-CCCCCHHHHHhCCeEEEEEecC
Confidence 999985 458899999999999999997664 3567778888999999998765
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=329.26 Aligned_cols=260 Identities=30% Similarity=0.480 Sum_probs=225.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++++.+++++.+.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus 4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (349)
T 4a27_A 4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYE 83 (349)
T ss_dssp EEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCC
T ss_pred eEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCC
Confidence 89999999998878999999999999999999999999999999999998776667899999999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||||+++..+|+|+||+++|.+.++++|++++++++++++++++|+|+++.+..++++|++|||+|++|++|++++|++
T Consensus 84 ~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla 163 (349)
T 4a27_A 84 IGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLC 163 (349)
T ss_dssp TTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred CCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 99999999888999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 161 KCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 161 ~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+..| .+|++++ ++++++.++ +|++.+++ ...++.+.+.+.++ .++|++|||+|+..+..++++++++|+++.+|.
T Consensus 164 ~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~-~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 164 STVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISA-EGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp TTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCT-TCEEEEEEECC-------CTTEEEEEEEEEEC-
T ss_pred HHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcC-CCceEEEECCCchhHHHHHHHhhcCCEEEEECC
Confidence 9985 5888877 667778887 99999999 77888888888764 589999999998888899999999999999987
Q ss_pred CCCC----------------ccccchhhHhhcceEEEEeec
Q 024011 240 QGGA----------------KTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~----------------~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.... ...++...++.+++++.|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~ 280 (349)
T 4a27_A 240 SNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSL 280 (349)
T ss_dssp ------------------------CHHHHHHHTCEEEEECH
T ss_pred CcccccccccccccccccccccccCHHHHhhcCceEEEEee
Confidence 5321 123566677888899998764
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=328.04 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=234.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-CCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-PKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++++ +++++.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|+++++|
T Consensus 1 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (345)
T 3jv7_A 1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF 78 (345)
T ss_dssp CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred CeEEEEcCCCCc--eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence 999999999876 899999999999999999999999999999999987652 34678999999999999999999999
Q ss_pred CCCCEEEEEe--------------------------------cCCeeeeEEeee-CCCeEECCCCCCHHhhccCcchHHH
Q 024011 80 KVGDQVCALL--------------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 80 ~~Gd~V~~~~--------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
++||||++.. .+|+|+||+++| .+.++++|+ +++++|++++++++|
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~t 157 (345)
T 3jv7_A 79 GVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLT 157 (345)
T ss_dssp CTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHH
T ss_pred CCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHH
Confidence 9999998742 369999999999 899999999 999999999999999
Q ss_pred HHHHHHh-hcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 127 VWSTVFM-TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~-~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
||+++.+ ...+++|++++|+|+ |++|++++|+++.. +++|+++++++++++.++++|++.+++.+. ++.+.+.+.+
T Consensus 158 a~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t 235 (345)
T 3jv7_A 158 PYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELT 235 (345)
T ss_dssp HHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHh
Confidence 9999977 458999999999998 99999999999998 779999999999999999999999998766 7888899888
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+++++|++||++|.. .+..++++++++|+++.+|...+....++. .++.+++++.|+...
T Consensus 236 ~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~ 296 (345)
T 3jv7_A 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWG 296 (345)
T ss_dssp GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSC
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecC
Confidence 877899999999987 689999999999999999987764556675 778889999988754
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=324.63 Aligned_cols=258 Identities=30% Similarity=0.435 Sum_probs=231.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|+
T Consensus 1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~ 78 (339)
T 1rjw_A 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK 78 (339)
T ss_dssp CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CeEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence 999999998854 889999999999999999999999999999999987664445789999999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||+... .+|+|+||+++|.+.++++|+++++++|+++++++.|+|+++.
T Consensus 79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~ 158 (339)
T 1rjw_A 79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK 158 (339)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999998631 3689999999999999999999999999999999999999996
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+. ++++|+++||+|+ |++|++++|+++..|++|+++++++++++.++++|++.++|.++.++.+.+.+.+ .++|++
T Consensus 159 ~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~--~~~d~v 234 (339)
T 1rjw_A 159 VT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV--GGVHAA 234 (339)
T ss_dssp HH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH--SSEEEE
T ss_pred hc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh--CCCCEE
Confidence 55 8999999999999 8899999999999999999999999999999999999999988778888887776 369999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
||++|. ..+..++++++++|+++.+|...+. ..++...++.+++++.|+...
T Consensus 235 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~ 287 (339)
T 1rjw_A 235 VVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIGSIVG 287 (339)
T ss_dssp EESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEECCSC
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEecccCCC-CccCHHHHHhCCcEEEEeccC
Confidence 999997 5688899999999999999987643 467777788899999997654
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-47 Score=326.08 Aligned_cols=257 Identities=26% Similarity=0.389 Sum_probs=231.4
Q ss_pred CEEEEEcCCC---CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~---~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||++++++| +++.+++++.|.|+|++|||+|||.+++||++|++.+.|. ....|.++|||++|+|+++|++++
T Consensus 3 MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G~V~~vG~~v~ 79 (346)
T 3fbg_A 3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIGVVESVGNEVT 79 (346)
T ss_dssp EEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred cEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEEEEEEeCCCCC
Confidence 8999999988 5678999999999999999999999999999999998886 235689999999999999999999
Q ss_pred CCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCC------CCCEEEEecC
Q 024011 78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVHGG 148 (274)
Q Consensus 78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~------~g~~vlI~Ga 148 (274)
+|++||+|++.. .+|+|+||+++|.+.++++|+++++++|++++++++|||+++.+..+++ +|++|||+|+
T Consensus 80 ~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg 159 (346)
T 3fbg_A 80 MFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIING 159 (346)
T ss_dssp SCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEEST
T ss_pred cCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcC
Confidence 999999999863 3799999999999999999999999999999999999999998888888 9999999988
Q ss_pred CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhc
Q 024011 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGS 227 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~ 227 (274)
+|++|++++|+++..|++|+++++++++++.++++|++.+++.++ ++.+.+.+. .++++|++|||+|... +..++++
T Consensus 160 ~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~-~~~g~Dvv~d~~g~~~~~~~~~~~ 237 (346)
T 3fbg_A 160 AGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQ-GIELVDYVFCTFNTDMYYDDMIQL 237 (346)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHH-TCCCEEEEEESSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHh-CCCCccEEEECCCchHHHHHHHHH
Confidence 899999999999999999999999999999999999999998864 677777776 5668999999999865 6889999
Q ss_pred cccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++++|+++.++.. ...++...+..+++++.+++.+
T Consensus 238 l~~~G~iv~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 272 (346)
T 3fbg_A 238 VKPRGHIATIVAF---ENDQDLNALKPKSLSFSHEFMF 272 (346)
T ss_dssp EEEEEEEEESSCC---SSCBCGGGGTTTTCEEEECCTT
T ss_pred hccCCEEEEECCC---CCCCccccccccceEEEEEEEe
Confidence 9999999988643 2356777788889999987654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-47 Score=325.14 Aligned_cols=261 Identities=23% Similarity=0.422 Sum_probs=233.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus 6 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 83 (347)
T 2hcy_A 6 QKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWK 83 (347)
T ss_dssp EEEEEESSTTCC--CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred cEEEEEeCCCCC--CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCc
Confidence 899999998854 889999999999999999999999999999999987664445789999999999999999999999
Q ss_pred CCCEEEEE----------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||+.. ..+|+|+||+++|.+.++++|+++++++|++++++++|+|+++.
T Consensus 84 ~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 163 (347)
T 2hcy_A 84 IGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK 163 (347)
T ss_dssp TTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHH
Confidence 99999863 12689999999999999999999999999999999999999995
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCC-CCcHHHHHHHHhCCCCccE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-TEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~d~ 211 (274)
+ .++++|+++||+|++|++|++++++++..|++|+++++++++++.++++|++.++|.. .+++.+.+.+.+.+ ++|+
T Consensus 164 ~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~-~~D~ 241 (347)
T 2hcy_A 164 S-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDG-GAHG 241 (347)
T ss_dssp T-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTS-CEEE
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCC-CCCE
Confidence 5 4899999999999999999999999999999999999999999999999999888876 56777778777766 7999
Q ss_pred EEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 212 ILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 212 vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+||++|. ..+..+++.++++|+++.+|...+....++...++.+++++.|+...
T Consensus 242 vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 296 (347)
T 2hcy_A 242 VINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVG 296 (347)
T ss_dssp EEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCC
T ss_pred EEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCC
Confidence 9999997 56888999999999999999876554567777888899999998654
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-48 Score=328.24 Aligned_cols=258 Identities=22% Similarity=0.351 Sum_probs=229.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++| +++|+
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~ 78 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH 78 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence 9999999999888899999999999999999999999999999999999877656789999999999999998 57899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh--hcCCCC--CCEEEEecCCc
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM--TSHLSP--GESFLVHGGSS 150 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~--g~~vlI~Ga~g 150 (274)
+||||++.. .+|+|+||+++|.+.++++|+++++++|+++++.++|+|.++.. ..++++ |+ |||+|++|
T Consensus 79 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~-VlV~Ga~G 157 (324)
T 3nx4_A 79 AGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGE-VVVTGASG 157 (324)
T ss_dssp TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC-EEESSTTS
T ss_pred CCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCe-EEEECCCc
Confidence 999999763 57999999999999999999999999999999999999988863 345666 45 99999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 151 ~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
++|++++|+++..|++|+++++++++++.++++|++.++|+++.+. +.+.+ +.++|++||++|+..+..+++++++
T Consensus 158 ~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~-~~~~d~v~d~~g~~~~~~~~~~l~~ 233 (324)
T 3nx4_A 158 GVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE---SRPLE-KQLWAGAIDTVGDKVLAKVLAQMNY 233 (324)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC---CCSSC-CCCEEEEEESSCHHHHHHHHHTEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH---HHhhc-CCCccEEEECCCcHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998765443 22223 3479999999999889999999999
Q ss_pred CCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 231 DGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+|+++.+|...+....++...++.+++++.|+...
T Consensus 234 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~ 268 (324)
T 3nx4_A 234 GGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSV 268 (324)
T ss_dssp EEEEEECCCTTCSEEEEESHHHHHHCCEEEECCST
T ss_pred CCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEecc
Confidence 99999999887655677778888999999998643
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=331.51 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=232.0
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCC--CCeEEEEEeeeecChhhhHhhcCCCCCCCCCC---------CCCCCceeEE
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIK--DDEVLIKVEATALNRADTLQRKGSYPPPKGAS---------PYPGLECSGT 68 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~--~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p---------~~~G~e~~G~ 68 (274)
||++++++++++ +.+++++.|.|+|+ +|||+|||.++|||++|++.+.|.++....+| .++|||++|+
T Consensus 4 mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G~ 83 (364)
T 1gu7_A 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE 83 (364)
T ss_dssp EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred EEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEEE
Confidence 899999998865 45888999888877 99999999999999999999998765433456 7899999999
Q ss_pred EEEecCCCCCCCCCCEEEEEe-cCCeeeeEEeeeCCCeEECCC-----------CCCHHhhccCcchHHHHHHHHHhhcC
Q 024011 69 ILSVGKNVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPS-----------GVSLKDAAAFPEVACTVWSTVFMTSH 136 (274)
Q Consensus 69 V~~vG~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~-----------~~~~~~aa~l~~~~~~a~~~l~~~~~ 136 (274)
|+++|++++.|++||||++.. .+|+|+||+++|.+.++++|+ ++++++|++++++++|||+++.+..+
T Consensus 84 V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~ 163 (364)
T 1gu7_A 84 VIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVK 163 (364)
T ss_dssp EEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSC
T ss_pred EEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhc
Confidence 999999999999999998874 469999999999999999998 89999999999999999999977778
Q ss_pred CCCC-CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHHcCCCEEEeCCC---CcHHHHHHHHh--CC
Q 024011 137 LSPG-ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGADVCINYKT---EDFVARVKEET--GG 206 (274)
Q Consensus 137 ~~~g-~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~g~~~~~~~~~---~~~~~~~~~~~--~~ 206 (274)
+++| ++|||+|++|++|++++|+|+..|+++++++++.++ .+.++++|++.++++++ .++.+.+.+.+ ++
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence 9999 999999999999999999999999999998876654 57778999999998764 67778888777 55
Q ss_pred CCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 207 ~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.++|++||++|+.....++++++++|+++.+|...+....++...++.+++++.|++.
T Consensus 244 ~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 301 (364)
T 1gu7_A 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWV 301 (364)
T ss_dssp CCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCH
T ss_pred CCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEch
Confidence 6899999999987766889999999999999976654556777778889999999864
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-47 Score=326.93 Aligned_cols=257 Identities=25% Similarity=0.372 Sum_probs=228.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||+++++++++ +++++.|.|+ |++|||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus 16 mka~~~~~~g~~--l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~ 93 (359)
T 1h2b_A 16 LKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE 93 (359)
T ss_dssp -CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred ceEEEEecCCCC--cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCC
Confidence 899999998753 8899999999 99999999999999999999999987641 235688999999999999999999
Q ss_pred CCCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhc---cCcchHHHH
Q 024011 78 RWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAA---AFPEVACTV 127 (274)
Q Consensus 78 ~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa---~l~~~~~~a 127 (274)
+|++||||++.. .+|+|+||+++|.+.++++|+++++++|+ ++.+++.|+
T Consensus 94 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta 173 (359)
T 1h2b_A 94 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITA 173 (359)
T ss_dssp SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHH
T ss_pred CCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHH
Confidence 999999998753 36999999999999999999999999998 788899999
Q ss_pred HHHHHhh-cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 128 WSTVFMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 128 ~~~l~~~-~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
|+++.+. .++++|++|||+|+ |++|++++|+++.. |++|+++++++++++.++++|+++++|+++. +.+.+.+.++
T Consensus 174 ~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~~~~ 251 (359)
T 1h2b_A 174 YRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVMELTR 251 (359)
T ss_dssp HHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHHHTT
T ss_pred HHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHHHhC
Confidence 9999765 89999999999999 89999999999999 9999999999999999999999999998877 7788888877
Q ss_pred CCCccEEEECCChh---hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 206 GKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 206 ~~~~d~vi~~~g~~---~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++++|++||++|.. .+..++++ ++|+++.+|..... .++...++.+++++.|+...
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~~~~~~~~~~~~~i~g~~~~ 310 (359)
T 1h2b_A 252 GRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--RFPTIRVISSEVSFEGSLVG 310 (359)
T ss_dssp TCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--CCCHHHHHHTTCEEEECCSC
T ss_pred CCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--CCCHHHHHhCCcEEEEecCC
Confidence 66899999999987 67777877 89999999986543 67777788899999998654
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-47 Score=327.22 Aligned_cols=258 Identities=28% Similarity=0.397 Sum_probs=232.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++++.|+
T Consensus 7 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v~~~~ 82 (371)
T 1f8f_A 7 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIEAIGPNVTELQ 82 (371)
T ss_dssp EEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred ceEEEEcCCCCC--eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcccceEEEEeCCCCCCCC
Confidence 899999988754 88999999999999999999999999999999998765 34689999999999999999999999
Q ss_pred CCCEEEEEe-------------------------------------------------cCCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||||++.. .+|+|+||+++|.+.++++|++
T Consensus 83 ~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 162 (371)
T 1f8f_A 83 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD 162 (371)
T ss_dssp TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred CCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCC
Confidence 999998621 2489999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++|+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++
T Consensus 163 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 163 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN 241 (371)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEec
Confidence 9999999999999999999977889999999999996 9999999999999999 6999999999999999999999999
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.++.++.+.+.+.+++ ++|+|||++|. ..+..++++++++|+++.+|.... ....++...++.+++++.|++.
T Consensus 242 ~~~~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 316 (371)
T 1f8f_A 242 SKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE 316 (371)
T ss_dssp TTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG
T ss_pred CCccCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCC
Confidence 9888888888888776 89999999997 458899999999999999998653 3346777778889999999864
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=327.06 Aligned_cols=258 Identities=22% Similarity=0.301 Sum_probs=230.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 9 mkA~v~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~ 85 (378)
T 3uko_A 9 CKAAVAYEPNKP--LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 85 (378)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred eEEEEEecCCCc--cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC-CCCCccCCccceEEEEEeCCCCCcCC
Confidence 899999998875 899999999999999999999999999999999988653 35789999999999999999999999
Q ss_pred CCCEEEEEec-------------------------------------------------CCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||||++... +|+|+||+++|.+.++++|++
T Consensus 86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 165 (378)
T 3uko_A 86 AGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPT 165 (378)
T ss_dssp TTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred CCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCC
Confidence 9999986532 158999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++|+.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++
T Consensus 166 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~ 244 (378)
T 3uko_A 166 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVN 244 (378)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEEC
T ss_pred CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999999888889999999999998 9999999999999999 8999999999999999999999998
Q ss_pred CC--CCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 191 YK--TEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.. ..++.+.+.+.+++ ++|++||++|.. .+..++++++++ |+++.+|.... ....++...++. ++++.|++.
T Consensus 245 ~~~~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 321 (378)
T 3uko_A 245 PKDHDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 321 (378)
T ss_dssp GGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEECSG
T ss_pred cccCchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEEEEe
Confidence 87 67888889888877 899999999984 588999999996 99999997653 334555555554 889988764
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-47 Score=325.92 Aligned_cols=258 Identities=23% Similarity=0.330 Sum_probs=230.7
Q ss_pred CEEEEEcCC---CCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~---~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||++++++ +++..+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 23 MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~ 101 (363)
T 4dvj_A 23 MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAGIVSAVGPDVT 101 (363)
T ss_dssp EEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEEEEEEECTTCC
T ss_pred eEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEEEEEEeCCCCC
Confidence 899999988 56678999999999999999999999999999999999987654 35789999999999999999999
Q ss_pred CCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCC-----CCCEEEEecCC
Q 024011 78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS-----PGESFLVHGGS 149 (274)
Q Consensus 78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~-----~g~~vlI~Ga~ 149 (274)
+|++||||++.. .+|+|+||+++|.+.++++|+++++++||+++++++|||+++.+..+++ +|++|||+|++
T Consensus 102 ~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~ 181 (363)
T 4dvj_A 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGA 181 (363)
T ss_dssp SCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTT
T ss_pred CCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCC
Confidence 999999998763 3699999999999999999999999999999999999999998888888 89999999988
Q ss_pred chHHHHHHHHHHH-cCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhc
Q 024011 150 SGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGS 227 (274)
Q Consensus 150 g~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~ 227 (274)
|++|++++|+|+. .|++|+++++++++++.++++|++.+++.++ ++.+.+.+. .++++|+||||+|+. .+..++++
T Consensus 182 G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~-~~~g~Dvvid~~g~~~~~~~~~~~ 259 (363)
T 4dvj_A 182 GGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAAL-GLGAPAFVFSTTHTDKHAAEIADL 259 (363)
T ss_dssp SHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTT-CSCCEEEEEECSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHh-cCCCceEEEECCCchhhHHHHHHH
Confidence 9999999999998 5899999999999999999999999998764 677777766 556899999999986 57899999
Q ss_pred cccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++++|+++.++.. ..++...++.+++++.+++.+
T Consensus 260 l~~~G~iv~~g~~----~~~~~~~~~~k~~~i~~~~~~ 293 (363)
T 4dvj_A 260 IAPQGRFCLIDDP----SAFDIMLFKRKAVSIHHELMF 293 (363)
T ss_dssp SCTTCEEEECSCC----SSCCGGGGTTTTCEEEECCTT
T ss_pred hcCCCEEEEECCC----CccchHHHhhccceEEEEEee
Confidence 9999999999642 356777788899999987654
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=327.47 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=232.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++ .+++++.|.|+|++|||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|+++++|+
T Consensus 24 mkA~v~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 98 (370)
T 4ej6_A 24 MKAVRLESVG---NISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP--STPPVTLGHEFCGIVVEAGSAVRDIA 98 (370)
T ss_dssp EEEEEEEETT---EEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSEECCCSEEEEEEEECTTCCSSC
T ss_pred eEEEEEecCC---ceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC--CCCCeecCcceEEEEEEECCCCCCCC
Confidence 8999999875 399999999999999999999999999999999998764 35688999999999999999999999
Q ss_pred CCCEEEEE---------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||||++. ..+|+|+||+++|.+.++++|+++++++|+ +..++.++|+++ +
T Consensus 99 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~ 176 (370)
T 4ej6_A 99 PGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-D 176 (370)
T ss_dssp TTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-H
T ss_pred CCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-H
Confidence 99999873 236999999999999999999999999998 778999999998 7
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHH---HhCCCCc
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE---ETGGKGV 209 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~ 209 (274)
..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.++|++..++.+.+.+ .+++ ++
T Consensus 177 ~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~g-g~ 254 (370)
T 4ej6_A 177 LSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPG-GV 254 (370)
T ss_dssp HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTT-CE
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCC-CC
Confidence 789999999999998 9999999999999999 8999999999999999999999999988898888887 5655 89
Q ss_pred cEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeecc
Q 024011 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 210 d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
|+|||++|. ..+..++++++++|+++.+|.... ....++...++.+++++.|++..
T Consensus 255 Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 312 (370)
T 4ej6_A 255 DVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFIN 312 (370)
T ss_dssp EEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSC
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccC
Confidence 999999995 568899999999999999998664 24578888899999999998764
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=323.53 Aligned_cols=256 Identities=27% Similarity=0.370 Sum_probs=227.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|+++++|+
T Consensus 10 mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v~~~~ 85 (373)
T 1p0f_A 10 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVESIGAGVTCVK 85 (373)
T ss_dssp EEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred eEEEEEEcCCCC--eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEEEECCCCCccC
Confidence 899999988754 88999999999999999999999999999999998765 35689999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||++.. .+|+|+||+++|++.++++|+++
T Consensus 86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 165 (373)
T 1p0f_A 86 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA 165 (373)
T ss_dssp TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTC
T ss_pred CCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCC
Confidence 999998752 13899999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+++ |+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|+++++|+
T Consensus 166 ~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~ 243 (373)
T 1p0f_A 166 PLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNP 243 (373)
T ss_dssp CGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred Chh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEec
Confidence 999 99999999999999878889999999999996 9999999999999999 89999999999999999999999987
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++ +++.+.+.+.+++ ++|+|||++|. ..+..++++++++ |+++.+|.... ....++...++.++ ++.|++.
T Consensus 244 ~~~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 319 (373)
T 1p0f_A 244 KDYDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVF 319 (373)
T ss_dssp GGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred ccccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeecc
Confidence 64 5688888887775 89999999997 5688999999999 99999997653 23456666677777 8988764
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=320.75 Aligned_cols=260 Identities=28% Similarity=0.418 Sum_probs=233.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++...+ +..+++++.|.|+|+||||||||.++|||++|++.++|.++. .+|.++|||++|+|+++|++++.|+
T Consensus 1 MKA~v~~~~~-~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~--~~p~i~GhE~aG~V~~vG~~V~~~~ 77 (348)
T 4eez_A 1 MKAAVVRHNP-DGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN--KAGTVLGHEGIGIVKEIGADVSSLQ 77 (348)
T ss_dssp CEEEEECSSC-CSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC--CTTCBCCSEEEEEEEEECTTCCSCC
T ss_pred CeEEEEEcCC-CCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC--CCCcccceeEEEEEEEECceeeecc
Confidence 9999997543 345999999999999999999999999999999999998764 4689999999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||+... .+|+|+||+.+|.+.++++|+++++++|++++++++|+|+++
T Consensus 78 ~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l- 156 (348)
T 4eez_A 78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI- 156 (348)
T ss_dssp TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-
T ss_pred cCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-
Confidence 999997632 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
+..++++|+++||+|+ |++|.+++++++.. |++|+++++++++++.++++|++.++|+.+.++.+++.+.+++.++|.
T Consensus 157 ~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~ 235 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQS 235 (348)
T ss_dssp HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceE
Confidence 5678899999999997 88888888888865 779999999999999999999999999999999999999999999999
Q ss_pred EEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 212 ILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 212 vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
+++++++. .+..++++++++|+++.+|.... ...++...++.+++++.|++...
T Consensus 236 ~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~gs~~~~ 290 (348)
T 4eez_A 236 AIVCAVARIAFEQAVASLKPMGKMVAVAVPNT-EMTLSVPTVVFDGVEVAGSLVGT 290 (348)
T ss_dssp EEECCSCHHHHHHHHHTEEEEEEEEECCCCSC-EEEECHHHHHHSCCEEEECCSCC
T ss_pred EEEeccCcchhheeheeecCCceEEEEeccCC-CCccCHHHHHhCCeEEEEEecCC
Confidence 99998875 47889999999999999997654 45788888999999999987653
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-46 Score=324.04 Aligned_cols=256 Identities=25% Similarity=0.365 Sum_probs=227.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++++ +++++.|.|+|++|||+|||.+++||++|++.+.|. + ...+|.++|||++|+|+++|++++.|+
T Consensus 9 mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~-~~~~P~v~GhE~~G~V~~vG~~v~~~~ 84 (376)
T 1e3i_A 9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K-KALFPVVLGHECAGIVESVGPGVTNFK 84 (376)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S-CCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred eeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C-CCCCCcccCccccEEEEEECCCCccCC
Confidence 899999988754 888999999999999999999999999999998886 3 235689999999999999999999999
Q ss_pred CCCEEEEEe----------------------------------------------------cCCeeeeEEeeeCCCeEEC
Q 024011 81 VGDQVCALL----------------------------------------------------GGGGYAEKVAVPAGQVLPV 108 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------------------------------~~g~~~~~~~~~~~~~~~~ 108 (274)
+||||++.. .+|+|+||+++|++.++++
T Consensus 85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 164 (376)
T 1e3i_A 85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV 164 (376)
T ss_dssp TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred CCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEEC
Confidence 999998742 1389999999999999999
Q ss_pred CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCE
Q 024011 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV 187 (274)
Q Consensus 109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (274)
|+++++++|+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.
T Consensus 165 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~ 243 (376)
T 1e3i_A 165 DDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD 243 (376)
T ss_dssp CTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred CCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcE
Confidence 9999999999999999999999878889999999999996 9999999999999999 8999999999999999999999
Q ss_pred EEeCCC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 188 CINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 188 ~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++|.++ +++.+.+.+.+++ ++|+|||++|. ..+..++++++++ |+++.+|.. .....++...++.++ ++.|++
T Consensus 244 vi~~~~~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~-~~~~~~~~~~~~~~~-~i~g~~ 320 (376)
T 1e3i_A 244 CLNPRELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK-VDEMTIPTVDVILGR-SINGTF 320 (376)
T ss_dssp EECGGGCSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS-SSEEEEEHHHHHTTC-EEEECS
T ss_pred EEccccccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCC-CCccccCHHHhhccC-eEEEEe
Confidence 998764 5688888887775 89999999997 5688999999999 999999984 334567777777788 998876
Q ss_pred c
Q 024011 264 P 264 (274)
Q Consensus 264 ~ 264 (274)
.
T Consensus 321 ~ 321 (376)
T 1e3i_A 321 F 321 (376)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=323.58 Aligned_cols=257 Identities=24% Similarity=0.322 Sum_probs=228.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhH-hhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTL-QRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++ .+.|.++ ..+|.++|||++|+|+++|+++++|
T Consensus 9 mka~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~V~~~ 84 (374)
T 1cdo_A 9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIVESVGPGVTEF 84 (374)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEEEEECTTCCSC
T ss_pred eEEEEEecCCCC--eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEEEEECCCCccC
Confidence 899999988754 8889999999999999999999999999999 8888765 3568899999999999999999999
Q ss_pred CCCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCC
Q 024011 80 KVGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 80 ~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
++||||++.. .+|+|+||+++|++.++++|++
T Consensus 85 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~ 164 (374)
T 1cdo_A 85 QPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPS 164 (374)
T ss_dssp CTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTT
T ss_pred CCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCC
Confidence 9999998752 1389999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++|+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++|
T Consensus 165 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~ 243 (374)
T 1cdo_A 165 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN 243 (374)
T ss_dssp CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEEC
T ss_pred CCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEe
Confidence 9999999999999999999878889999999999996 9999999999999999 8999999999999999999999998
Q ss_pred CCC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 191 YKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.++ +++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|........++...++.++ ++.|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~ 319 (374)
T 1cdo_A 244 PNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMF 319 (374)
T ss_dssp GGGCSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSG
T ss_pred ccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEec
Confidence 764 5678888887765 89999999997 4688999999999 9999999865434456777777777 8988764
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=324.04 Aligned_cols=258 Identities=31% Similarity=0.432 Sum_probs=229.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcC-CCC-CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYP-PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||++++++++ .+++++.|.|+|++|||+|||.++|||++|++.+.| .++ ....+|.++|||++|+|+++|+++++
T Consensus 5 mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 82 (348)
T 2d8a_A 5 MVAIMKTKPGY--GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG 82 (348)
T ss_dssp EEEEEECSSSS--SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred ceEEEEECCCC--CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence 89999999874 489999999999999999999999999999999988 433 11346889999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
|++||||++.. .+|+|+||+++|.+.++++|+++++++|+++ +++.++|+++
T Consensus 83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l 161 (348)
T 2d8a_A 83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-EPLGNAVDTV 161 (348)
T ss_dssp CCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-HHHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence 99999998752 3599999999999999999999999999866 5888999999
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+..++ +|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.+..++.+.+.+.+++.++|
T Consensus 162 -~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 162 -LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp -TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred -HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 67788 9999999999 9999999999999999 999999999999999999999999988888888888888777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
++||++|. ..+..+++.++++|+++.+|.... ...++. ..++.+++++.|+...
T Consensus 239 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 294 (348)
T 2d8a_A 239 VFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG-KVTIDFNNLIIFKALTIYGITGR 294 (348)
T ss_dssp EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CCCCCHHHHTTTTTCEEEECCCC
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CcccCchHHHHhCCcEEEEecCC
Confidence 99999997 567889999999999999998654 346777 7788899999997643
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-46 Score=322.61 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=228.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|+++++|+
T Consensus 9 mkA~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~~vG~~v~~~~ 84 (374)
T 2jhf_A 9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGVTTVR 84 (374)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECTTCCSCC
T ss_pred EEEEEEecCCCc--eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCceEEEEEECCCCCCCC
Confidence 899999988754 889999999999999999999999999999999987653 2689999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||++.. .+|+|+||+++|.+.++++|+++
T Consensus 85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 164 (374)
T 2jhf_A 85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAS 164 (374)
T ss_dssp TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTC
T ss_pred CCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCC
Confidence 999998752 13899999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.++|.
T Consensus 165 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~ 243 (374)
T 2jhf_A 165 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243 (374)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred CHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecc
Confidence 999999999999999999878889999999999996 9999999999999999 89999999999999999999999987
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++ +++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... ....++...++.++ ++.|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 319 (374)
T 2jhf_A 244 QDYKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF 319 (374)
T ss_dssp GGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred cccchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc
Confidence 64 5677888877765 89999999997 5678999999999 99999997653 23466667777778 9988764
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-47 Score=326.34 Aligned_cols=263 Identities=24% Similarity=0.356 Sum_probs=225.8
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++++++++ +.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|
T Consensus 27 mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~ 106 (357)
T 1zsy_A 27 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGL 106 (357)
T ss_dssp EEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCSC
T ss_pred hEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCCC
Confidence 899999998875 3488999999999999999999999999999999999776444568899999999999999999999
Q ss_pred CCCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHH
Q 024011 80 KVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (274)
Q Consensus 80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~ 158 (274)
++||||++.. .+|+|+||+++|.+.++++|+++++++|++++++++|||+++.+..++++|++|||+|++|++|++++|
T Consensus 107 ~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiq 186 (357)
T 1zsy_A 107 KPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ 186 (357)
T ss_dssp CTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHH
T ss_pred CCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHH
Confidence 9999999875 369999999999999999999999999999998999999999888899999999999999999999999
Q ss_pred HHHHcCCeEEEEecChh----hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCC-CccEEEECCChhhHHHhhhccccCCE
Q 024011 159 MGKCQGVRVFVTAGSEE----KLAVCKDLGADVCINYKTEDFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGR 233 (274)
Q Consensus 159 ~~~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~l~~~g~ 233 (274)
+|+..|+++++++++.+ +++.++++|++.+++.++. ..+.+.+.+.+. ++|++||++|+.....++++++++|+
T Consensus 187 lak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~ 265 (357)
T 1zsy_A 187 IAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL-RRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGT 265 (357)
T ss_dssp HHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH-HSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCE
T ss_pred HHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcc-hHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCE
Confidence 99999999888875532 4677889999999875421 112233444332 59999999998777788999999999
Q ss_pred EEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 234 LFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 234 ~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.+|........++...++.+++++.|+..
T Consensus 266 iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 296 (357)
T 1zsy_A 266 MVTYGGMAKQPVVASVSLLIFKDLKLRGFWL 296 (357)
T ss_dssp EEECCCCTTCCBCCCHHHHHHSCCEEEECCH
T ss_pred EEEEecCCCCCCCCCHHHHHhcCceEEEEEc
Confidence 9999866554556777778889999999864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=319.35 Aligned_cols=260 Identities=28% Similarity=0.407 Sum_probs=231.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-------CCCCCCCCCCceeEEEEEec
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------PKGASPYPGLECSGTILSVG 73 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~vG 73 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|
T Consensus 1 Mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 78 (347)
T 1jvb_A 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78 (347)
T ss_dssp CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred CeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence 999999998754 889999999999999999999999999999998886542 23568899999999999999
Q ss_pred CCCCCCCCCCEEEEEe---------------------------cCCeeeeEEeeeC-CCeEECCCCCCHHhhccCcchHH
Q 024011 74 KNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 74 ~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~-~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+++++|++||||++.. .+|+|+||+++|. +.++++ +++++++|+++++++.
T Consensus 79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ 157 (347)
T 1jvb_A 79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGI 157 (347)
T ss_dssp TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHH
T ss_pred CCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHH
Confidence 9999999999997642 3689999999999 999999 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
|+|+++. ..++++|+++||+|++|++|++++|+++.. |++|+++++++++++.++++|++.+++..+.++.+.+.+.+
T Consensus 158 ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 158 TTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 236 (347)
T ss_dssp HHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh
Confidence 9999995 488999999999999889999999999999 99999999999999999999999999988888877777776
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
...++|++||++|.. .+..+++.++++|+++.+|...... .++...++.+++++.|+...
T Consensus 237 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~ 297 (347)
T 1jvb_A 237 ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVG 297 (347)
T ss_dssp TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSC
T ss_pred cCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEecc
Confidence 523799999999986 6889999999999999999865223 67777788899999998654
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=322.17 Aligned_cols=258 Identities=28% Similarity=0.370 Sum_probs=228.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus 7 mkA~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~ 83 (373)
T 2fzw_A 7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGVTKLK 83 (373)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred eEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEEEECCCCCCCC
Confidence 899999988754 889999999999999999999999999999999987653 34689999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||++.. .+|+|+||+++|.+.++++|+++
T Consensus 84 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 163 (373)
T 2fzw_A 84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLA 163 (373)
T ss_dssp TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCC
Confidence 999998752 14899999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++|+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+++.
T Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~ 242 (373)
T 2fzw_A 164 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242 (373)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred CHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 999999999999999999878889999999999996 9999999999999999 89999999999999999999999987
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++ .++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... ....++...++.++ ++.|+..
T Consensus 243 ~~~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 318 (373)
T 2fzw_A 243 QDFSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAF 318 (373)
T ss_dssp GGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred ccccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEecc
Confidence 64 5688888887765 89999999997 4678999999999 99999997653 23456666777777 8988764
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=322.25 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=228.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhH-hhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTL-QRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||++++++++ +++++.|.|+|++|||+|||.+++||++|++ .+.|.++. .+|.++|||++|+|+++|+++++|
T Consensus 1 MkA~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~--~~p~v~G~E~~G~V~~vG~~v~~~ 75 (352)
T 3fpc_A 1 MKGFAMLSIGK---VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE--RHNMILGHEAVGEVVEVGSEVKDF 75 (352)
T ss_dssp CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC--CSSEECCCEEEEEEEEECTTCCSC
T ss_pred CeEEEEccCCC---ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC--CCCcccCCcceEEEEEECCCCCcC
Confidence 99999998876 8899999999999999999999999999999 56776653 468999999999999999999999
Q ss_pred CCCCEEEEEe------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHH
Q 024011 80 KVGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV 127 (274)
Q Consensus 80 ~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a 127 (274)
++||||+... .+|+|+||+++|.. .++++|+++++++|+++++++.|+
T Consensus 76 ~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta 155 (352)
T 3fpc_A 76 KPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTG 155 (352)
T ss_dssp CTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHH
T ss_pred CCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHH
Confidence 9999998631 46999999999976 899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
|+++ +..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++++++.++.+.+.+.+++
T Consensus 156 ~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g 233 (352)
T 3fpc_A 156 FHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG 233 (352)
T ss_dssp HHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTT
T ss_pred HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCC
Confidence 9998 7789999999999996 9999999999999999 89999999999999999999999999888999999999988
Q ss_pred CCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCC-ccccchhh--HhhcceEEEEeec
Q 024011 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQGIVP 264 (274)
Q Consensus 207 ~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~g~~~ 264 (274)
+++|++||++|. ..+..++++++++|+++.+|..... ...++... +..+++++.|++.
T Consensus 234 ~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 295 (352)
T 3fpc_A 234 KGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC 295 (352)
T ss_dssp CCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred CCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence 899999999998 5689999999999999999976532 22233222 3357888888765
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=323.12 Aligned_cols=258 Identities=22% Similarity=0.326 Sum_probs=228.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC---
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS--- 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~--- 77 (274)
|||++++++++ .+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++| +++
T Consensus 18 mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~P~v~GhE~~G~V~~vG-~V~~~~ 93 (380)
T 1vj0_A 18 AHAMVLEKFNQ--PLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAGRVVEVN-GEKRDL 93 (380)
T ss_dssp EEEEEBCSTTS--CCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred eEEEEEecCCC--CeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCC-CCCCcccCcCcEEEEEEeC-Cccccc
Confidence 89999999882 4899999999999999999999999999999999987652 3468899999999999999 998
Q ss_pred ---CCCCCCEEEEE------------------------------------ecCCeeeeEEee-eCCCeEECCCCCCHH-h
Q 024011 78 ---RWKVGDQVCAL------------------------------------LGGGGYAEKVAV-PAGQVLPVPSGVSLK-D 116 (274)
Q Consensus 78 ---~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~-~~~~~~~~p~~~~~~-~ 116 (274)
.|++||||++. ..+|+|+||+++ |.+.++++|++++++ +
T Consensus 94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~ 173 (380)
T 1vj0_A 94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVL 173 (380)
T ss_dssp TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHH
T ss_pred cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHh
Confidence 99999999874 126999999999 999999999999999 6
Q ss_pred hccCcchHHHHHHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCC--
Q 024011 117 AAAFPEVACTVWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYK-- 192 (274)
Q Consensus 117 aa~l~~~~~~a~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~-- 192 (274)
|+.+ ++++|+|+++ +..+ +++|++|||+| +|++|++++|+|+..| ++|+++++++++++.++++|++.+++.+
T Consensus 174 Aa~~-~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~ 250 (380)
T 1vj0_A 174 AMAM-CSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRET 250 (380)
T ss_dssp HHHT-THHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTS
T ss_pred Hhhh-cHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEecccc
Confidence 6655 5999999999 5678 99999999999 6999999999999999 5999999999999999999999999887
Q ss_pred -CCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCC-CCccccchhh-HhhcceEEEEeecc
Q 024011 193 -TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITS-LFAKRLTVQGIVPL 265 (274)
Q Consensus 193 -~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~-~~~~~~~i~g~~~~ 265 (274)
..++.+.+.+.+++.++|+|||++|. ..+..++++++++|+++.+|... +....++... ++.+++++.|++..
T Consensus 251 ~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 327 (380)
T 1vj0_A 251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS 327 (380)
T ss_dssp CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred CcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecC
Confidence 66777888888877789999999997 46889999999999999999876 4245677777 88899999998754
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=315.78 Aligned_cols=258 Identities=24% Similarity=0.271 Sum_probs=224.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||++++++|. ++++|.|.|+ ++||||||||.++|||++|++.+.|..+. .+|.++|||++|+|+++|++++.+
T Consensus 1 MkAvv~~~~g~---l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~--~~P~i~G~E~~G~V~~vG~~V~~~ 75 (346)
T 4a2c_A 1 MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH--YYPITLGHEFSGYIDAVGSGVDDL 75 (346)
T ss_dssp CEEEEECSSSC---EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS--SSSBCCCCEEEEEEEEECTTCCSC
T ss_pred CCEEEEecCCC---EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC--CCCccccEEEEEEEEEECCCcccc
Confidence 99999998875 9999999998 57999999999999999999999887553 468999999999999999999999
Q ss_pred CCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
++||+|+... .+|+|+||+++|.+.++++|+++++++||++ .++.+++++ .
T Consensus 76 ~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l-~~~~~~~~~-~ 153 (346)
T 4a2c_A 76 HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFI-EPITVGLHA-F 153 (346)
T ss_dssp CTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGH-HHHHHHHHH-H
T ss_pred cCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhc-hHHHHHHHH-H
Confidence 9999998632 3589999999999999999999999999865 344455544 4
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
...++++|++|+|+|+ |++|.+++|+++..|++ ++++++++++++.++++|+++++|+++.+..+.....+++.++|+
T Consensus 154 ~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccc
Confidence 7788999999999997 99999999999999995 567788999999999999999999999988888888888888999
Q ss_pred EEECCChh-hHHHhhhccccCCEEEEEecCCCCc--cccchhhHhhcceEEEEeeccc
Q 024011 212 ILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 212 vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
++|++|.. .++.++++++++|+++.+|...... ...++..++.+++++.|++...
T Consensus 233 v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~ 290 (346)
T 4a2c_A 233 ILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNY 290 (346)
T ss_dssp EEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTC
T ss_pred ccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccc
Confidence 99999965 5788999999999999999876542 2345566788999999987543
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=322.20 Aligned_cols=257 Identities=28% Similarity=0.384 Sum_probs=229.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|+++++
T Consensus 1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 78 (343)
T 2dq4_A 1 MRALAKLAPEEG--LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR 78 (343)
T ss_dssp CEEEEECSSSSS--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CeEEEEeCCCCc--EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence 999999998865 889999999999999999999999999999999886541 1346889999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
|++||||++.. .+|+|+||+++|.+.++++|+++++++|+++ .++.++|+++
T Consensus 79 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l 157 (343)
T 2dq4_A 79 PQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTV 157 (343)
T ss_dssp SCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence 99999998742 4699999999999999999999999999866 6788999999
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.+..++ +|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++ ++.+++.+++++.+.+.+.+ +.++|
T Consensus 158 ~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~-~~g~D 233 (343)
T 2dq4_A 158 YAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVE 233 (343)
T ss_dssp HSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH-SSCEE
T ss_pred HHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc-CCCCC
Confidence 657788 9999999999 9999999999999999 999999999999999899 99999988888888888877 66899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
++||++|. ..+..++++++++|+++.+|.... ...++. ..++.+++++.|+...
T Consensus 234 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 289 (343)
T 2dq4_A 234 VLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-PIRFDLAGELVMRGITAFGIAGR 289 (343)
T ss_dssp EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CEEECHHHHTGGGTCEEEECCSC
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CceeCcHHHHHhCceEEEEeecC
Confidence 99999998 568899999999999999998643 356777 7788899999998653
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=317.69 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=226.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcC-CCCC-CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYPP-PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g-~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||+++++++ .+++++.|.|+|++|||+|||.++|||++|++.+.+ .++. ...+|.++|||++|+|+++|+++++
T Consensus 5 mka~~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 81 (352)
T 1e3j_A 5 NLSAVLYKQN---DLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH 81 (352)
T ss_dssp CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred CEEEEEEcCC---cEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence 8999999865 499999999999999999999999999999998874 3321 2246889999999999999999999
Q ss_pred CCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|++||||++.. .+|+|+||+++|.+.++++|+++++++|+.+ .++.++|++
T Consensus 82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~a 160 (352)
T 1e3j_A 82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHA 160 (352)
T ss_dssp CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHH
T ss_pred CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHH
Confidence 99999998742 3699999999999999999999999999854 688899999
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhC---C
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETG---G 206 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~---~ 206 (274)
+ +..++++|++|||+|+ |++|++++|+++..|++|+++++++++++.++++|++.+++.++ .++.+++.+.++ +
T Consensus 161 l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 161 C-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp H-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccC
Confidence 9 6788999999999997 99999999999999999999999999999999999999998875 677778877765 5
Q ss_pred CCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 207 KGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 207 ~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|++||++|.. .+..++++++++|+++.+|.... ...++...++.+++++.|++.+
T Consensus 239 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~ 297 (352)
T 1e3j_A 239 DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIKSVFRY 297 (352)
T ss_dssp SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS-CCCCCHHHHHTTTCEEEECCSC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CccccHHHHHhcCcEEEEeccc
Confidence 6799999999976 57889999999999999987543 3467777888999999998754
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=316.92 Aligned_cols=252 Identities=30% Similarity=0.468 Sum_probs=220.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC--C--CCCCCCCCCCCceeEEEEEecCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--P--PPKGASPYPGLECSGTILSVGKNV 76 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~--~--~~~~~p~~~G~e~~G~V~~vG~~~ 76 (274)
|||++++++++++.+++++.|.|+|++|||+|||.++|||++|++.+.|.. + ....+|.++|||++|+|+++|+++
T Consensus 7 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v 86 (321)
T 3tqh_A 7 MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDV 86 (321)
T ss_dssp EEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTC
T ss_pred ceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCC
Confidence 899999999988889999999999999999999999999999999998831 1 123568899999999999999999
Q ss_pred CCCCCCCEEEEEe----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchH
Q 024011 77 SRWKVGDQVCALL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152 (274)
Q Consensus 77 ~~~~~Gd~V~~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~i 152 (274)
++|++||||+++. .+|+|+||+++|.+.++++|+++++++|++++++++|+|+++ +..++++|++|||+|++|++
T Consensus 87 ~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~v 165 (321)
T 3tqh_A 87 NNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGV 165 (321)
T ss_dssp CSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHH
T ss_pred CCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHH
Confidence 9999999999885 369999999999999999999999999999999999999999 78899999999999988999
Q ss_pred HHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCc-HHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 153 G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
|++++|+|+..|++|++++ ++++++.++++|++.++|++..+ +.+.+ +++|++||++|+.....++++++++
T Consensus 166 G~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~------~g~D~v~d~~g~~~~~~~~~~l~~~ 238 (321)
T 3tqh_A 166 GHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAIS------TPVDAVIDLVGGDVGIQSIDCLKET 238 (321)
T ss_dssp HHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCC------SCEEEEEESSCHHHHHHHGGGEEEE
T ss_pred HHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhc------cCCCEEEECCCcHHHHHHHHhccCC
Confidence 9999999999999999987 55668899999999999988777 44332 4699999999998889999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|..... .....+..+++++.+++
T Consensus 239 G~iv~~g~~~~~---~~~~~~~~~~~~~~~~~ 267 (321)
T 3tqh_A 239 GCIVSVPTITAG---RVIEVAKQKHRRAFGLL 267 (321)
T ss_dssp EEEEECCSTTHH---HHHHHHHHTTCEEECCC
T ss_pred CEEEEeCCCCch---hhhhhhhhcceEEEEEe
Confidence 999999764322 12234567788888754
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=318.31 Aligned_cols=257 Identities=22% Similarity=0.343 Sum_probs=225.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC-CC-CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PP-PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||+++++++ .+++++.|.|+|++|||+|||.++|||++|++.+.+.. .. ...+|.++|||++|+|+++|+++++
T Consensus 8 mka~~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~ 84 (356)
T 1pl8_A 8 NLSLVVHGPG---DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (356)
T ss_dssp CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred ceEEEEecCC---cEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence 8999999865 49999999999999999999999999999999887432 11 1246889999999999999999999
Q ss_pred CCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|++||||++.. .+|+|+||+++|.+.++++|+++++++|+.+ .++.++|++
T Consensus 85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~a 163 (356)
T 1pl8_A 85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHA 163 (356)
T ss_dssp CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHH
T ss_pred CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHH
Confidence 99999998741 3699999999999999999999999999854 688899999
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCC---CCcHHHHHHHHhCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK---TEDFVARVKEETGG 206 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~ 206 (274)
+ +..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.+ ..++.+.+.+.++
T Consensus 164 l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~- 240 (356)
T 1pl8_A 164 C-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG- 240 (356)
T ss_dssp H-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHT-
T ss_pred H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhC-
Confidence 9 6788999999999996 9999999999999999 999999999999999999999999877 3567777877776
Q ss_pred CCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 207 KGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 207 ~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|+|||++|.. .+..++++++++|+++.+|... ....++...++.+++++.|+..+
T Consensus 241 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~ 299 (356)
T 1pl8_A 241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS-EMTTVPLLHAAIREVDIKGVFRY 299 (356)
T ss_dssp SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC-SCCCCCHHHHHHTTCEEEECCSC
T ss_pred CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCC-CCCccCHHHHHhcceEEEEeccc
Confidence 6899999999975 5788999999999999999744 33567778888999999998754
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-46 Score=324.07 Aligned_cols=263 Identities=25% Similarity=0.399 Sum_probs=234.0
Q ss_pred CEEEEEcCCCCCc-------------------------ceEEEeecCCC-CCCCeEEEEEeeeecChhhhHhhcCCC---
Q 024011 1 MKAIVITQPGSPE-------------------------VLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSY--- 51 (274)
Q Consensus 1 m~a~~~~~~~~~~-------------------------~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~D~~~~~g~~--- 51 (274)
|||+++++++++. .+++++.|.|+ |++|||+|||.++|||++|++.+.|..
T Consensus 3 m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~ 82 (404)
T 3ip1_A 3 LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGY 82 (404)
T ss_dssp EEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSB
T ss_pred ceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcc
Confidence 8999999887776 78999999999 999999999999999999999988642
Q ss_pred ---CCCCCCCCCCCCceeEEEEEecCCC------CCCCCCCEEEEE---------------------------ecCCeee
Q 024011 52 ---PPPKGASPYPGLECSGTILSVGKNV------SRWKVGDQVCAL---------------------------LGGGGYA 95 (274)
Q Consensus 52 ---~~~~~~p~~~G~e~~G~V~~vG~~~------~~~~~Gd~V~~~---------------------------~~~g~~~ 95 (274)
+....+|.++|||++|+|+++|+++ +.|++||||++. ..+|+|+
T Consensus 83 ~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~a 162 (404)
T 3ip1_A 83 ILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFA 162 (404)
T ss_dssp BSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSB
T ss_pred ccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCc
Confidence 2233578899999999999999999 889999999873 2479999
Q ss_pred eEEeeeCCCeEECCCCCC------HHhhccCcchHHHHHHHHHhh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eE
Q 024011 96 EKVAVPAGQVLPVPSGVS------LKDAAAFPEVACTVWSTVFMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RV 167 (274)
Q Consensus 96 ~~~~~~~~~~~~~p~~~~------~~~aa~l~~~~~~a~~~l~~~-~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v 167 (274)
||+++|.+.++++|+.++ +.++++++.++++||+++... .++++|++|||+|+ |++|++++|+|+..|+ +|
T Consensus 163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V 241 (404)
T 3ip1_A 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKV 241 (404)
T ss_dssp SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence 999999999999999875 456888999999999998655 48999999999998 9999999999999999 89
Q ss_pred EEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh--hHHHhhhcc----ccCCEEEEEecCC
Q 024011 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSL----NIDGRLFIIGTQG 241 (274)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l----~~~g~~v~~g~~~ 241 (274)
+++++++++++.++++|++.+++++..++.+.+.+.++++++|++||++|.. .+..+++.+ +++|+++.+|...
T Consensus 242 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~ 321 (404)
T 3ip1_A 242 ILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARAD 321 (404)
T ss_dssp EEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCC
T ss_pred EEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCC
Confidence 9999999999999999999999999899999999999888999999999987 566666777 9999999999876
Q ss_pred CCccccchhhHhhcceEEEEeecc
Q 024011 242 GAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ..++...++.+++++.|+...
T Consensus 322 ~~-~~~~~~~~~~~~~~i~g~~~~ 344 (404)
T 3ip1_A 322 AK-IPLTGEVFQVRRAQIVGSQGH 344 (404)
T ss_dssp SC-EEECHHHHHHTTCEEEECCCC
T ss_pred CC-CcccHHHHhccceEEEEecCC
Confidence 54 478888899999999998753
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=332.92 Aligned_cols=265 Identities=24% Similarity=0.400 Sum_probs=231.5
Q ss_pred CEEEEEcCCC-------------CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC----------------
Q 024011 1 MKAIVITQPG-------------SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY---------------- 51 (274)
Q Consensus 1 m~a~~~~~~~-------------~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~---------------- 51 (274)
|||+++++++ ....+++++.|.|+|++|||+|||.++|||++|++...+..
T Consensus 31 mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~ 110 (456)
T 3krt_A 31 YRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDL 110 (456)
T ss_dssp EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHH
T ss_pred eEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccc
Confidence 8999999862 12468999999999999999999999999999987653311
Q ss_pred CCCCCCC-CCCCCceeEEEEEecCCCCCCCCCCEEEEEe---------------------------cCCeeeeEEeeeCC
Q 024011 52 PPPKGAS-PYPGLECSGTILSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAG 103 (274)
Q Consensus 52 ~~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~ 103 (274)
.....+| .++|||++|+|+++|+++++|++||+|++.+ .+|+|+||+++|.+
T Consensus 111 ~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~ 190 (456)
T 3krt_A 111 AKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSN 190 (456)
T ss_dssp HHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGG
T ss_pred cccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechH
Confidence 0112345 5899999999999999999999999999853 14999999999999
Q ss_pred CeEECCCCCCHHhhccCcchHHHHHHHHHhh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 104 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
.++++|+++++++|+++++++.|+|+++... .++++|++|||+|++|++|++++|+++..|++++++++++++++.++
T Consensus 191 ~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~ 270 (456)
T 3krt_A 191 QLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270 (456)
T ss_dssp GEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred HeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 9999999999999999999999999998654 78999999999999999999999999999999999999999999999
Q ss_pred HcCCCEEEeCCCCcH-----------------HHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCc
Q 024011 182 DLGADVCINYKTEDF-----------------VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK 244 (274)
Q Consensus 182 ~~g~~~~~~~~~~~~-----------------~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (274)
++|++.+++....++ .+.+.+.+++.++|+|||++|...+..++++++++|+++.+|...+..
T Consensus 271 ~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~ 350 (456)
T 3krt_A 271 AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYM 350 (456)
T ss_dssp HHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTCSE
T ss_pred hhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCCcc
Confidence 999999998776443 477888888788999999999988999999999999999999887666
Q ss_pred cccchhhHhhcceEEEEeecc
Q 024011 245 TELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 245 ~~~~~~~~~~~~~~i~g~~~~ 265 (274)
..++...++.+++++.|+...
T Consensus 351 ~~~~~~~~~~~~~~i~g~~~~ 371 (456)
T 3krt_A 351 HEYDNRYLWMSLKRIIGSHFA 371 (456)
T ss_dssp EEEEHHHHHHTTCEEEECCSC
T ss_pred cccCHHHHHhcCeEEEEeccC
Confidence 677888888889999998754
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=317.86 Aligned_cols=260 Identities=32% Similarity=0.464 Sum_probs=228.8
Q ss_pred CEEEEEcCCCCC--cceEE-EeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSP--EVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~--~~~~~-~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||+++++++++ +.+++ ++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus 24 MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V~ 103 (362)
T 2c0c_A 24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSAS 103 (362)
T ss_dssp EEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTGG
T ss_pred ceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCcc
Confidence 899999998763 46899 999999999999999999999999999999987654445788999999999999999999
Q ss_pred -CCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHH
Q 024011 78 -RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (274)
Q Consensus 78 -~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~ 156 (274)
.|++||||++.. +|+|+||+++|.+.++++|+. ++ ++++++++++|+|+++.+.+++++|+++||+|++|++|+++
T Consensus 104 ~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~~P~~-~~-~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~ 180 (362)
T 2c0c_A 104 ARYTVGQAVAYMA-PGSFAEYTVVPASIATPVPSV-KP-EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFA 180 (362)
T ss_dssp GTCCTTCEEEEEC-SCCSBSEEEEEGGGCEECSSS-CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHH
T ss_pred CCCCCCCEEEEcc-CCcceeEEEEcHHHeEECCCC-ch-HhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHH
Confidence 999999999874 699999999999999999996 44 56678899999999998888999999999999999999999
Q ss_pred HHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEE
Q 024011 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 157 ~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (274)
+|+++..|++|+++++++++++.++++|++.+++.+..++.+.+.+.. +.++|++|||+|...+..++++++++|+++.
T Consensus 181 ~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~-~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 181 MQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 259 (362)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHC-TTCEEEEEECSCTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhc-CCCCCEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 999999999999999999999999999999999988888877777665 3579999999998888899999999999999
Q ss_pred EecCCCCc--c--------ccchhhHhhcceEEEEeecc
Q 024011 237 IGTQGGAK--T--------ELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 237 ~g~~~~~~--~--------~~~~~~~~~~~~~i~g~~~~ 265 (274)
+|...+.. . .+ ...++.+++++.|++..
T Consensus 260 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~ 297 (362)
T 2c0c_A 260 IGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLN 297 (362)
T ss_dssp CCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGG
T ss_pred EeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhh
Confidence 98764321 0 11 24577889999998643
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=318.10 Aligned_cols=255 Identities=22% Similarity=0.315 Sum_probs=219.3
Q ss_pred CEEEEEcCCCCCcceEEE-eecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~-~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||++++++++ ++++ +.|.|+|++|||+|||.+++||++|++.+.+. + ..|.++|||++|+|+++|++++.|
T Consensus 12 mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~p~v~G~e~~G~V~~vG~~v~~~ 84 (371)
T 3gqv_A 12 QTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF-A---TPWAFLGTDYAGTVVAVGSDVTHI 84 (371)
T ss_dssp EEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC------C---CTTSCCCSEEEEEEEEECTTCCSC
T ss_pred ceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC-C---CCCccCccccEEEEEEeCCCCCCC
Confidence 89999998864 9998 99999999999999999999999999988763 2 358899999999999999999999
Q ss_pred CCCCEEEEEe--------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhh-cCC-----------CC
Q 024011 80 KVGDQVCALL--------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT-SHL-----------SP 139 (274)
Q Consensus 80 ~~Gd~V~~~~--------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~-~~~-----------~~ 139 (274)
++||||++.+ .+|+|+||+++|.+.++++|+++++++|+++++++.|+|+++.+. .++ ++
T Consensus 85 ~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~ 164 (371)
T 3gqv_A 85 QVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSK 164 (371)
T ss_dssp CTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSS
T ss_pred CCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCC
Confidence 9999999986 369999999999999999999999999999999999999999776 443 89
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
|++|||+|++|++|++++|+++..|++|+++. ++++++.++++|+++++|++..++.+.+++.++++ +|++||++|+.
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~-~d~v~d~~g~~ 242 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNN-LRYALDCITNV 242 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTC-CCEEEESSCSH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCC-ccEEEECCCch
Confidence 99999999999999999999999999999886 78899999999999999999999999999988764 99999999984
Q ss_pred -hHHHhhhcc-ccCCEEEEEecCCCC-----cccc---chhhHhhcceEEEEeec
Q 024011 220 -YFQRNLGSL-NIDGRLFIIGTQGGA-----KTEL---NITSLFAKRLTVQGIVP 264 (274)
Q Consensus 220 -~~~~~~~~l-~~~g~~v~~g~~~~~-----~~~~---~~~~~~~~~~~i~g~~~ 264 (274)
.+..+++++ +++|+++.+|..... .... ....++.+++++.|++.
T Consensus 243 ~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~ 297 (371)
T 3gqv_A 243 ESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYG 297 (371)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTC
T ss_pred HHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccccccccccc
Confidence 588889999 589999999865431 1111 12346677888877643
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=318.69 Aligned_cols=250 Identities=21% Similarity=0.296 Sum_probs=220.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 5 mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~V~~vG~~v~~~~ 81 (348)
T 3two_A 5 SKGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGIIKEVGKGVKKFK 81 (348)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred EEEEEEccCCCC--CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCC
Confidence 899999987654 999999999999999999999999999999999998664 35789999999999999999999999
Q ss_pred CCCEEEEEe-------------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcch
Q 024011 81 VGDQVCALL-------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123 (274)
Q Consensus 81 ~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 123 (274)
+||||+... .+|+|+||+++|.+.++++|+++++++|++++++
T Consensus 82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~ 161 (348)
T 3two_A 82 IGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA 161 (348)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred CCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence 999997631 1299999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHH
Q 024011 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 124 ~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
+.|||+++.+ .++++|++|||+|+ |++|++++|+++..|++|+++++++++++.++++|++.++ .+.+.+
T Consensus 162 ~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~------- 231 (348)
T 3two_A 162 GITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDPKQC------- 231 (348)
T ss_dssp HHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSGGGC-------
T ss_pred HHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCHHHH-------
Confidence 9999999954 58999999999997 9999999999999999999999999999999999999988 322111
Q ss_pred hCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCC-CCccccchhhHh-hcceEEEEeecc
Q 024011 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLF-AKRLTVQGIVPL 265 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~-~~~~~i~g~~~~ 265 (274)
. .++|++||++|.. .+..++++++++|+++.+|... .....++...++ .+++++.|++..
T Consensus 232 -~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 294 (348)
T 3two_A 232 -K-EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIG 294 (348)
T ss_dssp -C-SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSC
T ss_pred -h-cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecC
Confidence 1 1699999999987 7899999999999999999876 333237777777 899999998765
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=320.79 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=223.4
Q ss_pred CEEEEEcCCCCCcceEEEe--ecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC-
Q 024011 1 MKAIVITQPGSPEVLQLQE--VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS- 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~--~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~- 77 (274)
|||+++++++.+ +++++ .|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 7 mka~~~~~~~~~--l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~V~~vG~~v~~ 83 (360)
T 1piw_A 7 FEGIAIQSHEDW--KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLGPKSNS 83 (360)
T ss_dssp EEEEEECCSSST--TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEECTTCCS
T ss_pred eEEEEEecCCCC--eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEEEEEeCCCCCC
Confidence 899999988744 77888 9999999999999999999999999999987653 34688999999999999999999
Q ss_pred CCCCCCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 78 RWKVGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 78 ~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
+|++||||+.. ..+|+|+||+++|.+.++++|+++++++|+++++
T Consensus 84 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (360)
T 1piw_A 84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLC 163 (360)
T ss_dssp SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGT
T ss_pred CCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhh
Confidence 99999999431 2368999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC-cHHHHHH
Q 024011 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVK 201 (274)
Q Consensus 123 ~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 201 (274)
++.|||+++.+ .++++|++|||+|+ |++|++++|+++..|++|+++++++++++.++++|++.+++.++. ++.+.+.
T Consensus 164 ~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~ 241 (360)
T 1piw_A 164 GGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF 241 (360)
T ss_dssp HHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC
T ss_pred hHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh
Confidence 99999999965 78999999999999 999999999999999999999999999999999999999988766 6654432
Q ss_pred HHhCCCCccEEEECCCh---hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 202 EETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~---~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|++||++|. ..+..++++++++|+++.+|.... ...++...++.+++++.|+...
T Consensus 242 -----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~ 302 (360)
T 1piw_A 242 -----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALG 302 (360)
T ss_dssp -----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCC
T ss_pred -----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecC
Confidence 369999999997 567889999999999999998664 2256666788899999997654
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-46 Score=329.90 Aligned_cols=265 Identities=27% Similarity=0.406 Sum_probs=228.4
Q ss_pred CEEEEEcCCC-----------CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhc----------------CCCCC
Q 024011 1 MKAIVITQPG-----------SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK----------------GSYPP 53 (274)
Q Consensus 1 m~a~~~~~~~-----------~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~----------------g~~~~ 53 (274)
|||++++.++ ....+++++.|.|+|++|||+|||.++|||++|++... +.+..
T Consensus 25 mkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~ 104 (447)
T 4a0s_A 25 YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT 104 (447)
T ss_dssp EEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGG
T ss_pred heeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCcccc
Confidence 8999999887 11359999999999999999999999999999985432 22222
Q ss_pred CCCCC-CCCCCceeEEEEEecCCCCCCCCCCEEEEEec---------------------------CCeeeeEEeeeCCCe
Q 024011 54 PKGAS-PYPGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGGYAEKVAVPAGQV 105 (274)
Q Consensus 54 ~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~~~~~~~~~~~~ 105 (274)
....| .++|||++|+|+++|+++++|++||||++... +|+|+||+++|.+.+
T Consensus 105 ~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~ 184 (447)
T 4a0s_A 105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQL 184 (447)
T ss_dssp GGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGE
T ss_pred ccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHHc
Confidence 22345 68999999999999999999999999997531 599999999999999
Q ss_pred EECCCCCCHHhhccCcchHHHHHHHHHh--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc
Q 024011 106 LPVPSGVSLKDAAAFPEVACTVWSTVFM--TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183 (274)
Q Consensus 106 ~~~p~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 183 (274)
+++|+++++++|++++++++|+|+++.. ..++++|++|||+|++|++|++++|+++..|++++++++++++++.++++
T Consensus 185 ~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l 264 (447)
T 4a0s_A 185 LPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL 264 (447)
T ss_dssp EECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 9999999999999999999999999864 37899999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCCCc------------------HHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCcc
Q 024011 184 GADVCINYKTED------------------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT 245 (274)
Q Consensus 184 g~~~~~~~~~~~------------------~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~ 245 (274)
|++.+++..+.+ +.+.+.+.+ +.++|++||++|...+..++++++++|+++.+|...+...
T Consensus 265 Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~ 343 (447)
T 4a0s_A 265 GCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLH 343 (447)
T ss_dssp TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCSEE
T ss_pred CCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCccc
Confidence 999888754332 256777777 5689999999999888999999999999999998776666
Q ss_pred ccchhhHhhcceEEEEeeccc
Q 024011 246 ELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 246 ~~~~~~~~~~~~~i~g~~~~~ 266 (274)
.++...++.+++++.|+....
T Consensus 344 ~~~~~~~~~~~~~i~g~~~~~ 364 (447)
T 4a0s_A 344 TFDNRYLWMKLKKIVGSHGAN 364 (447)
T ss_dssp EEEHHHHHHTTCEEEECCSCC
T ss_pred ccCHHHHHhCCCEEEecCCCC
Confidence 778888888999999987653
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=318.37 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=224.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCC--------CCCCCeEEEEEeeeecChhhhHhhcCCC-C-CCCCCCCCCCCceeEEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDP--------QIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~--------~~~~~ev~V~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~ 70 (274)
|||+++++++. +++++.|.| +|++|||+|||.++|||++|++.+.+.. . ....+|.++|||++|+|+
T Consensus 9 mka~~~~~~~~---l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~ 85 (363)
T 3m6i_A 9 NIGVFTNPQHD---LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVI 85 (363)
T ss_dssp CEEEEECTTCC---EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEE
T ss_pred ceeEEEeCCCc---EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEE
Confidence 89999997654 999999999 9999999999999999999999887432 1 223568899999999999
Q ss_pred EecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
++|+++++|++||||++.. .+|+|+||+++|.+.++++|+ +++++|+++ .
T Consensus 86 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~ 163 (363)
T 3m6i_A 86 AVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-E 163 (363)
T ss_dssp EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-H
T ss_pred EECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh-h
Confidence 9999999999999998742 479999999999999999999 999999976 6
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC-----CCcH
Q 024011 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK-----TEDF 196 (274)
Q Consensus 123 ~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~ 196 (274)
++.|+|+++ +..++++|++|||+|+ |++|++++|+++..|++ |+++++++++++.++++ ++.++++. .+++
T Consensus 164 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~ 240 (363)
T 3m6i_A 164 PLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEES 240 (363)
T ss_dssp HHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHH
T ss_pred HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHH
Confidence 889999999 7788999999999998 99999999999999997 99999999999999998 65444332 3567
Q ss_pred HHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 197 VARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+.+.+.+++.++|++||++|+. .+..++++++++|+++.+|..... ..++...++.+++++.|++.+
T Consensus 241 ~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~ 309 (363)
T 3m6i_A 241 AKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE-IQIPFMRASVREVDLQFQYRY 309 (363)
T ss_dssp HHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC-CCCCHHHHHHHTCEEEECCSC
T ss_pred HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC-ccccHHHHHhcCcEEEEccCC
Confidence 78888888888999999999987 588999999999999999976543 467888899999999998754
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-46 Score=315.86 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=220.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++++..+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++ +++.|+
T Consensus 4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~ 81 (328)
T 1xa0_A 4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFR 81 (328)
T ss_dssp EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCC
T ss_pred ceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCC
Confidence 899999998865568999999999999999999999999999999998865543456899999999999995 568899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH--hhcCCCCCC-EEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~g~-~vlI~Ga~g~ 151 (274)
+||||++.. .+|+|+||+++|.+.++++|+++++++|+++++++.|+|.++. ...++++|+ +|||+|++|+
T Consensus 82 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~ 161 (328)
T 1xa0_A 82 EGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGG 161 (328)
T ss_dssp TTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSH
T ss_pred CCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCH
Confidence 999999763 3699999999999999999999999999999999999998775 346788886 9999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|++++|+++..|++|+++++++++++.++++|++.++|.++.+ .+.+.+. .+.++|++||++|...+..++++++++
T Consensus 162 vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~l~~~ 239 (328)
T 1xa0_A 162 VGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPL-DKQRWAAAVDPVGGRTLATVLSRMRYG 239 (328)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------C-CSCCEEEEEECSTTTTHHHHHHTEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHHh-cCCcccEEEECCcHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999876543 2223333 334799999999988889999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|...+....++...++.+++++.|+.
T Consensus 240 G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 271 (328)
T 1xa0_A 240 GAVAVSGLTGGAEVPTTVHPFILRGVSLLGID 271 (328)
T ss_dssp EEEEECSCCSSSCCCCCSHHHHHTTCEEEECC
T ss_pred CEEEEEeecCCCCCCCchhhhhhcCceEEEEe
Confidence 99999998765445666777888999999974
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=315.19 Aligned_cols=255 Identities=24% Similarity=0.324 Sum_probs=219.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++..++++ .+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus 23 ~~a~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~ 99 (369)
T 1uuf_A 23 IKAVGAYSAKQ--PLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQVEKYA 99 (369)
T ss_dssp CEEEEBSSTTS--CCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred EEEEEEcCCCC--CcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEEEECCCCCCCC
Confidence 78988876644 4999999999999999999999999999999999987653 34689999999999999999999999
Q ss_pred CCCEEEEE------------------------------------ecCCeeeeEEeeeCCCeEECCCC-CCHHhhccCcch
Q 024011 81 VGDQVCAL------------------------------------LGGGGYAEKVAVPAGQVLPVPSG-VSLKDAAAFPEV 123 (274)
Q Consensus 81 ~Gd~V~~~------------------------------------~~~g~~~~~~~~~~~~~~~~p~~-~~~~~aa~l~~~ 123 (274)
+||||++. ..+|+|+||+++|.+.++++|++ +++++|++++++
T Consensus 100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~ 179 (369)
T 1uuf_A 100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA 179 (369)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence 99999852 13589999999999999999999 999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHH
Q 024011 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 124 ~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
++|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++++|++.+++..+.++.+.+
T Consensus 180 ~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~--- 254 (369)
T 1uuf_A 180 GITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAH--- 254 (369)
T ss_dssp HHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT---
T ss_pred HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh---
Confidence 9999999965 58999999999997 899999999999999999999999999999999999999988765443322
Q ss_pred hCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
. .++|++||++|.. .+..++++++++|+++.+|........++...++.+++++.|++..
T Consensus 255 ~--~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 315 (369)
T 1uuf_A 255 L--KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIG 315 (369)
T ss_dssp T--TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSC
T ss_pred h--cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecC
Confidence 2 4699999999976 5888999999999999999865432256777788899999998654
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=312.85 Aligned_cols=225 Identities=20% Similarity=0.285 Sum_probs=198.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++ .++.+++++.|.|+|++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 5 Mka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 81 (315)
T 3goh_A 5 HQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIVKVGAKVDSKM 81 (315)
T ss_dssp EEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred eEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence 89999996 3446999999999999999999999999999999999987754 35789999999999999999999999
Q ss_pred CCCEEEEEec---CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||||++... +|+|+||+++|.+.++++|+++++++||+++++++|||+++ +..++++|++|||+|+ |++|++++
T Consensus 82 vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~ 159 (315)
T 3goh_A 82 LGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLT 159 (315)
T ss_dssp TTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHHHHHHH
T ss_pred CCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHHHHHHH
Confidence 9999999863 79999999999999999999999999999999999999999 8889999999999999 99999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (274)
|+++..|++|++++ ++++++.++++|++.+++ + .+++ +.++|++||++|+..+..++++++++|+++.+
T Consensus 160 qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~----d-~~~v-----~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 160 QMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYR----E-PSQV-----TQKYFAIFDAVNSQNAAALVPSLKANGHIICI 228 (315)
T ss_dssp HHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEES----S-GGGC-----CSCEEEEECC-------TTGGGEEEEEEEEEE
T ss_pred HHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEc----C-HHHh-----CCCccEEEECCCchhHHHHHHHhcCCCEEEEE
Confidence 99999999999999 999999999999998884 2 2222 56799999999998788899999999999999
Q ss_pred ecCC
Q 024011 238 GTQG 241 (274)
Q Consensus 238 g~~~ 241 (274)
+...
T Consensus 229 g~~~ 232 (315)
T 3goh_A 229 QDRI 232 (315)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 7543
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=315.65 Aligned_cols=252 Identities=15% Similarity=0.183 Sum_probs=222.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCC---CCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA---SPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~---p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||++++++++ .+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+ |.++|||++| |+++|++ +
T Consensus 1 MkA~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G-V~~vG~~-~ 75 (357)
T 2b5w_A 1 MKAIAVKRGED--RPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG-VVVDPND-T 75 (357)
T ss_dssp CEEEEEETTCS--SCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred CeEEEEeCCCC--ceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE-EEEECCC-C
Confidence 99999999876 3889999999999999999999999999999999987653 235 7899999999 9999999 9
Q ss_pred CCCCCCEEEEE--------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 78 RWKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 78 ~~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+|++||||++. ..+|+|+||+++|++.++++|++++ ++ ++++.+++
T Consensus 76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~~~~ 153 (357)
T 2b5w_A 76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIEPIS 153 (357)
T ss_dssp SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHHHHH
T ss_pred CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhchHH
Confidence 99999999875 1259999999999999999999999 65 45888999
Q ss_pred HHHHHHHhhcCCCCC------CEEEEecCCchHHHHH-HHHH-HHcCCe-EEEEecChh---hHHHHHHcCCCEEEeCCC
Q 024011 126 TVWSTVFMTSHLSPG------ESFLVHGGSSGIGTFA-IQMG-KCQGVR-VFVTAGSEE---KLAVCKDLGADVCINYKT 193 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g------~~vlI~Ga~g~iG~~~-~~~~-~~~g~~-v~~~~~~~~---~~~~~~~~g~~~~~~~~~ 193 (274)
|||+++ +..++++| ++|||+|+ |++|+++ +|+| +..|++ |++++++++ +++.++++|++++ ++++
T Consensus 154 ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~ 230 (357)
T 2b5w_A 154 ITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ 230 (357)
T ss_dssp HHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT
T ss_pred HHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc
Confidence 999999 56788999 99999999 9999999 9999 999997 999999998 9999999999999 8887
Q ss_pred CcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhH----hhcceEEEEeecc
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL----FAKRLTVQGIVPL 265 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~----~~~~~~i~g~~~~ 265 (274)
.++.+ +.+. .+ ++|++||++|.. .+..++++++++|+++.+|........++...+ +.+++++.|+...
T Consensus 231 ~~~~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 304 (357)
T 2b5w_A 231 TPVED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNS 304 (357)
T ss_dssp SCGGG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCC
T ss_pred cCHHH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccC
Confidence 77777 7766 55 899999999986 688999999999999999987633456777777 8899999997654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=311.98 Aligned_cols=237 Identities=31% Similarity=0.405 Sum_probs=212.0
Q ss_pred CEEEEEcCCCCCcceEE-EeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCC--------------CCCCCCCCCCCc
Q 024011 1 MKAIVITQPGSPEVLQL-QEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYP--------------PPKGASPYPGLE 64 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~-~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e 64 (274)
|||+++++++.+..+++ ++.|.|+| ++|||+|||.++|||++|++.+.|..+ ....+|.++|||
T Consensus 22 mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E 101 (375)
T 2vn8_A 22 SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRD 101 (375)
T ss_dssp EEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCCE
T ss_pred ceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCccccee
Confidence 89999999988777999 99999985 999999999999999999999987532 112368899999
Q ss_pred eeEEEEEecCCCCCCCCCCEEEEEec---CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcC----C
Q 024011 65 CSGTILSVGKNVSRWKVGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH----L 137 (274)
Q Consensus 65 ~~G~V~~vG~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~----~ 137 (274)
++|+|+++|+++++|++||||++... +|+|+||+++|.+.++++|+++++++|++++++++|||+++.+.++ +
T Consensus 102 ~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~ 181 (375)
T 2vn8_A 102 VSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN 181 (375)
T ss_dssp EEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTT
T ss_pred eeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999998753 6999999999999999999999999999999999999999977778 8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++|++|||+|++|++|++++|+++..|++|++++ ++++++.++++|++.++|.++.++.+.+.+. .++|++||++|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~---~g~D~vid~~g 257 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSL---KPFDFILDNVG 257 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTS---CCBSEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhc---CCCCEEEECCC
Confidence 9999999999889999999999999999999988 6788899999999999998888877766542 46999999999
Q ss_pred hhh--HHHhhhccccCCEEEEEecCC
Q 024011 218 ASY--FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 218 ~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (274)
... +..++++++++|+++.+|...
T Consensus 258 ~~~~~~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 258 GSTETWAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp TTHHHHGGGGBCSSSCCEEEESCCSH
T ss_pred ChhhhhHHHHHhhcCCcEEEEeCCCc
Confidence 873 488899999999999998653
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-45 Score=313.14 Aligned_cols=255 Identities=23% Similarity=0.329 Sum_probs=219.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-CCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-PKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++++ +++++.|.|+|++|||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|++ ++|
T Consensus 4 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~ 80 (344)
T 2h6e_A 4 SKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV 80 (344)
T ss_dssp EEBCEECSCCC-------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred eEEEEEecCCCC--CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence 899999988743 888999999999999999999999999999999987652 2356889999999999999999 999
Q ss_pred CCCCEEEEEe---------------------------cCCeeeeEEeee-CCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 80 KVGDQVCALL---------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
++||||++.. .+|+|+||+++| .+.++++ +++++++|+++++++.|+|+++
T Consensus 81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al 159 (344)
T 2h6e_A 81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAI 159 (344)
T ss_dssp CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHH
Confidence 9999997752 369999999999 9999999 9999999999999999999999
Q ss_pred Hhh----cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHh
Q 024011 132 FMT----SHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEET 204 (274)
Q Consensus 132 ~~~----~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~ 204 (274)
... .++ +|++|||+|+ |++|++++|+++.. |++|+++++++++++.++++|++.++++++ .++ +.+.+
T Consensus 160 ~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~---~~~~~ 234 (344)
T 2h6e_A 160 RQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESL---INKLT 234 (344)
T ss_dssp HHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHH---HHHHH
T ss_pred HhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHH---HHHhh
Confidence 665 278 9999999999 99999999999999 999999999999999999999999987654 333 33344
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+.++|++||++|.. .+..++++++++|+++.+|..... ..++...++.+++++.|+...
T Consensus 235 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~ 295 (344)
T 2h6e_A 235 DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR-VSLEAFDTAVWNKKLLGSNYG 295 (344)
T ss_dssp TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CCCCHHHHHHTTCEEEECCSC
T ss_pred cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC-cccCHHHHhhCCcEEEEEecC
Confidence 455799999999987 688999999999999999986543 467777888899999998654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=305.68 Aligned_cols=258 Identities=22% Similarity=0.300 Sum_probs=226.8
Q ss_pred CEEEEEcC--CC--CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCc----eeEEEEEe
Q 024011 1 MKAIVITQ--PG--SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLE----CSGTILSV 72 (274)
Q Consensus 1 m~a~~~~~--~~--~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e----~~G~V~~v 72 (274)
||+++++. ++ .++.+++++.|.|+|++|||+|||.+++||++|.+.+.+.... ..|.++||| ++|+|++.
T Consensus 8 mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~--~~p~~~G~e~g~~~~G~V~~~ 85 (336)
T 4b7c_A 8 NRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY--IPPVGIGEVMRALGVGKVLVS 85 (336)
T ss_dssp EEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS--SCCCCTTSBCCCEEEEEEEEE
T ss_pred ccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc--CCCCCCCcccCCceEEEEEec
Confidence 79999986 23 3567999999999999999999999999999999888764322 346777777 79999994
Q ss_pred cCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhh--ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCc
Q 024011 73 GKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA--AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150 (274)
Q Consensus 73 G~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a--a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g 150 (274)
+++.|++||||++. |+|+||+++|.+.++++|+++++.++ ++++++++|||+++.+..++++|+++||+|++|
T Consensus 86 --~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g 160 (336)
T 4b7c_A 86 --KHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG 160 (336)
T ss_dssp --CSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTS
T ss_pred --CCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCC
Confidence 58899999999876 88999999999999999999987776 789999999999998889999999999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccc
Q 024011 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229 (274)
Q Consensus 151 ~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~ 229 (274)
++|++++|+++..|++|+++++++++++.+ +++|++.++|..+.++.+.+.+.++ +++|++|||+|...+..++++++
T Consensus 161 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~l~ 239 (336)
T 4b7c_A 161 AVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECP-KGIDVFFDNVGGEILDTVLTRIA 239 (336)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcC-CCceEEEECCCcchHHHHHHHHh
Confidence 999999999999999999999999999999 8999999999988899988888774 58999999999988899999999
Q ss_pred cCCEEEEEecCCCC------ccccchhhHhhcceEEEEeeccc
Q 024011 230 IDGRLFIIGTQGGA------KTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 230 ~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
++|+++.+|..... ...++...++.+++++.|+....
T Consensus 240 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 282 (336)
T 4b7c_A 240 FKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMD 282 (336)
T ss_dssp EEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGG
T ss_pred hCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhh
Confidence 99999999876521 13566677889999999988653
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=316.39 Aligned_cols=259 Identities=25% Similarity=0.378 Sum_probs=222.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++.+..+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++ ++++|+
T Consensus 5 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~~ 82 (330)
T 1tt7_A 5 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRFA 82 (330)
T ss_dssp EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTCC
T ss_pred ceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCCC
Confidence 899999998765569999999999999999999999999999999998876544457889999999999996 467899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH--hhcCCCCCC-EEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~g~-~vlI~Ga~g~ 151 (274)
+||||++.. .+|+|+||+++|.+.++++|+++++++|+++++++.|+|.++. ...++++|+ ++||+|++|+
T Consensus 83 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~ 162 (330)
T 1tt7_A 83 EGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGG 162 (330)
T ss_dssp TTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSH
T ss_pred CCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCH
Confidence 999999763 4699999999999999999999999999999999999998775 346788886 9999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|++++|+++..|++|+++++++++++.++++|++.++|.++.+ .+.+.+. .+.++|++||++|...+..++++++++
T Consensus 163 vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~l~~~ 240 (330)
T 1tt7_A 163 VGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKAL-SKQQWQGAVDPVGGKQLASLLSKIQYG 240 (330)
T ss_dssp HHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSS-CCCCEEEEEESCCTHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHh-hcCCccEEEECCcHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999988754211 0111122 234799999999998889999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|...+....++...++.+++++.|+.
T Consensus 241 G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 272 (330)
T 1tt7_A 241 GSVAVSGLTGGGEVPATVYPFILRGVSLLGID 272 (330)
T ss_dssp EEEEECCCSSCSCEEECSHHHHTSCCEEEECC
T ss_pred CEEEEEecCCCCccCcchHHHHhcCeEEEEEe
Confidence 99999998765445667777888999999974
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=307.91 Aligned_cols=254 Identities=24% Similarity=0.336 Sum_probs=217.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|++++.. +.+..+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 10 ~~a~~~~--~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~ 86 (357)
T 2cf5_A 10 TTGWAAR--DPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_dssp EEEEEEC--STTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEEEECSSCCSCC
T ss_pred eEEEEEc--cCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCC
Confidence 3455554 44456999999999999999999999999999999999887653 35688999999999999999999999
Q ss_pred CCCEEEEEe-----------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 81 VGDQVCALL-----------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 81 ~Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+||||+... .+|+|+||+++|.+.++++|+++++++|+++++++.
T Consensus 87 vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ 166 (357)
T 2cf5_A 87 VGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGV 166 (357)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHH
T ss_pred CCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHH
Confidence 999997521 469999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHH
Q 024011 126 TVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 126 ~a~~~l~~~~~~~-~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
|+|+++.+ .+++ +|++|||+|+ |++|++++|+++..|++|+++++++++++.++ ++|++.+++.++. +.+.+.
T Consensus 167 ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~ 241 (357)
T 2cf5_A 167 TVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ---AKMSEL 241 (357)
T ss_dssp HHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCH---HHHHHS
T ss_pred HHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccH---HHHHHh
Confidence 99999854 5788 9999999996 99999999999999999999999999998888 8999999887653 334444
Q ss_pred hCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++ ++|+|||++|.. .+..++++++++|+++.+|........++.. ++.+++++.|++..
T Consensus 242 ~~--g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~ 301 (357)
T 2cf5_A 242 AD--SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIG 301 (357)
T ss_dssp TT--TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSC
T ss_pred cC--CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccC
Confidence 43 699999999975 5788999999999999999765433225666 88899999998754
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=316.39 Aligned_cols=256 Identities=20% Similarity=0.309 Sum_probs=224.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CC-----CeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KD-----DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~-----~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~ 74 (274)
|||+++++++ .+++++.|.|+| ++ |||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|+
T Consensus 3 MkA~~~~~~~---~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~--~~~p~v~GhE~~G~V~~vG~ 77 (398)
T 2dph_A 3 NKSVVYHGTR---DLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEITGEVVEKGS 77 (398)
T ss_dssp EEEEEEEETT---EEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC--CCTTCBCCCCEEEEEEEECT
T ss_pred cEEEEEEcCC---CEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC--CCCCcccCCceEEEEEEECC
Confidence 8999999865 499999999988 68 9999999999999999999998643 34689999999999999999
Q ss_pred CCCCCCCCCEEEEEe--------------------------------------cCCeeeeEEeeeCC--CeEECCCCCCH
Q 024011 75 NVSRWKVGDQVCALL--------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL 114 (274)
Q Consensus 75 ~~~~~~~Gd~V~~~~--------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (274)
+++.|++||||++.. .+|+|+||+++|.+ .++++|+++++
T Consensus 78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~ 157 (398)
T 2dph_A 78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA 157 (398)
T ss_dssp TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence 999999999998631 25899999999987 89999999999
Q ss_pred Hh----hccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEE
Q 024011 115 KD----AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 115 ~~----aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (274)
++ +++++++++|+|+++ +..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++ ++
T Consensus 158 ~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i 234 (398)
T 2dph_A 158 MEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TI 234 (398)
T ss_dssp HHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EE
T ss_pred hhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EE
Confidence 98 888999999999999 6789999999999997 9999999999999999 999999999999999999996 78
Q ss_pred eCCCCcH-HHHHHHHhCCCCccEEEECCChh---------------hHHHhhhccccCCEEEEEecCC------------
Q 024011 190 NYKTEDF-VARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQG------------ 241 (274)
Q Consensus 190 ~~~~~~~-~~~~~~~~~~~~~d~vi~~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~------------ 241 (274)
+.+..++ .+.+.+.+++.++|+|||++|.. .+..++++++++|+++.+|...
T Consensus 235 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~ 314 (398)
T 2dph_A 235 DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAG 314 (398)
T ss_dssp ETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHH
T ss_pred cCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccccc
Confidence 8877775 78888888777899999999975 4788999999999999998762
Q ss_pred CCccccchhhHhhcceEEEEeec
Q 024011 242 GAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.....++...++.+++++.|+..
T Consensus 315 ~~~~~~~~~~~~~k~~~i~g~~~ 337 (398)
T 2dph_A 315 SGRLHLDFGKMWTKSIRIMTGMA 337 (398)
T ss_dssp TTEEEEEHHHHHHTTCEEECSSC
T ss_pred CCcccccHHHHhhcCCEEEEecc
Confidence 12235667778889999988654
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=302.36 Aligned_cols=243 Identities=35% Similarity=0.558 Sum_probs=211.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++.. +++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+
T Consensus 1 Mka~~~~~~g~~~~--l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~---------- 68 (302)
T 1iz0_A 1 MKAWVLKRLGGPLE--LVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE---------- 68 (302)
T ss_dssp CEEEEECSTTSCEE--EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred CeEEEEcCCCCchh--eEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence 99999999887643 458899999999999999999999999999998766444578999999999997
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
||||++...+|+|+||+++|.+.++++|++++++++++++++++|+|+++.+.. +++|++++|+|++|++|++++|++
T Consensus 69 -GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a 146 (302)
T 1iz0_A 69 -GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVA 146 (302)
T ss_dssp -TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHH
T ss_pred -CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHH
Confidence 999999987899999999999999999999999999999999999999997777 999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+..|++|+++++++++++.++++|++.++|.++ .++.+.+ .++|++|| +|...+..++++++++|+++.+|.
T Consensus 147 ~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~------~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 147 RAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW------GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp HHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT------TSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC--
T ss_pred HHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh------cCceEEEE-CCHHHHHHHHHhhccCCEEEEEeC
Confidence 999999999999999999999999999888765 4444433 46999999 998778999999999999999998
Q ss_pred CCCCccccchhhHhhcceEEEEeec
Q 024011 240 QGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.......++...++.+++++.|+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~g~~~ 244 (302)
T 1iz0_A 220 AEGEVAPIPPLRLMRRNLAVLGFWL 244 (302)
T ss_dssp -----CCCCTTHHHHTTCEEEECCH
T ss_pred CCCCCCCcCHHHHHhCCCeEEEEec
Confidence 7654335677778889999999864
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=306.19 Aligned_cols=258 Identities=21% Similarity=0.316 Sum_probs=224.4
Q ss_pred CEEEEE-cCC---CCC--cceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcC----CCCCCCCCCCCCCCceeEEE
Q 024011 1 MKAIVI-TQP---GSP--EVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKG----SYPPPKGASPYPGLECSGTI 69 (274)
Q Consensus 1 m~a~~~-~~~---~~~--~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g----~~~~~~~~p~~~G~e~~G~V 69 (274)
||++++ +.+ +++ +.+++++.|.|+| ++|||+|||.++|||++|++.+.+ .++.+..+|.++|||++|+|
T Consensus 9 mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~V 88 (357)
T 2zb4_A 9 VQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGII 88 (357)
T ss_dssp EEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEEE
T ss_pred ceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEEE
Confidence 899999 565 555 6799999999999 999999999999999999987775 23223356889999999999
Q ss_pred EEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCC-----CHHhhccCcchHHHHHHHHHhhcCCCCC--CE
Q 024011 70 LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV-----SLKDAAAFPEVACTVWSTVFMTSHLSPG--ES 142 (274)
Q Consensus 70 ~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~-----~~~~aa~l~~~~~~a~~~l~~~~~~~~g--~~ 142 (274)
++ ++++.|++||||++. +|+|+||+++|.+.++++|+++ +++ +++++++++|||+++.+..++++| ++
T Consensus 89 ~~--~~v~~~~vGdrV~~~--~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~ 163 (357)
T 2zb4_A 89 EE--SKHTNLTKGDFVTSF--YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKT 163 (357)
T ss_dssp EE--ECSTTCCTTCEEEEE--EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCE
T ss_pred Ee--cCCCCCCCCCEEEec--CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccE
Confidence 99 889999999999987 3899999999999999999999 555 677999999999999888899999 99
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+||+|++|++|++++|+++..|+ +|+++++++++++.+++ +|++.++|.++.++.+.+.+.+.+ ++|++|||+|...
T Consensus 164 vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~d~vi~~~G~~~ 242 (357)
T 2zb4_A 164 MVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA-GVDVYFDNVGGNI 242 (357)
T ss_dssp EEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT-CEEEEEESCCHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC-CCCEEEECCCHHH
Confidence 99999999999999999999999 99999999999988886 999999998888888888887766 8999999999888
Q ss_pred HHHhhhccccCCEEEEEecCCCCccccch---------hhHhhcceEEEEeec
Q 024011 221 FQRNLGSLNIDGRLFIIGTQGGAKTELNI---------TSLFAKRLTVQGIVP 264 (274)
Q Consensus 221 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~---------~~~~~~~~~i~g~~~ 264 (274)
+..++++++++|+++.+|........++. ..++.+++++.|+..
T Consensus 243 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 295 (357)
T 2zb4_A 243 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLV 295 (357)
T ss_dssp HHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCG
T ss_pred HHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeeh
Confidence 89999999999999999876532222332 457788999999865
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=305.13 Aligned_cols=256 Identities=24% Similarity=0.322 Sum_probs=222.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+..+..++.+..+++++.|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 15 mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~ 93 (366)
T 1yqd_A 15 VKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVTEVGSKVKKVN 93 (366)
T ss_dssp EEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred eeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEEEECCCCCcCC
Confidence 67777776666667999999999999999999999999999999999886643 34688999999999999999999999
Q ss_pred CCCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 81 VGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+||||+.. ..+|+|+||+++|.+.++++|+++++++|+++++++.
T Consensus 94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ 173 (366)
T 1yqd_A 94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI 173 (366)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence 99999752 1468999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHH
Q 024011 126 TVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 126 ~a~~~l~~~~~~~-~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
|+|+++.+ .+++ +|++|||+|+ |++|++++|+++..|++|+++++++++++.++ ++|++.++|.++. +.+.+.
T Consensus 174 ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~---~~~~~~ 248 (366)
T 1yqd_A 174 TVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ---EQMQAA 248 (366)
T ss_dssp HHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCH---HHHHHT
T ss_pred HHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCH---HHHHHh
Confidence 99999855 5677 9999999996 99999999999999999999999999998877 8999999887653 334444
Q ss_pred hCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++ ++|+|||++|.. .+..++++++++|+++.+|..... ..++...++.+++++.|++..
T Consensus 249 ~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~ 308 (366)
T 1yqd_A 249 AG--TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP-LELPAFSLIAGRKIVAGSGIG 308 (366)
T ss_dssp TT--CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC-EEECHHHHHTTTCEEEECCSC
T ss_pred hC--CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC-CCcCHHHHHhCCcEEEEecCC
Confidence 43 699999999975 578899999999999999986543 457777888999999998654
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=307.83 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=220.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCe------EEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEec
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDE------VLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG 73 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~e------v~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 73 (274)
|||+++++++ .+++++.|.|+|+ ++| |+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|
T Consensus 3 Mka~~~~~~~---~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~p~v~GhE~~G~V~~vG 77 (398)
T 1kol_A 3 NRGVVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHEITGEVIEKG 77 (398)
T ss_dssp EEEEEEEETT---EEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCCEEEEEEEEC
T ss_pred cEEEEEecCC---ceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC--CCCCcccCcccEEEEEEEC
Confidence 8999999765 4999999999997 899 99999999999999999998653 2468899999999999999
Q ss_pred CCCCCCCCCCEEEEE-------------------------------------ecCCeeeeEEeeeCC--CeEECCCCCCH
Q 024011 74 KNVSRWKVGDQVCAL-------------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSL 114 (274)
Q Consensus 74 ~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (274)
++++.|++||||+.. ..+|+|+||+++|.+ .++++|+++++
T Consensus 78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~ 157 (398)
T 1kol_A 78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA 157 (398)
T ss_dssp TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence 999999999999742 125899999999986 89999999998
Q ss_pred Hh----hccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEE
Q 024011 115 KD----AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 115 ~~----aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (274)
++ ++++++++.|+|+++. ..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++ ++
T Consensus 158 ~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i 234 (398)
T 1kol_A 158 MEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IA 234 (398)
T ss_dssp HHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EE
T ss_pred hhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EE
Confidence 88 7889999999999995 688999999999996 9999999999999999 799999999999999999997 67
Q ss_pred eCCCCc-HHHHHHHHhCCCCccEEEECCChh----------------hHHHhhhccccCCEEEEEecCC-CC--------
Q 024011 190 NYKTED-FVARVKEETGGKGVDVILDCMGAS----------------YFQRNLGSLNIDGRLFIIGTQG-GA-------- 243 (274)
Q Consensus 190 ~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~----------------~~~~~~~~l~~~g~~v~~g~~~-~~-------- 243 (274)
+++..+ +.+.+.+.+++.++|+|||++|.. .+..++++++++|+++.+|... +.
T Consensus 235 ~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 314 (398)
T 1kol_A 235 DLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA 314 (398)
T ss_dssp ETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHH
T ss_pred ccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccccc
Confidence 766544 788888888777899999999975 4788999999999999998752 11
Q ss_pred ---ccccchhhHhhcceEEEEee
Q 024011 244 ---KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 244 ---~~~~~~~~~~~~~~~i~g~~ 263 (274)
...++...++.+++++.++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~ 337 (398)
T 1kol_A 315 KIGSLSIRFGLGWAKSHSFHTGQ 337 (398)
T ss_dssp HTTCCCCCHHHHHHTTCEEEESS
T ss_pred ccccccccHHHHhhcccEEEecc
Confidence 23456666788889988754
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=308.50 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=217.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC----------------------------
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP---------------------------- 52 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~---------------------------- 52 (274)
||+++.... +..+++++.|.|+|++|||+|||.+++||++|++.+.|.++
T Consensus 8 mka~v~~~~--~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~ 85 (379)
T 3iup_A 8 LRSRIKSSG--ELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMA 85 (379)
T ss_dssp EEEEECTTS--EEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHG
T ss_pred HHHHHhcCC--CCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccc
Confidence 788877532 23599999999999999999999999999999999988531
Q ss_pred CCCCCCCCCCCceeEEEEEecCCC-CCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 53 PPKGASPYPGLECSGTILSVGKNV-SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 53 ~~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
....+|.++|||++|+|+++|+++ ++|++||||++.. +|+|+||+++|.+.++++|+++++++|+++++..+|+|+++
T Consensus 86 ~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~ 164 (379)
T 3iup_A 86 GRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV 164 (379)
T ss_dssp GGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH
T ss_pred cccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH
Confidence 012467899999999999999999 8899999999874 69999999999999999999999999999999999999877
Q ss_pred HhhcCCCCCCEEEEec-CCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~G-a~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
... . ++|+++||+| ++|++|++++|+|+..|++|+++++++++++.++++|++.++|+++.++.+.+.+.++++++|
T Consensus 165 ~~~-~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d 242 (379)
T 3iup_A 165 ETM-R-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGAT 242 (379)
T ss_dssp HHH-H-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHHHHCCC
T ss_pred HHh-c-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhcCCCce
Confidence 554 3 8899999996 789999999999999999999999999999999999999999999999999999988777899
Q ss_pred EEEECCChh-hHHHhhhccc-----cC-----------CEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 211 VILDCMGAS-YFQRNLGSLN-----ID-----------GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 211 ~vi~~~g~~-~~~~~~~~l~-----~~-----------g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++|||+|+. ....++++++ ++ |+++.+|..... .+++..++.+++++.|+..
T Consensus 243 ~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~g~~~ 311 (379)
T 3iup_A 243 IAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMGGWLL 311 (379)
T ss_dssp EEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEEECCH
T ss_pred EEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC--ccccccccccceEEEEEEe
Confidence 999999975 3566777764 44 566666554322 2334456677888888764
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-43 Score=301.84 Aligned_cols=251 Identities=18% Similarity=0.254 Sum_probs=215.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCC-CeEEEEEeeeecChhhhHhhcC--CCCCCCCC---CCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKG--SYPPPKGA---SPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~-~ev~V~v~~~~i~~~D~~~~~g--~~~~~~~~---p~~~G~e~~G~V~~vG~ 74 (274)
|||+++++++++ +++++.|.|+|++ |||+|||.++|||++|++.+.| .++. ..+ |.++|||++|+|++ +
T Consensus 1 MkA~~~~~~g~~--l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~~~p~v~G~E~~G~V~~--~ 75 (366)
T 2cdc_A 1 MKAIIVKPPNAG--VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST-LPKGKDFLVLGHEAIGVVEE--S 75 (366)
T ss_dssp CEEEEECTTSCC--CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEEEECS--C
T ss_pred CeEEEEeCCCCc--eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC-CCcCCCCCcCCcceEEEEEe--C
Confidence 999999998863 8899999999999 9999999999999999999988 5542 234 88999999999999 7
Q ss_pred CCCCCCCCCEEEEEe------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchH
Q 024011 75 NVSRWKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA 124 (274)
Q Consensus 75 ~~~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~ 124 (274)
+ ++|++||||++.. .+|+|+||+++|.+.++++|++++ ++|+ ++.++
T Consensus 76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~ 152 (366)
T 2cdc_A 76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQPL 152 (366)
T ss_dssp C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHHH
T ss_pred C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCcH
Confidence 7 8899999998731 469999999999999999999999 7765 77899
Q ss_pred HHHHHHHH--h--hcCCC--C-------CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh---hhHHHHHHcCCCEE
Q 024011 125 CTVWSTVF--M--TSHLS--P-------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCKDLGADVC 188 (274)
Q Consensus 125 ~~a~~~l~--~--~~~~~--~-------g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~---~~~~~~~~~g~~~~ 188 (274)
.|+|+++. + ..+++ + |++|||+|+ |++|++++|+++..|++|+++++++ ++++.++++|++.+
T Consensus 153 ~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 153 ADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp HHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 99999996 4 67888 8 999999999 9999999999999999999999998 88899999999988
Q ss_pred EeCCCCcHHHHHHHHhCCCCccEEEECCChh-hH-HHhhhccccCCEEEEEecCCCCccccchhh---HhhcceEEEEee
Q 024011 189 INYKTEDFVARVKEETGGKGVDVILDCMGAS-YF-QRNLGSLNIDGRLFIIGTQGGAKTELNITS---LFAKRLTVQGIV 263 (274)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~---~~~~~~~i~g~~ 263 (274)
| ++ ++.+.+.+ ++ .++|++||++|.. .+ ..+++.++++|+++.+|........++... ++.+++++.|+.
T Consensus 232 -~-~~-~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 306 (366)
T 2cdc_A 232 -N-SS-NGYDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLV 306 (366)
T ss_dssp -E-CT-TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECC
T ss_pred -c-hH-HHHHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEec
Confidence 7 65 66667766 44 5799999999985 57 889999999999999998765435677777 888999999976
Q ss_pred cc
Q 024011 264 PL 265 (274)
Q Consensus 264 ~~ 265 (274)
..
T Consensus 307 ~~ 308 (366)
T 2cdc_A 307 NG 308 (366)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-41 Score=286.60 Aligned_cols=254 Identities=20% Similarity=0.302 Sum_probs=216.0
Q ss_pred CEEEEEcCC--CC--CcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCC
Q 024011 1 MKAIVITQP--GS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76 (274)
Q Consensus 1 m~a~~~~~~--~~--~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~ 76 (274)
||+++++++ +. ++.+++++.|.|+|++|||+|||.++|||+.|... .. +...|.++|||++|+|++. ++
T Consensus 8 mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~----~~~~p~~~g~e~~G~Vv~~--~v 80 (333)
T 1v3u_A 8 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK----RLKEGAVMMGQQVARVVES--KN 80 (333)
T ss_dssp EEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT----TCCTTSBCCCCEEEEEEEE--SC
T ss_pred ccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC----cCCCCcccccceEEEEEec--CC
Confidence 799999985 43 36799999999999999999999999999998732 21 2235778999999999995 67
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCC----CCHHh-hccCcchHHHHHHHHHhhcCCCCCCEEEEecCCch
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG----VSLKD-AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~----~~~~~-aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~ 151 (274)
++|++||||++. |+|+||+++|.+.++++|++ +++++ +++++++++|||+++.+..++++|+++||+|++|+
T Consensus 81 ~~~~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~gg 157 (333)
T 1v3u_A 81 SAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGA 157 (333)
T ss_dssp TTSCTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBH
T ss_pred CCCCCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCc
Confidence 889999999875 88999999999999999997 88887 47899999999999988889999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
+|++++++++..|++|+++++++++++.++++|++.++|..+ +++.+.+.+.+. .++|++|||+|...+..+++++++
T Consensus 158 iG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~l~~ 236 (333)
T 1v3u_A 158 VGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP-DGYDCYFDNVGGEFLNTVLSQMKD 236 (333)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC-CCCeEEEECCChHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999888877 778777777665 479999999998888899999999
Q ss_pred CCEEEEEecCCCCc------cccchhhHhhcceEEEEeecc
Q 024011 231 DGRLFIIGTQGGAK------TELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 231 ~g~~v~~g~~~~~~------~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+|+++.+|...+.. ...+...++.+++++.|+...
T Consensus 237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 277 (333)
T 1v3u_A 237 FGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY 277 (333)
T ss_dssp EEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGG
T ss_pred CCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehh
Confidence 99999999765421 123566788899999998753
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-40 Score=280.61 Aligned_cols=259 Identities=22% Similarity=0.319 Sum_probs=216.5
Q ss_pred CEEEEEcCC--CCCc--ceEEE--eecCCC-CCCCeEEEEEeeeecChhhhHhhcCCCCCC---CCCCCCCCCceeEEEE
Q 024011 1 MKAIVITQP--GSPE--VLQLQ--EVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~--~~~~--~~~~~--~~~~~~-~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~ 70 (274)
||+++.... +.+. .++++ +.+.|. |++|||+|||.++|+++.|. .+.|.+... ..+|.++|||++|++.
T Consensus 5 mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~ 83 (345)
T 2j3h_A 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGV 83 (345)
T ss_dssp EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEE
T ss_pred ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceE
Confidence 689988876 5565 68888 888886 89999999999999988875 444543221 1358899999999999
Q ss_pred E--ecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCC--eEECCC---CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEE
Q 024011 71 S--VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VLPVPS---GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESF 143 (274)
Q Consensus 71 ~--vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~~~p~---~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~v 143 (274)
+ +|+++++|++||||++. |+|+||++++.+. ++++|+ .++++ +++++++++|||+++.+..++++|+++
T Consensus 84 ~GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~v 159 (345)
T 2j3h_A 84 SRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETV 159 (345)
T ss_dssp EEEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEE
T ss_pred EEEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEE
Confidence 9 99999999999999876 7899999999876 999996 35555 577899999999999888899999999
Q ss_pred EEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhH
Q 024011 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYF 221 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 221 (274)
||+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++|..+ +++.+.+.+.++ .++|++||++|...+
T Consensus 160 lI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~ 238 (345)
T 2j3h_A 160 YVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP-NGIDIYFENVGGKML 238 (345)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT-TCEEEEEESSCHHHH
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC-CCCcEEEECCCHHHH
Confidence 99999999999999999999999999999999999998 799999888765 467777776654 579999999999878
Q ss_pred HHhhhccccCCEEEEEecCCCC-----ccccchhhHhhcceEEEEeecc
Q 024011 222 QRNLGSLNIDGRLFIIGTQGGA-----KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 222 ~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
..++++++++|+++.+|..... ...++...++.+++++.|+...
T Consensus 239 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 287 (345)
T 2j3h_A 239 DAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVS 287 (345)
T ss_dssp HHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGG
T ss_pred HHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeeh
Confidence 8999999999999999876431 2345666788899999987654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=314.31 Aligned_cols=231 Identities=30% Similarity=0.476 Sum_probs=211.1
Q ss_pred EEEcCCCCCcceEEEeecC--CCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 4 IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~--~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
+.+..+|.++.+++++.+. |+|++|||+|||.++|||++|++.+.|.++. |.++|||++|+|+++|+++++|++
T Consensus 213 l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~~----~~~lG~E~aG~V~~vG~~V~~~~v 288 (795)
T 3slk_A 213 LEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG----VASLGSEGAGVVVETGPGVTGLAP 288 (795)
T ss_dssp EEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCSS----CCCSCCCEEEEEEEECSSCCSSCT
T ss_pred EecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCCC----CccccceeEEEEEEeCCCCCcCCC
Confidence 4566778888899988874 5789999999999999999999999987653 557999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||||+++. +|+|++|++++.+.++++|+++++++|++++++++|+|+++.+.+++++|++|||+|++|++|++++|+++
T Consensus 289 GDrV~~~~-~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk 367 (795)
T 3slk_A 289 GDRVMGMI-PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLAR 367 (795)
T ss_dssp TCEEEECC-SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHH
T ss_pred CCEEEEEe-cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 99999884 69999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..|++|+++++++ +.+.++ +|++++++++..++.+.+.+.++++|+|+|||+.|+..+..++++++++|+++.+|...
T Consensus 368 ~~Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~ 445 (795)
T 3slk_A 368 HLGAEVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTD 445 (795)
T ss_dssp HTTCCEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTT
T ss_pred HcCCEEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEecccc
Confidence 9999999998665 555554 89999999999999999999999999999999999988999999999999999998754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=272.99 Aligned_cols=248 Identities=29% Similarity=0.403 Sum_probs=210.7
Q ss_pred cCCCCCcceEEEeecCCC-CC--CCeEEEEEeeeecChhhhHhhcCCCCCC------CCCCCCCCCceeEEEEEecCCCC
Q 024011 7 TQPGSPEVLQLQEVEDPQ-IK--DDEVLIKVEATALNRADTLQRKGSYPPP------KGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~-~~--~~ev~V~v~~~~i~~~D~~~~~g~~~~~------~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
..++..+.+.+.+.+... +. ++||+|+|.++|+|++|++...|.++.. ...|.++|+|++|+|
T Consensus 1536 ~~~g~l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V-------- 1607 (2512)
T 2vz8_A 1536 LSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD-------- 1607 (2512)
T ss_dssp SSTTCTTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE--------
T ss_pred cCCCCcCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE--------
Confidence 345555667787766543 33 7999999999999999999999876531 123568999999987
Q ss_pred CCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
.+||+|+++..+|+|++|+++|.+.++++|+++++++||+++++++|+|+++.+.+++++|++|||+|++|++|++++
T Consensus 1608 --~vGdrV~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAi 1685 (2512)
T 2vz8_A 1608 --ASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAI 1685 (2512)
T ss_dssp --TTSCCEEEECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHH
T ss_pred --ccCCEEEEeecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHH
Confidence 279999999878999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 233 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~ 233 (274)
|+|+..|++|+++++++++.+.+++ ++++++++.++.++.+.+.+.++++|+|+|||+.++..+..++++++++|+
T Consensus 1686 qlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr 1765 (2512)
T 2vz8_A 1686 AIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGR 1765 (2512)
T ss_dssp HHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEE
T ss_pred HHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcE
Confidence 9999999999999999999988885 788999999888899999988888899999999998889999999999999
Q ss_pred EEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 234 LFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 234 ~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.+|.............++.+++++.|+..
T Consensus 1766 ~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l 1796 (2512)
T 2vz8_A 1766 FLEIGKFDLSNNHALGMAVFLKNVTFHGILL 1796 (2512)
T ss_dssp EEECCCHHHHTTCEEEGGGGGGCCEEEECCG
T ss_pred EEEeecccccccCcccccccccCCcEEEeeH
Confidence 9999854321111222345677888888754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-23 Score=161.58 Aligned_cols=159 Identities=30% Similarity=0.522 Sum_probs=125.8
Q ss_pred CCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 024011 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (274)
Q Consensus 103 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (274)
+.++++|+++++++|+++++++.|+|+++.+..++++|++++|+|++|++|.+++++++..|++|+++++++++++.+++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 46789999999999999999999999999777899999999999999999999999999999999999999999888889
Q ss_pred cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEE
Q 024011 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQG 261 (274)
Q Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g 261 (274)
+|.+.++|.++.++.+.+.+.+.+.++|++|||+|...+..+++.++++|+++.+|..... ...++.. .+.+++++.+
T Consensus 82 ~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~ 160 (198)
T 1pqw_A 82 LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASFSV 160 (198)
T ss_dssp TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEEEE
T ss_pred cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEEEE
Confidence 9998888888778888888777666799999999987888999999999999999876521 1223332 3457788776
Q ss_pred e
Q 024011 262 I 262 (274)
Q Consensus 262 ~ 262 (274)
+
T Consensus 161 ~ 161 (198)
T 1pqw_A 161 V 161 (198)
T ss_dssp C
T ss_pred E
Confidence 4
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.5e-10 Score=92.85 Aligned_cols=103 Identities=24% Similarity=0.403 Sum_probs=74.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEE---EeCCCCcH----HHHHHHHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVC---INYKTEDF----VARVKEETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~----~~~~~~~~~~~~~ 209 (274)
-.||++||+|+++|||.++++.+.+.|++|++++|++++++.+ ++++.... .|..+.+. .+.+.+.++ ++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG--RI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--CE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CC
Confidence 3699999999999999999999999999999999999987655 45664322 24444333 333444444 49
Q ss_pred cEEEECCChhh-----------H---------------HHhhhccccCCEEEEEecCCC
Q 024011 210 DVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 210 d~vi~~~g~~~-----------~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (274)
|+++||+|... + ..++..|+++|+++.+++..+
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~ 163 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG 163 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence 99999998520 1 234556788899988876553
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=99.01 E-value=8.3e-10 Score=94.68 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=88.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE--EEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+++++|+|+ |++|.++++.++..|++|+++++++++++.+++++... ..+.+..++.+.+ . ++|+|||+++
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~DvVI~~~~ 239 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV----A--EADLLIGAVL 239 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH----H--TCSEEEECCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHH----c--CCCEEEECCC
Confidence 489999998 99999999999999999999999999998887765432 3333322332222 2 4899999997
Q ss_pred hhh-------HHHhhhccccCCEEEEEecCCCC------ccccchhhHhhcceEEEEeecc
Q 024011 218 ASY-------FQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 218 ~~~-------~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
... ....++.++++|++++++...+. ...++...++.+++++.+..+.
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~l 300 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNM 300 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCG
T ss_pred cCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCc
Confidence 643 45678889999999999876543 2345555566788888876543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.4e-10 Score=91.14 Aligned_cols=80 Identities=21% Similarity=0.262 Sum_probs=59.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC-CEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
+-.||++||+|+++|||.++++.+.+.|++|++++|++++++....... ....|..+.+..+++.+..+ ++|+++||
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g--~iDiLVNN 85 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALP--RLDVLVNN 85 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEEC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcC--CCCEEEEC
Confidence 3469999999999999999999999999999999999887653321111 11235555555566666654 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 86 AGi 88 (242)
T 4b79_A 86 AGI 88 (242)
T ss_dssp CCC
T ss_pred CCC
Confidence 984
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.97 E-value=3.2e-09 Score=86.29 Aligned_cols=78 Identities=22% Similarity=0.274 Sum_probs=58.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcH----HHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDF----VARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~----~~~~~~~~~~~ 207 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+ ++.|.... .|..+.+. .+++.+.++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G-- 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS-- 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 589999999999999999999999999999999999877544 34565433 24444333 333444454
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+++||+|.
T Consensus 84 ~iDiLVNNAGi 94 (254)
T 4fn4_A 84 RIDVLCNNAGI 94 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 49999999983
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.1e-09 Score=86.91 Aligned_cols=77 Identities=19% Similarity=0.174 Sum_probs=58.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE---EeCCCCc----HHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC---INYKTED----FVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~d~v 212 (274)
+|++||+|+++|||.++++.+.+.|++|+++++++++++.+.+.+.... .|..+.+ +.+.+.+.++ ++|++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g--~iDiL 79 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQ--RIDVL 79 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCCEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 4789999999999999999999999999999999998877765554433 2444433 2333344444 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
+||+|.
T Consensus 80 VNNAG~ 85 (247)
T 3ged_A 80 VNNACR 85 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.7e-09 Score=85.90 Aligned_cols=78 Identities=23% Similarity=0.274 Sum_probs=57.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEEE---eCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI---NYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~---~~~~~~~~~~~----~~~~~~~ 207 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.. ++.+..... |..+.+..+.+ .+.. .
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG--I 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT--C
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC--C
Confidence 589999999999999999999999999999999998876543 345554432 44443333333 3333 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+++||+|.
T Consensus 86 ~iDiLVNNAG~ 96 (255)
T 4g81_D 86 HVDILINNAGI 96 (255)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 49999999994
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-09 Score=86.82 Aligned_cols=77 Identities=19% Similarity=0.319 Sum_probs=56.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHHHHcCCCEEE---eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCI---NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.||++||+|+++|||.++++.+.+.|++|++++|+++ ..+.+++.+..... |..+.+. +.+.....++|+++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKDSFTDAGFDILV 84 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTTSSTTTCCCEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHHHHHhCCCCEEE
Confidence 5999999999999999999999999999999998753 35666677765432 3333222 22222234699999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
||+|.
T Consensus 85 NNAGi 89 (247)
T 4hp8_A 85 NNAGI 89 (247)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99994
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.6e-08 Score=86.87 Aligned_cols=121 Identities=17% Similarity=0.236 Sum_probs=80.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++++|+|+ |++|..+++.++..|++|+++++++++++.+++ ++.....+....+ .+.+... ++|+||++++
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~---~l~~~~~--~~DvVi~~~g 238 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEA---NIKKSVQ--HADLLIGAVL 238 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHH---HHHHHHH--HCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHH---HHHHHHh--CCCEEEECCC
Confidence 3689999998 999999999999999999999999998887765 6766433332222 2222222 4899999998
Q ss_pred hhh-------HHHhhhccccCCEEEEEecCCCC------ccccchhhHhhcceEEEEeecc
Q 024011 218 ASY-------FQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 218 ~~~-------~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
... ....++.|+++|+++.++...+. ...++...+..+++++.+..+.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~l 299 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANM 299 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCS
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCc
Confidence 642 46778889999999999876542 1233333455677887776543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.6e-08 Score=82.57 Aligned_cols=78 Identities=12% Similarity=0.217 Sum_probs=56.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC--CEE--EeCCCCc----HHHHHHHHh
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--DVC--INYKTED----FVARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~~~--~~~~~~~----~~~~~~~~~ 204 (274)
.||++||+|++| |||.++++.+.+.|++|++++|+++.++.+. +++. ... .|..+.+ ..+.+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 589999999865 9999999999999999999999988766554 3332 222 2444432 233344445
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|+++||+|.
T Consensus 85 G--~iD~lvnnAg~ 96 (256)
T 4fs3_A 85 G--NIDGVYHSIAF 96 (256)
T ss_dssp C--CCSEEEECCCC
T ss_pred C--CCCEEEecccc
Confidence 4 49999999983
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.84 E-value=2.2e-11 Score=105.97 Aligned_cols=171 Identities=16% Similarity=0.223 Sum_probs=123.2
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEEEE---------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 60 YPGLECSGTILSVGKNVSRWKVGDQVCA---------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~---------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
..|++.++.|..+|++++.+.+|+.++. ...+|++++|+..+...++.+|+.++.+.++. ..+..++|.+
T Consensus 76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~a 154 (404)
T 1gpj_A 76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAA 154 (404)
T ss_dssp EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHH
T ss_pred ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHH
Confidence 4689999999999999999999998621 11247788888888888888888887776553 4556677776
Q ss_pred HHhhc---CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH-HHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 131 VFMTS---HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 131 l~~~~---~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
+.... .-.+|++++|+|+ |++|.++++.++..|+ +|++++|+.++. +.++++|.+. ++. .++.+. .
T Consensus 155 v~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~-~~~--~~l~~~----l- 225 (404)
T 1gpj_A 155 VELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VRF--DELVDH----L- 225 (404)
T ss_dssp HHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCG--GGHHHH----H-
T ss_pred HHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce-ecH--HhHHHH----h-
Confidence 63322 1257999999997 9999999999999999 999999999887 5566778652 222 233222 2
Q ss_pred CCCccEEEECCChhh-H--HHhhhc--c--ccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGASY-F--QRNLGS--L--NIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~-~--~~~~~~--l--~~~g~~v~~g~~~ 241 (274)
.++|+||++++... . ...++. + ++++.+++++...
T Consensus 226 -~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 226 -ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp -HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred -cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 24899999998643 1 134444 3 4567777777654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.6e-08 Score=82.50 Aligned_cols=102 Identities=21% Similarity=0.317 Sum_probs=71.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+..+ .+.+..+ ++|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLG--AID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS--SEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence 5899999999999999999999999999999999998876654 3443322 2444433222 3333333 499
Q ss_pred EEEECCChhh--------------------------HHHhhhccccCCEEEEEecCCC
Q 024011 211 VILDCMGASY--------------------------FQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 211 ~vi~~~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
++|+|+|... ...++..++++|+++.+++...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~ 142 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD 142 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence 9999998420 1233445666789999877653
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=2.8e-08 Score=85.83 Aligned_cols=124 Identities=15% Similarity=0.177 Sum_probs=89.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCC-------------------CcHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT-------------------EDFVA 198 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~-------------------~~~~~ 198 (274)
++++|+|+|+ |.+|+++++.++.+|++|++++++.++++.++++|++.+ ++... ....+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 5899999997 999999999999999999999999999888888887654 12211 00122
Q ss_pred HHHHHhCCCCccEEEECC---Chhh----HHHhhhccccCCEEEEEecCCCCccc--cchhhHhhcceEEEEeecc
Q 024011 199 RVKEETGGKGVDVILDCM---GASY----FQRNLGSLNIDGRLFIIGTQGGAKTE--LNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~---g~~~----~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~i~g~~~~ 265 (274)
.+.+... +.|+||+++ |... ....++.|++++.++.++...+..+. .+...+..+++++.|+.+.
T Consensus 250 ~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~ 323 (384)
T 1l7d_A 250 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV 323 (384)
T ss_dssp HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG
T ss_pred HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC
Confidence 2444443 489999999 5321 36778899999999999864432222 2444456788999987764
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=4.7e-08 Score=84.18 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=85.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeC-CCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINY-KTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+|++++|+|+ |++|.++++.++..|++|+++++++++++.+++ ++.....+. +..++ .+... +.|+||+++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l----~~~l~--~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYEL----EGAVK--RADLVIGAV 239 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHH----HHHHH--HCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHH----HHHHc--CCCEEEECC
Confidence 5799999998 999999999999999999999999999888776 676532222 22222 22222 389999998
Q ss_pred Chhh-------HHHhhhccccCCEEEEEecCCC------CccccchhhHhhcceEEEEeecc
Q 024011 217 GASY-------FQRNLGSLNIDGRLFIIGTQGG------AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 217 g~~~-------~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+.+. ....++.|++++.++.++...+ ....++...+..+++++.++...
T Consensus 240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl 301 (377)
T 2vhw_A 240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANM 301 (377)
T ss_dssp CCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTG
T ss_pred CcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCc
Confidence 7543 4677889999999999986543 22333444455567776665543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.73 E-value=5.5e-08 Score=79.79 Aligned_cols=78 Identities=29% Similarity=0.437 Sum_probs=57.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+..+ .+.+..+ ++|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD 103 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREME--GID 103 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHT--SCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcC--CCC
Confidence 5899999999999999999999999999999999988876553 4554433 2333333222 2333333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 104 ~lvnnAg~ 111 (266)
T 3grp_A 104 ILVNNAGI 111 (266)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.70 E-value=4.1e-08 Score=78.90 Aligned_cols=100 Identities=15% Similarity=0.205 Sum_probs=70.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.++++||+|++|++|..+++.+.+.|++|++++|++++.+.+.+.+....+..+-. +.+.+..+ ++|+||+++|.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~--~~D~vi~~ag~ 94 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE---EDFSHAFA--SIDAVVFAAGS 94 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT---SCCGGGGT--TCSEEEECCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH---HHHHHHHc--CCCEEEECCCC
Confidence 47899999999999999999999999999999999999888776665133322221 22333443 59999999985
Q ss_pred hh--------------HHHhhhccc--cCCEEEEEecCCCC
Q 024011 219 SY--------------FQRNLGSLN--IDGRLFIIGTQGGA 243 (274)
Q Consensus 219 ~~--------------~~~~~~~l~--~~g~~v~~g~~~~~ 243 (274)
.. ....++.++ ..++++.++..+..
T Consensus 95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 95 GPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV 135 (236)
T ss_dssp CTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC
Confidence 21 112333332 23789999886643
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-08 Score=80.72 Aligned_cols=88 Identities=19% Similarity=0.224 Sum_probs=65.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.+ .|..+.+..+.+.+..+ ++|++|+|+|.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g--~id~lv~nAg~ 69 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDEKSVYHYFETIG--AFDHLIVTAGS 69 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCHHHHHHHHHHHC--SEEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCHHHHHHHHHHhC--CCCEEEECCCC
Confidence 4789999999999999999999999999999998765 34445444445555443 49999999984
Q ss_pred h-h--------------------------HHHhhhccccCCEEEEEecCC
Q 024011 219 S-Y--------------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 219 ~-~--------------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
. . ...++..++++|+++.++...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~ 119 (223)
T 3uce_A 70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML 119 (223)
T ss_dssp CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence 2 0 123344566678999887654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.4e-07 Score=77.48 Aligned_cols=102 Identities=20% Similarity=0.274 Sum_probs=68.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHH----HHHcCCCEE---EeCCCCcHH----HHHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGADVC---INYKTEDFV----ARVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~----~~~~g~~~~---~~~~~~~~~----~~~~~~~~ 205 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++++ .+..+. +++.+.... .|..+.+.. +.+.+..+
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999998764 343332 334454433 243333222 23333343
Q ss_pred CCCccEEEECCChhh--------------------------HHHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGASY--------------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|++|+|+|... ...++..+.++|+++.++...
T Consensus 96 --~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 96 --HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp --CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred --CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 4999999998410 123445577789999998765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.1e-07 Score=78.25 Aligned_cols=79 Identities=24% Similarity=0.389 Sum_probs=56.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EEE--eCCCCcHH----HHHHHHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~ 209 (274)
..++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +++.. ..+ |..+.+.. +.+.+..+ ++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~i 103 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG--RV 103 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS--CC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CC
Confidence 35799999999999999999999999999999999988876554 44422 222 44443322 23333333 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 104 D~lVnnAg~ 112 (272)
T 4dyv_A 104 DVLFNNAGT 112 (272)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-07 Score=77.88 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=69.0
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.|+++||+|++| ++|.++++.+.+.|++|++++|+++..+.++ +.+....+ |..+.+..+ .+.+..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG- 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 589999999986 9999999999999999999999876544332 33443333 444433333 3333333
Q ss_pred CCccEEEECCChhh---------------H---------------HHhhhccccCCEEEEEecCCC
Q 024011 207 KGVDVILDCMGASY---------------F---------------QRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 207 ~~~d~vi~~~g~~~---------------~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (274)
++|++|+|+|... + ..++..+.++|+|+.++....
T Consensus 108 -~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~ 172 (296)
T 3k31_A 108 -SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA 172 (296)
T ss_dssp -CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred -CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence 4999999998421 0 123345666899999887543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-07 Score=76.44 Aligned_cols=79 Identities=29% Similarity=0.398 Sum_probs=56.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
-.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 105 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG- 105 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC-
Confidence 35799999999999999999999999999999999988765543 3343322 2444333222 2333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 106 -~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 -RCDVLVNNAGV 116 (262)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 49999999985
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=2.2e-07 Score=77.22 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=67.9
Q ss_pred CCCCEEEEecCCch--HHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCCcHHH----HHHHHhC
Q 024011 138 SPGESFLVHGGSSG--IGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFVA----RVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~--iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~----~~~~~~~ 205 (274)
-.|+++||+|++|+ +|.++++.+.+.|++|++++|+++..+.++ +.+....+ |..+.+..+ .+.+..+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45899999999855 999999999999999999999865433332 33432333 444433333 3333333
Q ss_pred CCCccEEEECCChhh---------------H---------------HHhhhccccCCEEEEEecCCC
Q 024011 206 GKGVDVILDCMGASY---------------F---------------QRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~---------------~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (274)
++|++|+|+|... + ..++..++++|+|+.++....
T Consensus 109 --~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~ 173 (293)
T 3grk_A 109 --KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA 173 (293)
T ss_dssp --CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred --CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence 4999999998421 0 123344667899999987553
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.2e-07 Score=77.70 Aligned_cols=102 Identities=17% Similarity=0.239 Sum_probs=67.9
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC--CEE--EeCCCCcHHHH----HHHHh
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--DVC--INYKTEDFVAR----VKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~~~--~~~~~~~~~~~----~~~~~ 204 (274)
.|+++||+|++ +|+|.++++.+.+.|++|++++|+++..+.++ +.+. ... .|..+.+..+. +.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999999 55999999999999999999998876544433 2332 222 34444433333 33333
Q ss_pred CCCCccEEEECCChhh------------------------------HHHhhhccccCCEEEEEecCCC
Q 024011 205 GGKGVDVILDCMGASY------------------------------FQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~------------------------------~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
+ ++|++|+|+|... ...++..++++|+++.++....
T Consensus 86 g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 151 (266)
T 3oig_A 86 G--VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG 151 (266)
T ss_dssp S--CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred C--CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence 3 4999999998421 1123445667899999987653
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.7e-07 Score=76.72 Aligned_cols=78 Identities=19% Similarity=0.335 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh---hHHHH----HHcCCCEE---EeCCCCcHH----HHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC----KDLGADVC---INYKTEDFV----ARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~----~~~g~~~~---~~~~~~~~~----~~~~~~~ 204 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.. +++.+ ++.+.... .|..+.+.. +.+.+..
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999999876543 33322 22343322 244443322 3333333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 90 g--~iD~lvnnAg~ 101 (262)
T 3ksu_A 90 G--KVDIAINTVGK 101 (262)
T ss_dssp C--SEEEEEECCCC
T ss_pred C--CCCEEEECCCC
Confidence 3 49999999993
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.59 E-value=3.5e-07 Score=76.10 Aligned_cols=102 Identities=23% Similarity=0.324 Sum_probs=68.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHH----HHcCCCEEE---eCCCCcH----HHHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVC----KDLGADVCI---NYKTEDF----VARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~----~~~g~~~~~---~~~~~~~----~~~~~~~~~ 205 (274)
.|+++||+|+++++|.++++.+.+.|++|++++++.+ ..+.+ ++.+..... |..+.+. .+.+.+..+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999999987632 23322 344544332 3333322 233333343
Q ss_pred CCCccEEEECCChhh---------------------------HHHhhhccccCCEEEEEecCCC
Q 024011 206 GKGVDVILDCMGASY---------------------------FQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~---------------------------~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
++|++|+|+|... ...++..+.++|+|+.++....
T Consensus 128 --~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~ 189 (294)
T 3r3s_A 128 --GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_dssp --CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred --CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence 4999999998410 1133445667899999987653
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=2.6e-07 Score=80.14 Aligned_cols=124 Identities=19% Similarity=0.248 Sum_probs=86.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCC-------------CCcH----HHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYK-------------TEDF----VARV 200 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~-------------~~~~----~~~~ 200 (274)
++++|+|+|+ |.+|+.+++.++.+|++|++++++.++++.++++|+..+. +.. ..++ .+.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 4789999997 9999999999999999999999999998888888876431 110 0111 1123
Q ss_pred HHHhCCCCccEEEECCChh-----h--HHHhhhccccCCEEEEEecCCCCccccch--h-hHhhcceEEEEeecc
Q 024011 201 KEETGGKGVDVILDCMGAS-----Y--FQRNLGSLNIDGRLFIIGTQGGAKTELNI--T-SLFAKRLTVQGIVPL 265 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~~g~~-----~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~--~-~~~~~~~~i~g~~~~ 265 (274)
.+... +.|+||++++.+ . ....++.|++++.++.++...+..+.... . .+..+++++.|+.+.
T Consensus 250 ~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~ 322 (401)
T 1x13_A 250 AAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDL 322 (401)
T ss_dssp HHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCT
T ss_pred HHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCC
Confidence 33332 389999996321 1 35678899999999999865333333322 1 256788999987664
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.7e-07 Score=76.49 Aligned_cols=80 Identities=24% Similarity=0.361 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCCcHHHHHHH-HhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDFVARVKE-ETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~~~~~~~-~~~~~~ 208 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. ++ +.. ..+ |..+.+..+.+.+ .....+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999987765443 21 212 222 4444332322222 222223
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 86 id~lv~~Ag~ 95 (260)
T 2z1n_A 86 ADILVYSTGG 95 (260)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.54 E-value=9.5e-09 Score=84.38 Aligned_cols=74 Identities=23% Similarity=0.361 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcH----HHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF----VARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~d~vi~ 214 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.+..+....+ ..|..+.+. .+.+.+..+ ++|++|+
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~g--~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGLG--RLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHHS--CCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhcC--CCCEEEE
Confidence 589999999999999999999999999999999887654321111 123333222 223333343 4999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 101 nAg~ 104 (266)
T 3uxy_A 101 NAGV 104 (266)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9984
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-07 Score=77.61 Aligned_cols=75 Identities=13% Similarity=-0.009 Sum_probs=53.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---HcCCCEEEeCCCCc---HHHHHHHHhCCCCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADVCINYKTED---FVARVKEETGGKGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~~~~~~~~~---~~~~~~~~~~~~~~d~vi~ 214 (274)
+++||+|+++++|.++++.+.+.|++|++++|++++.+.+. +.+.....- +.++ ..+.+.+..+ ++|++|+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~g--~iD~lv~ 78 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAYG--QVDVLVS 78 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHHS--CCCEEEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHhC--CCCEEEE
Confidence 57999999999999999999999999999999887765443 234332211 3333 3334444443 4999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 79 nAg~ 82 (254)
T 1zmt_A 79 NDIF 82 (254)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 9984
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-06 Score=71.98 Aligned_cols=102 Identities=25% Similarity=0.384 Sum_probs=67.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HH----HHHHcCCCEE-E--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADVC-I--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~~~-~--~~~~~~~~----~~~~~~~~~ 206 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++ .+ .+++.+.... + |..+.+.. +.+.+..+
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g- 106 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG- 106 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 47899999999999999999999999999999988653 22 2334454332 2 33332222 22333333
Q ss_pred CCccEEEECCChhh-----------H---------------HHhhhccccCCEEEEEecCCC
Q 024011 207 KGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-----------~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (274)
++|++|+|+|... + ..++..|+..|+++.++...+
T Consensus 107 -~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 167 (283)
T 1g0o_A 107 -KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG 167 (283)
T ss_dssp -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred -CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence 4999999998420 1 223444556799999987543
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.1e-06 Score=77.82 Aligned_cols=163 Identities=18% Similarity=0.158 Sum_probs=107.3
Q ss_pred CceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhc--cCcchHHHHHHHHHhhc-CCCC
Q 024011 63 LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA--AFPEVACTVWSTVFMTS-HLSP 139 (274)
Q Consensus 63 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa--~l~~~~~~a~~~l~~~~-~~~~ 139 (274)
+++.|+|.+.|.++.++. .....|.+..... .+.+ +..+.. .+.....+.|.++.+.. ...+
T Consensus 209 ~~i~GvveetgtGVd~l~------a~~~~Gilv~~~~-------~vn~--sVae~~~r~l~~~~~s~~~g~~r~~~~~l~ 273 (494)
T 3ce6_A 209 ESVKGVTEETTTGVLRLY------QFAAAGDLAFPAI-------NVND--SVTKSKFDNKYGTRHSLIDGINRGTDALIG 273 (494)
T ss_dssp HHCCCEEECSHHHHHHHH------HHHHTTCCCSCEE-------ECTT--SHHHHTTHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred cCeEEEEEEeCCChhHHH------HHHHcCCEEEecC-------CccH--HHHHHHHhhhhhhhhhhhHHHHhccCCCCC
Confidence 789999999998887651 1111232222111 1111 111111 11223345555654332 2678
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
|++++|.|. |.+|..+++.++..|++|+++++++++++.+++.|++. . ++. ++ . .+.|+|++++|..
T Consensus 274 GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~-----~l~-e~---l--~~aDvVi~atgt~ 340 (494)
T 3ce6_A 274 GKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-V-----TVE-EA---I--GDADIVVTATGNK 340 (494)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-C-----CHH-HH---G--GGCSEEEECSSSS
T ss_pred cCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-e-----cHH-HH---H--hCCCEEEECCCCH
Confidence 999999997 99999999999999999999999999888888888752 1 122 12 2 2489999999875
Q ss_pred h-HH-HhhhccccCCEEEEEecCCCCccccchhhHhhcc
Q 024011 220 Y-FQ-RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 256 (274)
Q Consensus 220 ~-~~-~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (274)
. +. ..++.|+++++++.+|... ..++...++.+.
T Consensus 341 ~~i~~~~l~~mk~ggilvnvG~~~---~eId~~aL~~~a 376 (494)
T 3ce6_A 341 DIIMLEHIKAMKDHAILGNIGHFD---NEIDMAGLERSG 376 (494)
T ss_dssp CSBCHHHHHHSCTTCEEEECSSSG---GGBCHHHHHHTT
T ss_pred HHHHHHHHHhcCCCcEEEEeCCCC---CccCHHHHHHhh
Confidence 4 44 6788999999999998753 235666665543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.3e-06 Score=69.31 Aligned_cols=99 Identities=8% Similarity=0.031 Sum_probs=67.9
Q ss_pred CEEEEecCCchHHHHHHHHHH-HcCCeEEEEecChh-hHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEE-KLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~~-~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|+|++|++|.++++.+. +.|++|++++|+++ +++.+...+.. ..+..+-.+ .+.+.+... ++|+||+++|
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~vv~~ag 82 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN-PGXLEQAVT--NAEVVFVGAM 82 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC-HHHHHHHHT--TCSEEEESCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC-HHHHHHHHc--CCCEEEEcCC
Confidence 579999999999999999998 89999999999988 76655423322 223222222 234444443 4899999998
Q ss_pred hhh--HHHhhhccccC--CEEEEEecCCC
Q 024011 218 ASY--FQRNLGSLNID--GRLFIIGTQGG 242 (274)
Q Consensus 218 ~~~--~~~~~~~l~~~--g~~v~~g~~~~ 242 (274)
... ...+++.++.. ++++.++....
T Consensus 83 ~~n~~~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 83 ESGSDMASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred CCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence 632 34445555433 68998887654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=2.4e-06 Score=69.75 Aligned_cols=78 Identities=26% Similarity=0.359 Sum_probs=56.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. ++.... . .|..+.+..+ .+.+..+ ++|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~iD 82 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG--RLH 82 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcC--CCc
Confidence 4789999999999999999999999999999999988876654 343222 2 2444333222 2333333 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~lvnnAg~ 90 (263)
T 2a4k_A 83 GVAHFAGV 90 (263)
T ss_dssp EEEEGGGG
T ss_pred EEEECCCC
Confidence 99999984
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-06 Score=70.80 Aligned_cols=101 Identities=18% Similarity=0.302 Sum_probs=67.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHH----HHHcCCCEE-E--eCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAV----CKDLGADVC-I--NYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~----~~~~g~~~~-~--~~~~~~~----~~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++ .+. +++.+.... + |..+.+. .+.+.+..+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 124 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG- 124 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 58999999999999999999999999999999988653 222 233444332 2 4443322 233333343
Q ss_pred CCccEEEECCChhh---------------------------HHHhhhccccCCEEEEEecCC
Q 024011 207 KGVDVILDCMGASY---------------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~~---------------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|++|+|+|... ...++..++++|+|+.++...
T Consensus 125 -~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~ 185 (291)
T 3ijr_A 125 -SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV 185 (291)
T ss_dssp -SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred -CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence 4999999987410 113344566788999987654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.46 E-value=2.1e-06 Score=71.60 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=55.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCC-CE-E--EeCCCC-cHHHHH----HHHh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGA-DV-C--INYKTE-DFVARV----KEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~-~~-~--~~~~~~-~~~~~~----~~~~ 204 (274)
..++++||+|++++||.++++.+.+.|++|++++|+.++.+.+ ++.+. .. . .|..+. +..+.+ .+..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999998876443 23332 21 2 344443 333333 3333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 90 g--~iD~lv~nAg~ 101 (311)
T 3o26_A 90 G--KLDILVNNAGV 101 (311)
T ss_dssp S--SCCEEEECCCC
T ss_pred C--CCCEEEECCcc
Confidence 3 49999999984
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.2e-06 Score=71.23 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=56.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH---HHHcCCC-EE--EeCCCCc----HHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV---CKDLGAD-VC--INYKTED----FVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~---~~~~g~~-~~--~~~~~~~----~~~~~~~~~~~~~ 208 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++.+. +.+.+.. .. .|..+.+ +.+++.+.++ +
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G--~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG--R 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC--C
Confidence 58999999999999999999999999999999998775433 3344432 22 2444433 3334444454 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+++||+|.
T Consensus 84 iDiLVNnAGi 93 (258)
T 4gkb_A 84 LDGLVNNAGV 93 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=3.5e-06 Score=69.54 Aligned_cols=101 Identities=20% Similarity=0.286 Sum_probs=68.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC------------hhhHHHH----HHcCCCEE---EeCCCCcHH--
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADVC---INYKTEDFV-- 197 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~~---~~~~~~~~~-- 197 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+ .++++.+ +..+.... .|..+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 58999999999999999999999999999999987 4444333 23444332 244443222
Q ss_pred --HHHHHHhCCCCccEEEECCChhh---------H---------------HHhhhccccCCEEEEEecCC
Q 024011 198 --ARVKEETGGKGVDVILDCMGASY---------F---------------QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 --~~~~~~~~~~~~d~vi~~~g~~~---------~---------------~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+.+..+ ++|++|+|+|... + ..++..+..+|+++.++...
T Consensus 89 ~~~~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 156 (287)
T 3pxx_A 89 ELANAVAEFG--KLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA 156 (287)
T ss_dssp HHHHHHHHHS--CCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred HHHHHHHHcC--CCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence 23333333 4999999998410 1 23344566789999987654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.4e-06 Score=70.52 Aligned_cols=78 Identities=22% Similarity=0.383 Sum_probs=57.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCCc----HHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++..... |..+.+ +.+.+.+..+ ++|
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id 82 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTG--GID 82 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHS--CCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC--CCC
Confidence 5799999999999999999999999999999999988776553 45544332 333332 2233333343 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~lv~nAg~ 90 (247)
T 3rwb_A 83 ILVNNASI 90 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999994
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.44 E-value=9.8e-08 Score=77.16 Aligned_cols=76 Identities=17% Similarity=0.167 Sum_probs=52.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHH-cCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.++++||+|+++++|.++++.+.+ .|++|++.+++++ ..+.+ .....|..+.+..+.+.+.....++|++|+|+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 578999999999999999998887 7889999988765 22111 01123444444444444444444699999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 79 g~ 80 (244)
T 4e4y_A 79 GI 80 (244)
T ss_dssp CC
T ss_pred cc
Confidence 85
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.4e-06 Score=69.23 Aligned_cols=101 Identities=24% Similarity=0.390 Sum_probs=67.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHH----HHHcCCCEE-E--eCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAV----CKDLGADVC-I--NYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~----~~~~g~~~~-~--~~~~~~~----~~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++++. ++.+. +++.+.... + |..+.+. .+++.+..+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG- 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 589999999999999999999999999999986553 43333 334454432 2 4333322 223333343
Q ss_pred CCccEEEECCChh-----------h---------------HHHhhhccccCCEEEEEecCC
Q 024011 207 KGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|++|+|+|.. . ...++..++++|+++.++...
T Consensus 109 -~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~ 168 (271)
T 3v2g_A 109 -GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL 168 (271)
T ss_dssp -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred -CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence 499999999841 0 123344566789999997643
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.4e-06 Score=70.37 Aligned_cols=80 Identities=25% Similarity=0.375 Sum_probs=58.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCCcHHHHHHHHhCCCCccEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
..+++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. ++...... |..+.+..+.+.+.. .++|++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l 88 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL 88 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence 457899999999999999999999999999999999998876654 34433332 333333333333333 359999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 89 i~~Ag~ 94 (249)
T 3f9i_A 89 VCNAGI 94 (249)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 999984
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.2e-06 Score=72.68 Aligned_cols=78 Identities=18% Similarity=0.343 Sum_probs=58.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEE---EeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC---INYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|+.++.+.+.+ ++.... .|..+.+..+.+.+.. .++|++|+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~ 92 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN 92 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence 58999999999999999999999999999999999988776653 433222 2444433344444433 35899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 93 nAg~ 96 (291)
T 3rd5_A 93 NAGI 96 (291)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 9984
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.41 E-value=8.6e-07 Score=71.67 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=56.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++.+.++..... .|..+.+..+.+.+..+ ++|++|+|+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~id~lv~~A 82 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE--RLDVLFNVA 82 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhC--CCCEEEECC
Confidence 47899999999999999999999999999999999877655443322222 24444333344444443 499999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 83 g~ 84 (246)
T 2ag5_A 83 GF 84 (246)
T ss_dssp CC
T ss_pred cc
Confidence 84
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.8e-06 Score=69.94 Aligned_cols=78 Identities=19% Similarity=0.325 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----c----CCCEEE--eCCCCcH----HHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L----GADVCI--NYKTEDF----VARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~----g~~~~~--~~~~~~~----~~~~~~~~ 204 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+.+ . .....+ |..+.+. .+.+.+..
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999887655432 2 222222 4444322 22333334
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 86 g--~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 G--AVDILVNAAAM 97 (250)
T ss_dssp C--CEEEEEECCCC
T ss_pred C--CCCEEEECCCc
Confidence 3 49999999984
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.6e-06 Score=71.61 Aligned_cols=78 Identities=18% Similarity=0.405 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-----------HHHHHHcCCCEE---EeCCCCcHH----HHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----------LAVCKDLGADVC---INYKTEDFV----ARV 200 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~~---~~~~~~~~~----~~~ 200 (274)
.|+++||+|++++||.++++.+.+.|++|++++|++++ .+.+++.+.... .|..+.+.. +.+
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 58999999999999999999999999999999998763 233344554332 244443322 333
Q ss_pred HHHhCCCCccEEEECCCh
Q 024011 201 KEETGGKGVDVILDCMGA 218 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~~g~ 218 (274)
.+..+ ++|++|+|+|.
T Consensus 124 ~~~~g--~iDilVnnAG~ 139 (346)
T 3kvo_A 124 IKKFG--GIDILVNNASA 139 (346)
T ss_dssp HHHHS--CCCEEEECCCC
T ss_pred HHHcC--CCCEEEECCCC
Confidence 33343 49999999994
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.39 E-value=1.2e-06 Score=70.92 Aligned_cols=78 Identities=29% Similarity=0.471 Sum_probs=56.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC---EEEeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD---VCINYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.. ...|..+.+.. +.+.+..+ ++|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG--GVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC--CCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC--CCC
Confidence 5899999999999999999999999999999999988776654 23222 22344443322 33333343 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 86 ~lv~nAg~ 93 (248)
T 3op4_A 86 ILVNNAGI 93 (248)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.38 E-value=3.1e-06 Score=68.34 Aligned_cols=78 Identities=21% Similarity=0.324 Sum_probs=56.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCCcHH----HHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFV----ARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~----~~~~~~~~~~~~d~v 212 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++.+. +++...+ .|..+.+.. +.+.+..+ ++|++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~l 81 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLG--RLDGV 81 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHS--SCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 4789999999999999999999999999999999988776654 3442222 244433222 22333333 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 82 vn~Ag~ 87 (245)
T 1uls_A 82 VHYAGI 87 (245)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999983
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=4.9e-06 Score=66.91 Aligned_cols=79 Identities=20% Similarity=0.303 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCC-CCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGG-KGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~ 216 (274)
++++++|+|++|++|.++++.+.+.|++|++++|++++++.+. ++.....+..+..+. +.+.+.... .++|++|+++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTCCCCCEEEECC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-HHHHHHHHHcCCCCEEEECC
Confidence 5789999999999999999999999999999999988776554 332223333332222 223333222 3589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 85 g~ 86 (244)
T 3d3w_A 85 AV 86 (244)
T ss_dssp CC
T ss_pred cc
Confidence 84
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.37 E-value=3.4e-06 Score=68.93 Aligned_cols=78 Identities=22% Similarity=0.339 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc-----CCC-EE--EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VC--INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~--~~~~~~~~~~----~~~~~~~ 205 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++.+.+. ++ +.. .. .|..+.+..+ .+.+..+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999987765432 22 111 12 2444332222 2223333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 86 --~id~lv~~Ag~ 96 (267)
T 2gdz_A 86 --RLDILVNNAGV 96 (267)
T ss_dssp --CCCEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 48999999984
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.5e-06 Score=70.76 Aligned_cols=77 Identities=23% Similarity=0.423 Sum_probs=56.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+.+ .+.... .|..+.+.. +.+.+..+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-- 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG-- 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 47899999999999999999999999999999999988766542 232222 244443322 23333333
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
++|++|+|+|
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 4999999998
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.5e-06 Score=70.26 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=57.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+.. +.+.+..+ ++|
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD 103 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG--RVD 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence 5799999999999999999999999999999999988776554 4454332 244443322 23333333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999983
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.37 E-value=9.4e-07 Score=72.99 Aligned_cols=78 Identities=23% Similarity=0.313 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcC-CC-EE--EeCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-AD-VC--INYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g-~~-~~--~~~~~~~~----~~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+ .. .. .|..+.+. .+.+.+..+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA- 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 5899999999999999999999999999999999988765543 222 22 22 24444332 233333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 111 -~iD~lvnnAG~ 121 (281)
T 4dry_A 111 -RLDLLVNNAGS 121 (281)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=5.3e-07 Score=73.28 Aligned_cols=80 Identities=30% Similarity=0.351 Sum_probs=52.4
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhH----HHHHHcCCCE-EE--eCCCCcH----HHHHHHHh
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKL----AVCKDLGADV-CI--NYKTEDF----VARVKEET 204 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~----~~~~~~g~~~-~~--~~~~~~~----~~~~~~~~ 204 (274)
..+++++||+|+++++|.++++.+.+.|++|++++ ++.++. +.+++.+... .+ |..+.+. .+.+.+..
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 35689999999999999999999999999999987 444433 3333444332 22 3333222 23333333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 90 g--~id~lv~~Ag~ 101 (256)
T 3ezl_A 90 G--EIDVLVNNAGI 101 (256)
T ss_dssp C--CEEEEEECCCC
T ss_pred C--CCCEEEECCCC
Confidence 3 49999999984
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.3e-06 Score=70.07 Aligned_cols=77 Identities=23% Similarity=0.255 Sum_probs=55.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHH----HHHHHHhCCCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFV----ARVKEETGGKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~----~~~~~~~~~~~~d~ 211 (274)
++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++... . .|..+.+.. +.+.+..+ ++|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGG--LPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHC--SCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC--CCcE
Confidence 689999999999999999999999999999999998876654 232221 1 244433222 23333333 4999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 81 lvnnAg~ 87 (235)
T 3l6e_A 81 VLHCAGT 87 (235)
T ss_dssp EEEECCC
T ss_pred EEECCCC
Confidence 9999984
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.36 E-value=2e-06 Score=69.79 Aligned_cols=79 Identities=25% Similarity=0.276 Sum_probs=55.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-C-CCEE--EeC--CCCcHH----HHHHHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-G-ADVC--INY--KTEDFV----ARVKEE 203 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g-~~~~--~~~--~~~~~~----~~~~~~ 203 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +. + .... .|. .+.+.. +.+.+.
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 35899999999999999999999999999999999988765543 11 2 1222 243 222222 222333
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
.+ ++|++|+|+|.
T Consensus 90 ~g--~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YP--RLDGVLHNAGL 102 (252)
T ss_dssp CS--CCSEEEECCCC
T ss_pred CC--CCCEEEECCcc
Confidence 33 49999999984
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.36 E-value=3e-06 Score=69.38 Aligned_cols=102 Identities=24% Similarity=0.357 Sum_probs=66.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCEE---EeCCCCcHH----HHHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC---INYKTEDFV----ARVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~~---~~~~~~~~~----~~~~~~~~ 205 (274)
..++++||+|+++++|.++++.+.+.|++|+++. ++++..+.+ ++.+.... .|..+.+.. +.+.+..+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999875 444444333 34444332 244443322 23333343
Q ss_pred CCCccEEEECCChhh-----------H---------------HHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~-----------~---------------~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|++|+|+|... + ..++..++++|+++.++...
T Consensus 105 --~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~ 164 (267)
T 3u5t_A 105 --GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ 164 (267)
T ss_dssp --CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred --CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence 4999999998410 1 13344566678999987653
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=3.3e-06 Score=69.37 Aligned_cols=78 Identities=21% Similarity=0.239 Sum_probs=53.9
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChh---hHHHHHH-cCCCEE--EeCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVC--INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~-~g~~~~--~~~~~~~~~~~----~~~~~~~ 206 (274)
.+++++|+|++ +++|.++++.+.+.|++|++++|+++ .++.+.+ .+.... .|..+.+..+. +.+..+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG- 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 47899999998 99999999999999999999999875 3344433 332222 24444332222 223333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 -~id~lv~nAg~ 94 (275)
T 2pd4_A 84 -SLDFIVHSVAF 94 (275)
T ss_dssp -CEEEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 49999999983
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=2.3e-06 Score=69.83 Aligned_cols=78 Identities=29% Similarity=0.484 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcC-CC-EEE--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-AD-VCI--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g-~~-~~~--~~~~~~~~----~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+ .. ..+ |..+.+.. +.+.+..+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG- 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC-
Confidence 5799999999999999999999999999999999988765443 333 22 222 44443322 23333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 88 -~id~lvnnAg~ 98 (262)
T 3pk0_A 88 -GIDVVCANAGV 98 (262)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999983
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.4e-06 Score=70.47 Aligned_cols=78 Identities=26% Similarity=0.381 Sum_probs=57.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCc----HHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTED----FVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +++.... .|..+.+ +.+.+.+..+ ++|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD 81 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFG--KID 81 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC--CCC
Confidence 4789999999999999999999999999999999998876654 3443332 2433322 2233333343 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~lvnnAg~ 89 (281)
T 3zv4_A 82 TLIPNAGI 89 (281)
T ss_dssp EEECCCCC
T ss_pred EEEECCCc
Confidence 99999984
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=3e-06 Score=68.32 Aligned_cols=78 Identities=31% Similarity=0.436 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcC--CCEEE--eC--CCCc----HHHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG--ADVCI--NY--KTED----FVARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g--~~~~~--~~--~~~~----~~~~~~~~~ 204 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+ ....+ |. .+.+ +.+.+.+..
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~ 92 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF 92 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999988765543 333 12222 33 2222 223333333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 93 g--~id~lv~nAg~ 104 (247)
T 3i1j_A 93 G--RLDGLLHNASI 104 (247)
T ss_dssp S--CCSEEEECCCC
T ss_pred C--CCCEEEECCcc
Confidence 3 49999999984
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.36 E-value=2.2e-06 Score=70.21 Aligned_cols=78 Identities=23% Similarity=0.320 Sum_probs=56.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-CE--E--EeCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DV--C--INYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~~--~--~~~~~~~~~~~~~~~~~~~~~ 209 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++... +.+. .. . .|..+.+..+.+.+..+ ++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g--~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP--KV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC--CC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC--CC
Confidence 5799999999999999999999999999999999988764432 2221 11 1 24444444445554443 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 87 d~lv~nAg~ 95 (267)
T 3t4x_A 87 DILINNLGI 95 (267)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.36 E-value=2.5e-06 Score=69.76 Aligned_cols=78 Identities=21% Similarity=0.358 Sum_probs=56.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-- 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG-- 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence 4789999999999999999999999999999999988765543 3343322 2444433222 3333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.36 E-value=3.2e-06 Score=68.88 Aligned_cols=78 Identities=19% Similarity=0.332 Sum_probs=52.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHH----HHHcCCC-EEE--eCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAV----CKDLGAD-VCI--NYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~----~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|+++ .++++..+. +++.+.. ..+ |..+.+. .+++.+..+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG- 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC-
Confidence 57999999999999999999999999999998 445444333 2333432 222 4444332 233333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 86 -~id~lv~nAg~ 96 (259)
T 3edm_A 86 -EIHGLVHVAGG 96 (259)
T ss_dssp -SEEEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 49999999973
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.36 E-value=5.4e-06 Score=68.19 Aligned_cols=78 Identities=22% Similarity=0.303 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-CE--E--EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DV--C--INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~~--~--~~~~~~~~~~----~~~~~~~ 205 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++++.+. +.+. .. . .|..+.+..+ .+.+..+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999999987765442 3332 11 2 2443333222 2223333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|+||+|+|.
T Consensus 111 --~iD~vi~~Ag~ 121 (279)
T 1xg5_A 111 --GVDICINNAGL 121 (279)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 49999999983
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.35 E-value=2.4e-06 Score=69.36 Aligned_cols=80 Identities=23% Similarity=0.265 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHHHh-CCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKEET-GGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~-~~~~~d 210 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+.+.. ...++|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id 85 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE 85 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence 5789999999999999999999999999999999988765443 3343322 2444433222222211 113599
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 86 ~lv~nAg~ 93 (252)
T 3h7a_A 86 VTIFNVGA 93 (252)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999994
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3e-06 Score=67.82 Aligned_cols=78 Identities=24% Similarity=0.314 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-----HcCCCEE-E--eCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADVC-I--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~g~~~~-~--~~~~~~~~~~----~~~~~~~ 206 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. ..+.... + |..+.+..+. +.+..+
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG- 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC-
Confidence 3689999999999999999999999999999999988765442 2343332 2 3333322222 222232
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 80 -~id~li~~Ag~ 90 (235)
T 3l77_A 80 -DVDVVVANAGL 90 (235)
T ss_dssp -SCSEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 49999999984
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.34 E-value=9.5e-07 Score=71.66 Aligned_cols=103 Identities=24% Similarity=0.353 Sum_probs=64.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHH----HHcCCCEE-E--eCCCCcHHH----HHHHHh--
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADVC-I--NYKTEDFVA----RVKEET-- 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~~-~--~~~~~~~~~----~~~~~~-- 204 (274)
.+++++|+|+++++|.++++.+.+.|++|+++ .++.++.+.. ++.+.... + |..+.+..+ .+.+..
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 57999999999999999999999999999886 5555544332 33343222 2 333322222 222221
Q ss_pred --CCCCccEEEECCChhh-----------H---------------HHhhhccccCCEEEEEecCC
Q 024011 205 --GGKGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 205 --~~~~~d~vi~~~g~~~-----------~---------------~~~~~~l~~~g~~v~~g~~~ 241 (274)
+...+|++|+|+|... + ..++..++++|+++.++...
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~ 150 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 150 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence 1234999999998410 1 12233455678999988764
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.34 E-value=6.8e-06 Score=58.03 Aligned_cols=94 Identities=18% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+ |.+|..+++.+...| .+|++++|++++.+.+...+.... ..+..+ .+.+.+... ++|+||++++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~-~~~~~~~~~--~~d~vi~~~~ 78 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATK-QVDAKD-EAGLAKALG--GFDAVISAAP 78 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEE-ECCTTC-HHHHHHHTT--TCSEEEECSC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEE-EecCCC-HHHHHHHHc--CCCEEEECCC
Confidence 3578999999 999999999999999 899999999998888776554433 222222 234444443 5999999998
Q ss_pred hhhHHHhhhcc-ccCCEEEEE
Q 024011 218 ASYFQRNLGSL-NIDGRLFII 237 (274)
Q Consensus 218 ~~~~~~~~~~l-~~~g~~v~~ 237 (274)
........+.. +.+-+++.+
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 79 FFLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp GGGHHHHHHHHHHTTCEEECC
T ss_pred chhhHHHHHHHHHhCCCEEEe
Confidence 65544444444 444455544
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.4e-06 Score=69.41 Aligned_cols=78 Identities=28% Similarity=0.422 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC-EEE--eCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~ 207 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.. ..+ |..+.+.. +++.+..+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g-- 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG-- 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence 5799999999999999999999999999999999988765443 33332 222 44443322 23333343
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-06 Score=70.73 Aligned_cols=78 Identities=28% Similarity=0.498 Sum_probs=57.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++++.+. + .+.... .|..+.+..+ .+.+..+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 97 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG- 97 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence 5799999999999999999999999999999999988765443 2 343322 3444444333 3333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 98 -~id~lv~nAg~ 108 (266)
T 4egf_A 98 -GLDVLVNNAGI 108 (266)
T ss_dssp -SCSEEEEECCC
T ss_pred -CCCEEEECCCc
Confidence 49999999984
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.34 E-value=1.8e-06 Score=70.77 Aligned_cols=80 Identities=25% Similarity=0.399 Sum_probs=55.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecChhh-HHHHH-HcCCC--E-EEeCCCCcHHH----HHHHHhC-C
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCK-DLGAD--V-CINYKTEDFVA----RVKEETG-G 206 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~-~~g~~--~-~~~~~~~~~~~----~~~~~~~-~ 206 (274)
.+++++|+|+ ++++|.++++.+.+.|++|++++|+.++ ++.+. +++.. . ..|..+.+..+ .+.+..+ .
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 8999999999999999999999998765 34443 33322 1 23444433232 2333333 1
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 86 ~~iD~lv~nAg~ 97 (269)
T 2h7i_A 86 NKLDGVVHSIGF 97 (269)
T ss_dssp CCEEEEEECCCC
T ss_pred CCceEEEECCcc
Confidence 159999999983
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.4e-06 Score=68.67 Aligned_cols=78 Identities=19% Similarity=0.286 Sum_probs=57.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+.. +.+.+..+ ++|
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id 85 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG--KVD 85 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC--CCC
Confidence 4789999999999999999999999999999999998876654 4444322 243333222 23333333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 86 ~li~~Ag~ 93 (261)
T 3n74_A 86 ILVNNAGI 93 (261)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999984
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.3e-06 Score=70.11 Aligned_cols=78 Identities=27% Similarity=0.391 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcC-CC-EE--EeCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-AD-VC--INYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g-~~-~~--~~~~~~~~----~~~~~~~~~~ 206 (274)
.++++||+|++++||.++++.+.+.|++|++++|++++++.+. +.+ .. .. .|..+.+. .+.+.+..+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG- 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC-
Confidence 5899999999999999999999999999999999988765543 223 12 22 24444322 233334444
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 119 -~iD~lvnnAg~ 129 (293)
T 3rih_A 119 -ALDVVCANAGI 129 (293)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.33 E-value=2e-06 Score=70.04 Aligned_cols=78 Identities=21% Similarity=0.369 Sum_probs=56.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +++.... .|..+.+..+ .+.+..+ ++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id 84 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG--GLD 84 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS--SCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC--CCC
Confidence 5799999999999999999999999999999999988776553 4444322 2444433222 2333333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 85 ~lv~~Ag~ 92 (259)
T 4e6p_A 85 ILVNNAAL 92 (259)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999984
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.3e-06 Score=70.18 Aligned_cols=79 Identities=23% Similarity=0.241 Sum_probs=56.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCCcHH----HHHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~----~~~~~~~~~ 206 (274)
-.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.. .. .|..+.+.. +.+.+..+
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 104 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG- 104 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC-
Confidence 35899999999999999999999999999999999988765443 33322 22 344443322 23333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 105 -~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 -ALNVLVNNAGI 115 (270)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999983
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=3.9e-06 Score=67.95 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=54.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
...++++||+|++|++|.++++.+.+.|++|++++|+++..+ +++....+ .+-.+..+.+.+... ++|++|+|+
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~-~D~~~~~~~~~~~~~--~iD~lv~~A 89 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGHRYVV-CDLRKDLDLLFEKVK--EVDILVLNA 89 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCSEEEE-CCTTTCHHHHHHHSC--CCSEEEECC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH---hhCCeEEE-eeHHHHHHHHHHHhc--CCCEEEECC
Confidence 346899999999999999999999999999999999875443 34432222 222222344444443 599999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 90 g~ 91 (249)
T 1o5i_A 90 GG 91 (249)
T ss_dssp CC
T ss_pred CC
Confidence 83
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.4e-06 Score=68.55 Aligned_cols=78 Identities=21% Similarity=0.256 Sum_probs=56.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+.... .|..+.+.. +.+.+..+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-- 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG-- 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence 5899999999999999999999999999999999988765443 3444332 244443322 23333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 89 ~id~lv~nAg~ 99 (256)
T 3gaf_A 89 KITVLVNNAGG 99 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=5.6e-06 Score=67.47 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=53.9
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChh---hHHHHHH-cCCCEEE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.++++||+|++ +++|.++++.+.+.|++|++++|+++ .++.+.+ .+....+ |..+.+..+ .+.+..+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG- 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 47899999998 99999999999999999999999875 3333332 3433333 444433222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 86 -~iD~lv~~Ag~ 96 (261)
T 2wyu_A 86 -GLDYLVHAIAF 96 (261)
T ss_dssp -SEEEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.3e-06 Score=68.98 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=54.2
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh---hhHHHHHH-cCCCEEE--eCCCCcHHHHHHHH-hCC-CC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCKD-LGADVCI--NYKTEDFVARVKEE-TGG-KG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~---~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~-~~~-~~ 208 (274)
.++++||+|++ +++|.++++.+.+.|++|++++|++ +.++.+.+ .+....+ |..+.+..+.+.+. ... .+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999998 9999999999999999999999887 33333332 2332233 44443333333332 111 25
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 88 iD~lv~~Ag~ 97 (265)
T 1qsg_A 88 FDGFVHSIGF 97 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999983
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.1e-06 Score=67.77 Aligned_cols=78 Identities=17% Similarity=0.268 Sum_probs=55.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHH-HHHHcCCCEE---EeCCCCcHHHHH----HHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA-VCKDLGADVC---INYKTEDFVARV----KEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~-~~~~~g~~~~---~~~~~~~~~~~~----~~~~~~~~~ 209 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++ ++++ .+++.+.... .|..+.+..+.+ .+..+ ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG--RC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--CC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcC--CC
Confidence 478999999999999999999999999999999987 6554 3445554322 244433322222 23333 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 84 d~lv~nAg~ 92 (249)
T 2ew8_A 84 DILVNNAGI 92 (249)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.3e-06 Score=73.60 Aligned_cols=125 Identities=17% Similarity=0.154 Sum_probs=86.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC-C-------CCcH------------HH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-K-------TEDF------------VA 198 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~-------~~~~------------~~ 198 (274)
++.+|+|+|+ |.+|..+++.++..|++|++.+++.++++.++++|.+.+... . ...+ .+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 5689999997 999999999999999999999999999999988887532110 0 0001 12
Q ss_pred HHHHHhCCCCccEEEECCChh-------hHHHhhhccccCCEEEEEecCCCCcccc--chhhHhhcceEEEEeeccc
Q 024011 199 RVKEETGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGTQGGAKTEL--NITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~~~~~~~~~--~~~~~~~~~~~i~g~~~~~ 266 (274)
.+.+... +.|+||.++..+ .....++.|+++..++.++...+..+.. +-..+..+++++.+..+.+
T Consensus 268 ~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nlP 342 (405)
T 4dio_A 268 LVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNVA 342 (405)
T ss_dssp HHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSGG
T ss_pred HHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCCC
Confidence 2333332 489999986422 2467889999999999998644333322 1122345678888887764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=4.3e-06 Score=68.28 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=57.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~ 206 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+.... .|..+.+.. +.+.+..+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 87 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG- 87 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 46899999999999999999999999999999999988765543 3343332 244443322 23333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 88 -~id~lv~nAg~ 98 (264)
T 3ucx_A 88 -RVDVVINNAFR 98 (264)
T ss_dssp -CCSEEEECCCS
T ss_pred -CCcEEEECCCC
Confidence 49999999974
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.1e-06 Score=67.69 Aligned_cols=78 Identities=29% Similarity=0.426 Sum_probs=55.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g-- 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG-- 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence 4789999999999999999999999999999999988765443 2343322 2444433222 2223333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=2.6e-06 Score=69.87 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=57.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++... . .|..+.+.. +.+.+..+ ++|
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id 87 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG--RLD 87 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC--CCC
Confidence 5799999999999999999999999999999999988776553 444322 2 244443322 33333343 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 88 ~lv~nAg~ 95 (271)
T 3tzq_B 88 IVDNNAAH 95 (271)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.32 E-value=4.1e-06 Score=69.21 Aligned_cols=78 Identities=21% Similarity=0.282 Sum_probs=56.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H---cCCCEE---EeCCCCcH----HHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADVC---INYKTEDF----VARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~~~---~~~~~~~~----~~~~~~~~~~~ 207 (274)
+++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. + .+.... .|..+.+. .+.+.+..+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-- 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG-- 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence 5789999999999999999999999999999999988776553 2 233322 24444322 233333343
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.9e-06 Score=70.02 Aligned_cols=78 Identities=29% Similarity=0.392 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H---cCCCEEE---eCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADVCI---NYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~~~~---~~~~~~~~~----~~~~~~~~~ 207 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. + .+..... |..+.+..+ .+.+..+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-- 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG-- 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence 5799999999999999999999999999999999988776554 2 2333222 333333222 3333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 85 ~iD~lvnnAg~ 95 (280)
T 3tox_A 85 GLDTAFNNAGA 95 (280)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=2.6e-06 Score=69.42 Aligned_cols=79 Identities=20% Similarity=0.321 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+ .+..+ .
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g 86 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH-G 86 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT-T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-C
Confidence 4789999999999999999999999999999999988765432 2343222 244433222222 22221 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 ~id~lv~~Ag~ 97 (260)
T 2ae2_A 87 KLNILVNNAGI 97 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.6e-06 Score=70.15 Aligned_cols=78 Identities=19% Similarity=0.319 Sum_probs=57.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EEE--eCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.. ..+ |..+.+.. +.+.+..+ ++|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG--GVD 105 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS--SCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence 5799999999999999999999999999999999988776553 44432 222 44443322 33333343 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 106 ~lvnnAg~ 113 (277)
T 3gvc_A 106 KLVANAGV 113 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=2.3e-06 Score=69.97 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCCC-E-E--EeCCCCcHH----HHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGAD-V-C--INYKTEDFV----ARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~~-~-~--~~~~~~~~~----~~~~~~~~ 205 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. + .+.. . . .|..+.+.. +.+.+..+
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999999999988765443 2 3322 2 2 244443322 33333343
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 --~id~lvnnAg~ 97 (265)
T 3lf2_A 87 --CASILVNNAGQ 97 (265)
T ss_dssp --SCSEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 49999999984
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=4.2e-06 Score=68.38 Aligned_cols=78 Identities=22% Similarity=0.234 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHH-cCCeEEEEecChhhHHHH----HHcCCC-EEE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.++++||+|++|++|.++++.+.+ .|++|++++|+.++.+.+ +..+.. ..+ |..+.+..+ .+.+..+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g- 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG- 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence 578999999999999999999998 999999999998765443 223322 222 433322222 2223332
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 82 -~id~li~~Ag~ 92 (276)
T 1wma_A 82 -GLDVLVNNAGI 92 (276)
T ss_dssp -SEEEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 49999999983
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.5e-06 Score=69.55 Aligned_cols=79 Identities=25% Similarity=0.339 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 107 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG- 107 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC-
Confidence 36899999999999999999999999999999999988765543 3343322 2444433222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 108 -~id~lvnnAg~ 118 (301)
T 3tjr_A 108 -GVDVVFSNAGI 118 (301)
T ss_dssp -SCSEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 49999999983
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.31 E-value=4e-06 Score=69.05 Aligned_cols=79 Identities=25% Similarity=0.357 Sum_probs=55.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcH----HHHHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDF----VARVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~----~~~~~~~~~~ 206 (274)
..++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+. .+.+.+..+
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 100 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG- 100 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC-
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 35789999999999999999999999999999999988765443 3344332 24444332 233333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 101 -~id~lv~nAg~ 111 (279)
T 3sju_A 101 -PIGILVNSAGR 111 (279)
T ss_dssp -SCCEEEECCCC
T ss_pred -CCcEEEECCCC
Confidence 49999999984
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.31 E-value=3.1e-06 Score=69.46 Aligned_cols=79 Identities=23% Similarity=0.388 Sum_probs=55.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+ .+... .
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g 98 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD-G 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT-S
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC-C
Confidence 4789999999999999999999999999999999987765432 3343322 244433322222 22331 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 99 ~id~lv~nAg~ 109 (273)
T 1ae1_A 99 KLNILVNNAGV 109 (273)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 59999999984
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.4e-06 Score=71.25 Aligned_cols=78 Identities=19% Similarity=0.209 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHH----HHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFV----ARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~----~~~~~~~~~~~~d~vi 213 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+...... ...|..+.+.. +.+.+..+ ++|++|
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYG--PADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHC--SEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCC--CCCEEE
Confidence 478999999999999999999999999999999998876544221111 11244443222 23333333 499999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 93 nnAg~ 97 (266)
T 3p19_A 93 NNAGM 97 (266)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99984
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.30 E-value=7.8e-06 Score=65.98 Aligned_cols=78 Identities=19% Similarity=0.269 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC---CCEEE--eCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~~~~~----~~~~~~~~~~ 208 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++.+.+. ++. ....+ |..+.+..+ .+.+..+ +
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 82 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG--P 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--S
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC--C
Confidence 4789999999999999999999999999999999988765543 222 11222 333332222 2223333 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 83 id~li~~Ag~ 92 (251)
T 1zk4_A 83 VSTLVNNAGI 92 (251)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999983
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=4.7e-06 Score=68.19 Aligned_cols=79 Identities=27% Similarity=0.331 Sum_probs=56.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-----HcCCCEE---EeCCCCcHHH----HHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADVC---INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~g~~~~---~~~~~~~~~~----~~~~~~~ 205 (274)
-.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999999999999999987765432 2244322 2444432222 2333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 99 --~iD~lvnnAg~ 109 (267)
T 1vl8_A 99 --KLDTVVNAAGI 109 (267)
T ss_dssp --CCCEEEECCCC
T ss_pred --CCCEEEECCCc
Confidence 49999999984
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.8e-06 Score=70.38 Aligned_cols=73 Identities=26% Similarity=0.444 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC--EEEeCCCCc----HHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTED----FVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~~----~~~~~~~~~~~~~~d~v 212 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++. +... ...|..+.+ +.+.+.+.++ ++|++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iDil 82 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----LPEELFVEADLTTKEGCAIVAEATRQRLG--GVDVI 82 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----SCTTTEEECCTTSHHHHHHHHHHHHHHTS--SCSEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----CCcEEEEEcCCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 599999999999999999999999999999999876531 1111 223444433 2333344444 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
+||+|.
T Consensus 83 VnnAG~ 88 (261)
T 4h15_A 83 VHMLGG 88 (261)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999983
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.3e-06 Score=67.71 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcH----HHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDF----VARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~----~~~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+. .+.+.+..+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG-- 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 5799999999999999999999999999999999988765543 2343222 23333322 223333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 49999999985
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=1e-05 Score=65.00 Aligned_cols=78 Identities=19% Similarity=0.268 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCC-CCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG-KGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~ 216 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++.+.+.+ ......+..+..+ .+.+.+.... .++|+||+++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD-WDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTTCCCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCC-HHHHHHHHHHcCCCCEEEECC
Confidence 57899999999999999999999999999999999887765543 3222233222222 2223333322 3589999999
Q ss_pred C
Q 024011 217 G 217 (274)
Q Consensus 217 g 217 (274)
|
T Consensus 85 g 85 (244)
T 1cyd_A 85 A 85 (244)
T ss_dssp C
T ss_pred c
Confidence 8
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.29 E-value=6.5e-06 Score=64.92 Aligned_cols=92 Identities=16% Similarity=0.256 Sum_probs=64.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCChh-
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGAS- 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~- 219 (274)
+|||+||+|.+|..+++.+.+.|++|++++|++++.+.+. .+...+ .|..+.+. +.. .++|+||+++|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-----~~~--~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-----SDL--SDQNVVVDAYGISP 73 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-----HHH--TTCSEEEECCCSST
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-----hhh--cCCCEEEECCcCCc
Confidence 6999999999999999999999999999999988776554 232222 23333332 223 2489999999853
Q ss_pred --------hHHHhhhccccC--CEEEEEecCC
Q 024011 220 --------YFQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 220 --------~~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
.....++.++.. ++++.++...
T Consensus 74 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 74 DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred cccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 123455666543 6898887654
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=7.5e-06 Score=66.50 Aligned_cols=77 Identities=25% Similarity=0.321 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcHH----HHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFV----ARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~----~~~~~~~~~~~~d~v 212 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++.+..+++.. ..+ |..+.+.. +.+.+..+ ++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g--~iD~l 81 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALG--RVDVL 81 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 47899999999999999999999999999999998876322334432 333 43333222 22223333 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 82 v~~Ag~ 87 (256)
T 2d1y_A 82 VNNAAI 87 (256)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.7e-06 Score=68.54 Aligned_cols=78 Identities=21% Similarity=0.298 Sum_probs=55.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCC-CEE--EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA-DVC--INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~-~~~--~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+.+ +.. ... .|..+.+..+ .+.+..+ ++|
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g--~iD 88 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALG--GFD 88 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHT--CCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcC--CCC
Confidence 47899999999999999999999999999999999887765543 321 122 2444333222 2233333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 89 ~lv~~Ag~ 96 (263)
T 3ak4_A 89 LLCANAGV 96 (263)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999983
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.8e-06 Score=69.46 Aligned_cols=78 Identities=24% Similarity=0.350 Sum_probs=55.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc--CCCEE---EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL--GADVC---INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~--g~~~~---~~~~~~~~~~----~~~~~~~ 205 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +. +.... .|..+.+..+ .+.+..+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999988765442 22 33322 2444433222 2233333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 92 --~id~lv~nAg~ 102 (267)
T 1iy8_A 92 --RIDGFFNNAGI 102 (267)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCCc
Confidence 49999999983
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=69.71 Aligned_cols=78 Identities=27% Similarity=0.333 Sum_probs=51.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EE--EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++.+.+. +++.. .. .|..+.+.. +.+.+..+ ++|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id 83 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFG--HVH 83 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence 5799999999999999999999999999999999988765543 33322 22 244433222 23333333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 84 ~lv~nAg~ 91 (257)
T 3tpc_A 84 GLVNCAGT 91 (257)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.8e-06 Score=68.90 Aligned_cols=78 Identities=23% Similarity=0.417 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEEE---eCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI---NYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~---~~~~~~~~~----~~~~~~~~~ 207 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+ ++.+..... |..+.+..+ .+.+..+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-- 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI-- 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC--
Confidence 589999999999999999999999999999999998876544 334544332 333332222 2233332
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.1e-06 Score=64.96 Aligned_cols=107 Identities=12% Similarity=0.056 Sum_probs=73.5
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEEEeCCCCcHHHHHHH
Q 024011 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKE 202 (274)
Q Consensus 124 ~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 202 (274)
.++++.+++.. ....+++++|+|+ |.+|.++++.++..|++|++++|+.++.+.+ ++++.... .. .++.+.+.
T Consensus 6 ~sv~~~a~~~~-~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-~~--~~~~~~~~- 79 (144)
T 3oj0_A 6 VSIPSIVYDIV-RKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-LI--NDIDSLIK- 79 (144)
T ss_dssp CSHHHHHHHHH-HHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-EC--SCHHHHHH-
T ss_pred ccHHHHHHHHH-HhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-ee--cCHHHHhc-
Confidence 34555555332 2234899999997 9999999999999999999999999887654 46664322 22 23322221
Q ss_pred HhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 203 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|+||++++........+.++++..++.++...
T Consensus 80 -----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 80 -----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp -----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSSC
T ss_pred -----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCCc
Confidence 3899999998653222236788888999888754
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.9e-06 Score=69.17 Aligned_cols=78 Identities=24% Similarity=0.399 Sum_probs=55.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H---c-CCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L-GADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~-g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. + . +.... .|..+.+..+ .+.+..+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g- 84 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG- 84 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999999999988765442 2 1 43322 2444332222 2223333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 85 -~id~lv~~Ag~ 95 (263)
T 3ai3_A 85 -GADILVNNAGT 95 (263)
T ss_dssp -SCSEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.29 E-value=9.5e-07 Score=71.33 Aligned_cols=76 Identities=16% Similarity=0.092 Sum_probs=54.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEE-e--cChhhHHHHH-Hc-CCCEEEeCCC-CcHHHHHHHHhCCCCccEEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-A--GSEEKLAVCK-DL-GADVCINYKT-EDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~--~~~~~~~~~~-~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi 213 (274)
+++++|+|+++++|.++++.+.+.|++|+++ + |++++++.+. ++ +.+ +.+.+. ..+.+.+.+..+ ++|++|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g--~iD~lv 77 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHGE--AIDTIV 77 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGSS--CEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHcC--CCCEEE
Confidence 5789999999999999999999999999999 6 9988776554 34 322 222222 234444444433 499999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 78 ~~Ag~ 82 (244)
T 1zmo_A 78 SNDYI 82 (244)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99983
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.7e-06 Score=73.79 Aligned_cols=124 Identities=14% Similarity=0.103 Sum_probs=86.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCC---CC------------cHHHHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYK---TE------------DFVARVKE 202 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~---~~------------~~~~~~~~ 202 (274)
++++|+|+|+ |.+|..+++.++..|++|++.+++.++++.++++|++.+. +.+ .. ...+.+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 5789999997 9999999999999999999999999999999988875431 000 00 01223334
Q ss_pred HhCCCCccEEEECCChh-------hHHHhhhccccCCEEEEEecCCCCcccc--chhhHhhcceEEEEeecc
Q 024011 203 ETGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGTQGGAKTEL--NITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~~~~~~~~~--~~~~~~~~~~~i~g~~~~ 265 (274)
... ..|+||.++..+ .....++.|+++..++.++...+..+.. +-..+..+++.+.+..+.
T Consensus 262 ~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl 331 (381)
T 3p2y_A 262 AIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL 331 (381)
T ss_dssp HHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred HHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence 443 489999986321 2467889999999999998765543332 222234566777776665
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=3.7e-06 Score=68.29 Aligned_cols=78 Identities=26% Similarity=0.431 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+..+ .+.+..+ ++|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~iD 81 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG--SVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence 4789999999999999999999999999999999988776554 3433222 2444332222 2223333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~lv~nAg~ 89 (254)
T 1hdc_A 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.28 E-value=2.8e-06 Score=71.45 Aligned_cols=78 Identities=18% Similarity=0.331 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC--C-EE--EeCCCCcHHHH----HHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--D-VC--INYKTEDFVAR----VKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~-~~--~~~~~~~~~~~----~~~~~~ 205 (274)
.++++||+|++|+||.++++.+.+.|++|++++|+.++++.+. ..+. . .. .|..+.+..+. +.+..+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999999988765543 2332 2 22 24444332222 233333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 --~id~lv~nAg~ 97 (319)
T 3ioy_A 87 --PVSILCNNAGV 97 (319)
T ss_dssp --CEEEEEECCCC
T ss_pred --CCCEEEECCCc
Confidence 49999999993
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.8e-06 Score=69.25 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCCEE-EeCCCCcHHH----HHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTEDFVA----RVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~~~~----~~~~~~~~~~~d~v 212 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++. +.+++.+...+ .|..+.+..+ .+.+..+ ++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD~l 103 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTS--SLRAV 103 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCS--CCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcC--CCCEE
Confidence 478999999999999999999999999999999987764 44455554322 2444433222 2333333 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 104 v~nAg~ 109 (260)
T 3gem_A 104 VHNASE 109 (260)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999983
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.27 E-value=6.5e-06 Score=67.81 Aligned_cols=78 Identities=22% Similarity=0.399 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC------------hhhHHH----HHHcCCCEE---EeCCCCcH---
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVC---INYKTEDF--- 196 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~~---~~~~~~~~--- 196 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+ .+.++. +++.+.... .|..+.+.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 57999999999999999999999999999999986 333332 234454332 24444332
Q ss_pred -HHHHHHHhCCCCccEEEECCCh
Q 024011 197 -VARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 197 -~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+.+.+..+ ++|++|+|+|.
T Consensus 89 ~~~~~~~~~g--~id~lv~nAg~ 109 (281)
T 3s55_A 89 FVAEAEDTLG--GIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHT--CCCEEEECCCC
T ss_pred HHHHHHHhcC--CCCEEEECCCC
Confidence 233333343 49999999984
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.27 E-value=5.6e-06 Score=67.14 Aligned_cols=78 Identities=24% Similarity=0.366 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. +++.... + |..+.+.. +.+.+..+ ++|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id 82 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG--TLN 82 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC--SCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence 4789999999999999999999999999999999988776543 4443322 2 33333222 22333333 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~lv~~Ag~ 90 (253)
T 1hxh_A 83 VLVNNAGI 90 (253)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.27 E-value=3.5e-07 Score=74.08 Aligned_cols=74 Identities=31% Similarity=0.364 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH----HHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA----RVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~d~vi~ 214 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++.+.+. + ...|..+.+..+ .+.+..+ ++|++|+
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~ 87 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQG--PVEVLVS 87 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHS--SCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcC--CCCEEEE
Confidence 4789999999999999999999999999999999876543221 1 334544433222 2233333 4899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 88 ~Ag~ 91 (247)
T 1uzm_A 88 NAGL 91 (247)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 9984
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.27 E-value=3.4e-06 Score=69.53 Aligned_cols=78 Identities=29% Similarity=0.458 Sum_probs=55.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCC---CE-E--EeCCCCcH----HHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGA---DV-C--INYKTEDF----VARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~---~~-~--~~~~~~~~----~~~~~~~~ 204 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+ ++.+. .. . .|..+.+. .+.+.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999999999999998876543 23333 11 1 24443322 22333333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 90 g--~id~lv~nAg~ 101 (281)
T 3svt_A 90 G--RLHGVVHCAGG 101 (281)
T ss_dssp S--CCCEEEECCCC
T ss_pred C--CCCEEEECCCc
Confidence 3 49999999984
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.26 E-value=6.6e-06 Score=68.46 Aligned_cols=79 Identities=16% Similarity=0.261 Sum_probs=55.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC------------hhhHHH----HHHcCCCEE---EeCCCCcHH-
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVC---INYKTEDFV- 197 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~~---~~~~~~~~~- 197 (274)
-.|+++||+|++++||.++++.+.+.|++|++++++ .++++. +++.+.... .|..+.+..
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 358999999999999999999999999999999886 444433 334454433 244443322
Q ss_pred ---HHHHHHhCCCCccEEEECCCh
Q 024011 198 ---ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 ---~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+..+ ++|++|+|+|.
T Consensus 106 ~~~~~~~~~~g--~iD~lv~nAg~ 127 (299)
T 3t7c_A 106 AAVDDGVTQLG--RLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHS--CCCEEEECCCC
T ss_pred HHHHHHHHHhC--CCCEEEECCCC
Confidence 23333343 49999999984
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=3.6e-06 Score=69.01 Aligned_cols=78 Identities=26% Similarity=0.369 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEE--eCCCCcHHH----HHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVA----RVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~----~~~~~~~~~~~d~ 211 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++.+.+. ++.....+ |..+.+..+ .+.+..+ ++|+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD~ 85 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFG--RLDC 85 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcC--CCCE
Confidence 5789999999999999999999999999999999988776654 33322222 333332222 2233333 4999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 86 lv~nAg~ 92 (270)
T 1yde_A 86 VVNNAGH 92 (270)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999984
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=6.4e-06 Score=67.14 Aligned_cols=78 Identities=21% Similarity=0.306 Sum_probs=55.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+.... .|..+.+.. +.+.+..+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG-- 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence 4789999999999999999999999999999999987765443 2343322 244433222 23333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.2e-06 Score=69.49 Aligned_cols=80 Identities=20% Similarity=0.185 Sum_probs=56.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHHHh-CCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKEET-GGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~-~~~~~d 210 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+.+.. ...++|
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999999887654432 3344322 2444443333332211 113599
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 112 ~lvnnAg~ 119 (275)
T 4imr_A 112 ILVINASA 119 (275)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999994
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=3.1e-06 Score=69.70 Aligned_cols=78 Identities=26% Similarity=0.391 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC---C-EE--EeCCCCcHH----HHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---D-VC--INYKTEDFV----ARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~---~-~~--~~~~~~~~~----~~~~~~~ 204 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+. . .. .|..+.+.. +.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999988765543 2232 2 22 244443322 2233333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 85 g--~iD~lv~nAg~ 96 (280)
T 1xkq_A 85 G--KIDVLVNNAGA 96 (280)
T ss_dssp S--CCCEEEECCCC
T ss_pred C--CCCEEEECCCC
Confidence 3 49999999983
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=6.2e-06 Score=66.52 Aligned_cols=80 Identities=21% Similarity=0.254 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++.+.+. +.+.... .|..+.+..+.+.+.. ...++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999988765443 3344332 2444433333322211 12358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 84 d~li~~Ag~ 92 (247)
T 3lyl_A 84 DILVNNAGI 92 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=6.5e-06 Score=67.71 Aligned_cols=78 Identities=32% Similarity=0.428 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+..+ .+.+..+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-- 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG-- 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence 478999999999999999999999999999999998776543 23344322 2444332222 2233333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.6e-06 Score=69.48 Aligned_cols=78 Identities=19% Similarity=0.311 Sum_probs=55.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EE--EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++.+.+. ++... .. .|..+.+..+ .+.+..+ ++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~iD 83 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG--GLH 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence 4789999999999999999999999999999999988776543 33221 12 2444333222 2233333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 84 ~lv~~Ag~ 91 (260)
T 1nff_A 84 VLVNNAGI 91 (260)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999983
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.25 E-value=6.9e-06 Score=67.52 Aligned_cols=78 Identities=18% Similarity=0.345 Sum_probs=54.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC------------hhhHHHH----HHcCCCEE---EeCCCCcHH--
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADVC---INYKTEDFV-- 197 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~~---~~~~~~~~~-- 197 (274)
.|+++||+|+++++|.++++.+.+.|++|++++++ .++++.. ++.+.... .|..+.+..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 58999999999999999999999999999999987 4444332 33444332 244443322
Q ss_pred --HHHHHHhCCCCccEEEECCCh
Q 024011 198 --ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 --~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+..+ ++|++|+|+|.
T Consensus 92 ~~~~~~~~~g--~id~lv~nAg~ 112 (278)
T 3sx2_A 92 ALQAGLDELG--RLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHC--CCCEEEECCCC
T ss_pred HHHHHHHHcC--CCCEEEECCCC
Confidence 33333343 49999999984
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=7e-06 Score=67.38 Aligned_cols=78 Identities=21% Similarity=0.193 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHHH----Hc-CCCEE---EeCCCC----cHHHHH----H
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK----DL-GADVC---INYKTE----DFVARV----K 201 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~~----~~-g~~~~---~~~~~~----~~~~~~----~ 201 (274)
.++++||+|+++++|.++++.+.+.|++|++++| ++++++.+. +. +.... .|..+. +..+.+ .
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999 877665442 22 43322 244444 323222 2
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|+|+|.
T Consensus 90 ~~~g--~id~lv~nAg~ 104 (276)
T 1mxh_A 90 RAFG--RCDVLVNNASA 104 (276)
T ss_dssp HHHS--CCCEEEECCCC
T ss_pred HhcC--CCCEEEECCCC
Confidence 2333 49999999983
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=4.3e-06 Score=68.07 Aligned_cols=78 Identities=21% Similarity=0.348 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHH-Hc----CCCEE-E--eCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCK-DL----GADVC-I--NYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~-~~----g~~~~-~--~~~~~~~~~----~~~~~~~ 205 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++ ++.+. ++ +.... + |..+.+..+ .+.+..+
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999998776 54432 21 43322 2 333332222 2223333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 83 --~iD~lv~~Ag~ 93 (260)
T 1x1t_A 83 --RIDILVNNAGI 93 (260)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 49999999984
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.25 E-value=4.4e-06 Score=69.05 Aligned_cols=78 Identities=27% Similarity=0.442 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-------H----HHHHHcCCCEE---EeCCCCcH----HHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-------L----AVCKDLGADVC---INYKTEDF----VARV 200 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-------~----~~~~~~g~~~~---~~~~~~~~----~~~~ 200 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++ + +.+++.+.... .|..+.+. .+++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 47899999999999999999999999999999998762 2 23334444322 24444322 2333
Q ss_pred HHHhCCCCccEEEECCCh
Q 024011 201 KEETGGKGVDVILDCMGA 218 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~~g~ 218 (274)
.+..+ ++|++|+|+|.
T Consensus 88 ~~~~g--~id~lvnnAg~ 103 (285)
T 3sc4_A 88 VEQFG--GIDICVNNASA 103 (285)
T ss_dssp HHHHS--CCSEEEECCCC
T ss_pred HHHcC--CCCEEEECCCC
Confidence 33343 49999999984
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.24 E-value=3.5e-06 Score=66.63 Aligned_cols=96 Identities=10% Similarity=0.206 Sum_probs=65.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh-
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY- 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~- 220 (274)
++||+|++|.+|..+++.+.+.|++|++++|+.++.+.+ .....+..+-.+..+.+.+... ++|+||+++|...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGK 76 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCC
Confidence 699999999999999999999999999999998765432 2222333333331344555554 4999999998531
Q ss_pred ---------HHHhhhccccC--CEEEEEecCCC
Q 024011 221 ---------FQRNLGSLNID--GRLFIIGTQGG 242 (274)
Q Consensus 221 ---------~~~~~~~l~~~--g~~v~~g~~~~ 242 (274)
....++.++.. ++++.++....
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS 109 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence 23344444433 58998887654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=6.5e-06 Score=67.71 Aligned_cols=77 Identities=18% Similarity=0.368 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-----HcCCCEE---EeCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADVC---INYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~g~~~~---~~~~~~~~----~~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++.+... ..+.... .|..+.+. .+.+.+..+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 104 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG- 104 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 5899999999999999999999999999999999987654432 2243322 24444322 233333343
Q ss_pred CCccEEEECCC
Q 024011 207 KGVDVILDCMG 217 (274)
Q Consensus 207 ~~~d~vi~~~g 217 (274)
++|++|+|+|
T Consensus 105 -~id~lv~nAg 114 (277)
T 4fc7_A 105 -RIDILINCAA 114 (277)
T ss_dssp -CCCEEEECCC
T ss_pred -CCCEEEECCc
Confidence 4999999998
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=6.4e-06 Score=67.05 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~ 206 (274)
.++++||+|+++++|.++++.+.+.|++|+++ .|++++++.+. +.+.... .|..+.+.. +.+.+..+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG- 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 57899999999999999999999999999987 78877655443 3344332 244443322 23333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 82 -~id~lv~nAg~ 92 (258)
T 3oid_A 82 -RLDVFVNNAAS 92 (258)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 48999999983
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=5.1e-06 Score=67.19 Aligned_cols=78 Identities=21% Similarity=0.355 Sum_probs=55.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHHHHHHHhCC--CCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVARVKEETGG--KGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~~~~~~~~~--~~~d~vi~ 214 (274)
++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +++... . .|..+.+..+.+.+.... .++|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 47999999999999999999999999999999988776554 344322 2 244443333333332211 25899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 81 nAg~ 84 (248)
T 3asu_A 81 NAGL 84 (248)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9983
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=4.9e-07 Score=73.48 Aligned_cols=93 Identities=15% Similarity=0.250 Sum_probs=60.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC--CCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG--KGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vi~~~g~ 218 (274)
+++||+|++|++|.++++.+.+.|++|++++|++++.+. ....|..+ .+.+.+.... .++|++|+|+|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~~~~Dl~~---~~~v~~~~~~~~~~id~lv~~Ag~ 72 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------DLSTAEGR---KQAIADVLAKCSKGMDGLVLCAGL 72 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHH---HHHHHHHHTTCTTCCSEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------ccccCCCC---HHHHHHHHHHhCCCCCEEEECCCC
Confidence 579999999999999999999999999999998764321 10011111 1222222221 358999999985
Q ss_pred hh-------------------HHHhhhcccc--CCEEEEEecCCC
Q 024011 219 SY-------------------FQRNLGSLNI--DGRLFIIGTQGG 242 (274)
Q Consensus 219 ~~-------------------~~~~~~~l~~--~g~~v~~g~~~~ 242 (274)
.. ...++..+.+ .|+++.+++...
T Consensus 73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 32 1233444433 389999987654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.23 E-value=3.9e-06 Score=69.84 Aligned_cols=78 Identities=24% Similarity=0.388 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC---C-EE--EeCCCCcHHH----HHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---D-VC--INYKTEDFVA----RVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~---~-~~--~~~~~~~~~~----~~~~~~ 204 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+. . .. .|..+.+..+ .+.+..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999988765442 2332 2 22 2444332222 223333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 105 g--~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 G--KIDILVNNAGA 116 (297)
T ss_dssp S--CCCEEEECCCC
T ss_pred C--CCCEEEECCCc
Confidence 3 49999999983
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-05 Score=63.68 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=64.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCChh-
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGAS- 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~- 219 (274)
++||+|++|.+|..+++.+.+.|++|++++|+.++.+.+...+...+ .|..+.+. +... ++|+||+++|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-----~~~~--~~d~vi~~ag~~~ 74 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-----ADLD--SVDAVVDALSVPW 74 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----HHHT--TCSEEEECCCCCT
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-----hhcc--cCCEEEECCccCC
Confidence 59999999999999999999999999999999988776544343332 23333332 2332 489999999862
Q ss_pred ----------hHHHhhhcccc-CCEEEEEecC
Q 024011 220 ----------YFQRNLGSLNI-DGRLFIIGTQ 240 (274)
Q Consensus 220 ----------~~~~~~~~l~~-~g~~v~~g~~ 240 (274)
....+++.++. +++++.++..
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 75 GSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp TSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred CcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 12344555543 4788888654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.23 E-value=7.1e-06 Score=66.18 Aligned_cols=78 Identities=29% Similarity=0.386 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|++|++|.++++.+.+.|++|++++| ++++++.+ ++.+.... .|..+.+..+ .+.+..+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g- 81 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG- 81 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999999998 76665443 23343322 2444432222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 82 -~id~lv~nAg~ 92 (246)
T 2uvd_A 82 -QVDILVNNAGV 92 (246)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=4.4e-06 Score=67.62 Aligned_cols=80 Identities=23% Similarity=0.330 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE--EE--eCCCCcHHHHHHHHh-CCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV--CI--NYKTEDFVARVKEET-GGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~--~~--~~~~~~~~~~~~~~~-~~~~~d~v 212 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++.+. +++... .+ |..+.+..+.+.+.. .-.++|++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 5789999999999999999999999999999999988765543 333332 22 433333222222211 01249999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 90 i~~Ag~ 95 (254)
T 2wsb_A 90 VNSAGI 95 (254)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999984
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.6e-06 Score=69.02 Aligned_cols=80 Identities=21% Similarity=0.286 Sum_probs=56.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC---eEEEEecChhhHHHHHH----c--CCCEE---EeCCCCcHHHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKD----L--GADVC---INYKTEDFVARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~---~v~~~~~~~~~~~~~~~----~--g~~~~---~~~~~~~~~~~~~~~~~~ 206 (274)
.|+++||+|++++||.++++.+.+.|+ +|++++|+.++++.+.+ . +.... .|..+.+..+.+.+....
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999988887 99999999887765532 1 32221 355554444444443211
Q ss_pred --CCccEEEECCCh
Q 024011 207 --KGVDVILDCMGA 218 (274)
Q Consensus 207 --~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 259999999983
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.23 E-value=8.5e-06 Score=67.07 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=55.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-------------ChhhHHHHH----HcCCCEE---EeCCCCcHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-------------SEEKLAVCK----DLGADVC---INYKTEDFV 197 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-------------~~~~~~~~~----~~g~~~~---~~~~~~~~~ 197 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++| ++++++.+. +.+.... .|..+.+..
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 46899999999999999999999999999999987 455554432 3344332 244443322
Q ss_pred ----HHHHHHhCCCCccEEEECCCh
Q 024011 198 ----ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 ----~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+..+ ++|++|+|+|.
T Consensus 93 ~~~~~~~~~~~g--~id~lvnnAg~ 115 (280)
T 3pgx_A 93 RELVADGMEQFG--RLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHC--CCCEEEECCCC
T ss_pred HHHHHHHHHHcC--CCCEEEECCCC
Confidence 23333343 49999999984
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.9e-06 Score=68.80 Aligned_cols=98 Identities=20% Similarity=0.203 Sum_probs=64.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh-C-CCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-G-GKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~ 216 (274)
-++++||+|+++++|.++++.+.+.|++|++++|++++.+. ....++..+.+..+.+.+.. . ..++|++|+|+
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A 95 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA 95 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 37899999999999999999999999999999998775421 11223333333233332221 1 13589999999
Q ss_pred Chh-------h--------------------HHHhhhccccCCEEEEEecCC
Q 024011 217 GAS-------Y--------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 217 g~~-------~--------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|.. . ...++..++++|+++.++...
T Consensus 96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 831 0 112334456678999997754
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.22 E-value=4.8e-06 Score=66.48 Aligned_cols=77 Identities=19% Similarity=0.332 Sum_probs=55.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCC---EEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD---VCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++||+|+++++|.++++.+.+.|++|++++|++++++.+.+ ++.. ...|..+.+..+.+.+.... .+|++|+|+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~d~lv~~A 80 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS-IPSTVVHSA 80 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS-CCSEEEECC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh-cCCEEEEeC
Confidence 579999999999999999999999999999999998876653 3322 12344444434444443332 259999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 81 g~ 82 (230)
T 3guy_A 81 GS 82 (230)
T ss_dssp CC
T ss_pred Cc
Confidence 83
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.22 E-value=7.7e-06 Score=66.38 Aligned_cols=77 Identities=22% Similarity=0.319 Sum_probs=54.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHH----HHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~----~~~~~~~~~ 208 (274)
++++||+|++|++|.++++.+.+.|++|++++|++++++.+. +.+... . .|..+.+..+. +.+..+ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG--G 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT--C
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence 578999999999999999999999999999999987665442 234332 2 24443322222 222332 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.1e-05 Score=64.67 Aligned_cols=75 Identities=28% Similarity=0.409 Sum_probs=53.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHH---HHHHHHhCCCCccEEEEC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFV---ARVKEETGGKGVDVILDC 215 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~---~~~~~~~~~~~~d~vi~~ 215 (274)
+++++|+|++|++|.++++.+.+.|++|++++|++++. .++++...+ .|..+++.. +.+.+..+ ++|++|+|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g--~id~lv~~ 77 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--AQSLGAVPLPTDLEKDDPKGLVKRALEALG--GLHVLVHA 77 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHTCEEEECCTTTSCHHHHHHHHHHHHT--SCCEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHhhCcEEEecCCchHHHHHHHHHHHHHcC--CCCEEEEC
Confidence 57899999999999999999999999999999987763 233442222 244333322 23333343 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 78 Ag~ 80 (239)
T 2ekp_A 78 AAV 80 (239)
T ss_dssp CCC
T ss_pred CCC
Confidence 984
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=7.3e-06 Score=67.39 Aligned_cols=79 Identities=15% Similarity=0.236 Sum_probs=54.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-------------ChhhHHHH----HHcCCCEE---EeCCCCcHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-------------SEEKLAVC----KDLGADVC---INYKTEDFV 197 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-------------~~~~~~~~----~~~g~~~~---~~~~~~~~~ 197 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++| +.++++.+ ...+.... .|..+.+..
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 35899999999999999999999999999999988 44444333 23344332 244433222
Q ss_pred ----HHHHHHhCCCCccEEEECCCh
Q 024011 198 ----ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 ----~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+..+ ++|++|+|+|.
T Consensus 89 ~~~~~~~~~~~g--~id~lvnnAg~ 111 (277)
T 3tsc_A 89 RKVVDDGVAALG--RLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHS--CCCEEEECCCC
T ss_pred HHHHHHHHHHcC--CCCEEEECCCC
Confidence 23333333 49999999984
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.21 E-value=4.3e-06 Score=68.86 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=56.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++++.+. +++.... .|..+.+..+ .+.+..+ ++|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~id 81 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG--RVD 81 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC--CCC
Confidence 4689999999999999999999999999999999988876654 3443322 2444433222 2233333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~lv~~Ag~ 89 (281)
T 3m1a_A 82 VLVNNAGR 89 (281)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999984
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.8e-06 Score=68.44 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=70.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCC--CE-EEeCCCCcHHHHHHHHh-
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DV-CINYKTEDFVARVKEET- 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~--~~-~~~~~~~~~~~~~~~~~- 204 (274)
....++++++||..|+ | .|..+..+++. +.+++.++.+++.++.+++ .+. .. ....+..+ ..
T Consensus 85 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~ 154 (248)
T 2yvl_A 85 LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD-------AEV 154 (248)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT-------SCC
T ss_pred HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh-------ccc
Confidence 5567889999999997 4 68888888888 8899999999998877764 232 22 12222111 11
Q ss_pred CCCCccEEEECCChh--hHHHhhhccccCCEEEEEecC
Q 024011 205 GGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...++|+|+.+.+.. .+..+.+.++++|+++.....
T Consensus 155 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 155 PEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 234699999887753 477888999999999988653
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=9.4e-06 Score=67.01 Aligned_cols=78 Identities=19% Similarity=0.258 Sum_probs=54.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC----------------hhhHHHHH----HcCCCEE---EeCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----------------EEKLAVCK----DLGADVC---INYKTED 195 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~----------------~~~~~~~~----~~g~~~~---~~~~~~~ 195 (274)
.|+++||+|+++++|.++++.+.+.|++|++++++ .++++.+. ..+.... .|..+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 58999999999999999999999999999999886 44444332 3343322 2444433
Q ss_pred HH----HHHHHHhCCCCccEEEECCCh
Q 024011 196 FV----ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 196 ~~----~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.. +.+.+..+ ++|++|+|+|.
T Consensus 90 ~v~~~~~~~~~~~g--~id~lv~nAg~ 114 (286)
T 3uve_A 90 ALKAAVDSGVEQLG--RLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHS--CCCEEEECCCC
T ss_pred HHHHHHHHHHHHhC--CCCEEEECCcc
Confidence 22 33333343 49999999984
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-05 Score=66.49 Aligned_cols=42 Identities=17% Similarity=0.122 Sum_probs=37.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC 180 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~ 180 (274)
.++++||+|+++++|.++++.+.+.|++|++++ |+.++++.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~ 50 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL 50 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 478999999999999999999999999999999 988776544
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.21 E-value=6.6e-06 Score=66.97 Aligned_cols=79 Identities=24% Similarity=0.275 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G--GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~--~~~ 208 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. +.+... . .|..+.+..+.+.+.. . ..+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999999987765442 224322 2 2444433333332221 0 124
Q ss_pred ccEEEECCC
Q 024011 209 VDVILDCMG 217 (274)
Q Consensus 209 ~d~vi~~~g 217 (274)
+|++|+|+|
T Consensus 84 id~lvnnAg 92 (260)
T 2qq5_A 84 LDVLVNNAY 92 (260)
T ss_dssp CCEEEECCC
T ss_pred ceEEEECCc
Confidence 999999994
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.21 E-value=4e-06 Score=68.90 Aligned_cols=78 Identities=21% Similarity=0.351 Sum_probs=54.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc---C---CC-EE--EeCCCCcHHH----HHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---G---AD-VC--INYKTEDFVA----RVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g---~~-~~--~~~~~~~~~~----~~~~~~ 204 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. ++ . .. .. .|..+.+..+ .+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999988765543 22 1 11 12 2444332222 223333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 85 g--~id~lv~~Ag~ 96 (278)
T 1spx_A 85 G--KLDILVNNAGA 96 (278)
T ss_dssp S--CCCEEEECCC-
T ss_pred C--CCCEEEECCCC
Confidence 3 49999999984
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=7.8e-06 Score=66.51 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=55.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+.. +.+.+..+
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG-- 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 579999999999999999999999999999999998766443 23343322 233332222 22233333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 91 ~iD~lv~~Ag~ 101 (260)
T 2zat_A 91 GVDILVSNAAV 101 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.20 E-value=7e-06 Score=67.53 Aligned_cols=78 Identities=32% Similarity=0.421 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc---CCCEEE--eCCCCcHHHH----HHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCI--NYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~--~~~~~~~~~~----~~~~~~~~~ 208 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. ++ +....+ |..+.+..+. +.+..+ +
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA--R 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS--C
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC--C
Confidence 4789999999999999999999999999999999988765443 22 211122 3333322222 222332 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 106 iD~lvnnAg~ 115 (276)
T 2b4q_A 106 LDILVNNAGT 115 (276)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.4e-06 Score=67.65 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=50.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcH----HHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDF----VARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~v 212 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++.+. ....+ |..+.+. .+.+.+..+..++|++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 36789999999999999999999999999999998765321 11122 2222221 2223333321359999
Q ss_pred EECCC
Q 024011 213 LDCMG 217 (274)
Q Consensus 213 i~~~g 217 (274)
|+|+|
T Consensus 77 v~~Ag 81 (236)
T 1ooe_A 77 FCVAG 81 (236)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99998
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.20 E-value=5.5e-06 Score=67.57 Aligned_cols=79 Identities=23% Similarity=0.354 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~~~~~~----~~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++++.+. +.+.... + |..+.+..+.+ .+..+ .
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 91 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG-G 91 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT-T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC-C
Confidence 4789999999999999999999999999999999987665432 3343322 2 33332222222 22221 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 92 ~id~li~~Ag~ 102 (266)
T 1xq1_A 92 KLDILINNLGA 102 (266)
T ss_dssp CCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 49999999984
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-05 Score=66.70 Aligned_cols=78 Identities=18% Similarity=0.321 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHHH----Hc-CCCEE-E--eCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK----DL-GADVC-I--NYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~~----~~-g~~~~-~--~~~~~~~~~----~~~~~~~ 205 (274)
.++++||+|+++++|.++++.+.+.|++|++++| +.++++.+. +. +.... + |..+.+..+ .+.+..+
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 4789999999999999999999999999999998 445444332 22 32222 2 333332222 3333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 104 --~iD~lv~nAg~ 114 (281)
T 3v2h_A 104 --GADILVNNAGV 114 (281)
T ss_dssp --SCSEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 49999999984
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=4.6e-06 Score=68.53 Aligned_cols=80 Identities=25% Similarity=0.306 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---HcCCCEE---EeCCCCcHHHHHHHHh-CCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADVC---INYKTEDFVARVKEET-GGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~~---~~~~~~~~~~~~~~~~-~~~~~d~ 211 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++...+..+ +.+.... .|..+.+..+.+.+.. ...++|+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~ 109 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV 109 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence 5899999999999999999999999999999997654333333 3333222 2444433333332211 1135999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 110 lv~nAg~ 116 (273)
T 3uf0_A 110 LVNNAGI 116 (273)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999984
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.5e-06 Score=69.69 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+++||+|++|++|.++++.+.+.| ++|++++|++++++.+...+. ..+..+-.+ .+.+.+... ++|+||+++|.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~d-~~~~~~~~~--~~D~vv~~a~~ 98 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLN-HAALKQAMQ--GQDIVYANLTG 98 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTE-EEEECCTTC-HHHHHHHHT--TCSEEEEECCS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCc-EEEEecCCC-HHHHHHHhc--CCCEEEEcCCC
Confidence 4689999999999999999999999 899999999876543222122 222222222 233444443 48999999986
Q ss_pred hh----HHHhhhccccC--CEEEEEecCC
Q 024011 219 SY----FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 219 ~~----~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
.. ...+++.++.. ++|+.++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 99 EDLDIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence 43 34455555433 6899888755
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.6e-06 Score=67.35 Aligned_cols=78 Identities=23% Similarity=0.302 Sum_probs=56.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHHHHHHHhCC-CCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVARVKEETGG-KGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~~-~~~d~vi 213 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++++.+. +++.... .|..+.+..+.+.+.... .++|++|
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 4789999999999999999999999999999999998876654 4554322 244444333444333322 3589999
Q ss_pred ECC
Q 024011 214 DCM 216 (274)
Q Consensus 214 ~~~ 216 (274)
+|+
T Consensus 109 ~~a 111 (281)
T 3ppi_A 109 VAH 111 (281)
T ss_dssp ECC
T ss_pred Ecc
Confidence 993
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.4e-06 Score=68.92 Aligned_cols=79 Identities=24% Similarity=0.331 Sum_probs=54.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC----------hhhHH----HHHHcCCCEEE---eCCCCcH----
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----------EEKLA----VCKDLGADVCI---NYKTEDF---- 196 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~----------~~~~~----~~~~~g~~~~~---~~~~~~~---- 196 (274)
-.|+++||+|+++++|.++++.+.+.|++|++++|+ .++.+ .+++.+..... |..+.+.
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 358999999999999999999999999999999886 44433 33344543332 3333222
Q ss_pred HHHHHHHhCCCCccEEEECCCh
Q 024011 197 VARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+.+.+..+ ++|++|+|+|.
T Consensus 105 ~~~~~~~~g--~iD~lv~nAg~ 124 (322)
T 3qlj_A 105 IQTAVETFG--GLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHS--CCCEEECCCCC
T ss_pred HHHHHHHcC--CCCEEEECCCC
Confidence 233333333 49999999984
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.20 E-value=9.8e-06 Score=68.03 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=54.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC------------hhhHHH----HHHcCCCEE---EeCCCCcHH-
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVC---INYKTEDFV- 197 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~~---~~~~~~~~~- 197 (274)
-.|+++||+|++++||.++++.+.+.|++|++++++ .++++. +++.+.... .|..+.+..
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 358999999999999999999999999999999875 444433 234454433 244443322
Q ss_pred ---HHHHHHhCCCCccEEEECCCh
Q 024011 198 ---ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 ---~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+..+ ++|++|+|+|.
T Consensus 124 ~~~~~~~~~~g--~iD~lVnnAg~ 145 (317)
T 3oec_A 124 AVVDEALAEFG--HIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHS--CCCEEEECCCC
T ss_pred HHHHHHHHHcC--CCCEEEECCCC
Confidence 23333343 49999999984
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-05 Score=66.29 Aligned_cols=78 Identities=26% Similarity=0.280 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCEE---EeCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC---INYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~~---~~~~~~~~----~~~~~~~~~~ 206 (274)
.++++||+|+++++|.++++.+.+.|++|+++++ +.+..+.+ ++.+.... .|..+.+. .+.+.+..+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g- 105 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG- 105 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 5899999999999999999999999999999988 44444333 33444332 24444332 233333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 106 -~id~lv~nAg~ 116 (269)
T 4dmm_A 106 -RLDVLVNNAGI 116 (269)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=8.1e-06 Score=66.45 Aligned_cols=78 Identities=24% Similarity=0.333 Sum_probs=55.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++.+.+. +++.... .|..+.+..+ .+.+..+ ++|
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id 88 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG--RVD 88 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC--CCC
Confidence 4789999999999999999999999999999999987765543 4443322 2433332222 2222333 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 89 ~li~~Ag~ 96 (265)
T 2o23_A 89 VAVNCAGI 96 (265)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999983
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.19 E-value=9.3e-06 Score=66.67 Aligned_cols=78 Identities=24% Similarity=0.405 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-------HH----HHHHcCCCEE---EeCCCCcHH----HHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-------LA----VCKDLGADVC---INYKTEDFV----ARV 200 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-------~~----~~~~~g~~~~---~~~~~~~~~----~~~ 200 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+.++ ++ .++..+.... .|..+.+.. +++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999999999998653 22 2223343322 244443322 333
Q ss_pred HHHhCCCCccEEEECCCh
Q 024011 201 KEETGGKGVDVILDCMGA 218 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~~g~ 218 (274)
.+..+ ++|++|+|+|.
T Consensus 85 ~~~~g--~iD~lvnnAG~ 100 (274)
T 3e03_A 85 VDTFG--GIDILVNNASA 100 (274)
T ss_dssp HHHHS--CCCEEEECCCC
T ss_pred HHHcC--CCCEEEECCCc
Confidence 33343 49999999984
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.6e-05 Score=64.83 Aligned_cols=72 Identities=19% Similarity=0.244 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHH----HHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVA----RVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~----~~~~~~~~~~~d~v 212 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++ . ..... .|..+.+..+ .+.+..+ ++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--~iD~l 78 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----E-AKYDHIECDVTNPDQVKASIDHIFKEYG--SISVL 78 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----S-CSSEEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----C-CceEEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 47899999999999999999999999999999988764 1 11122 2444333222 2333333 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 79 v~~Ag~ 84 (264)
T 2dtx_A 79 VNNAGI 84 (264)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.19 E-value=7.3e-06 Score=66.95 Aligned_cols=80 Identities=14% Similarity=0.192 Sum_probs=55.3
Q ss_pred CCCCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHH----HHHHHh
Q 024011 137 LSPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVA----RVKEET 204 (274)
Q Consensus 137 ~~~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~----~~~~~~ 204 (274)
..+++++||+|++ +++|.++++.+.+.|++|++++|+++..+.++ +.+.... .|..+.+..+ .+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4568999999998 99999999999999999999998865443332 3333222 2444433222 233333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|+|+|.
T Consensus 91 g--~id~lv~nAg~ 102 (271)
T 3ek2_A 91 D--SLDGLVHSIGF 102 (271)
T ss_dssp S--CEEEEEECCCC
T ss_pred C--CCCEEEECCcc
Confidence 3 49999999984
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.9e-05 Score=63.02 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=55.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEE--eCCCCcHH----HHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFV----ARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~----~~~~~~~~~~~~d~v 212 (274)
+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+. ++.....+ |..+.+.. +.+.+..+ ++|++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~l 82 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFG--ELSAL 82 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 678999999999999999999999999999999988776554 33322333 33333222 22223333 48999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 83 i~~Ag~ 88 (234)
T 2ehd_A 83 VNNAGV 88 (234)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999983
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.1e-05 Score=65.63 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=53.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCK----DLGADVC---INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~ 206 (274)
+++++|+|+++++|.++++.+.+.|++|++++|+.++ ++.+. +.+.... .|..+.+.. +.+.+..+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 80 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG- 80 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC-
Confidence 6899999999999999999999999999999998776 44332 2243322 244433222 23333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 81 -~iD~lv~nAg~ 91 (258)
T 3a28_C 81 -GFDVLVNNAGI 91 (258)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=9.8e-06 Score=65.23 Aligned_cols=78 Identities=23% Similarity=0.412 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-----cCCCEE-E--eCCCCcHHHHH----HHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC-I--NYKTEDFVARV----KEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~~~~-~--~~~~~~~~~~~----~~~~~~ 206 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+.+ .+.... + |..+.+..+.+ .+..+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 84 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD- 84 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC-
Confidence 47899999999999999999999999999999999877654432 243322 2 33333222222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|+||+++|.
T Consensus 85 -~~d~vi~~Ag~ 95 (248)
T 2pnf_A 85 -GIDILVNNAGI 95 (248)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.17 E-value=3e-06 Score=69.44 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=53.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHH----HHHHHHhCCCCc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFV----ARVKEETGGKGV 209 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~----~~~~~~~~~~~~ 209 (274)
....|+++||+|+++++|.++++.+.+.|++|++++|+++... +.... .|..+.+.. +.+.+..+ ++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i 82 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYG--RI 82 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHS--CC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcC--CC
Confidence 3456899999999999999999999999999999998876542 12222 344443322 23333333 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 83 D~lv~nAg~ 91 (269)
T 3vtz_A 83 DILVNNAGI 91 (269)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999984
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=8e-06 Score=65.69 Aligned_cols=80 Identities=23% Similarity=0.322 Sum_probs=56.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHHc-CCCE-E--EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDL-GADV-C--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~-g~~~-~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.+++++|+|++|++|.++++.+.+.| ++|++++|+.++.+.++++ +... . .|..+.+..+ .+.+..+..+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999999999999999999999 9999999998887777655 2222 2 2333332222 2222332114
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 82 id~li~~Ag~ 91 (250)
T 1yo6_A 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCcc
Confidence 9999999974
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.17 E-value=1.2e-05 Score=66.36 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHHH-----HcCCCEE---EeCCC----CcHHH----HHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK-----DLGADVC---INYKT----EDFVA----RVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~~-----~~g~~~~---~~~~~----~~~~~----~~~ 201 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+. ++++.+. +.+.... .|..+ .+..+ .+.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999987 6554332 2343322 24333 22222 222
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|+|+|.
T Consensus 102 ~~~g--~iD~lvnnAG~ 116 (288)
T 2x9g_A 102 RAFG--RCDVLVNNASA 116 (288)
T ss_dssp HHHS--CCCEEEECCCC
T ss_pred HhcC--CCCEEEECCCC
Confidence 2333 49999999984
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.17 E-value=7.7e-06 Score=67.42 Aligned_cols=79 Identities=25% Similarity=0.316 Sum_probs=55.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCEE---EeCCCCcH----HHHHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC---INYKTEDF----VARVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~~---~~~~~~~~----~~~~~~~~~ 205 (274)
..++++||+|+++++|.++++.+.+.|++|+++++ ++++++.+ ++.+.... .|..+.+. .+.+.+..+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999999999999985 55554333 33444332 24444333 333333443
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 107 --~iD~lvnnAg~ 117 (280)
T 4da9_A 107 --RIDCLVNNAGI 117 (280)
T ss_dssp --CCCEEEEECC-
T ss_pred --CCCEEEECCCc
Confidence 49999999985
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.16 E-value=6.2e-06 Score=69.25 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=32.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
.++++||+|+ +++||.++++.+.+.|++|++++|+
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP 44 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence 4789999998 8999999999999999999999864
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.16 E-value=1e-05 Score=65.64 Aligned_cols=78 Identities=24% Similarity=0.419 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-EE--eCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~----~~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++.+.+ ++.+... .+ |..+.+..+.+ .+..+
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG-- 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC--
Confidence 478999999999999999999999999999999998765433 2334332 22 33333222222 22233
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=8.2e-06 Score=66.89 Aligned_cols=78 Identities=22% Similarity=0.333 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++.+.+. +.+... . .|..+.+..+.+ .+..+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-- 107 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG-- 107 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC--
Confidence 5789999999999999999999999999999999987765432 334332 2 243333322222 22232
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 49999999984
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.5e-05 Score=66.91 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=55.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---------ChhhHHH----HHHcCCCEEEeCCCCcH----HHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---------SEEKLAV----CKDLGADVCINYKTEDF----VARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---------~~~~~~~----~~~~g~~~~~~~~~~~~----~~~~~ 201 (274)
.|+++||+|++++||.++++.+.+.|++|++.++ +.++.+. +++.+.....|..+.+. .+.+.
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 5799999999999999999999999999999753 4444432 33445555566655432 33333
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|+|+|.
T Consensus 88 ~~~g--~iD~lVnnAG~ 102 (319)
T 1gz6_A 88 DTFG--RIDVVVNNAGI 102 (319)
T ss_dssp HHTS--CCCEEEECCCC
T ss_pred HHcC--CCCEEEECCCC
Confidence 3343 49999999983
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=7.7e-06 Score=67.97 Aligned_cols=77 Identities=17% Similarity=0.367 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H---c-CCCEE-E--eCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L-GADVC-I--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~-g~~~~-~--~~~~~~~~~~----~~~~~~~ 206 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+. + . +.... + |..+.+..+. +.+..+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g- 103 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG- 103 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999999999987765432 2 1 43322 2 4333322222 222232
Q ss_pred CCccEEEECCC
Q 024011 207 KGVDVILDCMG 217 (274)
Q Consensus 207 ~~~d~vi~~~g 217 (274)
.+|++|+|+|
T Consensus 104 -~id~li~~Ag 113 (302)
T 1w6u_A 104 -HPNIVINNAA 113 (302)
T ss_dssp -SCSEEEECCC
T ss_pred -CCCEEEECCC
Confidence 4899999998
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=9.5e-06 Score=65.95 Aligned_cols=80 Identities=23% Similarity=0.263 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHH---cCCeEEEEecChhhHHHHH-Hc-----CCCE-E--EeCCCCcHHHHHHHHh--
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCK-DL-----GADV-C--INYKTEDFVARVKEET-- 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~---~g~~v~~~~~~~~~~~~~~-~~-----g~~~-~--~~~~~~~~~~~~~~~~-- 204 (274)
.++++||+|+++++|.++++.+.+ .|++|++++|++++++.+. ++ +... . .|..+.+..+.+.+..
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999998 8999999999988765543 22 3222 2 2444433333333322
Q ss_pred --CCCCcc--EEEECCCh
Q 024011 205 --GGKGVD--VILDCMGA 218 (274)
Q Consensus 205 --~~~~~d--~vi~~~g~ 218 (274)
...++| ++|+|+|.
T Consensus 85 ~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred ccccccCCccEEEECCcc
Confidence 223478 99999984
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.9e-05 Score=66.62 Aligned_cols=42 Identities=17% Similarity=0.122 Sum_probs=37.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC 180 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~ 180 (274)
.++++||+|++++||.++++.+.+.|++|++++ |++++++.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~ 87 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL 87 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 478999999999999999999999999999999 988776544
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.15 E-value=9.4e-06 Score=70.15 Aligned_cols=84 Identities=19% Similarity=0.166 Sum_probs=58.2
Q ss_pred hcCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCeEEEEecChhhH----------------HHHHHcCCCEE-E--eCC
Q 024011 134 TSHL-SPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKL----------------AVCKDLGADVC-I--NYK 192 (274)
Q Consensus 134 ~~~~-~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~~----------------~~~~~~g~~~~-~--~~~ 192 (274)
...+ +.++++||+|+++|+|.++++.+.. .|++|++++++.+.. +.+++.|.... + |..
T Consensus 54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt 133 (422)
T 3s8m_A 54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF 133 (422)
T ss_dssp TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence 3455 4689999999999999999999999 999999998765421 34455665433 2 444
Q ss_pred CCcH----HHHHHHHhCCCCccEEEECCCh
Q 024011 193 TEDF----VARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 193 ~~~~----~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+. .+.+.+.++ .++|+++||+|.
T Consensus 134 d~~~v~~~v~~i~~~~~-G~IDiLVNNAG~ 162 (422)
T 3s8m_A 134 SDAARAQVIELIKTEMG-GQVDLVVYSLAS 162 (422)
T ss_dssp SHHHHHHHHHHHHHHSC-SCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcC-CCCCEEEEcCcc
Confidence 4333 333344441 249999999985
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.9e-05 Score=64.20 Aligned_cols=43 Identities=21% Similarity=0.112 Sum_probs=38.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++.+.+.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 48 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV 48 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 4789999999999999999999999999999999988776553
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.2e-05 Score=66.86 Aligned_cols=77 Identities=23% Similarity=0.341 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-----cCCCE-E--EeCCCCcHHH----HHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-----LGADV-C--INYKTEDFVA----RVKE 202 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-----~g~~~-~--~~~~~~~~~~----~~~~ 202 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+. + .+... . .|..+.+..+ .+.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999987765432 2 13222 2 2333332222 2223
Q ss_pred HhCCCCccEEEECCC
Q 024011 203 ETGGKGVDVILDCMG 217 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g 217 (274)
..+ ++|++|+|+|
T Consensus 97 ~~g--~id~li~~Ag 109 (303)
T 1yxm_A 97 TFG--KINFLVNNGG 109 (303)
T ss_dssp HHS--CCCEEEECCC
T ss_pred HcC--CCCEEEECCC
Confidence 333 4999999998
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.3e-05 Score=67.51 Aligned_cols=78 Identities=22% Similarity=0.403 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-----hhhHHHH----HHcCCCEE---EeCCCCcHH----HHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-----EEKLAVC----KDLGADVC---INYKTEDFV----ARVKE 202 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-----~~~~~~~----~~~g~~~~---~~~~~~~~~----~~~~~ 202 (274)
.++++||+|++|++|.++++.+.+.|++|+++.|+ .++++.+ ++.+.... .|..+.+.. +.+.+
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999998875 3333333 23343322 244443222 23333
Q ss_pred HhCCCCccEEEECCCh
Q 024011 203 ETGGKGVDVILDCMGA 218 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~ 218 (274)
..+ ++|++|+|+|.
T Consensus 84 ~~g--~iD~lVnnAG~ 97 (324)
T 3u9l_A 84 EDG--RIDVLIHNAGH 97 (324)
T ss_dssp HHS--CCSEEEECCCC
T ss_pred HcC--CCCEEEECCCc
Confidence 333 49999999993
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.4e-05 Score=65.20 Aligned_cols=78 Identities=24% Similarity=0.432 Sum_probs=54.7
Q ss_pred CCCEEEEecCCc-hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-C-EE--EeCCCCcHH----HHHHHHhC
Q 024011 139 PGESFLVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-D-VC--INYKTEDFV----ARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g-~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~-~~--~~~~~~~~~----~~~~~~~~ 205 (274)
.++++||+|++| ++|.++++.+.+.|++|++++|+.++++.+. +.+. . .. .|..+.+.. +.+.+..+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 589999999974 8999999999999999999999988765443 2222 2 22 244443322 23333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 101 --~id~li~~Ag~ 111 (266)
T 3o38_A 101 --RLDVLVNNAGL 111 (266)
T ss_dssp --CCCEEEECCCC
T ss_pred --CCcEEEECCCc
Confidence 49999999984
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.2e-05 Score=65.12 Aligned_cols=78 Identities=24% Similarity=0.353 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCCCEE-E--eCCCCcHHH----HHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVC-I--NYKTEDFVA----RVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~~-~--~~~~~~~~~----~~~~~~~~~~~ 209 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++ .+.+++.+.... + |..+.+..+ .+.+..+ ++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~i 80 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG--GV 80 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS--SC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC--CC
Confidence 47899999999999999999999999999999987652 233333344332 2 333322222 2223333 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 81 d~lv~~Ag~ 89 (255)
T 2q2v_A 81 DILVNNAGI 89 (255)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.6e-05 Score=65.05 Aligned_cols=78 Identities=22% Similarity=0.401 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHH----HHcCCCEE-E--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVC----KDLGADVC-I--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~----~~~g~~~~-~--~~~~~~~~----~~~~~~~~~ 206 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+. +..+.+ ++.+.... + |..+.+.. +.+.+..+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 106 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG- 106 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence 589999999999999999999999999999999853 333332 34444332 2 33332222 22333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 107 -~id~li~nAg~ 117 (271)
T 4iin_A 107 -GLSYLVNNAGV 117 (271)
T ss_dssp -SCCEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 49999999984
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.12 E-value=5.5e-06 Score=68.03 Aligned_cols=78 Identities=15% Similarity=0.271 Sum_probs=54.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--C-EEE--eCCCCcHHHHHHHHhCC--CCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTEDFVARVKEETGG--KGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~~~~~~~~~~~~--~~~d~v 212 (274)
+++||+|+++++|.++++.+.+.|++|++++|++++++.+. ++.. . ..+ |..+.+..+.+.+.... .++|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 78999999999999999999999999999999988776553 2221 1 222 44443333333332211 248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 102 vnnAG~ 107 (272)
T 2nwq_A 102 INNAGL 107 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.12 E-value=9.6e-06 Score=66.96 Aligned_cols=77 Identities=29% Similarity=0.371 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE--E--EeCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV--C--INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~--~--~~~~~~~~~~~----~~~~~~~ 206 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++.+. +.+... . .|..+.+..+. +.+..+
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g- 105 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG- 105 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999999999988765543 334322 2 23333322222 223333
Q ss_pred CCccEEEEC-CC
Q 024011 207 KGVDVILDC-MG 217 (274)
Q Consensus 207 ~~~d~vi~~-~g 217 (274)
++|++|+| +|
T Consensus 106 -~iD~li~naag 116 (286)
T 1xu9_A 106 -GLDMLILNHIT 116 (286)
T ss_dssp -SCSEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 49999999 45
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.2e-05 Score=65.90 Aligned_cols=78 Identities=15% Similarity=0.333 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--C-EEE--eCCCCcHHHH----HHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~~~~~----~~~~~~~~~ 208 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++.+.+. +++. . ..+ |..+.+..+. +.+..+ +
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 92 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG--K 92 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC--C
Confidence 5789999999999999999999999999999999887665443 3322 1 222 4333322222 222333 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 93 id~li~~Ag~ 102 (278)
T 2bgk_A 93 LDIMFGNVGV 102 (278)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999983
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.4e-05 Score=64.63 Aligned_cols=78 Identities=19% Similarity=0.344 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHH----HHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~----~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|++++.+.+ ++.+.... .|..+.+..+.+. +..+
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 87 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG-- 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC--
Confidence 478999999999999999999999999999999998766443 23343322 2333333222222 2232
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||+++|.
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999984
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.2e-05 Score=66.43 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=54.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+.+.. .-.++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999998877665432 2344322 2444433333322211 11249
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 123 d~li~~Ag~ 131 (285)
T 2c07_A 123 DILVNNAGI 131 (285)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.3e-06 Score=66.93 Aligned_cols=77 Identities=26% Similarity=0.242 Sum_probs=53.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc----CCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+. ++ +... . .|..+.+..+ .+.+..+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG-- 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence 578999999999999999999999999999999988765543 22 2222 2 2333332222 2223333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999973
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.8e-05 Score=64.10 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCh--hhHHHHHHc--CCC-EE--EeCCCC-cHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE--EKLAVCKDL--GAD-VC--INYKTE-DFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~--~~~~~~~~~--g~~-~~--~~~~~~-~~~~----~~~~~~~ 205 (274)
.+++++|+|++|++|.++++.+.+.|++ |++++|++ +.++.+.+. +.. .. .|..+. +..+ .+.+..+
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999996 99999876 334444433 222 12 244433 2222 2223333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 --~id~lv~~Ag~ 94 (254)
T 1sby_A 84 --TVDILINGAGI 94 (254)
T ss_dssp --CCCEEEECCCC
T ss_pred --CCCEEEECCcc
Confidence 49999999984
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.3e-05 Score=64.89 Aligned_cols=78 Identities=22% Similarity=0.374 Sum_probs=53.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHHH----HcCCCE-EE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCK----DLGADV-CI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+ .++++.+. ..+... .+ |..+.+..+ .+.+..+
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g- 84 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG- 84 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 47899999999999999999999999999999998 66554432 234322 22 333322222 2222332
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 85 -~id~vi~~Ag~ 95 (258)
T 3afn_B 85 -GIDVLINNAGG 95 (258)
T ss_dssp -SCSEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.5e-05 Score=66.94 Aligned_cols=84 Identities=17% Similarity=0.211 Sum_probs=57.4
Q ss_pred hhcCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCeEEEEecChhh----------------HHHHHHcCCCEE-E--eC
Q 024011 133 MTSHL-SPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEK----------------LAVCKDLGADVC-I--NY 191 (274)
Q Consensus 133 ~~~~~-~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~----------------~~~~~~~g~~~~-~--~~ 191 (274)
....+ ..++++||+|+++|+|.++++.+.. .|++|++++++.+. .+.+++.|.... + |.
T Consensus 39 ~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv 118 (405)
T 3zu3_A 39 TEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA 118 (405)
T ss_dssp HHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred hcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC
Confidence 33444 5689999999999999999999999 99999998875432 123445564432 2 43
Q ss_pred CCCcH----HHHHHHHhCCCCccEEEECCCh
Q 024011 192 KTEDF----VARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 192 ~~~~~----~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+.+. .+.+.+.++ ++|+++||+|.
T Consensus 119 td~~~v~~~v~~i~~~~G--~IDiLVNNAG~ 147 (405)
T 3zu3_A 119 FSDEIKQLTIDAIKQDLG--QVDQVIYSLAS 147 (405)
T ss_dssp TSHHHHHHHHHHHHHHTS--CEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcC--CCCEEEEcCcc
Confidence 33332 333444443 49999999985
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2e-05 Score=63.51 Aligned_cols=78 Identities=31% Similarity=0.352 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHH----HHHcCCCEE-E--eCCCCcH----HHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGADVC-I--NYKTEDF----VARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~----~~~~g~~~~-~--~~~~~~~----~~~~~~~~~~ 206 (274)
.++++||+|+++++|.++++.+.+.|++|++++++ .++.+. +++.+.... + |..+.+. .+++.+..+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 81 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG- 81 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence 46899999999999999999999999999998764 344433 334454432 2 3333322 233333343
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 82 -~id~lv~nAg~ 92 (246)
T 3osu_A 82 -SLDVLVNNAGI 92 (246)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=9.5e-06 Score=65.91 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.++++||+|++|++|.++++.+.+.|++|++++| ++++.+.+ ++.+... .+ |..+.+..+ .+.+..+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g- 84 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG- 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999999999 76655433 2334322 22 333322222 2222333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 85 -~id~li~~Ag~ 95 (261)
T 1gee_A 85 -KLDVMINNAGL 95 (261)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 48999999983
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.3e-05 Score=64.50 Aligned_cols=79 Identities=11% Similarity=0.170 Sum_probs=55.2
Q ss_pred CCCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh--hhHHHHHH-cCCCEEE--eCCCCcHHH----HHHHHhCC
Q 024011 138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCKD-LGADVCI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~-~g~~~~~--~~~~~~~~~----~~~~~~~~ 206 (274)
-.++++||+|++ +|+|.++++.+.+.|++|++++|+. +.++.+.+ .+....+ |..+.+..+ .+.+..+
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g- 102 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD- 102 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS-
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC-
Confidence 357999999988 6699999999999999999999987 55555543 3333333 433333222 2333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 103 -~id~li~nAg~ 113 (280)
T 3nrc_A 103 -GLDAIVHSIAF 113 (280)
T ss_dssp -SCCEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 49999999984
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.09 E-value=1.6e-05 Score=72.55 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh---------hhHH----HHHHcCCCEEEeCCCC----cHHHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLA----VCKDLGADVCINYKTE----DFVARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~---------~~~~----~~~~~g~~~~~~~~~~----~~~~~~~ 201 (274)
.|++++|+|+++|+|.++++.+.+.|++|++.+++. ++++ ++++.+...+.|..+. .+.+.+.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999987654 3333 3334455555555443 2344444
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+.++ ++|++|||+|.
T Consensus 87 ~~~G--~iDiLVnNAGi 101 (604)
T 2et6_A 87 KNFG--TVHVIINNAGI 101 (604)
T ss_dssp HHHS--CCCEEEECCCC
T ss_pred HHcC--CCCEEEECCCC
Confidence 5554 49999999994
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.3e-05 Score=63.55 Aligned_cols=96 Identities=15% Similarity=0.284 Sum_probs=63.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+++||+|++|.+|..+++.+.+.|++|++++|++++.+.+. .....+..+-.+ .+.+.+... ++|+||+++|...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d-~~~~~~~~~--~~d~vi~~a~~~~ 79 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSS-LDEVCEVCK--GADAVISAFNPGW 79 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTC-HHHHHHHHT--TCSEEEECCCC--
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCC-HHHHHHHhc--CCCEEEEeCcCCC
Confidence 68999999999999999999999999999999987653221 111222222222 334444444 4999999998531
Q ss_pred ------------HHHhhhccccC--CEEEEEecCC
Q 024011 221 ------------FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 221 ------------~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
....++.+++. .+++.++...
T Consensus 80 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 80 NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ----CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 22344444433 4899888755
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.08 E-value=6.5e-07 Score=72.77 Aligned_cols=72 Identities=26% Similarity=0.335 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcHHH----HHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVA----RVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~----~~~~~~~~~~~d~v 212 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++. ...+ |..+.+..+ .+.+..+ ++|++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g--~iD~l 91 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHG--PVEVL 91 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTC--SCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 47899999999999999999999999999999998765432 2222 444433222 2233333 48999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 92 v~nAg~ 97 (253)
T 2nm0_A 92 IANAGV 97 (253)
T ss_dssp EEECSC
T ss_pred EECCCC
Confidence 999984
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.07 E-value=9.2e-06 Score=66.22 Aligned_cols=81 Identities=20% Similarity=0.292 Sum_probs=54.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC---CeEEEEecChhhHHHHHH---cCCCE-E--EeCCCCcHHHH----HHHHh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCKD---LGADV-C--INYKTEDFVAR----VKEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g---~~v~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~----~~~~~ 204 (274)
..++++||+|++|++|.++++.+.+.| ++|++++|+.++.+.+++ .+... . .|..+.+..+. +.+..
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 457899999999999999999999999 999999998775443332 23322 2 24444333332 23333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+..++|++|+|+|.
T Consensus 99 g~~~id~li~~Ag~ 112 (267)
T 1sny_A 99 KDQGLNVLFNNAGI 112 (267)
T ss_dssp GGGCCSEEEECCCC
T ss_pred CCCCccEEEECCCc
Confidence 31249999999983
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.4e-05 Score=64.79 Aligned_cols=77 Identities=23% Similarity=0.305 Sum_probs=54.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHH----HHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFV----ARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~ 209 (274)
|+++||+|+++++|.++++.+.+.| ++|++++|++++++.+. +++.... .|..+.+.. +.+.+..+ ++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i 79 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG--KI 79 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS--CC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC--Cc
Confidence 6899999999999999999888774 78999999988876664 3343322 244443322 23333333 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 80 d~lvnnAg~ 88 (254)
T 3kzv_A 80 DSLVANAGV 88 (254)
T ss_dssp CEEEEECCC
T ss_pred cEEEECCcc
Confidence 999999984
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.9e-05 Score=63.37 Aligned_cols=77 Identities=22% Similarity=0.301 Sum_probs=53.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH----HcCCC-EE-E--eCCCCcHHHH----HHHHhCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGAD-VC-I--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~----~~g~~-~~-~--~~~~~~~~~~----~~~~~~~ 206 (274)
+++++|+|++|++|..+++.+.+.|++|+++ +|+.++.+.+. +.+.. .. + |..+.+..+. +.+..+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG- 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT-
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC-
Confidence 4789999999999999999999999999998 78877665432 23433 22 2 4443332222 222333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 80 -~~d~li~~Ag~ 90 (245)
T 2ph3_A 80 -GLDTLVNNAGI 90 (245)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999983
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.06 E-value=2.7e-05 Score=64.24 Aligned_cols=78 Identities=15% Similarity=0.281 Sum_probs=53.7
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChh---hHHHHHH-cCCCEE--EeCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVC--INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~-~g~~~~--~~~~~~~~~~~----~~~~~~~ 206 (274)
.|+++||+|++ +++|.++++.+.+.|++|++++|+++ .++.+.+ .+.... .|..+.+..+. +.+..+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g- 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG- 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 57899999998 89999999999999999999999875 3333332 332222 24444332222 223333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 99 -~iD~lv~~Ag~ 109 (285)
T 2p91_A 99 -SLDIIVHSIAY 109 (285)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999983
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.5e-05 Score=63.92 Aligned_cols=79 Identities=28% Similarity=0.398 Sum_probs=54.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHH----HHcCCCEE-E--eCCCCcHH----HHHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADVC-I--NYKTEDFV----ARVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~~-~--~~~~~~~~----~~~~~~~~ 205 (274)
..++++||+|+++++|.++++.+.+.|++|+++ .++.+..+.+ ++.+.... + |..+.+.. +.+.+..+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999887 6666655443 23343322 2 43333222 23333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 104 --~id~li~nAg~ 114 (272)
T 4e3z_A 104 --RLDGLVNNAGI 114 (272)
T ss_dssp --CCCEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 49999999984
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.8e-05 Score=64.19 Aligned_cols=78 Identities=23% Similarity=0.318 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE---EeCCCCcHHHHHHHHh-CCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC---INYKTEDFVARVKEET-GGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~-~~~~~d~vi~ 214 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++. .++++.... .|..+.+..+.+.+.. .-.++|++|+
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~ 85 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN 85 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 478999999999999999999999999999999865543 334444322 2444433333222211 1124999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 86 nAg~ 89 (257)
T 3tl3_A 86 CAGT 89 (257)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 9984
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.2e-05 Score=65.95 Aligned_cols=78 Identities=22% Similarity=0.246 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~----~~~~~~~~ 207 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++.+.+. +.+... .+ |..+.+..+. +.+..+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-- 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG-- 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC--
Confidence 4789999999999999999999999999999999876554332 234332 22 3333322222 222333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+++|.
T Consensus 111 ~id~li~~Ag~ 121 (279)
T 3ctm_A 111 TIDVFVANAGV 121 (279)
T ss_dssp CCSEEEECGGG
T ss_pred CCCEEEECCcc
Confidence 48999999984
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.02 E-value=9.4e-06 Score=66.13 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE-EEeCCCCcHH----HHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFV----ARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~----~~~~~~~~~~~~d~vi 213 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++.+.. .... ..|..+.+.. +++.+..+ ++|++|
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD~lv 101 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAGDISKPETADRIVREGIERFG--RIDSLV 101 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEESCTTSHHHHHHHHHHHHHHHS--CCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEccCCCHHHHHHHHHHHHHHCC--CCCEEE
Confidence 478999999999999999999999999999999986643211 1111 1244433322 23333343 499999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 102 ~nAg~ 106 (260)
T 3un1_A 102 NNAGV 106 (260)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99984
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=63.96 Aligned_cols=78 Identities=21% Similarity=0.352 Sum_probs=51.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHH----HHcCCCEE-E--eCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADVC-I--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~~-~--~~~~~~~~~~----~~~~~~~ 206 (274)
.++++||+|++|++|.++++.+.+.|++|+++ .|+++..+.+ ++.+.... + |..+.+..+. +.+..+
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 82 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG- 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence 47899999999999999999999999999998 5665554333 33343322 2 3333322222 222333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 83 -~~d~vi~~Ag~ 93 (247)
T 2hq1_A 83 -RIDILVNNAGI 93 (247)
T ss_dssp -CCCEEEECC--
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.3e-05 Score=64.32 Aligned_cols=76 Identities=25% Similarity=0.274 Sum_probs=51.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcH----HHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDF----VARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~ 211 (274)
..++++||+|+++++|.++++.+.+.|++|++++|++++.+ .....+ |..+.+. .+.+.+..+..++|+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~ 79 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 79 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence 45789999999999999999999999999999999876532 111122 2222222 222233332135999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 80 lv~~Ag~ 86 (241)
T 1dhr_A 80 ILCVAGG 86 (241)
T ss_dssp EEECCCC
T ss_pred EEEcccc
Confidence 9999983
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.01 E-value=6.4e-06 Score=66.39 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH--HHHHHHhCC-CCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV--ARVKEETGG-KGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~-~~~d~vi~~ 215 (274)
.++++||+|+++++|.++++.+.+ |++|++++|++++++.+.+......+..+..+.. +.+.+.... .++|++|+|
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 478999999999999999999887 9999999999998877766433222222211100 000111111 258999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 83 Ag~ 85 (245)
T 3e9n_A 83 AAV 85 (245)
T ss_dssp C--
T ss_pred CCc
Confidence 985
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.00 E-value=2e-05 Score=63.29 Aligned_cols=77 Identities=19% Similarity=0.227 Sum_probs=53.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecChhhHHHHHH----cCCCE-EE--eCCCCcHHHH----HH
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-------RVFVTAGSEEKLAVCKD----LGADV-CI--NYKTEDFVAR----VK 201 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-------~v~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~~~~~----~~ 201 (274)
++++||+|++|++|.++++.+.+.|+ +|++++|+.++++.+.+ .+... .+ |..+.+..+. +.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999 99999999887655432 23322 22 3333322222 22
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|+|+|.
T Consensus 82 ~~~g--~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYG--HIDCLVNNAGV 96 (244)
T ss_dssp HHTS--CCSEEEECCCC
T ss_pred HhCC--CCCEEEEcCCc
Confidence 2232 49999999983
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=2.7e-05 Score=63.56 Aligned_cols=78 Identities=27% Similarity=0.339 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~~~~~----~~~~~~~ 206 (274)
.++++||+|++|++|.++++.+.+.|++|++++| +.++.+.+ ++.+.... + |..+.+..+. +.+..+
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 98 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG- 98 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999999998 66655433 33454322 2 4333322222 222333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 99 -~~d~vi~~Ag~ 109 (274)
T 1ja9_A 99 -GLDFVMSNSGM 109 (274)
T ss_dssp -CEEEEECCCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999983
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=97.98 E-value=4.6e-05 Score=62.27 Aligned_cols=79 Identities=22% Similarity=0.357 Sum_probs=52.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCC-EE--EeCCCCcH----HHHHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGAD-VC--INYKTEDF----VARVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~-~~--~~~~~~~~----~~~~~~~~~ 205 (274)
..+++++|+|+++++|.++++.+.+.|++|++++ ++.+..+.. ++.+.. .. .|..+.+. .+.+.+..+
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999998 454444332 223332 22 24444332 233333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 103 --~id~li~nAg~ 113 (269)
T 3gk3_A 103 --KVDVLINNAGI 113 (269)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCCc
Confidence 49999999984
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.4e-05 Score=60.92 Aligned_cols=63 Identities=21% Similarity=0.331 Sum_probs=47.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+++|+|++|++|..+++.+. .|++|++++|+.+ ....|..+.+..+.+.+.. .++|++|+++|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence 79999999999999999999 9999999998864 2334444444344444433 24899999998
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.98 E-value=1.9e-05 Score=63.37 Aligned_cols=77 Identities=23% Similarity=0.287 Sum_probs=52.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
|++++|+|++|++|..+++.+.+.|++|+++ .|++++.+.+. +.+.... .|..+.+..+.+ .+..+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG-- 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS--
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC--
Confidence 5789999999999999999999999999985 78876654432 2343221 243333222222 22222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 79 ~id~li~~Ag~ 89 (244)
T 1edo_A 79 TIDVVVNNAGI 89 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 49999999983
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.6e-05 Score=65.62 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=65.3
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS- 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~- 219 (274)
+|||+|++|.+|..+++.+... |.+|++++|+.++.+.+...+... +..+-.+ .+.+.+... ++|+||++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~-~~~D~~d-~~~l~~~~~--~~d~vi~~a~~~~ 77 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSV-RQLDYFN-QESMVEAFK--GMDTVVFIPSIIH 77 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEE-EECCTTC-HHHHHHHTT--TCSEEEECCCCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEE-EEcCCCC-HHHHHHHHh--CCCEEEEeCCCCc
Confidence 5899999999999999999887 999999999988755443333332 2222222 234455544 599999999842
Q ss_pred -------hHHHhhhccccC--CEEEEEecCC
Q 024011 220 -------YFQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 220 -------~~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
.....++.++.. ++++.++..+
T Consensus 78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 78 PSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred cchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 123445555443 4899888765
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.8e-05 Score=62.84 Aligned_cols=73 Identities=21% Similarity=0.229 Sum_probs=51.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHH----HHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARV----KEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~----~~~~~~~~~d~v 212 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.+. ++.+ ... .|..+.+..+.+ .+..+ ++|++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~-~~~~~~D~~d~~~~~~~~~~~~~~~g--~id~l 78 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYP-FATEVMDVADAAQVAQVCQRLLAETE--RLDAL 78 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCS-SEEEECCTTCHHHHHHHHHHHHHHCS--CCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCC-ceEEEcCCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 47899999999999999999999999999999988653 1223 222 244443322222 22232 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 79 v~~Ag~ 84 (250)
T 2fwm_X 79 VNAAGI 84 (250)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999984
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=97.95 E-value=5.3e-06 Score=66.97 Aligned_cols=71 Identities=23% Similarity=0.308 Sum_probs=47.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++||+|++|++|..+++.+.+.|++|++++|+.++.+. ....|..+.+..+.+.+.. ..++|+||+++|.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------cccCCcccHHHHHHHHHHc-CCCccEEEECCCC
Confidence 479999999999999999999999999999998664321 1001111111122222222 1259999999984
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.7e-05 Score=64.61 Aligned_cols=77 Identities=17% Similarity=0.270 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHH----cCCCE-E--EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKD----LGADV-C--INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~----~g~~~-~--~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+++++|.++++.+.+.|++|++++++.+. .+.+++ .+... . .|..+.+..+ .+.+..+
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g- 84 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG- 84 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC-
Confidence 46899999999999999999999999999999766543 343332 22222 2 2444433222 2333333
Q ss_pred CCccEEEECCC
Q 024011 207 KGVDVILDCMG 217 (274)
Q Consensus 207 ~~~d~vi~~~g 217 (274)
++|++|+|+|
T Consensus 85 -~id~lv~~Ag 94 (264)
T 3i4f_A 85 -KIDFLINNAG 94 (264)
T ss_dssp -CCCEEECCCC
T ss_pred -CCCEEEECCc
Confidence 4999999999
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=2.9e-05 Score=62.36 Aligned_cols=74 Identities=18% Similarity=0.077 Sum_probs=53.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|..+++.+.+. |++|++++|++++.+.+ ..+...+ .|..+ .+.+.+... ++|+||++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d---~~~~~~~~~--~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITD---ADSINPAFQ--GIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTS---HHHHHHHHT--TCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCC---HHHHHHHHc--CCCEEEEe
Confidence 4689999999999999999999998 89999999998766543 1122222 23333 233444443 48999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 77 a~~ 79 (253)
T 1xq6_A 77 TSA 79 (253)
T ss_dssp CCC
T ss_pred ccc
Confidence 873
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=4e-05 Score=57.18 Aligned_cols=82 Identities=13% Similarity=0.222 Sum_probs=58.0
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
....++++++|+|+ |.+|..+++.++..|++|+++++++++.+.++ +.+... +..+..+ .+.+.+. ...++|+||
T Consensus 14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~~-~~~l~~~-~~~~ad~Vi 89 (155)
T 2g1u_A 14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFT-VVGDAAE-FETLKEC-GMEKADMVF 89 (155)
T ss_dssp ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEE-EESCTTS-HHHHHTT-TGGGCSEEE
T ss_pred hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcE-EEecCCC-HHHHHHc-CcccCCEEE
Confidence 34567889999997 99999999999999999999999998887766 555543 3333222 2223221 223589999
Q ss_pred ECCChhh
Q 024011 214 DCMGASY 220 (274)
Q Consensus 214 ~~~g~~~ 220 (274)
.+++...
T Consensus 90 ~~~~~~~ 96 (155)
T 2g1u_A 90 AFTNDDS 96 (155)
T ss_dssp ECSSCHH
T ss_pred EEeCCcH
Confidence 9999754
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=7.9e-05 Score=61.55 Aligned_cols=99 Identities=12% Similarity=0.128 Sum_probs=64.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc----CCC-EEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD-VCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
-+|++++|+|++|++|.+++..+.+.|++|+++.|+.++.+.+. ++ +.. ...|..+. +.+.+... .+|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~Dv 191 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASRAEAVK--GAHF 191 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHHHHHTT--TCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH---HHHHHHHH--hCCE
Confidence 36899999998899999999999999999999999987765443 22 222 22344332 23334333 3899
Q ss_pred EEECCChhh--H-HHhhhccccCCEEEEEecCC
Q 024011 212 ILDCMGASY--F-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 212 vi~~~g~~~--~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
+|||+|... . ...+..+..+-.++.+....
T Consensus 192 lVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~ 224 (287)
T 1lu9_A 192 VFTAGAIGLELLPQAAWQNESSIEIVADYNAQP 224 (287)
T ss_dssp EEECCCTTCCSBCHHHHTTCTTCCEEEECCCSS
T ss_pred EEECCCccccCCChhHcCchHHHHHHHHhhhhh
Confidence 999997421 1 11223335555666665543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.93 E-value=9.4e-06 Score=68.47 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=52.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHc------CCC-EE--EeCCCCcHHHHHHHHhCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDL------GAD-VC--INYKTEDFVARVKEETGG 206 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~------g~~-~~--~~~~~~~~~~~~~~~~~~ 206 (274)
++++||+|+++++|.++++.+.+.|++|+++.++.+++ +.++.. +.. .. .|..+.+..+.+.+....
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 67899999999999999999999999988877654332 222222 122 22 244443333444333323
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 82 g~iD~lVnnAG~ 93 (327)
T 1jtv_A 82 GRVDVLVCNAGL 93 (327)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 459999999983
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00018 Score=60.81 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh----hHHHHHHc------CCCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCKDL------GADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
.+++|||+||+|.+|..+++.+.+.|++|++++|+.. .++.+... ..-..+..+-.+ .+.+.+... +
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~ 100 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD-LTTCEQVMK--G 100 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC-HHHHHHHTT--T
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC-HHHHHHHhc--C
Confidence 3689999999999999999999999999999998543 33333332 222233333322 234444444 5
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||++++.
T Consensus 101 ~d~Vih~A~~ 110 (351)
T 3ruf_A 101 VDHVLHQAAL 110 (351)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999984
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00013 Score=60.45 Aligned_cols=93 Identities=18% Similarity=0.199 Sum_probs=70.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|++++|.|. |.+|..+++.++..|++|++.+++.++.+.+.++|.... +. .+ +.+... ..|+|++++.
T Consensus 153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~--~~----l~~~l~--~aDvVi~~~p 222 (293)
T 3d4o_A 153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-HI--SK----AAQELR--DVDVCINTIP 222 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-EG--GG----HHHHTT--TCSEEEECCS
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-Ch--hh----HHHHhc--CCCEEEECCC
Confidence 46899999996 999999999999999999999999888777777776532 21 12 222332 4899999987
Q ss_pred hhh-HHHhhhccccCCEEEEEecC
Q 024011 218 ASY-FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~-~~~~~~~l~~~g~~v~~g~~ 240 (274)
... ....++.+++++.++.++..
T Consensus 223 ~~~i~~~~l~~mk~~~~lin~ar~ 246 (293)
T 3d4o_A 223 ALVVTANVLAEMPSHTFVIDLASK 246 (293)
T ss_dssp SCCBCHHHHHHSCTTCEEEECSST
T ss_pred hHHhCHHHHHhcCCCCEEEEecCC
Confidence 533 24567788999999988764
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.92 E-value=2.7e-05 Score=63.45 Aligned_cols=78 Identities=23% Similarity=0.270 Sum_probs=53.1
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhhH-----HHHH-HcCCCEE---EeCCCCcH----HHHHHHH
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL-----AVCK-DLGADVC---INYKTEDF----VARVKEE 203 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~-----~~~~-~~g~~~~---~~~~~~~~----~~~~~~~ 203 (274)
.+++++|+|++ +++|.++++.+.+.|++|++++++.++. +.+. ..+.... .|..+.+. .+.+.+.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 47999999998 8999999999999999999998775432 2232 2343332 23333322 2333333
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
.+ ++|++|+|+|.
T Consensus 99 ~g--~id~li~nAg~ 111 (267)
T 3gdg_A 99 FG--QIDAFIANAGA 111 (267)
T ss_dssp TS--CCSEEEECCCC
T ss_pred cC--CCCEEEECCCc
Confidence 33 49999999984
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.92 E-value=5.1e-05 Score=69.25 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-h-hHHHHHHcCCCEEEeC-CC----CcHHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-E-KLAVCKDLGADVCINY-KT----EDFVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~-~~~~~~~~g~~~~~~~-~~----~~~~~~~~~~~~~~~~d~ 211 (274)
.|++++|+|+++|||.++++.+.+.|++|++.+++. + ..+++++.+....... +. +...+.+.+.++ ++|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G--~iDi 398 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYG--TIDI 398 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHS--CCCE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcC--CCCE
Confidence 478999999999999999999999999999988532 2 2344555555433322 22 123334444444 4999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|||+|.
T Consensus 399 LVnNAGi 405 (604)
T 2et6_A 399 LVNNAGI 405 (604)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999994
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=3e-05 Score=60.29 Aligned_cols=97 Identities=11% Similarity=0.133 Sum_probs=63.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
++++|+|++|.+|..+++.+.+.|++|++++|++++.+.....+ ...+..+-.+ .+.+.+... ++|+||+++|...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~D~~~-~~~~~~~~~--~~d~vi~~a~~~~ 79 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP-AHVVVGDVLQ-AADVDKTVA--GQDAVIVLLGTRN 79 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCC-SEEEESCTTS-HHHHHHHHT--TCSEEEECCCCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCc-eEEEEecCCC-HHHHHHHHc--CCCEEEECccCCC
Confidence 78999999999999999999999999999999887643221111 2233333222 233444443 4899999998421
Q ss_pred -----------HHHhhhcccc--CCEEEEEecCC
Q 024011 221 -----------FQRNLGSLNI--DGRLFIIGTQG 241 (274)
Q Consensus 221 -----------~~~~~~~l~~--~g~~v~~g~~~ 241 (274)
....++.+.+ .++++.++...
T Consensus 80 ~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~ 113 (206)
T 1hdo_A 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113 (206)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred CCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence 2233344432 35888887654
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.92 E-value=2e-05 Score=72.14 Aligned_cols=80 Identities=21% Similarity=0.293 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---------ChhhHH----HHHHcCCCEEEeCCCCcHHHHHHHHh-
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---------SEEKLA----VCKDLGADVCINYKTEDFVARVKEET- 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---------~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~- 204 (274)
.|+++||+|++++||.++++.+.+.|++|+++++ +.++++ .+++.+.....|..+.+..+.+.+..
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~ 97 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999999877 444433 33455666666665543333333221
Q ss_pred CC-CCccEEEECCCh
Q 024011 205 GG-KGVDVILDCMGA 218 (274)
Q Consensus 205 ~~-~~~d~vi~~~g~ 218 (274)
.. .++|++|||+|.
T Consensus 98 ~~~g~iDiLVnnAGi 112 (613)
T 3oml_A 98 KAFGRVDILVNNAGI 112 (613)
T ss_dssp -------CEECCCCC
T ss_pred HHCCCCcEEEECCCC
Confidence 11 248999999984
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=5.4e-05 Score=65.70 Aligned_cols=83 Identities=14% Similarity=0.093 Sum_probs=55.4
Q ss_pred hcCCCCCCEEEEecCCchHHHH--HHHHHHHcCCeEEEEecChh---------------hH-HHHHHcCCCEE---EeCC
Q 024011 134 TSHLSPGESFLVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEE---------------KL-AVCKDLGADVC---INYK 192 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~--~~~~~~~~g~~v~~~~~~~~---------------~~-~~~~~~g~~~~---~~~~ 192 (274)
...+..|+++||+|+++|+|.+ ++..+.+.|++|++++++.+ .+ +.+++.+.... .|..
T Consensus 54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt 133 (418)
T 4eue_A 54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF 133 (418)
T ss_dssp SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence 3445779999999999999999 77777778999999987532 22 23344554432 2444
Q ss_pred CCcHHH----HHHHHhCCCCccEEEECCCh
Q 024011 193 TEDFVA----RVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 193 ~~~~~~----~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+..+ .+.+.. .++|++|+|+|.
T Consensus 134 d~~~v~~~v~~i~~~~--G~IDiLVnNAG~ 161 (418)
T 4eue_A 134 SNETKDKVIKYIKDEF--GKIDLFVYSLAA 161 (418)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHc--CCCCEEEECCcc
Confidence 433333 333333 359999999985
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.90 E-value=3.7e-05 Score=62.43 Aligned_cols=78 Identities=18% Similarity=0.298 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-HH----HcCCCEE---EeCCCCcHHHHH----HHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CK----DLGADVC---INYKTEDFVARV----KEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~ 206 (274)
.++++||+|++|++|.++++.+.+.|++|++++|+.++.+. ++ +.+.... .|..+.+..+.+ .+..
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 90 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-- 90 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc--
Confidence 47899999999999999999999999999999986554322 22 2243322 244443322222 2223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+++|.
T Consensus 91 ~~id~li~~Ag~ 102 (265)
T 1h5q_A 91 GPISGLIANAGV 102 (265)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 249999999984
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.89 E-value=1.8e-05 Score=66.78 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=31.6
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCh
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.++++||+|+++ |||.++++.+.+.|++|+++++++
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~ 38 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence 368999999875 999999999999999999887665
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.88 E-value=6.1e-05 Score=67.32 Aligned_cols=79 Identities=18% Similarity=0.297 Sum_probs=55.3
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhh---H----HHHHHcCCCEE---EeCCCCcHHHHHHHHhC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---L----AVCKDLGADVC---INYKTEDFVARVKEETG 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~---~----~~~~~~g~~~~---~~~~~~~~~~~~~~~~~ 205 (274)
+++++++||+|++|++|..+++.+.+.|+ +|++++|+... . +.+++.+.... .|..+.+....+.+.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence 46789999999999999999999999999 68889988631 2 33444554332 233443333333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..+|+||+|+|.
T Consensus 334 -~~ld~VVh~AGv 345 (511)
T 2z5l_A 334 -YPPNAVFHTAGI 345 (511)
T ss_dssp -SCCSEEEECCCC
T ss_pred -CCCcEEEECCcc
Confidence 459999999984
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1.5e-05 Score=65.12 Aligned_cols=71 Identities=20% Similarity=0.219 Sum_probs=50.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++||+|++|++|..+++.+.+.|++|++++|++.+.+ +.. ..+..+-.+ .+.+.+... ++|+||+++|.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~~Ag~ 74 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----GPNEECVQCDLAD-ANAVNAMVA--GCDGIVHLGGI 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----CTTEEEEECCTTC-HHHHHHHHT--TCSEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----CCCCEEEEcCCCC-HHHHHHHHc--CCCEEEECCCC
Confidence 578999999999999999999999999999999876543 222 222222222 233444443 49999999984
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=8.7e-05 Score=60.48 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=51.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~ 206 (274)
.++++||+|+++++|.++++.+.+.|++|++.. ++.++.+.. ++.+... .+ |..+.+.. +.+.+..+
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g- 103 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG- 103 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC-
Confidence 468999999999999999999999999997755 555544332 3334332 22 33333222 22233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 104 -~id~li~nAg~ 114 (267)
T 4iiu_A 104 -AWYGVVSNAGI 114 (267)
T ss_dssp -CCSEEEECCCC
T ss_pred -CccEEEECCCC
Confidence 49999999984
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0001 Score=62.53 Aligned_cols=78 Identities=15% Similarity=0.212 Sum_probs=55.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CC-eEEEEecChhhHHHHHH-cC--CCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKD-LG--ADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~-~v~~~~~~~~~~~~~~~-~g--~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
-.+++|||+|++|.+|..+++.+.+. |. +|++++|++.+.+.+.+ +. .-..+..+-.+ .+.+.+... ++|+|
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~--~~D~V 95 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD-LERLNYALE--GVDIC 95 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC-HHHHHHHTT--TCSEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC-HHHHHHHHh--cCCEE
Confidence 35789999999999999999999988 98 99999999887665542 22 11222223222 234444443 59999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 96 ih~Aa~ 101 (344)
T 2gn4_A 96 IHAAAL 101 (344)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=4.4e-05 Score=67.06 Aligned_cols=90 Identities=19% Similarity=0.196 Sum_probs=69.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|++++|+|+ |++|.++++.++..|++|+++++++.+.+.+...+.+. .+. + +.. ..+|+++.+.|
T Consensus 263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~l--e-------e~~--~~aDvVi~atG 329 (488)
T 3ond_A 263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTL--E-------DVV--SEADIFVTTTG 329 (488)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCG--G-------GTT--TTCSEEEECSS
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCH--H-------HHH--HhcCEEEeCCC
Confidence 47999999997 69999999999999999999999988877776666532 111 1 111 24899999998
Q ss_pred hhh--HHHhhhccccCCEEEEEecC
Q 024011 218 ASY--FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~--~~~~~~~l~~~g~~v~~g~~ 240 (274)
... ....++.+++++.++.+|..
T Consensus 330 ~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 330 NKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp CSCSBCHHHHTTSCTTEEEEESSST
T ss_pred ChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 643 34578889998888888764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.5e-05 Score=65.01 Aligned_cols=77 Identities=14% Similarity=0.166 Sum_probs=51.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHc-CC-CEEE--eCCCCcHHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDL-GA-DVCI--NYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~-g~-~~~~--~~~~~~~~~~~~~~~~~~~~d 210 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+.+.. +.+.+. +. ...+ |..+.+. +.+.....++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERA---LARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHH---HHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHH---HHHHHhccCCc
Confidence 467999999999999999999999999999999875543 222221 22 2222 3333322 33322223599
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
+||++++.
T Consensus 81 ~vih~A~~ 88 (341)
T 3enk_A 81 AAIHFAAL 88 (341)
T ss_dssp EEEECCCC
T ss_pred EEEECccc
Confidence 99999984
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00014 Score=60.47 Aligned_cols=93 Identities=19% Similarity=0.243 Sum_probs=70.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|++++|.|+ |.+|..+++.++..|++|++.+++.++.+.+.+++... .+. .+ +.+... ..|+|++++.
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~~--~~----l~~~l~--~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVP-FHT--DE----LKEHVK--DIDICINTIP 224 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEE-EEG--GG----HHHHST--TCSEEEECCS
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeE-Ech--hh----HHHHhh--CCCEEEECCC
Confidence 46899999997 99999999999999999999999988877776766542 221 12 223332 4899999988
Q ss_pred hhhH-HHhhhccccCCEEEEEecC
Q 024011 218 ASYF-QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~~-~~~~~~l~~~g~~v~~g~~ 240 (274)
...+ ...++.+++++.++.++..
T Consensus 225 ~~~i~~~~~~~mk~g~~lin~a~g 248 (300)
T 2rir_A 225 SMILNQTVLSSMTPKTLILDLASR 248 (300)
T ss_dssp SCCBCHHHHTTSCTTCEEEECSST
T ss_pred hhhhCHHHHHhCCCCCEEEEEeCC
Confidence 6432 3467889999999998864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=97.83 E-value=8.2e-06 Score=65.43 Aligned_cols=98 Identities=14% Similarity=0.213 Sum_probs=62.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++++|+|++|++|..+++.+.+.|+ +|++++|++++.+.........+ .|..+.+ .+.+... ++|+||+|+
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~vi~~a 92 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD---DYASAFQ--GHDVGFCCL 92 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGG---GGGGGGS--SCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHH---HHHHHhc--CCCEEEECC
Confidence 68999999999999999999999999 99999998765432211122111 2222221 2233333 599999999
Q ss_pred Chhh---------------HHHhhhcccc--CCEEEEEecCCC
Q 024011 217 GASY---------------FQRNLGSLNI--DGRLFIIGTQGG 242 (274)
Q Consensus 217 g~~~---------------~~~~~~~l~~--~g~~v~~g~~~~ 242 (274)
|... ....++.+.+ .++++.++....
T Consensus 93 g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (242)
T 2bka_A 93 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 135 (242)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence 8521 1123333432 368998887654
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00044 Score=59.67 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=74.3
Q ss_pred HHHHHHhhc-CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTS-HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~-~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
.+.++.+.. ..-.|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|... . ++ .+...
T Consensus 206 ~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~-----~L----eeal~ 274 (435)
T 3gvp_A 206 ILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-V-----KL----NEVIR 274 (435)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-C-----CH----HHHTT
T ss_pred HHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-c-----cH----HHHHh
Confidence 344444433 3457999999997 99999999999999999999999887666666666432 1 12 22332
Q ss_pred CCCccEEEECCChhh-H-HHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGASY-F-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~-~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
..|+|+.|.|... + ...++.|++++.++.+|...
T Consensus 275 --~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 275 --QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp --TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred --cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence 3899999987543 3 47789999999888887653
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00013 Score=64.82 Aligned_cols=78 Identities=24% Similarity=0.319 Sum_probs=54.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh---h----HHHHHHcCCCEEE---eCCCCcHHHHHHHHhC-CCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE---K----LAVCKDLGADVCI---NYKTEDFVARVKEETG-GKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~---~----~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~-~~~ 208 (274)
+++||+|++|+||..+++.+.+.|+ +++++.|+.. . .+.+++.|..... |..+.+....+.+... ..+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ 319 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP 319 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999 8888888632 1 2344556654332 4444333444433322 236
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||+|+|.
T Consensus 320 ld~vVh~AGv 329 (496)
T 3mje_A 320 LTAVFHSAGV 329 (496)
T ss_dssp EEEEEECCCC
T ss_pred CeEEEECCcc
Confidence 8999999985
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=97.80 E-value=5.6e-05 Score=63.61 Aligned_cols=100 Identities=17% Similarity=0.116 Sum_probs=64.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-----CCCE-EE---eCCCCcHHHHHHHHhCCC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-----GADV-CI---NYKTEDFVARVKEETGGK 207 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-----g~~~-~~---~~~~~~~~~~~~~~~~~~ 207 (274)
..+++++||+|++|.+|..+++.+.+.|++|++++|+.++.+.+.+. +... .+ |..+.+. +.+...
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~-- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA---YDEVIK-- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT---TTTTTT--
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH---HHHHHc--
Confidence 34578999999999999999999999999999999988766544321 2222 12 3332221 222222
Q ss_pred CccEEEECCChhh---------------HHHhhhccc--c-CCEEEEEecCC
Q 024011 208 GVDVILDCMGASY---------------FQRNLGSLN--I-DGRLFIIGTQG 241 (274)
Q Consensus 208 ~~d~vi~~~g~~~---------------~~~~~~~l~--~-~g~~v~~g~~~ 241 (274)
++|+||++++... ....++.+. . .++++.+++..
T Consensus 83 ~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 5899999997421 112334333 2 36899887653
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00018 Score=58.98 Aligned_cols=99 Identities=19% Similarity=0.289 Sum_probs=68.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCC--CEEEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGA--DVCINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~--~~~~~~~~~~~~~~~~~~~ 204 (274)
....++++++||-.|++ .|..+..+++.. +.+++.++.+++.++.+++ .+. ...+. ..++.+ ..
T Consensus 106 ~~~~~~~~~~VLDiG~G--~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~----~~ 177 (277)
T 1o54_A 106 MMLDVKEGDRIIDTGVG--SGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIK--VRDISE----GF 177 (277)
T ss_dssp HHTTCCTTCEEEEECCT--TSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEE--CCCGGG----CC
T ss_pred HHhCCCCCCEEEEECCc--CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE--ECCHHH----cc
Confidence 55678899999999973 388888888875 5799999999988777653 343 11111 112111 12
Q ss_pred CCCCccEEEECCChh--hHHHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (274)
....+|+|+.+.... .+..+.+.|+++|++++...
T Consensus 178 ~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 178 DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 234599999876643 47788899999999998764
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.79 E-value=7.5e-05 Score=65.79 Aligned_cols=80 Identities=21% Similarity=0.383 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HH-HHHHcCCCEE-EeCCCCcHHHHHHHHh---CCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LA-VCKDLGADVC-INYKTEDFVARVKEET---GGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~---~~~~~d~ 211 (274)
+++++||+|++++||.++++.+.+.|++|++++++... ++ ...+.+...+ .|..+.+..+.+.+.. .+..+|+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 57899999999999999999999999999999986432 22 2334454332 3555544444433321 1123999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 292 lV~nAGv 298 (454)
T 3u0b_A 292 LVNNAGI 298 (454)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999984
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=97.79 E-value=6.6e-05 Score=61.66 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=65.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++||+|++|.+|..+++.+.+. |++|++++|+.++.+.+...+... +..+-.+ .+.+.+... ++|+||++++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~D~~d-~~~l~~~~~--~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEV-RHGDYNQ-PESLQKAFA--GVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEE-EECCTTC-HHHHHHHTT--TCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeE-EEeccCC-HHHHHHHHh--cCCEEEEcCCC
Confidence 36899999999999999999988 999999999887766555444433 2222222 234444443 48999999984
Q ss_pred h--------hHHHhhhccccC--CEEEEEecCC
Q 024011 219 S--------YFQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 219 ~--------~~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
. .....++.+... .+++.++...
T Consensus 77 ~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 77 HYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred CcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 1 122334444333 4888887654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=97.77 E-value=8.5e-05 Score=66.64 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=55.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEE-ecCh-------------hh----HHHHHHcCCCEE---EeCCCC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVT-AGSE-------------EK----LAVCKDLGADVC---INYKTE 194 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~-~~~~-------------~~----~~~~~~~g~~~~---~~~~~~ 194 (274)
+++++++||+|++|+||..+++.+.+.|++ ++++ .|+. ++ .+.+++.|.... .|..+.
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~ 327 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA 327 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence 567899999999999999999999999996 6666 7772 22 233445565433 244443
Q ss_pred cHHHHHHHHh-CCCCccEEEECCCh
Q 024011 195 DFVARVKEET-GGKGVDVILDCMGA 218 (274)
Q Consensus 195 ~~~~~~~~~~-~~~~~d~vi~~~g~ 218 (274)
+....+.+.. ...++|.||+|+|.
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv 352 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPT 352 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcC
Confidence 3334443322 12358999999984
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00011 Score=60.34 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=63.6
Q ss_pred EEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
++||+|++|.+|..+++.+.+. |++|++++|++++.+.+...+... +..+-.+ .+.+.+... ++|+||++++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~D~~d-~~~~~~~~~--~~d~vi~~a~~~ 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITV-RQADYGD-EAALTSALQ--GVEKLLLISSSE 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEE-EECCTTC-HHHHHHHTT--TCSEEEECC---
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeE-EEcCCCC-HHHHHHHHh--CCCEEEEeCCCC
Confidence 4899999999999999999988 999999999887766555444433 2222222 233444443 489999999842
Q ss_pred ------hHHHhhhcccc--CCEEEEEecCCC
Q 024011 220 ------YFQRNLGSLNI--DGRLFIIGTQGG 242 (274)
Q Consensus 220 ------~~~~~~~~l~~--~g~~v~~g~~~~ 242 (274)
.....++.+.. -++++.++....
T Consensus 77 ~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 107 (286)
T 2zcu_A 77 VGQRAPQHRNVINAAKAAGVKFIAYTSLLHA 107 (286)
T ss_dssp -----CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 12334444433 258888877553
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00042 Score=59.93 Aligned_cols=110 Identities=18% Similarity=0.148 Sum_probs=80.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|.... + +.+... ..|+|+.+.+
T Consensus 209 L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------s----L~eal~--~ADVVilt~g 275 (436)
T 3h9u_A 209 IAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------L----VEDVVE--EAHIFVTTTG 275 (436)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------C----HHHHTT--TCSEEEECSS
T ss_pred ccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------C----HHHHHh--hCCEEEECCC
Confidence 46999999996 999999999999999999999998877666666665321 2 222332 3899999887
Q ss_pred hhh-H-HHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 218 ASY-F-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 218 ~~~-~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
... + ...++.|+++..++.++.. ...++...+..+..+..++.
T Consensus 276 t~~iI~~e~l~~MK~gAIVINvgRg---~vEID~~~L~~~~~~~~~ir 320 (436)
T 3h9u_A 276 NDDIITSEHFPRMRDDAIVCNIGHF---DTEIQVAWLKANAKERVEVK 320 (436)
T ss_dssp CSCSBCTTTGGGCCTTEEEEECSSS---GGGBCHHHHHHHCSEEEEEE
T ss_pred CcCccCHHHHhhcCCCcEEEEeCCC---CCccCHHHHHhhcCceEeec
Confidence 633 2 3677889998888877642 34677777776666555544
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=2.9e-05 Score=61.45 Aligned_cols=75 Identities=15% Similarity=0.228 Sum_probs=51.8
Q ss_pred CCCEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHH
Q 024011 139 PGESFLVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga----------------~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 201 (274)
.|+++||+|+ +|++|.++++.+...|++|+++.++.. ++. ..+. ...+... .+..+.+.
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~--~~g~-~~~dv~~~~~~~~~v~ 82 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT--PPFV-KRVDVMTALEMEAAVN 82 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC--CTTE-EEEECCSHHHHHHHHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc--CCCC-eEEccCcHHHHHHHHH
Confidence 5899999999 589999999999999999999876542 110 1122 2334333 33444444
Q ss_pred HHhCCCCccEEEECCChh
Q 024011 202 EETGGKGVDVILDCMGAS 219 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~ 219 (274)
+..+ ++|++|+|+|..
T Consensus 83 ~~~~--~~Dili~~Aav~ 98 (226)
T 1u7z_A 83 ASVQ--QQNIFIGCAAVA 98 (226)
T ss_dssp HHGG--GCSEEEECCBCC
T ss_pred HhcC--CCCEEEECCccc
Confidence 4444 389999999853
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00021 Score=52.10 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=56.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.++++|+|+ |.+|..+++.+...|++|+++++++++.+.+++.+...+ ..+..+ .+.+.+ .+-.++|+||.+.+..
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~-~gd~~~-~~~l~~-~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAV-IADPTD-ESFYRS-LDLEGVSAVLITGSDD 81 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEE-ECCTTC-HHHHHH-SCCTTCSEEEECCSCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEE-ECCCCC-HHHHHh-CCcccCCEEEEecCCH
Confidence 467999997 899999999999999999999999999988887775433 222222 122222 2334689999999864
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00033 Score=53.54 Aligned_cols=95 Identities=20% Similarity=0.119 Sum_probs=66.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+++++|.|+ |.+|..+++.++.. |++|+++++++++.+.+++.|...+. |..+. +.+.+.++-.++|+||.+.+
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~---~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDP---DFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCH---HHHHTBCSCCCCCEEEECCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCH---HHHHhccCCCCCCEEEEeCC
Confidence 567999996 99999999999999 99999999999999888888876543 33322 22333213346899999998
Q ss_pred hhhH-HH---hhhccccCCEEEEEe
Q 024011 218 ASYF-QR---NLGSLNIDGRLFIIG 238 (274)
Q Consensus 218 ~~~~-~~---~~~~l~~~g~~v~~g 238 (274)
.... .. ..+.+.+..+++...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 6432 22 233344455666553
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=6.8e-05 Score=63.17 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=51.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH--HHHHHcCC--C-EEE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGA--D-VCI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g~--~-~~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
++++||+|++|.+|..+++.+.+.|++|++++|+.+.. +.+++++. . ..+ |..+.+....+.+.. ++|+|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~v 79 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDEV 79 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc---CCCEE
Confidence 67899999999999999999999999999999886643 23344321 1 122 333322222222221 47999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 80 ih~A~~ 85 (345)
T 2z1m_A 80 YNLAAQ 85 (345)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0001 Score=60.82 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=70.0
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCE--EEeCCCCcHHHHHHHHhCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEETGG 206 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~~~ 206 (274)
..++++++++||..|+ |..+..+..+++..|++|+.++.+++.++.+++ .|.+. ....+..++ ..
T Consensus 116 ~la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l--------~d 186 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI--------DG 186 (298)
T ss_dssp HHTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG--------GG
T ss_pred HHcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC--------CC
Confidence 3568899999999997 544566666677789999999999998877764 34322 222222221 13
Q ss_pred CCccEEEECCChh----hHHHhhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~ 240 (274)
..||+|+.++... .+..+.+.|+++|+++.....
T Consensus 187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 187 LEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 4699999766542 467788999999999987644
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00032 Score=59.62 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=63.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH--HHHHHcCCCEEEeCC-CCcHHHHHHHHhCCCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGADVCINYK-TEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++++|+|++|.+|..+++.+...|++|++++|+.++. +.+.+......+..+ -.+ .+.+.+... ++|.||.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d-~~~l~~~~~--~~d~Vi~~a 81 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN-VPLMDTLFE--GAHLAFINT 81 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTC-HHHHHHHHT--TCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCC-HHHHHHHHh--cCCEEEEcC
Confidence 57899999999999999999999999999999987764 333332222233333 222 233444443 489999887
Q ss_pred Chh------hHHHhhhcccc-C--CEEEEEecCC
Q 024011 217 GAS------YFQRNLGSLNI-D--GRLFIIGTQG 241 (274)
Q Consensus 217 g~~------~~~~~~~~l~~-~--g~~v~~g~~~ 241 (274)
+.. ....+++.++. + ++++.++...
T Consensus 82 ~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 82 TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp CSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 642 12233444433 2 5899887654
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00016 Score=64.25 Aligned_cols=82 Identities=18% Similarity=0.300 Sum_probs=56.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhh---H----HHHHHcCCCEE---EeCCCCcHHHHHHHHhC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---L----AVCKDLGADVC---INYKTEDFVARVKEETG 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~---~----~~~~~~g~~~~---~~~~~~~~~~~~~~~~~ 205 (274)
+++++++||+|++|++|..+++.+.+.|+ +|++++|+... . +.+++.|.... .|..+.+....+.+...
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999 59999988641 2 33445565432 23334333333333221
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|.||+++|.
T Consensus 303 ~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 303 DDVPLSAVFHAAAT 316 (486)
T ss_dssp TTSCEEEEEECCCC
T ss_pred hcCCCcEEEECCcc
Confidence 1358999999984
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00021 Score=59.14 Aligned_cols=92 Identities=14% Similarity=0.225 Sum_probs=60.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-------hhHHHHH---HcCCCEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-------EKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-------~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
+++++|+||+|.+|..+++.+.+.|++|++++|+. ++.+.++ ..+... +..+-.+ .+.+.+... ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d-~~~l~~~~~--~~ 77 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVIL-LEGDIND-HETLVKAIK--QV 77 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEE-EECCTTC-HHHHHHHHT--TC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEE-EEeCCCC-HHHHHHHHh--CC
Confidence 46799999999999999999999999999999986 5444332 334433 3223222 234444443 49
Q ss_pred cEEEECCChh---hHHHhhhccccC---CEEE
Q 024011 210 DVILDCMGAS---YFQRNLGSLNID---GRLF 235 (274)
Q Consensus 210 d~vi~~~g~~---~~~~~~~~l~~~---g~~v 235 (274)
|+||++++.. ....+++.++.. .+++
T Consensus 78 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp SEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred CEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 9999999853 233444444332 4665
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.70 E-value=5.8e-06 Score=66.29 Aligned_cols=72 Identities=29% Similarity=0.357 Sum_probs=49.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcHHHHHHHHhC-CCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETG-GKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~-~~~~d~vi~~~ 216 (274)
++++||+|++|++|.++++.+.+.|++|++++|+++ .+ ++ ..+ |..+.+..+.+.+... ..++|++|+++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~---~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a 74 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE---DL---IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA 74 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS---SS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc---ce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence 578999999999999999999999999999998865 11 11 222 4333332222222110 12489999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 75 g~ 76 (242)
T 1uay_A 75 GV 76 (242)
T ss_dssp CC
T ss_pred cc
Confidence 83
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.69 E-value=4.8e-05 Score=59.32 Aligned_cols=73 Identities=19% Similarity=0.309 Sum_probs=50.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEE--eCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|+|++|++|..+++.+.+. +|++++|++++.+.+. ++.. ..+ |..+.+..+.+.+.. .++|++|+++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag 75 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEA--GPLDLLVHAVG 75 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHH--CSEEEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 47999999999999999988877 9999999988776554 3333 333 333322223333222 25999999998
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 76 ~ 76 (207)
T 2yut_A 76 K 76 (207)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.68 E-value=7.4e-05 Score=62.79 Aligned_cols=80 Identities=18% Similarity=0.100 Sum_probs=49.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH--HHHHHcC--CC-EEE--eCCCCcHHHHHHHHhCCCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLG--AD-VCI--NYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g--~~-~~~--~~~~~~~~~~~~~~~~~~~ 208 (274)
..+++++|||+|++|.+|..+++.+.+.|++|++++|+.+.. +.+..+. .. ..+ |..+.+. +.+...+.+
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~ 86 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACS---VQRAVIKAQ 86 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHH---HHHHHHHHC
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHH---HHHHHHHcC
Confidence 456789999999999999999999999999999999876531 2222221 11 222 3333222 222222114
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||++++.
T Consensus 87 ~d~Vih~A~~ 96 (335)
T 1rpn_A 87 PQEVYNLAAQ 96 (335)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEECccc
Confidence 7999999984
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00028 Score=58.61 Aligned_cols=75 Identities=23% Similarity=0.341 Sum_probs=52.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-----hhhHHHHH---HcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-----EEKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-----~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
.++|+|+||+|.+|..+++.+.+.|++|++++|+ +++.+.++ ..+. .++..+-.+ .+.+.+... ++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d-~~~l~~~~~--~~d~ 79 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDD-HQRLVDALK--QVDV 79 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSC-HHHHHHHHT--TCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCe-EEEeCCCCC-HHHHHHHHh--CCCE
Confidence 4679999999999999999999999999999998 34443333 2233 233233222 234445444 4999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
||++++.
T Consensus 80 vi~~a~~ 86 (313)
T 1qyd_A 80 VISALAG 86 (313)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999885
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00023 Score=60.21 Aligned_cols=95 Identities=15% Similarity=0.221 Sum_probs=60.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh----hhHHHH---HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVC---KDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~----~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.++|||+||+|.+|..+++.+.+.|.+|++++|+. ++.+.+ ...+... +..+-.+ .+.+.+.....++|+|
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~-~~~Dl~d-~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAII-VYGLINE-QEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEE-EECCTTC-HHHHHHHHHHTTCCEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEE-EEeecCC-HHHHHHHHhhCCCCEE
Confidence 46799999999999999999999999999999976 444433 3344433 3222222 2333333332359999
Q ss_pred EECCChhh---HHHhhhccccCC---EEEE
Q 024011 213 LDCMGASY---FQRNLGSLNIDG---RLFI 236 (274)
Q Consensus 213 i~~~g~~~---~~~~~~~l~~~g---~~v~ 236 (274)
|++++... ...+++.++..| +++.
T Consensus 88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 88 VSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp EECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 99998632 334445554433 5553
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00026 Score=58.90 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=60.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
++|||+|++|.+|..+++.+.+.|.+|++++|++...+ ++ +. ..+..+-. .+.+.+... ++|+||++++...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~-~~~~~Dl~--~~~~~~~~~--~~d~Vih~a~~~~ 74 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DY-EYRVSDYT--LEDLINQLN--DVDAVVHLAATRG 74 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CC-EEEECCCC--HHHHHHHTT--TCSEEEECCCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ce-EEEEcccc--HHHHHHhhc--CCCEEEEccccCC
Confidence 68999999999999999999999999999999855444 33 22 22322322 455555554 5999999988421
Q ss_pred --------------HHHhhhccccC--CEEEEEecC
Q 024011 221 --------------FQRNLGSLNID--GRLFIIGTQ 240 (274)
Q Consensus 221 --------------~~~~~~~l~~~--g~~v~~g~~ 240 (274)
...+++.+... .+++.++..
T Consensus 75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~ 110 (311)
T 3m2p_A 75 SQGKISEFHDNEILTQNLYDACYENNISNIVYASTI 110 (311)
T ss_dssp SSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 12334444333 478888764
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00058 Score=49.81 Aligned_cols=95 Identities=12% Similarity=0.117 Sum_probs=67.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.++++|.|. |.+|..+++.++..|.+|+++++++++.+.+++.+...+. |..+.+. +. ..+-..+|.++.+.+.
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~---l~-~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEI---MQ-LAHLECAKWLILTIPN 81 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHH---HH-HTTGGGCSEEEECCSC
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHH---HH-hcCcccCCEEEEECCC
Confidence 467999997 9999999999999999999999999999998887775443 3333222 22 2223458999999986
Q ss_pred hhHH----HhhhccccCCEEEEEec
Q 024011 219 SYFQ----RNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~~~----~~~~~l~~~g~~v~~g~ 239 (274)
...+ ...+.+.+..+++....
T Consensus 82 ~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 82 GYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 5322 23444556667665543
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=9.4e-05 Score=61.89 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=32.7
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.|+++||+|+ +++||.++++.+.+.|++|++++|++
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~ 45 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP 45 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence 5799999998 89999999999999999999998653
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.64 E-value=8.1e-05 Score=63.58 Aligned_cols=77 Identities=16% Similarity=0.014 Sum_probs=52.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|||+|++|.+|..+++.+.+. |++|++++|+.++.+.+.+...-..+..+-.+..+.+.+... ++|+||++++.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~A~~ 101 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK--KCDVILPLVAI 101 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--HCSEEEECBCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--cCCEEEEcCcc
Confidence 578999999999999999999888 999999999887655443322222232222201222333332 48999999884
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00044 Score=59.90 Aligned_cols=93 Identities=17% Similarity=0.113 Sum_probs=69.8
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..-.|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|... . ++ ++ ... ..|+|+.+
T Consensus 243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v-----~L-eE---lL~--~ADIVv~a 309 (464)
T 3n58_A 243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-V-----TL-DD---AAS--TADIVVTT 309 (464)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-C-----CH-HH---HGG--GCSEEEEC
T ss_pred CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-c-----cH-HH---HHh--hCCEEEEC
Confidence 3457999999996 99999999999999999999998877655555556532 1 12 22 222 37999999
Q ss_pred CChhh--HHHhhhccccCCEEEEEecCC
Q 024011 216 MGASY--FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 216 ~g~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.|... ....++.|++++.++.+|...
T Consensus 310 tgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 88643 357788999999888887644
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00012 Score=62.40 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=33.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHH--cCCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKC--QGVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~--~g~~v~~~~~~~~ 175 (274)
.+++|||+||+|.+|..+++.+.+ .|++|++++|+..
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 478999999999999999999998 8999999998654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.61 E-value=4.3e-05 Score=60.61 Aligned_cols=76 Identities=13% Similarity=0.188 Sum_probs=51.7
Q ss_pred CCCEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHH
Q 024011 139 PGESFLVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga----------------~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 201 (274)
.|+++||+|+ +|.+|.++++.+...|++|+++.++.+... ....+. .+.+... .+..+.+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~~~~-~~~~v~s~~em~~~v~ 79 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-EPHPNL-SIREITNTKDLLIEMQ 79 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCCTTE-EEEECCSHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCCCCe-EEEEHhHHHHHHHHHH
Confidence 5899999999 788999999999999999999998753210 000122 2233332 33445555
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|++++.
T Consensus 80 ~~~~--~~Dili~aAAv 94 (232)
T 2gk4_A 80 ERVQ--DYQVLIHSMAV 94 (232)
T ss_dssp HHGG--GCSEEEECSBC
T ss_pred HhcC--CCCEEEEcCcc
Confidence 5554 48999999985
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=61.01 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=49.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
..+++|||+||+|.+|..+++.+.+.|++|++++|+.+. .+...+ .|..+. +.+.+... ++|+||+++
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~---~~~~~~~~--~~d~vih~A 85 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDG---QALSDAIM--GVSAVLHLG 85 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCH---HHHHHHHT--TCSEEEECC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCH---HHHHHHHh--CCCEEEECC
Confidence 457889999999999999999999999999999998765 233322 233332 23334443 599999998
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
+.
T Consensus 86 ~~ 87 (347)
T 4id9_A 86 AF 87 (347)
T ss_dssp CC
T ss_pred cc
Confidence 74
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00011 Score=61.83 Aligned_cols=78 Identities=15% Similarity=0.171 Sum_probs=50.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHH-HHHHcCCCEEE--eCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
..++++||+|++|.+|..+++.+.+.|++|++++|+..... .+.++.....+ |..+.+....+.+.. ++|+||+
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih 94 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH 94 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence 34789999999999999999999999999999998654321 11122111222 333322222222221 4899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9984
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=7.1e-05 Score=63.58 Aligned_cols=75 Identities=9% Similarity=0.055 Sum_probs=50.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc--C-CCEEE--eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--G-ADVCI--NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g-~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++++||+|++|.+|..+++.+.+.|++|++++|+.++.+.+. .+ + .-..+ |..+.+....+.+.. ++|+||
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi 85 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF 85 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence 678999999999999999999999999999999866432222 11 1 12223 333322222222221 489999
Q ss_pred ECCC
Q 024011 214 DCMG 217 (274)
Q Consensus 214 ~~~g 217 (274)
++++
T Consensus 86 h~A~ 89 (357)
T 1rkx_A 86 HMAA 89 (357)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9998
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=61.56 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=50.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.++||+|++|.+|..+++.+...|++|++++|+.++.+.+...+.. .+..+-.+ .+.+.+... ++|+||++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~d-~~~~~~~~~--~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE-CRVAEMLD-HAGLERALR--GLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCE-EEECCTTC-HHHHHHHTT--TCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeE-EEEecCCC-HHHHHHHHc--CCCEEEECCcc
Confidence 4899999999999999999999999999999987765433332332 22223222 233444443 49999999984
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0001 Score=62.14 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=49.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEE--eCCC-CcHHHHHHHHhCCCCccEEEECC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCI--NYKT-EDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++||+|++|.+|..+++.+.+. |++|++++|+.++.+.+.+...-..+ |..+ .+..+.+.+ ++|+||+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence 36999999999999999999988 89999999987765432221111222 3333 222222222 489999998
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
+.
T Consensus 76 ~~ 77 (345)
T 2bll_A 76 AI 77 (345)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00024 Score=60.01 Aligned_cols=76 Identities=18% Similarity=0.195 Sum_probs=49.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh----------hhHHHHHH-cCC-CEEE--eCCCCcHHHHHHHHhC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----------EKLAVCKD-LGA-DVCI--NYKTEDFVARVKEETG 205 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~----------~~~~~~~~-~g~-~~~~--~~~~~~~~~~~~~~~~ 205 (274)
++++||+|++|.+|..+++.+.+.|++|++++|+. +.++.+.+ .+. -..+ |..+.+....+.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-- 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence 47899999999999999999999999999998743 22333332 122 1223 33332222222222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|+||++++.
T Consensus 80 -~~~d~vih~A~~ 91 (348)
T 1ek6_A 80 -YSFMAVIHFAGL 91 (348)
T ss_dssp -CCEEEEEECCSC
T ss_pred -cCCCEEEECCCC
Confidence 259999999984
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00019 Score=61.17 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=30.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
++++||+|++|.+|..+++.+...|++|++++|+.+.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 37 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS 37 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 3689999999999999999999999999999987653
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00043 Score=65.21 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=56.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHH-HcCC-eEEEEecChh---h----HHHHHHcCCCEE---EeCCCCcHHHHHHHHh
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGK-CQGV-RVFVTAGSEE---K----LAVCKDLGADVC---INYKTEDFVARVKEET 204 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~-~~g~-~v~~~~~~~~---~----~~~~~~~g~~~~---~~~~~~~~~~~~~~~~ 204 (274)
+++++++||+|+++++|.++++.+. +.|+ ++++++|+.. + .+++++.|.... .|..+.+..+.+.+..
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~ 606 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI 606 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 4678999999999999999999997 7999 5899998832 2 234445665443 2444444444444332
Q ss_pred -CCCCccEEEECCCh
Q 024011 205 -GGKGVDVILDCMGA 218 (274)
Q Consensus 205 -~~~~~d~vi~~~g~ 218 (274)
...++|++|||+|.
T Consensus 607 ~~~~~id~lVnnAGv 621 (795)
T 3slk_A 607 PDEHPLTAVVHAAGV 621 (795)
T ss_dssp CTTSCEEEEEECCCC
T ss_pred HHhCCCEEEEECCCc
Confidence 22368999999985
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00029 Score=51.29 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=54.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+++++|+|+ |.+|..+++.+...|++|+++++++++.+.+++.+.. .+..+..+ .+.+.+. .-.++|+|+.+++..
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~-~~~l~~~-~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH-AVIANATE-ENELLSL-GIRNFEYVIVAIGAN 81 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE-EEECCTTC-HHHHHTT-TGGGCSEEEECCCSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCC-HHHHHhc-CCCCCCEEEECCCCc
Confidence 567999997 9999999999999999999999998887766655543 33223222 2233322 123589999999864
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00031 Score=59.07 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=48.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHH---HHHHcCC----CEEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA---VCKDLGA----DVCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~---~~~~~g~----~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.++++||+|++|.+|..+++.+.+.|++|++++|+.+..+ .+.++.. -..+ |..+.+... +... ++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~--~~ 78 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFD---EAIK--GC 78 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTH---HHHT--TC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHH---HHHc--CC
Confidence 4689999999999999999999999999999998876332 2222221 1122 333332222 2222 48
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|+||++++
T Consensus 79 d~Vih~A~ 86 (337)
T 2c29_D 79 TGVFHVAT 86 (337)
T ss_dssp SEEEECCC
T ss_pred CEEEEecc
Confidence 99999886
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=8.1e-05 Score=61.67 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
.++++||+|++ ++||.++++.+.+.|++|++++|+
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~ 43 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV 43 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence 47899999998 999999999999999999999865
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00058 Score=56.97 Aligned_cols=92 Identities=15% Similarity=0.287 Sum_probs=60.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh------hhHHHH---HHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVC---KDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~------~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.++++|+|++|.+|..+++.+.+.|++|++++|+. ++.+.+ ...+.. ++..+-.+ .+.+.+... ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~d-~~~l~~a~~--~~d 79 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEMEE-HEKMVSVLK--QVD 79 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTTC-HHHHHHHHT--TCS
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCCC-HHHHHHHHc--CCC
Confidence 46799999999999999999999999999999985 233333 233433 33233222 234555554 499
Q ss_pred EEEECCChhh---HHHhhhccccC---CEEE
Q 024011 211 VILDCMGASY---FQRNLGSLNID---GRLF 235 (274)
Q Consensus 211 ~vi~~~g~~~---~~~~~~~l~~~---g~~v 235 (274)
+||++++... ...+++.+... .+++
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 80 IVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 9999998532 33444544433 3666
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00014 Score=60.68 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-++.+++||+||+|.+|..+++.+.+.|++|++++|+.+. +. ++...+ .|..+.+....+.+ +.++|+||++
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~---~~~~d~vih~ 81 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVIS---DIKPDYIFHL 81 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHH---HHCCSEEEEC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHH---hcCCCEEEEc
Confidence 3567899999999999999999999999999999988664 21 222111 23333222222222 2348999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
++.
T Consensus 82 A~~ 84 (321)
T 2pk3_A 82 AAK 84 (321)
T ss_dssp CSC
T ss_pred Ccc
Confidence 984
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0006 Score=57.70 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=51.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh----hHHHHHH-c-----CCCEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCKD-L-----GADVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~-~-----g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
++++||+|++|.+|..+++.+.+.|++|++++|+.. .++.+.+ + ..-..+..+-.+ .+.+.+... ++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~ 103 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN-LDDCNNACA--GV 103 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS-HHHHHHHHT--TC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC-HHHHHHHhc--CC
Confidence 578999999999999999999999999999998653 3333321 1 111223233222 233444443 59
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||++++.
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 999999984
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00011 Score=61.76 Aligned_cols=77 Identities=12% Similarity=0.089 Sum_probs=49.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCCEEE--eCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.++++||+|++|.+|..+++.+.+.|++|++++|+.... +.+.++.....+ |..+.+....+.+ +..+|+||++
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~---~~~~D~vih~ 96 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIG---DLQPDAVVHT 96 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHH---HHCCSEEEEC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHh---ccCCcEEEEC
Confidence 468999999999999999999999999999999875431 111111111222 3333222222222 1248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 97 A~~ 99 (333)
T 2q1w_A 97 AAS 99 (333)
T ss_dssp CCC
T ss_pred cee
Confidence 984
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0004 Score=57.33 Aligned_cols=75 Identities=17% Similarity=0.163 Sum_probs=53.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhH--HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKL--AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.++++|+|++|.+|..+++.+.+.| ++|++++|+.++. +.+...+... +..+-.+ .+.+.+... ++|.||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~-~~~D~~d-~~~l~~~~~--~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEV-VQGDQDD-QVIMELALN--GAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEE-EECCTTC-HHHHHHHHT--TCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEE-EEecCCC-HHHHHHHHh--cCCEEEEeC
Confidence 4789999999999999999998888 9999999987654 3333445433 2222222 233444443 499999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
+.
T Consensus 81 ~~ 82 (299)
T 2wm3_A 81 NY 82 (299)
T ss_dssp CH
T ss_pred CC
Confidence 84
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00082 Score=57.78 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=32.3
Q ss_pred CCEEEEecCCchHHHHHHHHHH-HcCCeEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~~ 175 (274)
+.+|||+|++|.+|..+++.+. +.|++|++++|+..
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 38 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG 38 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence 4589999999999999999998 99999999998654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00018 Score=61.76 Aligned_cols=76 Identities=12% Similarity=0.050 Sum_probs=51.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.++++||+|++|.+|..+++.+.+.|++|++++|+.++.......+. ..+..+-.+ .+.+.+... ++|+||++++.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v-~~~~~Dl~d-~~~~~~~~~--~~d~Vih~A~~ 103 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD-EFHLVDLRV-MENCLKVTE--GVDHVFNLAAD 103 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCS-EEEECCTTS-HHHHHHHHT--TCSEEEECCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCc-eEEECCCCC-HHHHHHHhC--CCCEEEECcee
Confidence 35789999999999999999999999999999988654322211122 223223222 223444443 59999999883
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00024 Score=59.13 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=40.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++||+|++|.+|..+++.+.+.|++|++++|+.+.. + ....|..+.+....+.+.. ++|+||+++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~-~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP------K-FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------CHHHHHHH---CCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC------C-eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence 57899999999999999999999999999999765431 1 1112332222222222211 48999999984
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00089 Score=54.69 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=61.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--CEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++++++|+|+ |++|.++++.+...|++|+++.|+.++.+.+. +++. .... .+.++ + .. .++|+||++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~-~~~~~----~---~~-~~~DivVn~ 187 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA-LSMDE----L---EG-HEFDLIINA 187 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE-CCSGG----G---TT-CCCSEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeE-ecHHH----h---cc-CCCCEEEEC
Confidence 5899999998 89999999999999999999999988875554 4432 1111 11111 1 11 359999999
Q ss_pred CChhhHHH----hhhccccCCEEEEEecC
Q 024011 216 MGASYFQR----NLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~~~----~~~~l~~~g~~v~~g~~ 240 (274)
++...... ..+.++++..++++...
T Consensus 188 t~~~~~~~~~~i~~~~l~~~~~v~D~~y~ 216 (271)
T 1nyt_A 188 TSSGISGDIPAIPSSLIHPGIYCYDMFYQ 216 (271)
T ss_dssp CSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 98643211 12335566667776553
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.002 Score=52.90 Aligned_cols=95 Identities=11% Similarity=0.110 Sum_probs=61.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-HcC----CCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLG----ADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
-.+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+. +++ ...+...+.+++.+.+. .+|+
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~------~~Di 197 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIA------AADG 197 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHH------HSSE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHh------cCCE
Confidence 45899999998 8999999999999999 7999999988876553 221 11111112223333332 2899
Q ss_pred EEECCChhh-----HHHhhhccccCCEEEEEec
Q 024011 212 ILDCMGASY-----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 212 vi~~~g~~~-----~~~~~~~l~~~g~~v~~g~ 239 (274)
|||++.... ..-..+.++++..++++-.
T Consensus 198 VInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY 230 (283)
T 3jyo_A 198 VVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVY 230 (283)
T ss_dssp EEECSSTTSTTSCSCSSCGGGCCTTCEEEECCC
T ss_pred EEECCCCCCCCCCCCCCCHHHhCCCCEEEEecC
Confidence 999986321 1112345666666666654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00041 Score=73.24 Aligned_cols=81 Identities=19% Similarity=0.170 Sum_probs=57.2
Q ss_pred CCCCEEEEecCCch-HHHHHHHHHHHcCCeEEEEecChhh-----HHHH-HHc---CCCEE---EeCCCCcHHHHHHHHh
Q 024011 138 SPGESFLVHGGSSG-IGTFAIQMGKCQGVRVFVTAGSEEK-----LAVC-KDL---GADVC---INYKTEDFVARVKEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~-iG~~~~~~~~~~g~~v~~~~~~~~~-----~~~~-~~~---g~~~~---~~~~~~~~~~~~~~~~ 204 (274)
-.|+++||+|+++| ||.++++.+.+.|++|++++|+.++ ++.+ +++ |.... .|..+.+..+.+.+..
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 56999999999999 9999999999999999999988665 3333 233 32222 3444444444444332
Q ss_pred CC------CCccEEEECCCh
Q 024011 205 GG------KGVDVILDCMGA 218 (274)
Q Consensus 205 ~~------~~~d~vi~~~g~ 218 (274)
.. .++|++|||+|.
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCC
T ss_pred HhhhhhhcCCCCEEEECCCc
Confidence 22 358999999995
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0013 Score=54.53 Aligned_cols=92 Identities=15% Similarity=0.074 Sum_probs=63.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-HcCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+. +++.. .+.+ + +.+.+.. ..+|+||+
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-----~-~~~~~~~--~~aDivIn 210 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-----L-AEAETRL--AEYDIIIN 210 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-----H-HHHHHTG--GGCSEEEE
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-----H-HHHHhhh--ccCCEEEE
Confidence 5789999997 8999999999999998 9999999988876554 45441 1211 1 2333333 24899999
Q ss_pred CCChhhHH------HhhhccccCCEEEEEec
Q 024011 215 CMGASYFQ------RNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 215 ~~g~~~~~------~~~~~l~~~g~~v~~g~ 239 (274)
+++..... -....++++..++++..
T Consensus 211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 99854321 11245667777777765
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00053 Score=57.69 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=48.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh--h---hHHHHHHcCCCEEE--eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--E---KLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~--~---~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
+++||+|++|.+|..+++.+.+.|++|++++|+. . ..+.+...+....+ |..+.+..+.+.+. ..+|+||
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi 78 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK---YMPDSCF 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc---cCCCEEE
Confidence 4799999999999999999999999999998742 1 12233332322233 33333222222221 2489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 79 h~A~~ 83 (347)
T 1orr_A 79 HLAGQ 83 (347)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99984
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00051 Score=56.85 Aligned_cols=92 Identities=21% Similarity=0.284 Sum_probs=58.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh------hhHHHHH---HcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~------~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.++|+|+|++|.+|..+++.+.+.|++|++++|+. ++.+.++ ..+.. ++..+-.+ .+.+.+... ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d-~~~l~~~~~--~~d 79 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDD-HASLVEAVK--NVD 79 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTC-HHHHHHHHH--TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCC-HHHHHHHHc--CCC
Confidence 46799999999999999999999999999999873 3333332 33433 33222222 233444333 489
Q ss_pred EEEECCChhh---HHHhhhcccc---CCEEE
Q 024011 211 VILDCMGASY---FQRNLGSLNI---DGRLF 235 (274)
Q Consensus 211 ~vi~~~g~~~---~~~~~~~l~~---~g~~v 235 (274)
+||++++... ....++.++. -.+++
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 80 VVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred EEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 9999998632 2334444433 24666
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00069 Score=55.47 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=63.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS- 219 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~- 219 (274)
++|||+|+ |.+|..+++.+.+.|++|++++|+.++.+.+...+...+ ..+-.++. -.++|+||++++..
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d~~--------~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPL-LWPGEEPS--------LDGVTHLLISTAPDS 75 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEE-ESSSSCCC--------CTTCCEEEECCCCBT
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEE-Eecccccc--------cCCCCEEEECCCccc
Confidence 68999998 999999999999999999999999988877766554333 22222211 24599999999742
Q ss_pred ----hHHHhhhcccc----CCEEEEEecC
Q 024011 220 ----YFQRNLGSLNI----DGRLFIIGTQ 240 (274)
Q Consensus 220 ----~~~~~~~~l~~----~g~~v~~g~~ 240 (274)
.....++.++. -.+++.++..
T Consensus 76 ~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 76 GGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp TBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred cccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 12334444433 2688888764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00057 Score=58.22 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=53.3
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHH-HcCCeEEEEecChhh----------------HHHHHHcCCCEE-Ee--CCCCcH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEK----------------LAVCKDLGADVC-IN--YKTEDF 196 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~~~----------------~~~~~~~g~~~~-~~--~~~~~~ 196 (274)
...+|++||+|+++|+|++++..+. ..|+.++++.+..+. .+.+++.|.... ++ ..+++.
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 3567999999999999998776555 789999888764321 134455665443 33 333333
Q ss_pred ----HHHHHHHhCCCCccEEEECCChh
Q 024011 197 ----VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 197 ----~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.+.+.+.+ +++|+++++++..
T Consensus 127 i~~vi~~i~~~~--G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 127 KAQVIEEAKKKG--IKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHHTT--CCEEEEEECCCCS
T ss_pred HHHHHHHHHHhc--CCCCEEEEecccc
Confidence 33344433 3599999999853
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0019 Score=53.88 Aligned_cols=96 Identities=9% Similarity=0.068 Sum_probs=61.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC---hhhHHHHH-H----cCCC-EEEeCCCCcHHHHHHHHhCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS---EEKLAVCK-D----LGAD-VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~---~~~~~~~~-~----~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (274)
-.|++++|+|+ |++|.+++..+...|+ +|+++.|+ .++.+.+. + .+.. ...+.++. +.+.+...
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~---~~l~~~l~-- 225 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH---EQLRKEIA-- 225 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH---HHHHHHHH--
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH---HHHHhhhc--
Confidence 35899999997 8999999999999999 89999999 66655443 2 2221 22333321 22222222
Q ss_pred CccEEEECCChhhH------HH-hhhccccCCEEEEEec
Q 024011 208 GVDVILDCMGASYF------QR-NLGSLNIDGRLFIIGT 239 (274)
Q Consensus 208 ~~d~vi~~~g~~~~------~~-~~~~l~~~g~~v~~g~ 239 (274)
.+|+|||++..... .. ..+.++++..++++-.
T Consensus 226 ~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY 264 (315)
T 3tnl_A 226 ESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY 264 (315)
T ss_dssp TCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCC
T ss_pred CCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEecc
Confidence 38999999863211 11 2345666666666654
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.001 Score=54.23 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=65.8
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|....+...+.+...--.|++++|.|+++-+|..++.++...|++|+++.+... +..+
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~-------------------~L~~- 199 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK-------------------DLSL- 199 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------CHHH-
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch-------------------hHHH-
Confidence 34444444444444433347999999999667899999999999999998875422 2222
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
... ..|+||.++|...+ ---++++++..++++|...
T Consensus 200 ---~~~--~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 200 ---YTR--QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR 235 (285)
T ss_dssp ---HHT--TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred ---Hhh--cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence 222 38999999997543 2236678888888888653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00079 Score=56.09 Aligned_cols=91 Identities=19% Similarity=0.324 Sum_probs=59.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHH---HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVC---KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++++|+|++|.+|..+++.+.+.|++|++++|+.+ +.+.+ ...+... +..+-.+ .+.+.+... ++|+||+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~-v~~Dl~d-~~~l~~a~~--~~d~vi~~a 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAII-VKGELDE-HEKLVELMK--KVDVVISAL 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEE-EECCTTC-HHHHHHHHT--TCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEE-EEecCCC-HHHHHHHHc--CCCEEEECC
Confidence 57999999999999999999999999999999874 33332 3344433 3223222 234445443 499999999
Q ss_pred Chhh---HHHhhhccccC---CEEE
Q 024011 217 GASY---FQRNLGSLNID---GRLF 235 (274)
Q Consensus 217 g~~~---~~~~~~~l~~~---g~~v 235 (274)
+... ...+++.++.. .+++
T Consensus 88 ~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 88 AFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp CGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred chhhhHHHHHHHHHHHhcCCCCEEE
Confidence 8532 33444444332 3665
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0012 Score=53.74 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=65.4
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|....+...+.+...--.|++++|.|+++-+|..+++++...|++|+++.+... +..+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~-------------------~L~~- 200 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT-------------------DLKS- 200 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------SHHH-
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------------hHHH-
Confidence 34444444444544433347999999998666899999999999999988764321 2222
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
... ..|+||.++|...+ ---++++++..++++|...
T Consensus 201 ---~~~--~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 201 ---HTT--KADILIVAVGKPNF-ITADMVKEGAVVIDVGINH 236 (285)
T ss_dssp ---HHT--TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred ---hcc--cCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence 222 38999999997543 2236678888888888653
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0027 Score=45.74 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=60.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+++|+|+ |.+|..+++.+.+.|.+|+++++++++.+.+.+ .+... +..+..+. +.+.+. .-.++|+||.+++.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~~~-~~l~~~-~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALV-INGDCTKI-KTLEDA-GIEDADMYIAVTGK 79 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEE-EESCTTSH-HHHHHT-TTTTCSEEEECCSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEE-EEcCCCCH-HHHHHc-CcccCCEEEEeeCC
Confidence 467999997 999999999999999999999999888877664 45433 32222221 222221 22358999999986
Q ss_pred hhHH----HhhhccccCCEEEEE
Q 024011 219 SYFQ----RNLGSLNIDGRLFII 237 (274)
Q Consensus 219 ~~~~----~~~~~l~~~g~~v~~ 237 (274)
...+ ...+.+.+ ++++..
T Consensus 80 ~~~~~~~~~~~~~~~~-~~ii~~ 101 (140)
T 1lss_A 80 EEVNLMSSLLAKSYGI-NKTIAR 101 (140)
T ss_dssp HHHHHHHHHHHHHTTC-CCEEEE
T ss_pred chHHHHHHHHHHHcCC-CEEEEE
Confidence 5322 22333444 466654
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00039 Score=57.92 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=46.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-Chhh---HHHHHHcCC---C-EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEK---LAVCKDLGA---D-VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~---~~~~~~~g~---~-~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
|+++||+||+|.+|..+++.+.+.|++|++++| +.+. .+.+.++.. . ..+ |..+.+. +.+... ++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~--~~ 75 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDS---FAAAIE--GC 75 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGG---GHHHHT--TC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHH---HHHHHc--CC
Confidence 578999999999999999999999999999888 5432 222222211 1 112 3333222 222332 48
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|+||++++
T Consensus 76 d~vih~A~ 83 (322)
T 2p4h_X 76 VGIFHTAS 83 (322)
T ss_dssp SEEEECCC
T ss_pred CEEEEcCC
Confidence 99999986
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0018 Score=52.80 Aligned_cols=96 Identities=17% Similarity=0.084 Sum_probs=66.5
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|....+...|.+...--.|++++|.|.++-+|..++.++...|++|+++.+... +..+.
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~-------------------~L~~~ 201 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR-------------------DLADH 201 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS-------------------CHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc-------------------CHHHH
Confidence 34444444444544433347999999998777999999999999999998864321 22222
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++ ..|+||.++|...+ ---++++++..++.+|...
T Consensus 202 ~~------~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 202 VS------RADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR 236 (286)
T ss_dssp HH------TCSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred hc------cCCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence 22 27999999997543 2236778998999998764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00032 Score=57.63 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=45.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..++.+++||+|++|.+|..+++.+.+.|++|++++|+. .|..+.+....+.+.. ++|+||++
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------------~Dl~d~~~~~~~~~~~---~~d~vih~ 70 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------LDITNVLAVNKFFNEK---KPNVVINC 70 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred cccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc--------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence 345678999999999999999999999999999999862 2223322222222211 48999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
++.
T Consensus 71 A~~ 73 (292)
T 1vl0_A 71 AAH 73 (292)
T ss_dssp CCC
T ss_pred Ccc
Confidence 984
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00073 Score=56.73 Aligned_cols=74 Identities=22% Similarity=0.356 Sum_probs=47.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecCh----hhHHHHHHc-CC-CEEE--eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVCKDL-GA-DVCI--NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~----~~~~~~~~~-g~-~~~~--~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++||+|++|.+|..+++.+.+.|++|+++++.. +..+.+.++ +. ...+ |..+.+..+.+.+. .++|+||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~D~vi 78 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD---HAIDTVI 78 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc---cCCCEEE
Confidence 689999999999999999999999999987532 223333332 21 2223 33333322222222 2589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+++|.
T Consensus 79 h~A~~ 83 (338)
T 1udb_A 79 HFAGL 83 (338)
T ss_dssp ECCSC
T ss_pred ECCcc
Confidence 99984
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00012 Score=62.17 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=47.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcC-CCEEEeCCCCcHHHHHHHHhCC---CCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGG---KGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~---~~~d~vi 213 (274)
+++++||+|++|.+|..+++.+.+.| ++|++++|+..... ...+. .....|..+. +.+.+.... .++|+||
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~d~Vi 120 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLNIADYMDKE---DFLIQIMAGEEFGDVEAIF 120 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSCCSEEEEHH---HHHHHHHTTCCCSSCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCceEeeecCcH---HHHHHHHhhcccCCCCEEE
Confidence 35789999999999999999999999 89999998765421 11111 1111122222 223333322 2599999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 121 h~A~~ 125 (357)
T 2x6t_A 121 HEGAC 125 (357)
T ss_dssp ECCSC
T ss_pred ECCcc
Confidence 99984
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0023 Score=51.89 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=66.2
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|........+.+.. -.|++++|.|+++-+|..+++++...|++|+++.++. .+..+.
T Consensus 132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------------~~L~~~ 190 (276)
T 3ngx_A 132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------------KDIGSM 190 (276)
T ss_dssp CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SCHHHH
T ss_pred CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------ccHHHh
Confidence 3444445555555544 5799999999966799999999999999999886532 233333
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+++ .|+||.++|.+.+ ---++++++..++.+|...
T Consensus 191 ~~~------ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 191 TRS------SKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY 225 (276)
T ss_dssp HHH------SSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred hcc------CCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence 332 7999999987542 1235678888888888653
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00068 Score=68.34 Aligned_cols=81 Identities=20% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCCCEEEEecCCch-HHHHHHHHHHHcCCeEEEE-ecChhhHHHH-----HHc---CCCEE---EeCCCCcHHHHHHHHh
Q 024011 138 SPGESFLVHGGSSG-IGTFAIQMGKCQGVRVFVT-AGSEEKLAVC-----KDL---GADVC---INYKTEDFVARVKEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~-iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~-----~~~---g~~~~---~~~~~~~~~~~~~~~~ 204 (274)
-.|+++||+|+++| ||.++++.+.+.|++|+++ .|+.++.+.+ +++ +.... .|..+.+..+.+.+..
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 35899999999998 9999999999999999998 4665554322 222 33222 2444443344443322
Q ss_pred -CC------C-CccEEEECCCh
Q 024011 205 -GG------K-GVDVILDCMGA 218 (274)
Q Consensus 205 -~~------~-~~d~vi~~~g~ 218 (274)
.. . .+|++|+|+|.
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi 774 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAI 774 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCC
T ss_pred HHhccccccCCCCeEEEECCCc
Confidence 21 1 49999999984
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0016 Score=53.44 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=65.7
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|....+...+.+...--.|++++|.|+++-+|..+++++...|++|+++.+....++
T Consensus 145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~--------------------- 203 (300)
T 4a26_A 145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED--------------------- 203 (300)
T ss_dssp CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH---------------------
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch---------------------
Confidence 34444444444544433457999999998666899999999999999998876433221
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+.+... ..|+||.++|...+ ---++++++..++++|..
T Consensus 204 l~~~~~--~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 204 MIDYLR--TADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT 241 (300)
T ss_dssp HHHHHH--TCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred hhhhhc--cCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence 001221 27999999997543 123567888888888864
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0029 Score=54.74 Aligned_cols=93 Identities=9% Similarity=0.044 Sum_probs=59.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC---CeEEEEecChhhHHHHH-HcC-----CCEE--EeCCCCcHHHHHHHHhCCCCc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCK-DLG-----ADVC--INYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g---~~v~~~~~~~~~~~~~~-~~g-----~~~~--~~~~~~~~~~~~~~~~~~~~~ 209 (274)
++++|+|+ |++|..+++.+.+.| .+|++.+|+.++.+.+. +++ .... .|..+.+..+.+.+.. ++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~ 77 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KP 77 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CC
Confidence 47899998 899999999999888 48999999998876554 222 1122 2333323233333322 48
Q ss_pred cEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 210 DVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 210 d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
|+||++++... ......+++.+-.++.+
T Consensus 78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 78 QIVLNIALPYQDLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred CEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence 99999998643 22233445555555554
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0004 Score=57.57 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=49.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++++||+|++|.+|..+++.+... |++|++++|+....+... +...+ .|..+.+ .+.+.....++|+||+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~---~~~~~~~~~~~d~vih~a 76 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFN---QIEHLVEVHKITDIYLMA 76 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHH---HHHHHHHHTTCCEEEECC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHH---HHHHHHhhcCCCEEEECC
Confidence 367999999999999999999888 899999998766533222 22222 2333322 233322212589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
+.
T Consensus 77 ~~ 78 (312)
T 2yy7_A 77 AL 78 (312)
T ss_dssp CC
T ss_pred cc
Confidence 84
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00045 Score=59.15 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHH-HHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~-~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++|||+|++|.+|..+++.+.+.| ++|++++|+.+... .+.. ... ..+..+-.+ .+.+.+... ++|+||++
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~-~~~v~~~~~Dl~d-~~~l~~~~~--~~d~Vih~ 106 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD-HPAVRFSETSITD-DALLASLQD--EYDYVFHL 106 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC-CTTEEEECSCTTC-HHHHHHCCS--CCSEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC-CCceEEEECCCCC-HHHHHHHhh--CCCEEEEC
Confidence 36789999999999999999999999 99999998765321 1110 111 222222222 233444443 59999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
++.
T Consensus 107 A~~ 109 (377)
T 2q1s_A 107 ATY 109 (377)
T ss_dssp CCC
T ss_pred CCc
Confidence 984
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00082 Score=59.57 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=35.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc---CCeEEEEecChhhH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGSEEKL 177 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~---g~~v~~~~~~~~~~ 177 (274)
...+++|||+|++|.+|..+++.+.+. |.+|++++|+++..
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~ 113 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE 113 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence 356899999999999999999998888 89999999986643
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00084 Score=67.61 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=53.3
Q ss_pred CCCEEEEecCCch-HHHHHHHHHHHcCCeEEEEe-cChhhHHH----H-HHc---CCCEE---EeCCCCcHHHHHHHHh-
Q 024011 139 PGESFLVHGGSSG-IGTFAIQMGKCQGVRVFVTA-GSEEKLAV----C-KDL---GADVC---INYKTEDFVARVKEET- 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~-iG~~~~~~~~~~g~~v~~~~-~~~~~~~~----~-~~~---g~~~~---~~~~~~~~~~~~~~~~- 204 (274)
.|+++||+|++++ ||.++++.+.+.|++|++++ |+.++++. + .++ |.... .|..+.+..+.+.+..
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~ 730 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY 730 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 5899999999998 99999999999999999985 54444322 2 233 33222 2444443344443322
Q ss_pred CC---C--CccEEEECCCh
Q 024011 205 GG---K--GVDVILDCMGA 218 (274)
Q Consensus 205 ~~---~--~~d~vi~~~g~ 218 (274)
.. . .+|++|+|+|.
T Consensus 731 ~~~~~~G~~IDiLVnNAGi 749 (1878)
T 2uv9_A 731 DTKNGLGWDLDYVVPFAAI 749 (1878)
T ss_dssp CSSSSCCCCCSEEEECCCC
T ss_pred HhhcccCCCCcEEEeCccc
Confidence 22 2 49999999983
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00076 Score=58.07 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=32.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
-+.+.+|||+|++|.+|..+++.+.+.|++|+++++...
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~ 46 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR 46 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 356789999999999999999999999999999987643
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0039 Score=53.14 Aligned_cols=92 Identities=12% Similarity=0.179 Sum_probs=63.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
.+|+|.|+ |.+|..+++.+.+ ..+|.+.+++.++++.+++......+|.++ .+.+.+... +.|+||++++...
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d---~~~l~~~~~--~~DvVi~~~p~~~ 89 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASN---FDKLVEVMK--EFELVIGALPGFL 89 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTC---HHHHHHHHT--TCSEEEECCCGGG
T ss_pred cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCC---HHHHHHHHh--CCCEEEEecCCcc
Confidence 47999998 9999999998865 578999999999888876654433344443 234555544 3899999998643
Q ss_pred -HHHhhhccccCCEEEEEec
Q 024011 221 -FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 221 -~~~~~~~l~~~g~~v~~g~ 239 (274)
...+-.+++.+-.++++..
T Consensus 90 ~~~v~~~~~~~g~~yvD~s~ 109 (365)
T 3abi_A 90 GFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHHHTCEEEECCC
T ss_pred cchHHHHHHhcCcceEeeec
Confidence 3333345556666666543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00037 Score=58.31 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=48.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC-CCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++||+|++|.+|..+++.+.+.|++|++++|+..... ..+. .-..+..+-.+ .+.+.+.....++|+||++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vih~a~~ 77 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNGDLRD-KAFLRDVFTQENIEAVMHFAAD 77 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEECCTTC-HHHHHHHHHHSCEEEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEECCCCC-HHHHHHHHhhcCCCEEEECCcc
Confidence 57999999999999999999999999999988654321 1121 12222222222 1222222221359999999984
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00021 Score=60.20 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=50.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC-------CeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG-------VRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g-------~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~ 208 (274)
.++++||+|++|.+|..+++.+.+.| ++|++++|+.++... ..+.. .. .|..+.+..+.+.+ .+
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~----~~ 86 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAADLSAPGEAEKLVE----AR 86 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEECCTTSTTHHHHHHH----TC
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEcCCCCHHHHHHHHh----cC
Confidence 46789999999999999999999999 899999987643211 11111 11 24344333333322 25
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||++++.
T Consensus 87 ~d~vih~A~~ 96 (342)
T 2hrz_A 87 PDVIFHLAAI 96 (342)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999984
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00039 Score=68.29 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=53.6
Q ss_pred CCCEEEEecCCch-HHHHHHHHHHHcCCeEEEE-ecChhhHHH-HHHc-------CCCEE---EeCCCCcHHHHHHHH-h
Q 024011 139 PGESFLVHGGSSG-IGTFAIQMGKCQGVRVFVT-AGSEEKLAV-CKDL-------GADVC---INYKTEDFVARVKEE-T 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~-iG~~~~~~~~~~g~~v~~~-~~~~~~~~~-~~~~-------g~~~~---~~~~~~~~~~~~~~~-~ 204 (274)
.|+++||+|++++ ||.++++.+.+.|++|+++ .|+.++++. .+++ +.... .|..+.+..+.+.+. .
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~ 554 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 554 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 5789999999998 9999999999999999998 465544322 2222 32221 254454444444432 2
Q ss_pred CC-----C--CccEEEECCCh
Q 024011 205 GG-----K--GVDVILDCMGA 218 (274)
Q Consensus 205 ~~-----~--~~d~vi~~~g~ 218 (274)
.. . .+|++|+|+|.
T Consensus 555 e~~~~~GfG~~IDILVNNAGI 575 (1688)
T 2pff_A 555 DTEKNGGLGWDLDAIIPFAAI 575 (1688)
T ss_dssp SCTTSSSCCCCCCEEECCCCC
T ss_pred HhccccccCCCCeEEEECCCc
Confidence 22 1 49999999983
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0023 Score=52.15 Aligned_cols=96 Identities=15% Similarity=0.072 Sum_probs=66.2
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|........+.+...--.|++++|.|++.-+|.-+++++...|++|+++.+.. .+..+.
T Consensus 139 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~L~~~ 199 (288)
T 1b0a_A 139 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------------KNLRHH 199 (288)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------------SCHHHH
T ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------hhHHHH
Confidence 4444444444444433334689999999966689999999999999999886443 233333
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+++ .|+||.++|...+ ---++++++..++++|...
T Consensus 200 ~~~------ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 200 VEN------ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR 234 (288)
T ss_dssp HHH------CSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred hcc------CCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence 332 7999999997643 2234578888999988653
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0023 Score=52.56 Aligned_cols=96 Identities=11% Similarity=0.032 Sum_probs=64.7
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
++|........+.+...--.|++++|.|++.-+|.-+++++...|++|+++.+.. .++.+.
T Consensus 145 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~L~~~ 205 (301)
T 1a4i_A 145 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------------AHLDEE 205 (301)
T ss_dssp CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SSHHHH
T ss_pred cCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc-------------------ccHHHH
Confidence 3333333333343332234689999999966789999999999999999886432 222222
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+. ..|+||.++|...+ ---++++++..++++|...
T Consensus 206 ----~~--~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 206 ----VN--KGDILVVATGQPEM-VKGEWIKPGAIVIDCGINY 240 (301)
T ss_dssp ----HT--TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred ----hc--cCCEEEECCCCccc-CCHHHcCCCcEEEEccCCC
Confidence 22 38999999997643 2235678999999998764
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0017 Score=52.85 Aligned_cols=87 Identities=22% Similarity=0.229 Sum_probs=62.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+++++|+|+ |++|.+++..+...|.+|+++.|+.++.+.+.+++.. ....++ . ..+|+|||++...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~--l----------~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPP--K----------SAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCC--S----------SCCSEEEECCTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHH--h----------ccCCEEEEcccCC
Confidence 899999997 9999999999999999999999999988766666633 222221 1 1489999987642
Q ss_pred -----hHH-H-hhhccccCCEEEEEecC
Q 024011 220 -----YFQ-R-NLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 220 -----~~~-~-~~~~l~~~g~~v~~g~~ 240 (274)
.++ . ....++++..++++...
T Consensus 184 m~~~~~l~~~~l~~~l~~~~~v~D~vY~ 211 (269)
T 3phh_A 184 LHNELPLNKEVLKGYFKEGKLAYDLAYG 211 (269)
T ss_dssp CCCSCSSCHHHHHHHHHHCSEEEESCCS
T ss_pred CCCCCCCChHHHHhhCCCCCEEEEeCCC
Confidence 121 1 12256777777777653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00033 Score=59.82 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=32.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+++||+|++|.+|..+++.+.+.|++|++++|+.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 59 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS 59 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence 68999999999999999999999999999998754
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00048 Score=58.99 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=32.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
++|||+|++|.+|..+++.+...|++|++++|+.+.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 689999999999999999999999999999987653
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0022 Score=56.55 Aligned_cols=94 Identities=12% Similarity=0.156 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHc-CCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+++++|+|+ |++|.+++..+.+. +++|++++|+.++.+.+.+. +.. ....+..+. +.+.+... ++|+||+++
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~-~~~~D~~d~-~~l~~~l~--~~DvVIn~t 96 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSK-AISLDVTDD-SALDKVLA--DNDVVISLI 96 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCE-EEECCTTCH-HHHHHHHH--TSSEEEECS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCc-EEEEecCCH-HHHHHHHc--CCCEEEECC
Confidence 3678999997 99999999999887 77999999999887766543 322 222222222 22333332 489999999
Q ss_pred ChhhHH-HhhhccccCCEEEEE
Q 024011 217 GASYFQ-RNLGSLNIDGRLFII 237 (274)
Q Consensus 217 g~~~~~-~~~~~l~~~g~~v~~ 237 (274)
+..... ....+++.+-.+++.
T Consensus 97 p~~~~~~v~~a~l~~g~~vvd~ 118 (467)
T 2axq_A 97 PYTFHPNVVKSAIRTKTDVVTS 118 (467)
T ss_dssp CGGGHHHHHHHHHHHTCEEEEC
T ss_pred chhhhHHHHHHHHhcCCEEEEe
Confidence 864321 122334444455544
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00071 Score=56.82 Aligned_cols=73 Identities=15% Similarity=0.194 Sum_probs=48.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH---HHHHHcC--CC-EEE--eCCCCcHHHHHHHHhCCCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCKDLG--AD-VCI--NYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~---~~~~~~g--~~-~~~--~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
++++||+|++|.+|..+++.+.+.|++|+++.|+.+.. ..+.++. .. ..+ |..+.+... +... ++|+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~--~~D~ 83 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFE---APIA--GCDF 83 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSH---HHHT--TCSE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHH---HHHc--CCCE
Confidence 68999999999999999999999999999988876532 2222221 11 122 333332222 2222 4899
Q ss_pred EEECCC
Q 024011 212 ILDCMG 217 (274)
Q Consensus 212 vi~~~g 217 (274)
||++++
T Consensus 84 Vih~A~ 89 (338)
T 2rh8_A 84 VFHVAT 89 (338)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999886
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0008 Score=56.40 Aligned_cols=76 Identities=24% Similarity=0.165 Sum_probs=48.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChh--hHHHHHHc--CCC-EEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE--KLAVCKDL--GAD-VCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~--~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+.++||+|++|.+|..+++.+.+.| ++|++++|+.. ..+.+.++ +.. ..+..+-.+ .+.+.+.. .++|+|
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~--~~~d~v 79 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVAD-YELVKELV--RKVDGV 79 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHH--HTCSEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCC-HHHHHHHh--hCCCEE
Confidence 4679999999999999999998886 89999987641 12222222 111 222222222 22333333 359999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 80 ih~A~~ 85 (336)
T 2hun_A 80 VHLAAE 85 (336)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0033 Score=53.16 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=39.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~ 186 (274)
-.|+++.|.|. |.+|+.+++.++..|++|++++.+.++.+..+++++.
T Consensus 173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~ 220 (355)
T 1c1d_A 173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT 220 (355)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE
Confidence 47999999996 9999999999999999999888877664455556643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0072 Score=50.23 Aligned_cols=96 Identities=10% Similarity=0.091 Sum_probs=59.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC---hhhHHHHH-H----cCCC-EEEeCCCCcHHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS---EEKLAVCK-D----LGAD-VCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~---~~~~~~~~-~----~g~~-~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
.+++++|+|+ |++|.+++..+...|+ +|+++.|+ .++.+.+. + .+.. ...+..+.++ +.+... .
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~---~~~~l~--~ 220 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA---FTEALA--S 220 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH---HHHHHH--H
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh---hHhhcc--C
Confidence 5889999997 9999999999999999 89999999 66655443 2 2221 1222222111 111111 2
Q ss_pred ccEEEECCChhh---HH-H---hhhccccCCEEEEEecC
Q 024011 209 VDVILDCMGASY---FQ-R---NLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 209 ~d~vi~~~g~~~---~~-~---~~~~l~~~g~~v~~g~~ 240 (274)
+|+|||+.+... -. . ..+.+.++..++++-..
T Consensus 221 ~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 259 (312)
T 3t4e_A 221 ADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYN 259 (312)
T ss_dssp CSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCS
T ss_pred ceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccC
Confidence 899999986421 11 1 12456666666666543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00046 Score=58.51 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=46.9
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCeEEEEecCh--hhHHHHHHc--CCC-EEE--eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSE--EKLAVCKDL--GAD-VCI--NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~--g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++||+|++|.+|..+++.+.+. |++|++++|+. ...+.+.++ +.. ..+ |..+.+....+.+. .++|+||
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi 78 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ---YQPDAVM 78 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh---cCCCEEE
Confidence 5899999999999999988887 79999999864 222222222 111 222 33332222222221 2589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+++|.
T Consensus 79 h~A~~ 83 (361)
T 1kew_A 79 HLAAE 83 (361)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99984
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0021 Score=59.73 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHH---cCCCEE-EeCCCCcHHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKD---LGADVC-INYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~---~g~~~~-~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.+++|||+||+|.+|..+++.+.+.|++|++++|+... .+.++. .+...+ .|..+.+....+.+. .++|
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~---~~~D 86 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---YKID 86 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---SCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh---CCCC
Confidence 46899999999999999999999999999999876432 222222 222222 233333222222222 2589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
+||++++.
T Consensus 87 ~Vih~A~~ 94 (699)
T 1z45_A 87 SVIHFAGL 94 (699)
T ss_dssp EEEECCSC
T ss_pred EEEECCcc
Confidence 99999984
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.006 Score=49.75 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=61.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-HcCC--CEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGA--DVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+. +++. ......+ +. .. ..+|+|||
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~l-------~~-~~~DivIn 187 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE--AL-------EG-QSFDIVVN 187 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--GG-------TT-CCCSEEEE
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--Hh-------cc-cCCCEEEE
Confidence 5899999997 8999999999999996 9999999998876654 4442 1222211 11 11 35899999
Q ss_pred CCChhhHH----HhhhccccCCEEEEEecC
Q 024011 215 CMGASYFQ----RNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 215 ~~g~~~~~----~~~~~l~~~g~~v~~g~~ 240 (274)
++...... -..+.++++..++++...
T Consensus 188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 188 ATSASLTADLPPLPADVLGEAALAYELAYG 217 (272)
T ss_dssp CSSGGGGTCCCCCCGGGGTTCSEEEESSCS
T ss_pred CCCCCCCCCCCCCCHHHhCcCCEEEEeecC
Confidence 98753211 123456777777777543
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0005 Score=56.90 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=47.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhh--HHHHHHcCCCEEEeCCCCcHHHHHHHHhCC---CCccEEEEC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEK--LAVCKDLGADVCINYKTEDFVARVKEETGG---KGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~d~vi~~ 215 (274)
++||+|++|.+|..+++.+.+.| .+|++++|+... .+.+.... ...|..+. +.+.+...+ .++|+||++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~---~~~~~~~~~~~~~~~d~vi~~ 75 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN--IADYMDKE---DFLIQIMAGEEFGDVEAIFHE 75 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC--CSEEEEHH---HHHHHHHTTCCCSSCCEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce--eccccccH---HHHHHHHhccccCCCcEEEEC
Confidence 48999999999999999999999 899999987654 22233222 11222222 233333332 259999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
++.
T Consensus 76 a~~ 78 (310)
T 1eq2_A 76 GAC 78 (310)
T ss_dssp CSC
T ss_pred ccc
Confidence 874
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00036 Score=54.51 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=34.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEK 176 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~ 176 (274)
+++++|+|++|.+|..+++.+.+.|. +|++++|++++
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~ 43 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA 43 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence 57899999999999999999999998 99999988765
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00054 Score=63.27 Aligned_cols=78 Identities=10% Similarity=0.011 Sum_probs=50.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.++++||+|++|.+|..+++.+.+. |++|++++|+.++.+.+.+...-..+..+-.+..+.+.+... ++|+||++++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih~Aa 391 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVA 391 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH--HCSEEEECCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc--CCCEEEECce
Confidence 4678999999999999999999887 899999999876543221111112222222221111222222 4899999987
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 392 ~ 392 (660)
T 1z7e_A 392 I 392 (660)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00048 Score=57.14 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=47.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++|||+|++|.+|..+++.+.+.|++|++++|+.+........+...+ .|..+.+ +.+... + |+||++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~----~~~~~~--~-d~vih~A~~ 72 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS----WGAGIK--G-DVVFHFAAN 72 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT----TTTTCC--C-SEEEECCSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH----HHhhcC--C-CEEEECCCC
Confidence 479999999999999999999999999999987654332211122211 1222222 222222 2 999999983
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00053 Score=58.50 Aligned_cols=32 Identities=9% Similarity=0.087 Sum_probs=29.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS 173 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~ 173 (274)
+|||+||+|.+|..+++.+.+.|. +|+..+++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 699999999999999999999998 99998874
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0028 Score=51.53 Aligned_cols=96 Identities=13% Similarity=0.122 Sum_probs=64.4
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
++|....+...+.+...--.|++++|.|++.-+|..+++++... |++|+++.++. .+..
T Consensus 138 ~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------------~~L~ 198 (281)
T 2c2x_A 138 LPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------------RDLP 198 (281)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------------SCHH
T ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------------hHHH
Confidence 34444444444444332346999999998656799999999999 89999876443 2222
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+. +. ..|+||.++|.+.+ ---++++++..++++|...
T Consensus 199 ~~----~~--~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 199 AL----TR--QADIVVAAVGVAHL-LTADMVRPGAAVIDVGVSR 235 (281)
T ss_dssp HH----HT--TCSEEEECSCCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred HH----Hh--hCCEEEECCCCCcc-cCHHHcCCCcEEEEccCCC
Confidence 22 22 38999999997653 2335678888888887653
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0006 Score=57.82 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=50.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-----CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCC-ccEEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG-----VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG-VDVIL 213 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g-----~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi 213 (274)
++++||+||+|.+|..+++.+.+.| ++|++++|+..... ....+. ..+..+-.+ .+.+.+...+.+ +|+||
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~-~~~~~Dl~d-~~~~~~~~~~~~~~d~vi 77 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPI-NYVQCDISD-PDDSQAKLSPLTDVTHVF 77 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCC-EEEECCTTS-HHHHHHHHTTCTTCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCce-EEEEeecCC-HHHHHHHHhcCCCCCEEE
Confidence 4689999999999999999999999 99999998865432 101111 222222222 223444443333 89999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 78 h~a~~ 82 (364)
T 2v6g_A 78 YVTWA 82 (364)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99873
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.012 Score=45.74 Aligned_cols=99 Identities=13% Similarity=0.141 Sum_probs=68.9
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~ 205 (274)
....++++++||-.|++ .|..+..+++. +.+|++++.+++.++.+++ .+.. .+...+..+. + ..
T Consensus 49 ~~l~~~~~~~vLDlGcG--~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---~---~~ 119 (204)
T 3njr_A 49 AALAPRRGELLWDIGGG--SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA---L---AD 119 (204)
T ss_dssp HHHCCCTTCEEEEETCT--TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG---G---TT
T ss_pred HhcCCCCCCEEEEecCC--CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh---c---cc
Confidence 44567889999999973 48888888887 8999999999998877653 3433 2233333221 1 11
Q ss_pred CCCccEEEECCChh--hHHHhhhccccCCEEEEEecC
Q 024011 206 GKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 ~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...+|+|+...+.. .+..+.+.|+++|+++.....
T Consensus 120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence 13599999776532 467778899999999987654
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0039 Score=51.82 Aligned_cols=87 Identities=13% Similarity=0.177 Sum_probs=63.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++.++ +.+.+.|.... +..+ +.. ..|+|+.+...
T Consensus 141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~------~l~e-ll~-----~aDvV~l~~p~ 206 (307)
T 1wwk_A 141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV------DLET-LLK-----ESDVVTIHVPL 206 (307)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC------CHHH-HHH-----HCSEEEECCCC
T ss_pred CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc------CHHH-HHh-----hCCEEEEecCC
Confidence 4789999996 999999999999999999999988776 45566675321 2222 222 27999988763
Q ss_pred hh-----H-HHhhhccccCCEEEEEec
Q 024011 219 SY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
.. + ...+..|+++..++.++.
T Consensus 207 ~~~t~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 207 VESTYHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp STTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred ChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence 21 2 346678888888888876
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00059 Score=55.38 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS- 219 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~- 219 (274)
+++||+|++|.+|..+++.+.+.|++|++++|+.++.. ..+ ...+..+-.+ .+.+.+... ++|+||++++..
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-~~~~~~Dl~d-~~~~~~~~~--~~d~vi~~a~~~~ 75 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAH-EEIVACDLAD-AQAVHDLVK--DCDGIIHLGGVSV 75 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTT-EEECCCCTTC-HHHHHHHHT--TCSEEEECCSCCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCC-ccEEEccCCC-HHHHHHHHc--CCCEEEECCcCCC
Confidence 57999999999999999999999999999998865311 011 1222222222 233444443 499999998742
Q ss_pred --hH-----------HHhhhcccc--CCEEEEEecCC
Q 024011 220 --YF-----------QRNLGSLNI--DGRLFIIGTQG 241 (274)
Q Consensus 220 --~~-----------~~~~~~l~~--~g~~v~~g~~~ 241 (274)
.. ...++.+.+ .++++.++...
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 112 (267)
T 3ay3_A 76 ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNH 112 (267)
T ss_dssp CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHH
Confidence 01 123333332 35888887653
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0035 Score=55.04 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=51.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++++|+| +|++|.++++.+.+.|++|++++|+.++.+.+.+ ++....+..+..+. +.+.+... ++|+||++++.
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~-~~l~~~l~--~~DvVIn~a~~ 78 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD-AALDAEVA--KHDLVISLIPY 78 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCH-HHHHHHHT--TSSEEEECCC-
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCH-HHHHHHHc--CCcEEEECCcc
Confidence 57899998 5999999999999999999999999887765543 33222222222222 23333343 49999999985
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.004 Score=51.05 Aligned_cols=90 Identities=16% Similarity=0.066 Sum_probs=59.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-HcCC---CEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGA---DVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
-.+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+. +++. ....+.++ . . ..+|+|
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---------l-~-~~aDiI 191 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---------L-K-QSYDVI 191 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---------C-C-SCEEEE
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---------h-c-CCCCEE
Confidence 36899999997 8999999999999997 9999999998876554 3332 12222111 1 1 358999
Q ss_pred EECCChhhHHH----hhhccccCCEEEEEec
Q 024011 213 LDCMGASYFQR----NLGSLNIDGRLFIIGT 239 (274)
Q Consensus 213 i~~~g~~~~~~----~~~~l~~~g~~v~~g~ 239 (274)
|++++...... ..+.++++..++++..
T Consensus 192 InaTp~gm~~~~~~l~~~~l~~~~~V~DlvY 222 (281)
T 3o8q_A 192 INSTSASLDGELPAIDPVIFSSRSVCYDMMY 222 (281)
T ss_dssp EECSCCCC----CSCCGGGEEEEEEEEESCC
T ss_pred EEcCcCCCCCCCCCCCHHHhCcCCEEEEecC
Confidence 99986432111 1345666555666654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00053 Score=57.80 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=48.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChh--hHHHHHHcC---CCEEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE--KLAVCKDLG---ADVCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~--~~~~~~~~g---~~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.+++|||+||+|.+|..+++.+...| .+|++.++... ..+.++.+. ....+ |..+.+....+.+ +.++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~~~ 99 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIK---ERDV 99 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH---HHTC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHh---hcCC
Confidence 46789999999999999999999999 67888776532 222222221 11222 3333332222222 2248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||++++.
T Consensus 100 d~Vih~A~~ 108 (346)
T 4egb_A 100 QVIVNFAAE 108 (346)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999984
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0017 Score=53.39 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=43.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|.+|..+++.+. .|++|++++|+.+ ....|..+.+ .+.+...+.++|+||++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------~~~~D~~d~~---~~~~~~~~~~~d~vih~a~~ 64 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------EFCGDFSNPK---GVAETVRKLRPDVIVNAAAH 64 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------SSCCCTTCHH---HHHHHHHHHCCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------cccccCCCHH---HHHHHHHhcCCCEEEECccc
Confidence 69999999999999999999 8999999998752 0112333322 22222211248999999874
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00079 Score=55.13 Aligned_cols=60 Identities=12% Similarity=0.202 Sum_probs=43.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|.+|..+++.+.+.|++|++++|.+ .|..+.+....+.+. .++|+||++++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------------~D~~d~~~~~~~~~~---~~~d~vi~~a~~ 66 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL--------------LDITNISQVQQVVQE---IRPHIIIHCAAY 66 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT--------------SCTTCHHHHHHHHHH---HCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc--------------cCCCCHHHHHHHHHh---cCCCEEEECCcc
Confidence 799999999999999999999999999999832 122222222222221 148999999874
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0015 Score=54.94 Aligned_cols=75 Identities=17% Similarity=0.130 Sum_probs=48.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChh--hHHHHHHcC-CC-EEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEE--KLAVCKDLG-AD-VCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~--~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
+++||+|++|.+|..+++.+.+. |++|++++|+.. ..+.+.++. .. ..+..+-.+ .+.+.+... ++|+||+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~vih 81 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD-AELVDKLAA--KADAIVH 81 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTC-HHHHHHHHT--TCSEEEE
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCC-HHHHHHHhh--cCCEEEE
Confidence 58999999999999999999888 899999998642 112222221 11 222222222 233444443 3799999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
+++.
T Consensus 82 ~A~~ 85 (348)
T 1oc2_A 82 YAAE 85 (348)
T ss_dssp CCSC
T ss_pred CCcc
Confidence 9984
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0045 Score=48.82 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=69.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|++|||.|+ |.+|...++.+...|++|++++.+.. .++.+.+.+.-......... +.. .++|+||-+.+
T Consensus 30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~------~dL--~~adLVIaAT~ 100 (223)
T 3dfz_A 30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE------EDL--LNVFFIVVATN 100 (223)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG------GGS--SSCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH------hHh--CCCCEEEECCC
Confidence 4788999997 99999999999999999999986543 34444443432322211110 011 35899999999
Q ss_pred hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcc-eEEEEee
Q 024011 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGIV 263 (274)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~~ 263 (274)
....+..+...++.|..+.+..... ...+-+..++.++ ++|.-+.
T Consensus 101 d~~~N~~I~~~ak~gi~VNvvD~p~-~~~f~~Paiv~rg~l~iaIST 146 (223)
T 3dfz_A 101 DQAVNKFVKQHIKNDQLVNMASSFS-DGNIQIPAQFSRGRLSLAIST 146 (223)
T ss_dssp CTHHHHHHHHHSCTTCEEEC------CCSEECCEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHhCCCEEEEeCCcc-cCeEEEeeEEEeCCEEEEEEC
Confidence 8776666555555666655544322 3355555555554 4444333
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00053 Score=59.73 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=34.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++++|||+||+|.+|..+++.+...|++|++++|+++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 45679999999999999999999889999999999877
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0053 Score=50.49 Aligned_cols=91 Identities=11% Similarity=0.192 Sum_probs=59.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC----CE--EEeCCCCcHHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA----DV--CINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~----~~--~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
.+++++|+|+ |++|.+++..+.+.| +|+++.|+.++.+.+. +++. .. ..+..+ + .+.. ..+|+
T Consensus 127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~--~----~~~~--~~~Di 196 (287)
T 1nvt_A 127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--L----DVDL--DGVDI 196 (287)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC--T----TCCC--TTCCE
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee--H----HHhh--CCCCE
Confidence 5789999998 599999999999999 9999999988765543 2211 00 011111 1 1111 35899
Q ss_pred EEECCChhhHH------H-hhhccccCCEEEEEec
Q 024011 212 ILDCMGASYFQ------R-NLGSLNIDGRLFIIGT 239 (274)
Q Consensus 212 vi~~~g~~~~~------~-~~~~l~~~g~~v~~g~ 239 (274)
+|+|+|..... - ..+.++++..++++..
T Consensus 197 lVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 197 IINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIY 231 (287)
T ss_dssp EEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred EEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence 99999864321 1 2355667777777765
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00059 Score=56.76 Aligned_cols=117 Identities=9% Similarity=0.077 Sum_probs=69.7
Q ss_pred cCcchHHHHHHHHHhh--------cC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCC-E
Q 024011 119 AFPEVACTVWSTVFMT--------SH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGAD-V 187 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~--------~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~-~ 187 (274)
.++|....+...+.+. .+ --.|++++|.|++.-+|..+++++...|++|+++.|+..++ +...+++.. +
T Consensus 147 ~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~ 226 (320)
T 1edz_A 147 ILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKH 226 (320)
T ss_dssp CCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCC
T ss_pred cCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcc
Confidence 4455555554445442 12 23689999999855679999999999999999998874432 111122211 1
Q ss_pred EE-e---CCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 188 CI-N---YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 188 ~~-~---~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.. . .+..+..+.+.+ .|+||.++|...+--.-++++++..++++|...
T Consensus 227 ~~t~~~~t~~~~L~e~l~~------ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 227 HVEDLGEYSEDLLKKCSLD------SDVVITGVPSENYKFPTEYIKEGAVCINFACTK 278 (320)
T ss_dssp EEEEEEECCHHHHHHHHHH------CSEEEECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred cccccccccHhHHHHHhcc------CCEEEECCCCCcceeCHHHcCCCeEEEEcCCCc
Confidence 00 0 100223333322 899999999754212234578887888888754
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0013 Score=53.22 Aligned_cols=66 Identities=17% Similarity=0.104 Sum_probs=46.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|+|++|.+|..+++.+.+ |++|++++|+++.. .+ ...|..+.+....+.+.. ++|+||+++|.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----~~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~ 67 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----GG--YKLDLTDFPRLEDFIIKK---RPDVIINAAAM 67 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----TC--EECCTTSHHHHHHHHHHH---CCSEEEECCCC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----CC--ceeccCCHHHHHHHHHhc---CCCEEEECCcc
Confidence 589999999999999999985 89999999886421 12 334444433233322221 48999999984
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.001 Score=54.50 Aligned_cols=91 Identities=12% Similarity=0.022 Sum_probs=58.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+. . ... . .+.+.+.. ..+|+||++++
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~-~~~-----~-~~~~~~~~--~~aDiVInaTp 184 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-I-NKI-----N-LSHAESHL--DEFDIIINTTP 184 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-C-EEE-----C-HHHHHHTG--GGCSEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-c-ccc-----c-HhhHHHHh--cCCCEEEECcc
Confidence 5789999997 8999999999999999 899999998876544321 1 111 1 22233322 23899999986
Q ss_pred hhhHHH-----hhhccccCCEEEEEecC
Q 024011 218 ASYFQR-----NLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~~~~-----~~~~l~~~g~~v~~g~~ 240 (274)
...... ..+.++++..++++...
T Consensus 185 ~Gm~~~~~~~l~~~~l~~~~~V~D~vY~ 212 (277)
T 3don_A 185 AGMNGNTDSVISLNRLASHTLVSDIVYN 212 (277)
T ss_dssp -------CCSSCCTTCCSSCEEEESCCS
T ss_pred CCCCCCCcCCCCHHHcCCCCEEEEecCC
Confidence 431111 23456777777777654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00096 Score=54.66 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=59.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|||+|+ |.+|..+++.+.+.|++|++++|+.+++. .+...+ .|..+.+.. .+... ..+|+||++++.
T Consensus 3 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~---~~~~~-~~~d~vih~a~~ 73 (286)
T 3gpi_A 3 LSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTRPDTL---ASIVH-LRPEILVYCVAA 73 (286)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCC----TTCCEEECCTTCGGGC---TTGGG-GCCSEEEECHHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCceEEccCCChHHH---HHhhc-CCCCEEEEeCCC
Confidence 467999995 99999999999999999999999876531 222322 233332221 22221 139999999874
Q ss_pred hh-------------HHHhhhccccC--CEEEEEecCC
Q 024011 219 SY-------------FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 219 ~~-------------~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
.. ....++.+... .+++.++...
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~ 111 (286)
T 3gpi_A 74 SEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG 111 (286)
T ss_dssp HHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccE
Confidence 21 23344445433 5888887643
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0015 Score=58.62 Aligned_cols=71 Identities=15% Similarity=0.245 Sum_probs=47.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+ ||+|.+++..+...|++|+++.|+.++.+.+. +++.. ..+.. +. . ......+|++|||+|
T Consensus 363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~-~~~~~--dl----~-~~~~~~~DilVN~ag 433 (523)
T 2o7s_A 363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGK-ALSLT--DL----D-NYHPEDGMVLANTTS 433 (523)
T ss_dssp ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CEETT--TT----T-TC--CCSEEEEECSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCc-eeeHH--Hh----h-hccccCceEEEECCC
Confidence 4678999998 79999999999999999999999988876654 44432 22221 11 1 111124899999998
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 434 v 434 (523)
T 2o7s_A 434 M 434 (523)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0035 Score=52.50 Aligned_cols=74 Identities=20% Similarity=0.226 Sum_probs=47.6
Q ss_pred EEEEecCCchHHHHHHHHHHHc---C---CeEEEEecChh--hHHHHHHc--CCC-EEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ---G---VRVFVTAGSEE--KLAVCKDL--GAD-VCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~---g---~~v~~~~~~~~--~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
++||+|++|.+|..+++.+.+. | ++|++++|+.. ..+.++.+ +.. ..+..+-.+ .+.+.+.. .++|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~--~~~d 78 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD-AGLLAREL--RGVD 78 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTC-HHHHHHHT--TTCC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCC-HHHHHHHh--cCCC
Confidence 6999999999999999999886 7 89999998542 11122222 112 222223222 23344444 3599
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
+||++++.
T Consensus 79 ~Vih~A~~ 86 (337)
T 1r6d_A 79 AIVHFAAE 86 (337)
T ss_dssp EEEECCSC
T ss_pred EEEECCCc
Confidence 99999984
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0015 Score=54.28 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=44.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++||+|++|.+|..+++.+...|++|+++.++.+ .|..+.+ .+.+.....++|+||++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~-------------~D~~d~~---~~~~~~~~~~~d~vih~a~~ 65 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------LNLLDSR---AVHDFFASERIDQVYLAAAK 65 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------CCTTCHH---HHHHHHHHHCCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc-------------CCccCHH---HHHHHHHhcCCCEEEEcCee
Confidence 468999999999999999999999999998876531 1222222 22222221148999999874
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0011 Score=52.56 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=66.1
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHH----cCCC--E-EEeCCCCcHHHHHHHHhCCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--V-CINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~~~~~ 207 (274)
...++++||-.|+ |.|..+..+++.. +.+|++++.+++.++.+++ .+.. . +...+..+. +.......
T Consensus 51 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~ 125 (233)
T 2gpy_A 51 KMAAPARILEIGT--AIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL---GEKLELYP 125 (233)
T ss_dssp HHHCCSEEEEECC--TTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS---HHHHTTSC
T ss_pred hccCCCEEEEecC--CCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH---HHhcccCC
Confidence 3457889999996 3688888888877 6799999999988777653 3432 2 222222221 22221124
Q ss_pred CccEEEECCCh----hhHHHhhhccccCCEEEEEec
Q 024011 208 GVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 208 ~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~ 239 (274)
.+|+|+.+... ..+..+.+.++++|+++....
T Consensus 126 ~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 126 LFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp CEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 59999876653 235777889999999988643
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0039 Score=54.85 Aligned_cols=91 Identities=20% Similarity=0.177 Sum_probs=67.4
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
--.|+++.|.|. |.+|..+++.++..|++|++++++..+...+...|... .+ +.+... ..|+|+.+.
T Consensus 254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~------~~----l~ell~--~aDiVi~~~ 320 (479)
T 1v8b_A 254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV------VT----LDEIVD--KGDFFITCT 320 (479)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE------CC----HHHHTT--TCSEEEECC
T ss_pred ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe------cC----HHHHHh--cCCEEEECC
Confidence 346899999995 99999999999999999999999987654444555422 12 222332 389999987
Q ss_pred Chhh--HHHhhhccccCCEEEEEecC
Q 024011 217 GASY--FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 217 g~~~--~~~~~~~l~~~g~~v~~g~~ 240 (274)
+... ....++.|+++..++.++..
T Consensus 321 ~t~~lI~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 321 GNVDVIKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp SSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred ChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence 6533 24667889999988888764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0026 Score=66.83 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=53.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhH-------HHHHHcCCCEEE---eCCCCcHHHHHHHHh-C
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL-------AVCKDLGADVCI---NYKTEDFVARVKEET-G 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~-------~~~~~~g~~~~~---~~~~~~~~~~~~~~~-~ 205 (274)
.++++++|+|+++|+|.++++.+.+.|++ |++++|+..+. +.+++.|..... |..+.+..+.+.+.. .
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 57899999999999999999999999996 77788875432 223344544332 333332222222211 1
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
-.++|++|+|+|.
T Consensus 1962 ~g~id~lVnnAgv 1974 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMV 1974 (2512)
T ss_dssp HSCEEEEEECCCC
T ss_pred cCCCcEEEECCCc
Confidence 1359999999984
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0096 Score=51.61 Aligned_cols=95 Identities=13% Similarity=0.232 Sum_probs=68.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+|+|.|. |.+|..+++.+...|.+|+++++++++.+.+++.|...+. |..+.+. + +..+-..+|+||.+.+.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~---L-~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDL---L-ESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHH---H-HHTTTTTCSEEEECCSS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHH---H-HhcCCCccCEEEECCCC
Confidence 456999997 9999999999999999999999999999999988866443 3333222 2 33334568999999986
Q ss_pred hhH----HHhhhccccCCEEEEEec
Q 024011 219 SYF----QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~~----~~~~~~l~~~g~~v~~g~ 239 (274)
... -...+.+.+..+++....
T Consensus 79 ~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 79 PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 532 233445556667776544
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0044 Score=54.70 Aligned_cols=90 Identities=17% Similarity=0.138 Sum_probs=66.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|+++.|.|. |.+|..+++.++..|++|++++++..+.......|... .+ +.+... ..|+|+.+.+
T Consensus 275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~------~~----l~ell~--~aDiVi~~~~ 341 (494)
T 3d64_A 275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV------VT----MEYAAD--KADIFVTATG 341 (494)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE------CC----HHHHTT--TCSEEEECSS
T ss_pred cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe------CC----HHHHHh--cCCEEEECCC
Confidence 46899999996 99999999999999999999999887653444445432 12 222332 3899999986
Q ss_pred hhh--HHHhhhccccCCEEEEEecC
Q 024011 218 ASY--FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~--~~~~~~~l~~~g~~v~~g~~ 240 (274)
... ....++.|+++..++.++..
T Consensus 342 t~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 342 NYHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp SSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred cccccCHHHHhhCCCCcEEEEcCCC
Confidence 432 24667889998888888764
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.025 Score=43.56 Aligned_cols=100 Identities=11% Similarity=0.079 Sum_probs=68.2
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~ 205 (274)
....++++++||-.|++ .|..+..+++.. ..++++++.+++.++.+++ .+.+ .+...+..+. + ..
T Consensus 34 ~~l~~~~~~~vLDiG~G--~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~---~~ 105 (204)
T 3e05_A 34 SKLRLQDDLVMWDIGAG--SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---L---DD 105 (204)
T ss_dssp HHTTCCTTCEEEEETCT--TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT---C---TT
T ss_pred HHcCCCCCCEEEEECCC--CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh---h---hc
Confidence 45578899999999973 488888888875 3799999999998877653 3332 2222222111 0 11
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEEecC
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...+|+|+.+... ..+..+.+.|+++|+++.....
T Consensus 106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 1349999987653 3467788899999999987543
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00023 Score=59.20 Aligned_cols=36 Identities=22% Similarity=0.222 Sum_probs=33.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+++|||+|++|.+|..+++.+.+.|++|++++|+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 689999999999999999999999999999998765
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0014 Score=54.41 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=46.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|.+|..+++.+.+.|++|++++|.... .+.+. .+...+ .|..+.+..+.+.+. .++|.||++++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~---~~~d~vi~~a~~ 76 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFRE---FRPTHVSHQAAQ 76 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHH---HCCSEEEECCSC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHh---cCCCEEEECccc
Confidence 68999999999999999999999999999874332 11111 122222 233332222222221 248999999874
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0067 Score=51.31 Aligned_cols=89 Identities=20% Similarity=0.202 Sum_probs=63.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++....+.+.+.|.... .++ +++ .. ..|+|+.+...
T Consensus 163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l-~el---l~--~aDvV~l~~Pl 230 (351)
T 3jtm_A 163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----EDL-NEM---LP--KCDVIVINMPL 230 (351)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SCH-HHH---GG--GCSEEEECSCC
T ss_pred cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CCH-HHH---Hh--cCCEEEECCCC
Confidence 5899999996 999999999999999999999988766666666665332 122 222 21 27888887763
Q ss_pred h-----h-HHHhhhccccCCEEEEEec
Q 024011 219 S-----Y-FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~-----~-~~~~~~~l~~~g~~v~~g~ 239 (274)
. . ....+..|+++..++.++.
T Consensus 231 t~~t~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 231 TEKTRGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp CTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred CHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence 1 1 2456677888877777765
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0042 Score=50.27 Aligned_cols=95 Identities=8% Similarity=0.067 Sum_probs=68.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.++.+||..|+ |. |..+..+++.. +.++++++.+++.++.+++.... .....+..+. ......+|+|+.+
T Consensus 84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~------~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL------PFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC------SBCTTCEEEEEEE
T ss_pred CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhC------CCCCCceeEEEEe
Confidence 57889999997 44 88888888876 78999999999998888765543 2222222221 0122459999975
Q ss_pred CChhhHHHhhhccccCCEEEEEecC
Q 024011 216 MGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.....+....+.|+++|+++.+...
T Consensus 156 ~~~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 156 YAPCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp SCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred CChhhHHHHHHhcCCCcEEEEEEcC
Confidence 5545578889999999999987543
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0025 Score=50.83 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=67.0
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhC----
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETG---- 205 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~---- 205 (274)
...++++||-.|+ |.|..+..+++.. +.+++.++.+++.++.+++ .+....+.....+..+.+.....
T Consensus 57 ~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 57 KISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp HHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred HhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccc
Confidence 3457889999986 4688888888887 5799999999988776653 34321111112233332332211
Q ss_pred ---------C-CCccEEEECCChh----hHHHhhhccccCCEEEEEec
Q 024011 206 ---------G-KGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 206 ---------~-~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~ 239 (274)
. ..+|+|+...... .+..+.+.|+++|.++....
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 1 4599999877643 25677788999999997653
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.014 Score=46.83 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=70.1
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC----EEEeCCCCcHHHHHHHHhCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD----VCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~ 206 (274)
+.....++++++||-.|+ |.|..+..+++..++++++++.+++.++.+++.... .....+..+. ....
T Consensus 47 ~~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~------~~~~ 118 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK------EFPE 118 (266)
T ss_dssp HTTTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC------CCCT
T ss_pred HHHhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC------CCCC
Confidence 335556788999999996 468888888887799999999999999888865432 1222222111 1123
Q ss_pred CCccEEEECCChh---------hHHHhhhccccCCEEEEEec
Q 024011 207 KGVDVILDCMGAS---------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 207 ~~~d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g~ 239 (274)
..+|+|+.+..-. .+..+.+.|+++|++++...
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 4699998765422 24667788999999998754
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0042 Score=49.86 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=67.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
...++++||-.|+ |.|..+..+++.. +.+|+.++.+++.++.+++ .+....+.....+..+.+........+
T Consensus 60 ~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 3456889999996 4588888888876 5799999999988776653 343211111122333333333223469
Q ss_pred cEEEECCChh----hHHHhhhccccCCEEEEEecCC
Q 024011 210 DVILDCMGAS----YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 210 d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|+|+-..... .+..+.+.|+++|.++.-....
T Consensus 138 D~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 138 DLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 9998554432 3677788999999998766543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=54.49 Aligned_cols=69 Identities=19% Similarity=0.236 Sum_probs=46.4
Q ss_pred EEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|.+|..+++.+.+. |.+|++++|+....+ +...+ .|..+.+. +.+.....++|+||++++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~---~~~~~~~~~~d~vih~a~~ 72 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDE---IDRAVEKYSIDAIFHLAGI 72 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHH---HHHHHHHTTCCEEEECCCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHH---HHHHHhhcCCcEEEECCcc
Confidence 4899999999999999988887 789999988755422 22222 23333222 3222221259999999984
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.015 Score=48.81 Aligned_cols=87 Identities=11% Similarity=0.014 Sum_probs=63.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|- |.+|..+++.++..|++|++.+++.+. +.+.+.|... .++. + ... ..|+|+.+...
T Consensus 164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~------~~l~-e---ll~--~aDvV~l~~P~ 229 (335)
T 2g76_A 164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ------LPLE-E---IWP--LCDFITVHTPL 229 (335)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE------CCHH-H---HGG--GCSEEEECCCC
T ss_pred CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee------CCHH-H---HHh--cCCEEEEecCC
Confidence 5789999996 999999999999999999999987665 3455667542 1222 2 222 37999988764
Q ss_pred hh-----H-HHhhhccccCCEEEEEec
Q 024011 219 SY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
.. + ...++.|+++..++.++.
T Consensus 230 t~~t~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 230 LPSTTGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp CTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred CHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 21 2 356788899888888876
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0072 Score=49.88 Aligned_cols=100 Identities=21% Similarity=0.163 Sum_probs=69.7
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHHHHH
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEE 203 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~ 203 (274)
+.....++++++||-.|+ |.|..+..+++..|++|+.++.+++.++.+++ .+.. .+...+..+ .
T Consensus 64 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~ 134 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-------F 134 (302)
T ss_dssp HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-------C
T ss_pred HHHHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-------c
Confidence 335567889999999997 45888889998888999999999998877753 3322 122222211 1
Q ss_pred hCCCCccEEEECCCh----------------hhHHHhhhccccCCEEEEEecCC
Q 024011 204 TGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
...+|+|+.+..- ..+..+.+.|+++|++++.....
T Consensus 135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 3469999875432 22566778899999999876543
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.017 Score=45.18 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=54.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+++|.|+ |.+|..+++.+...|.+|+++++++++.+.+.+ .+.. ++..+..+ .+.+.+. +-..+|++|-+.+...
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~-~~~l~~a-~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSH-KEILRDA-EVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTS-HHHHHHH-TCCTTCEEEECCSCHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCC-HHHHHhc-CcccCCEEEEecCCcH
Confidence 4889997 999999999999999999999999998887654 4543 34333332 2223332 2345899999998764
Q ss_pred H
Q 024011 221 F 221 (274)
Q Consensus 221 ~ 221 (274)
.
T Consensus 78 ~ 78 (218)
T 3l4b_C 78 V 78 (218)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.01 Score=49.44 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=61.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|+++.|.|. |.+|..+++.++..|++|++.+++.++. .+.+.|.... +..+.+. ..|+|+.+..
T Consensus 140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~------~l~ell~------~aDvVvl~~P 205 (313)
T 2ekl_A 140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAV------SLEELLK------NSDVISLHVT 205 (313)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEEC------CHHHHHH------HCSEEEECCC
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceec------CHHHHHh------hCCEEEEecc
Confidence 35889999996 9999999999999999999999887764 3556665421 2222222 2688888775
Q ss_pred hhh-----H-HHhhhccccCCEEEEEec
Q 024011 218 ASY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
... + ...+..|+++..++.++.
T Consensus 206 ~~~~t~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 206 VSKDAKPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred CChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence 321 1 345667777777776655
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.025 Score=46.28 Aligned_cols=66 Identities=20% Similarity=0.132 Sum_probs=49.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+|.|+|. |.+|..+++.+.+.|.+|++.+|++++.+.+.+.+.... .+..+.+. ..|+||.+...
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~------~aDvvi~~vp~ 67 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----ATPCEVVE------SCPVTFAMLAD 67 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHH------HCSEEEECCSS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHh------cCCEEEEEcCC
Confidence 57889996 999999999999999999999999999888877664321 22222222 16888888774
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=96.68 E-value=0.012 Score=50.14 Aligned_cols=89 Identities=11% Similarity=0.076 Sum_probs=63.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|+++.|.|. |.+|..+++.++..|++ |++.+++....+.+.+.|.... .++. ++.. ..|+|+.+..
T Consensus 163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~-ell~-----~aDvV~l~~P 230 (364)
T 2j6i_A 163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----ENIE-ELVA-----QADIVTVNAP 230 (364)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SSHH-HHHH-----TCSEEEECCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CCHH-HHHh-----cCCEEEECCC
Confidence 5899999996 99999999999999997 9999988766666666664321 1222 2221 2799998876
Q ss_pred hh-----hH-HHhhhccccCCEEEEEec
Q 024011 218 AS-----YF-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~-----~~-~~~~~~l~~~g~~v~~g~ 239 (274)
.. .+ ...+..|+++..++.++.
T Consensus 231 ~t~~t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 231 LHAGTKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 42 12 345677888877777765
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0092 Score=46.24 Aligned_cols=99 Identities=12% Similarity=-0.020 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHhCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~ 206 (274)
+...++++++||-.|++ .|..+..+++. +.+|+.++.+++.++.+++ .+.. .+...+..+. ....
T Consensus 71 ~~l~~~~~~~vLdiG~G--~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------~~~~ 141 (210)
T 3lbf_A 71 ELLELTPQSRVLEIGTG--SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG------WQAR 141 (210)
T ss_dssp HHTTCCTTCEEEEECCT--TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC------CGGG
T ss_pred HhcCCCCCCEEEEEcCC--CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC------CccC
Confidence 45577899999999973 57788887777 8899999999988777653 3432 2222221110 1112
Q ss_pred CCccEEEECCChhh-HHHhhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~ 240 (274)
..+|+|+.+..... .....+.|+++|+++..-..
T Consensus 142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhHHHHHhcccCcEEEEEEcC
Confidence 45999998766543 45678899999998876443
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0081 Score=46.75 Aligned_cols=99 Identities=20% Similarity=0.123 Sum_probs=67.6
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~ 204 (274)
+...++++++||..|+ |.|..+..+++..+ .+++.++.+++.++.+++ .+.. .....+... .. .
T Consensus 71 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~---~ 142 (215)
T 2yxe_A 71 ELLDLKPGMKVLEIGT--GCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL---GY---E 142 (215)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG---CC---G
T ss_pred HhhCCCCCCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc---CC---C
Confidence 4457788999999997 35888888888876 799999999988776653 2322 112222111 01 1
Q ss_pred CCCCccEEEECCChhh-HHHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~ 239 (274)
....+|+|+.+..... ...+.+.|+++|++++.-.
T Consensus 143 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence 1235999998776543 4677889999999987744
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.016 Score=48.27 Aligned_cols=89 Identities=16% Similarity=0.122 Sum_probs=62.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+|.|+|. |.+|..+++.+++.|. +|++.++++++++.+.+.|.. ... .+..+. .. ...|+||.++.
T Consensus 34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~-~~~~~~------~~--~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-TSIAKV------ED--FSPDFVMLSSP 103 (314)
T ss_dssp SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-SCTTGG------GG--GCCSEEEECSC
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc-CCHHHH------hh--ccCCEEEEeCC
Confidence 68999996 9999999999999999 999999999999888888763 222 111110 11 23799999987
Q ss_pred hhhHH----HhhhccccCCEEEEEec
Q 024011 218 ASYFQ----RNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~~~~----~~~~~l~~~g~~v~~g~ 239 (274)
..... .....++++..++.++.
T Consensus 104 ~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp GGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred HHHHHHHHHHHhhccCCCcEEEECCC
Confidence 64433 33444566666665544
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.016 Score=45.02 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=51.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cC-----CCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-----ADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g-----~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
+++|+|++|.+|..+++.+.+.|.+|++++|++++.+.+.+ .+ .+.. ..+..+.+. +.|+||.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~D~Vi~~ 71 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT----GMKNEDAAE------ACDIAVLT 71 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE----EEEHHHHHH------HCSEEEEC
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC----hhhHHHHHh------cCCEEEEe
Confidence 58899977999999999999999999999999887766543 23 1221 122322222 37999999
Q ss_pred CChhhHHHhh
Q 024011 216 MGASYFQRNL 225 (274)
Q Consensus 216 ~g~~~~~~~~ 225 (274)
+........+
T Consensus 72 ~~~~~~~~~~ 81 (212)
T 1jay_A 72 IPWEHAIDTA 81 (212)
T ss_dssp SCHHHHHHHH
T ss_pred CChhhHHHHH
Confidence 9865444443
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.012 Score=45.46 Aligned_cols=144 Identities=15% Similarity=0.158 Sum_probs=83.5
Q ss_pred CCCCCEEEEEecCCeeeeEEe-eeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 79 WKVGDQVCALLGGGGYAEKVA-VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~-~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
++.|+.+.... .|.+|.. .+....+.+++.+++..... .........+.. .++++++||-.|++. |..+.
T Consensus 6 ~~~~~~~~~~p---~w~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~l~~--~~~~~~~vLDiG~G~--G~~~~ 76 (205)
T 3grz_A 6 INLSRHLAIVP---EWEDYQPVFKDQEIIRLDPGLAFGTGNH--QTTQLAMLGIER--AMVKPLTVADVGTGS--GILAI 76 (205)
T ss_dssp EEEETTEEEEE---TTCCCCCSSTTCEEEEESCC-----CCH--HHHHHHHHHHHH--HCSSCCEEEEETCTT--SHHHH
T ss_pred EEECCcEEEec---cccccccCCCCceeEEecCCcccCCCCC--ccHHHHHHHHHH--hccCCCEEEEECCCC--CHHHH
Confidence 44566555553 3666666 66677788887776554321 111111112212 256789999999733 66666
Q ss_pred HHHHHcCC-eEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh----HHHhhh
Q 024011 158 QMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNLG 226 (274)
Q Consensus 158 ~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~ 226 (274)
.+++ .+. ++++++.+++.++.+++ .+.. .....+..+. ....+|+|+.+..... +..+.+
T Consensus 77 ~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--------~~~~fD~i~~~~~~~~~~~~l~~~~~ 147 (205)
T 3grz_A 77 AAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--------VDGKFDLIVANILAEILLDLIPQLDS 147 (205)
T ss_dssp HHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--------CCSCEEEEEEESCHHHHHHHGGGSGG
T ss_pred HHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--------CCCCceEEEECCcHHHHHHHHHHHHH
Confidence 6665 455 99999999988776653 2332 2233332221 1245999998766443 456667
Q ss_pred ccccCCEEEEEecC
Q 024011 227 SLNIDGRLFIIGTQ 240 (274)
Q Consensus 227 ~l~~~g~~v~~g~~ 240 (274)
.|+++|+++.....
T Consensus 148 ~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 148 HLNEDGQVIFSGID 161 (205)
T ss_dssp GEEEEEEEEEEEEE
T ss_pred hcCCCCEEEEEecC
Confidence 88999999986543
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0041 Score=51.15 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=31.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+|||+||+|-+|..+++.+.+.|++|++++|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6999999999999999999999999999998754
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.032 Score=40.90 Aligned_cols=95 Identities=18% Similarity=0.142 Sum_probs=59.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHHHH---cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKD---LGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.++++|.|+ |.+|..+++.+...|.+|++++++ +++.+.+.+ .+. .++..+..+ .+.+.+. +-.+.|.|+-+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~~-~~~l~~a-~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSND-SSVLKKA-GIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTTS-HHHHHHH-TTTTCSEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCCC-HHHHHHc-ChhhCCEEEEe
Confidence 467889996 999999999999999999999997 455554442 233 333333322 2223332 22458999999
Q ss_pred CChhhHHH----hhhccccCCEEEEEe
Q 024011 216 MGASYFQR----NLGSLNIDGRLFIIG 238 (274)
Q Consensus 216 ~g~~~~~~----~~~~l~~~g~~v~~g 238 (274)
.+....+. ..+.+.+..+++...
T Consensus 79 ~~~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 79 SDNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred cCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 98654332 233344445666543
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.004 Score=55.67 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=47.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|||+||+|.+|..+++.+...|++|++++|+..+.+ ....|..+. . .+.. .++|+||++++.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------~v~~d~~~~-~----~~~l--~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------KRFWDPLNP-A----SDLL--DGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------CEECCTTSC-C----TTTT--TTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------ceeecccch-h----HHhc--CCCCEEEECCCC
Confidence 679999999999999999999999999999999876531 122222211 1 1122 358999999884
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0041 Score=52.29 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.+++|||+|++|.+|..+++.+...|++|++++|+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 62 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT 62 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 4688999999999999999999999999999998643
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0031 Score=50.06 Aligned_cols=99 Identities=23% Similarity=0.199 Sum_probs=67.0
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCEE--EeCCCCcHHHHHHHHhCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVC--INYKTEDFVARVKEETGG 206 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~~~~ 206 (274)
+...++++++||..|+ |.|..+..+++..+.+|+.++.+++.++.+++ .+...+ ...+ .... ....
T Consensus 85 ~~l~~~~~~~vLdiG~--G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~---~~~~ 156 (235)
T 1jg1_A 85 EIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD---GSKG---FPPK 156 (235)
T ss_dssp HHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GGGC---CGGG
T ss_pred HhcCCCCCCEEEEEeC--CcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC---cccC---CCCC
Confidence 4446788999999997 36888888888777899999999887776653 343221 2222 1000 1112
Q ss_pred CCccEEEECCChhh-HHHhhhccccCCEEEEEec
Q 024011 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~ 239 (274)
.++|+|+.+..... ...+.+.|+++|+++..-.
T Consensus 157 ~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred CCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence 34899998776543 4677889999999887643
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.00075 Score=56.03 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=42.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++|||+|++|.+|..+++.+.+.|..+.+..++....+.+ ..+...+ .|..++++ .+... ++|+||++++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~----~~~~~--~~d~vih~a~~ 73 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-NEAARLVKADLAADDI----KDYLK--GAEEVWHIAAN 73 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-CTTEEEECCCTTTSCC----HHHHT--TCSEEEECCCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-CCCcEEEECcCChHHH----HHHhc--CCCEEEECCCC
Confidence 4699999999999999999999994444433333322221 1111111 23333222 22332 59999999883
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0034 Score=47.20 Aligned_cols=101 Identities=22% Similarity=0.257 Sum_probs=68.5
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~ 205 (274)
....++++++||-.|+ |.|..+..+++.. +.++++++.+++.++.+++ .+.. ..+..+..+ .+.. .
T Consensus 19 ~~~~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~--~ 91 (178)
T 3hm2_A 19 SALAPKPHETLWDIGG--GSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR---AFDD--V 91 (178)
T ss_dssp HHHCCCTTEEEEEEST--TTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG---GGGG--C
T ss_pred HHhcccCCCeEEEeCC--CCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh---hhhc--c
Confidence 4446788999999997 3488888888876 5799999999988777653 3433 222222211 1111 1
Q ss_pred CCCccEEEECCChh---hHHHhhhccccCCEEEEEecC
Q 024011 206 GKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 ~~~~d~vi~~~g~~---~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...+|+|+.+.... .+..+.+.|+++|+++.....
T Consensus 92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred CCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence 14599999766543 477888999999999977543
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.021 Score=48.27 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=62.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++.. .+.+.+.|.... .+..+.+. ..|+|+.+...
T Consensus 159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~------~aDiV~l~~Pl 225 (352)
T 3gg9_A 159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVA-----ESKDALFE------QSDVLSVHLRL 225 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEEC-----SSHHHHHH------HCSEEEECCCC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEe-----CCHHHHHh------hCCEEEEeccC
Confidence 4789999996 99999999999999999999998753 344556665321 12222222 26999887753
Q ss_pred h------hHHHhhhccccCCEEEEEec
Q 024011 219 S------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~------~~~~~~~~l~~~g~~v~~g~ 239 (274)
. .....+..|+++..++.++.
T Consensus 226 t~~t~~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 226 NDETRSIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred cHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 2 12456778888888888875
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.015 Score=48.25 Aligned_cols=99 Identities=25% Similarity=0.360 Sum_probs=67.6
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----CCC---EEEeCCCCcHHHHHHHH
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD---VCINYKTEDFVARVKEE 203 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~ 203 (274)
+.+...++++++||-.|+ |.|..+..+++..|++|++++.+++.++.+++. +.. .....+..++
T Consensus 82 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------- 152 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF------- 152 (318)
T ss_dssp HHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-------
T ss_pred HHHhcCCCCcCEEEEEcc--cchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-------
Confidence 335567789999999997 348888888887799999999999988777642 321 1222221111
Q ss_pred hCCCCccEEEEC-----CCh----hhHHHhhhccccCCEEEEEecC
Q 024011 204 TGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 204 ~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
. ..+|+|+.+ .+. ..+..+.+.|+++|++++....
T Consensus 153 -~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 153 -A-EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp -C-CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -C-CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 1 459999876 321 1256677889999999986544
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.012 Score=49.33 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=58.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++.++.+.+.+.+.... +..+.+. ..|+|+.+...
T Consensus 154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~------~aDvVi~~vp~ 220 (330)
T 2gcg_A 154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELAA------QSDFIVVACSL 220 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHH------HCSEEEECCCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHHh------hCCEEEEeCCC
Confidence 4789999997 999999999999999999999988766655555553221 2222222 26888887753
Q ss_pred h-----hH-HHhhhccccCCEEEEEe
Q 024011 219 S-----YF-QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 219 ~-----~~-~~~~~~l~~~g~~v~~g 238 (274)
. .+ ...+..++++..++.++
T Consensus 221 ~~~t~~~i~~~~~~~mk~gailIn~s 246 (330)
T 2gcg_A 221 TPATEGLCNKDFFQKMKETAVFINIS 246 (330)
T ss_dssp CTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred ChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 2 11 24456677766665544
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0073 Score=48.42 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=69.8
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~ 204 (274)
....++++++||-.|++ .|..+..+++.. +.+++.++.+++.++.+++ .+.. ..+. ..+.. +..
T Consensus 87 ~~~~~~~~~~vldiG~G--~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~----~~~ 158 (255)
T 3mb5_A 87 AYAGISPGDFIVEAGVG--SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIK--LKDIY----EGI 158 (255)
T ss_dssp HHTTCCTTCEEEEECCT--TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEE--CSCGG----GCC
T ss_pred HhhCCCCCCEEEEecCC--chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEE--ECchh----hcc
Confidence 55678899999999973 488888888874 6799999999988777653 2432 2221 11211 112
Q ss_pred CCCCccEEEECCChh--hHHHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (274)
....+|+|+.+.... .+..+.+.|+++|+++....
T Consensus 159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 159 EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 334599999877654 47888899999999998754
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.035 Score=45.86 Aligned_cols=68 Identities=15% Similarity=0.041 Sum_probs=51.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.+|.|+|. |.+|..+++.+.+.|.+|++.+|++++.+.+.+.|.....+ +..+. . ...|+||.+....
T Consensus 8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~-~~~e~-------~--~~aDvvi~~vp~~ 75 (303)
T 3g0o_A 8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAA-SAREF-------A--GVVDALVILVVNA 75 (303)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEES-SSTTT-------T--TTCSEEEECCSSH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccC-CHHHH-------H--hcCCEEEEECCCH
Confidence 57999996 99999999999999999999999999998888877654121 11111 1 2368888887753
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.015 Score=44.45 Aligned_cols=99 Identities=18% Similarity=0.117 Sum_probs=62.5
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcC----------CeEEEEecChhhHHHHHHcCCCEEE-eCCCC--cHHHHH
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQG----------VRVFVTAGSEEKLAVCKDLGADVCI-NYKTE--DFVARV 200 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g----------~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~--~~~~~~ 200 (274)
...++++++||-.|+ |. |..+..+++..| .+|++++.++... ......+ ..+.. ...+.+
T Consensus 17 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 17 HQILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp HCCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHH
T ss_pred cCCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHH
Confidence 344688999999997 43 888888888876 7899999887431 1112223 22222 223333
Q ss_pred HHHhCCCCccEEEEC-----CCh-------------hhHHHhhhccccCCEEEEEec
Q 024011 201 KEETGGKGVDVILDC-----MGA-------------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~-----~g~-------------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
.+...+..+|+|+.. .+. ..+..+.+.|+++|++++.-.
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 333444469999953 332 124556788999999998744
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=96.56 E-value=0.023 Score=48.06 Aligned_cols=89 Identities=11% Similarity=0.095 Sum_probs=59.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHH-HcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
-.|+++.|.|. |.+|..+++.++ ..|++|++.+++.+..+...+.+.... .+..+.+. ..|+|+.+.
T Consensus 161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~------~aDvVil~v 228 (348)
T 2w2k_A 161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DSLEELAR------RSDCVSVSV 228 (348)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHHH------HCSEEEECC
T ss_pred CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHhc------cCCEEEEeC
Confidence 35889999996 999999999999 999999999998776655555554321 12222222 268888877
Q ss_pred Chhh-----H-HHhhhccccCCEEEEEe
Q 024011 217 GASY-----F-QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 217 g~~~-----~-~~~~~~l~~~g~~v~~g 238 (274)
.... + ...+..|+++..++.++
T Consensus 229 p~~~~t~~li~~~~l~~mk~gailin~s 256 (348)
T 2w2k_A 229 PYMKLTHHLIDEAFFAAMKPGSRIVNTA 256 (348)
T ss_dssp CCSGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred CCChHHHHHhhHHHHhcCCCCCEEEECC
Confidence 5321 1 23456677766665544
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.022 Score=46.46 Aligned_cols=90 Identities=14% Similarity=0.074 Sum_probs=60.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++|.|+|+ |.+|.++++.++..|. +|+++++++++.+.+++.|.......+ .. +.... ..|+||.++..
T Consensus 2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~---~~----~~~~~-~aDvVilavp~ 72 (281)
T 2g5c_A 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS---IA----KVEDF-SPDFVMLSSPV 72 (281)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC---GG----GGGGT-CCSEEEECSCH
T ss_pred cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCC---HH----HHhcC-CCCEEEEcCCH
Confidence 46889996 9999999999999998 999999999988888877753111111 11 11110 48999999986
Q ss_pred hhHHH----hhhccccCCEEEEEec
Q 024011 219 SYFQR----NLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~~~~----~~~~l~~~g~~v~~g~ 239 (274)
..... ....++++..++.++.
T Consensus 73 ~~~~~v~~~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 73 RTFREIAKKLSYILSEDATVTDQGS 97 (281)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred HHHHHHHHHHHhhCCCCcEEEECCC
Confidence 54333 3344566655555543
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.016 Score=48.34 Aligned_cols=88 Identities=8% Similarity=-0.000 Sum_probs=62.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|+++.|.|. |.+|..+++.++..|++|++.++ +.+. +.+.+.|... ..+..+ +.. ..|+|+.+..
T Consensus 145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~-----~~~l~e-ll~-----~aDvVil~~p 211 (320)
T 1gdh_A 145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATF-----HDSLDS-LLS-----VSQFFSLNAP 211 (320)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEE-----CSSHHH-HHH-----HCSEEEECCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEE-----cCCHHH-HHh-----hCCEEEEecc
Confidence 5789999996 99999999999999999999998 7665 3445566532 112222 222 2799998876
Q ss_pred hhh-----H-HHhhhccccCCEEEEEec
Q 024011 218 ASY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
... + ...+..|+++..++.++.
T Consensus 212 ~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 212 STPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 321 2 345677888877777765
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.018 Score=46.06 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=55.2
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+|+|.|++|.+|..+++.+... +++++.+....+.++.+....++.++|.+..+.........-..+.++|+-+.|-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 5889999999999999998866 8888866654444444444568888988766554444433333568999988874
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0098 Score=51.06 Aligned_cols=89 Identities=11% Similarity=-0.042 Sum_probs=62.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++.+..+...+.|.... .++ ++ ... ..|+|+.+...
T Consensus 190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l-~e---ll~--~aDvV~l~~Pl 257 (393)
T 2nac_A 190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATR-ED---MYP--VCDVVTLNCPL 257 (393)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSH-HH---HGG--GCSEEEECSCC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CCH-HH---HHh--cCCEEEEecCC
Confidence 5889999996 999999999999999999999988765555566665321 122 12 221 26888887653
Q ss_pred h-----hH-HHhhhccccCCEEEEEec
Q 024011 219 S-----YF-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~-----~~-~~~~~~l~~~g~~v~~g~ 239 (274)
. .+ ...+..|+++..++.++.
T Consensus 258 t~~t~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 258 HPETEHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp CTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred chHHHHHhhHHHHhhCCCCCEEEECCC
Confidence 2 12 355677787777776664
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.018 Score=46.30 Aligned_cols=34 Identities=24% Similarity=0.243 Sum_probs=30.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE 174 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~ 174 (274)
+++|+|.|+ |++|..+++.+.+.|. ++.+++++.
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 478999997 9999999999999998 898888776
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.022 Score=44.76 Aligned_cols=104 Identities=8% Similarity=0.070 Sum_probs=67.1
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHH----HcCCC-EEEeCCCCcHHHHHHHHhCC
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGAD-VCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~~~~~~~~~ 206 (274)
..+.+++.+||-.|+ +.|..+..+++.. +.+|+.++.+++.++.++ +.+.. .-+.....+..+.+.. ...
T Consensus 51 ~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~-~~~ 127 (221)
T 3dr5_A 51 TTNGNGSTGAIAITP--AAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR-LAN 127 (221)
T ss_dssp HSCCTTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG-SCT
T ss_pred hhCCCCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH-hcC
Confidence 334445569998885 6788888888875 679999999998876665 33432 1111122233332222 213
Q ss_pred CCccEEEECCChh----hHHHhhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~ 240 (274)
..||+||-..... .+..+.+.|+++|.++.-...
T Consensus 128 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 128 DSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp TCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred CCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4699998765432 367788999999999975544
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.011 Score=50.31 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=40.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGAD 186 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~ 186 (274)
-.|++++|.|. |.+|..+++.+...|++|++++++.++++.+ +++++.
T Consensus 171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~ 219 (364)
T 1leh_A 171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 219 (364)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred CCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence 46899999997 9999999999999999999999998877644 445653
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.031 Score=45.93 Aligned_cols=86 Identities=15% Similarity=0.056 Sum_probs=59.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-h
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-S 219 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~ 219 (274)
.++.|+|+ |.+|...+..+...|.+|+++++++++.+.+.+.|... ..+..+.+. ..|+||.++.. .
T Consensus 6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~------~~D~vi~~v~~~~ 73 (299)
T 1vpd_A 6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-----ASTAKAIAE------QCDVIITMLPNSP 73 (299)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CSSHHHHHH------HCSEEEECCSSHH
T ss_pred ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee-----cCCHHHHHh------CCCEEEEECCCHH
Confidence 36999996 99999999999999999999999999888887765422 122222222 27999999984 3
Q ss_pred hHHHhh-------hccccCCEEEEEe
Q 024011 220 YFQRNL-------GSLNIDGRLFIIG 238 (274)
Q Consensus 220 ~~~~~~-------~~l~~~g~~v~~g 238 (274)
.....+ ..++++..++.++
T Consensus 74 ~~~~~~~~~~~l~~~l~~~~~vv~~s 99 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPGTVLIDMS 99 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHHHHhCcchHhhcCCCCCEEEECC
Confidence 334333 3455555555543
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0024 Score=56.92 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=34.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.+.++|||+||+|.+|..+++.+...|.+|++++|+..
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 185 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 185 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSS
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCC
Confidence 34578999999999999999999888999999999877
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.024 Score=47.66 Aligned_cols=86 Identities=15% Similarity=0.217 Sum_probs=60.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++.++ +...+.|... .+..+.+. ..|+|+.+...
T Consensus 149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~------~~l~~~l~------~aDvVil~vp~ 214 (334)
T 2dbq_A 149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF------KPLEDLLR------ESDFVVLAVPL 214 (334)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE------CCHHHHHH------HCSEEEECCCC
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc------CCHHHHHh------hCCEEEECCCC
Confidence 4789999996 999999999999999999999998876 5555555421 12222222 26888888764
Q ss_pred hh-----H-HHhhhccccCCEEEEEe
Q 024011 219 SY-----F-QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g 238 (274)
.. + ...+..++++..++.++
T Consensus 215 ~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 215 TRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp CTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred ChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 32 2 24456677777676655
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.011 Score=45.26 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=65.4
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cCC--C-EEEeCCCCcHHHHHHHHhC
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGA--D-VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~--~-~~~~~~~~~~~~~~~~~~~ 205 (274)
..++++++||-.|+ |.|..+..+++..+ .++++++.+++.++.+++ .+. . .....+..++ .. ..
T Consensus 18 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~-~~ 90 (197)
T 3eey_A 18 MFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNM----DK-YI 90 (197)
T ss_dssp HHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGG----GG-TC
T ss_pred hcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH----hh-hc
Confidence 35688999999987 34778888888753 699999999988777653 332 1 2222222221 11 12
Q ss_pred CCCccEEEECCCh----------------hhHHHhhhccccCCEEEEEecC
Q 024011 206 GKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 ~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...+|+|+.+.+- ..+..+.+.|+++|+++.+...
T Consensus 91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 2459999876532 2367778899999999987543
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.022 Score=47.18 Aligned_cols=96 Identities=18% Similarity=0.144 Sum_probs=65.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHHHHHhCCCCc
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
++++++||-.|+ |.|..+..+++..|++|+.++.+++.++.+++ .+.. .....+..+. ......+
T Consensus 115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~f 186 (312)
T 3vc1_A 115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT------PFDKGAV 186 (312)
T ss_dssp CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC------CCCTTCE
T ss_pred CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC------CCCCCCE
Confidence 788999999986 45888888888779999999999988776653 3322 2222222211 0123469
Q ss_pred cEEEECCCh------hhHHHhhhccccCCEEEEEecC
Q 024011 210 DVILDCMGA------SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 210 d~vi~~~g~------~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
|+|+.+..- ..+..+.+.|+++|+++.....
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 999875432 2367778899999999987543
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.043 Score=42.98 Aligned_cols=100 Identities=18% Similarity=0.090 Sum_probs=65.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcC------CeEEEEecChhhHHHHHH----cC-----C-C-EEEeCCCCcHHH
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKD----LG-----A-D-VCINYKTEDFVA 198 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g------~~v~~~~~~~~~~~~~~~----~g-----~-~-~~~~~~~~~~~~ 198 (274)
.++++++||-.|++ .|..+..+++..+ .+|+.++.+++.++.+++ .+ . . .....+..+...
T Consensus 77 ~~~~~~~VLdiG~G--~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSG--SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCT--TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred hCCCCCEEEEECCC--CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence 57889999999973 3888888888765 599999999988776653 23 1 1 222222211110
Q ss_pred HHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEec
Q 024011 199 RVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~ 239 (274)
..... ...+|+|+.+.... ....+.+.|+++|++++.-.
T Consensus 155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence 00011 13599998877654 35777889999999887744
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.015 Score=48.74 Aligned_cols=88 Identities=13% Similarity=-0.003 Sum_probs=61.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++....+...+.|... .++. ++.+ ..|+|+.+...
T Consensus 144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~------~~l~-ell~-----~aDvV~l~~P~ 210 (330)
T 4e5n_A 144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ------VACS-ELFA-----SSDFILLALPL 210 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE------CCHH-HHHH-----HCSEEEECCCC
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee------CCHH-HHHh-----hCCEEEEcCCC
Confidence 4789999996 99999999999999999999998875555555555421 1222 2222 16888887653
Q ss_pred h-----h-HHHhhhccccCCEEEEEec
Q 024011 219 S-----Y-FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~-----~-~~~~~~~l~~~g~~v~~g~ 239 (274)
. . ....+..|+++..++.++.
T Consensus 211 t~~t~~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 211 NADTLHLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp STTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence 1 1 2356677888777777764
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.015 Score=47.51 Aligned_cols=89 Identities=19% Similarity=0.166 Sum_probs=60.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|.|+ |++|.+++..+...|++|++++|+.++.+.+. +++.. .. + +.. +.. ...|+||+++.
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~--~--~~~----~~~--~~aDiVi~atp 195 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VV--N--SPE----EVI--DKVQVIVNTTS 195 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-EC--S--CGG----GTG--GGCSEEEECSS
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-ee--h--hHH----hhh--cCCCEEEEeCC
Confidence 5789999997 89999999999999999999999988776654 34421 11 1 111 111 24899999987
Q ss_pred hhhHH---Hh--hhccccCCEEEEEec
Q 024011 218 ASYFQ---RN--LGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~~~~---~~--~~~l~~~g~~v~~g~ 239 (274)
..... .. ...++++..++.+..
T Consensus 196 ~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 196 VGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp TTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 54311 11 345667667776655
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0084 Score=48.06 Aligned_cols=100 Identities=16% Similarity=0.070 Sum_probs=69.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHc-----CCCEE--EeCCCCcHHHHHHHH
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL-----GADVC--INYKTEDFVARVKEE 203 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~-----g~~~~--~~~~~~~~~~~~~~~ 203 (274)
....++++++||-.|+ | .|..+..+++.. +.+++.++.+++.++.+++. +.+.+ ...+..+. .
T Consensus 90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~------~ 161 (258)
T 2pwy_A 90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA------E 161 (258)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC------C
T ss_pred HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc------C
Confidence 4567889999999997 3 488888888874 57999999999888777643 53222 22221111 0
Q ss_pred hCCCCccEEEECCChh--hHHHhhhccccCCEEEEEecC
Q 024011 204 TGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.....+|+|+.+.... .+..+.+.|+++|+++.+...
T Consensus 162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 162 LEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 2224599999766543 477888999999999987643
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.064 Score=44.45 Aligned_cols=67 Identities=16% Similarity=0.021 Sum_probs=50.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
-.+|.|+|. |.+|..+++.+...|.+|++.+|++++.+.+.+.|... ..+..+.+. ..|+||.+...
T Consensus 21 m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-----~~~~~~~~~------~aDvvi~~vp~ 87 (310)
T 3doj_A 21 MMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV-----CESPAEVIK------KCKYTIAMLSD 87 (310)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-----CSSHHHHHH------HCSEEEECCSS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE-----cCCHHHHHH------hCCEEEEEcCC
Confidence 367999996 99999999999999999999999999988888776532 122222222 16888888764
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0089 Score=47.38 Aligned_cols=103 Identities=18% Similarity=0.158 Sum_probs=66.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhC-C--C
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETG-G--K 207 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~-~--~ 207 (274)
..++++||-.|+ +.|..+..+++.. +.+++.++.+++.++.+++ .+....+.....+..+.+.+... . .
T Consensus 70 ~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 70 LTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred hcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 446789999986 4788888888876 5799999999988776653 34321111112233333333321 1 4
Q ss_pred CccEEEECCChh----hHHHhhhccccCCEEEEEecCC
Q 024011 208 GVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 208 ~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+|+||-..... .+..+.+.|+++|.++.-....
T Consensus 148 ~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 148 EFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp CEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred CcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 599998654422 3677888999999999865443
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.013 Score=45.87 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=65.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHHHHHhC-
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETG- 205 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~- 205 (274)
...++++||-.|+ |.|..+..+++.. +.+++.++.+++.++.+++ .+.. .+... +..+.+.....
T Consensus 55 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~~~ 129 (223)
T 3duw_A 55 QIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG---LALDSLQQIENE 129 (223)
T ss_dssp HHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CHHHHHHHHHHT
T ss_pred HhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---CHHHHHHHHHhc
Confidence 3456789999986 4688888888876 6799999999987766652 3432 22222 22232222211
Q ss_pred -CCCccEEEECCChh----hHHHhhhccccCCEEEEEecC
Q 024011 206 -GKGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 -~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...+|+|+-..... .+..+.+.|+++|.++.-...
T Consensus 130 ~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 130 KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 13599998655432 366778899999988876544
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.009 Score=47.01 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=66.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCC---
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGG--- 206 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~--- 206 (274)
...++++||-.|+ |.|..+..+++.. +.+++.++.+++.++.+++ .+....+.....+..+.+.+....
T Consensus 66 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 66 RLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp HHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred HhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCC
Confidence 3457789999986 4788888888875 5799999999888776653 343111111122333333332211
Q ss_pred CCccEEEECCCh----hhHHHhhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
..+|+|+..... ..+..+.+.++++|.++.....
T Consensus 144 ~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 144 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 459998876543 2367788999999999986654
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0092 Score=45.22 Aligned_cols=99 Identities=17% Similarity=0.173 Sum_probs=64.3
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHhCCC
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~ 207 (274)
...++++++||=.|+ |.|..+..+++. +.+|+.++.+++.++.+++ .+.+ .....+..+ +.... ..
T Consensus 17 ~~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~----l~~~~-~~ 88 (185)
T 3mti_A 17 AEVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHEN----LDHYV-RE 88 (185)
T ss_dssp HTTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGG----GGGTC-CS
T ss_pred HHhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHH----HHhhc-cC
Confidence 345788999999886 458888888877 8999999999998776653 3322 222211111 11112 34
Q ss_pred CccEEEECCCh----------------hhHHHhhhccccCCEEEEEecC
Q 024011 208 GVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 208 ~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.+|+|+-+.+. ..+..+.+.|+++|+++.+...
T Consensus 89 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 89 PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 59999866421 1135667889999999987654
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.031 Score=45.56 Aligned_cols=97 Identities=20% Similarity=0.180 Sum_probs=66.1
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----CC--C-EEEeCCCCcHHHHHHHHh
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCINYKTEDFVARVKEET 204 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~--~-~~~~~~~~~~~~~~~~~~ 204 (274)
.+...++++++||-.|+ |.|..+..+++..|++|+.++.+++.++.+++. +. . .+...+..+ .
T Consensus 57 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--------~ 126 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--------F 126 (287)
T ss_dssp HTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--------C
T ss_pred HHHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--------C
Confidence 35556788999999996 458888888877899999999999988777642 22 1 112222111 1
Q ss_pred CCCCccEEEECCCh---------hhHHHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
. ..+|+|+....- ..+..+.+.|+++|++++...
T Consensus 127 ~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 127 D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred C-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 1 459999865321 225667788999999987654
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.035 Score=46.58 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++.++. +.+. ... . .+.. ++.. ..|+|+.+...
T Consensus 145 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~~-~~~----~-~~l~-ell~-----~aDvV~l~~p~ 209 (333)
T 1j4a_A 145 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPE--LEKK-GYY----V-DSLD-DLYK-----QADVISLHVPD 209 (333)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHT-TCB----C-SCHH-HHHH-----HCSEEEECSCC
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcchh--HHhh-Cee----c-CCHH-HHHh-----hCCEEEEcCCC
Confidence 4789999996 9999999999999999999999887654 2332 221 1 1222 2222 26999988764
Q ss_pred hh-----H-HHhhhccccCCEEEEEec
Q 024011 219 SY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
.. + ...+..|++++.++.++.
T Consensus 210 ~~~t~~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 210 VPANVHMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp CGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred cHHHHHHHhHHHHhhCCCCcEEEECCC
Confidence 21 1 345677888887777765
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.029 Score=45.90 Aligned_cols=74 Identities=8% Similarity=0.074 Sum_probs=52.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
.++.|+|++|.+|..++..+...|.+|++++|++++.+.+.+.|... .+.. +.. ...|+||.++....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~---~~~~-------~~~--~~aDvVi~av~~~~ 79 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL---TDGD-------GWI--DEADVVVLALPDNI 79 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC---CCSS-------GGG--GTCSEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc---CCHH-------HHh--cCCCEEEEcCCchH
Confidence 47999997799999999999999999999999998888777766321 1111 111 23788888887654
Q ss_pred HHHhhh
Q 024011 221 FQRNLG 226 (274)
Q Consensus 221 ~~~~~~ 226 (274)
....++
T Consensus 80 ~~~v~~ 85 (286)
T 3c24_A 80 IEKVAE 85 (286)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.044 Score=44.52 Aligned_cols=84 Identities=12% Similarity=0.006 Sum_probs=57.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
++.|+|+ |.+|.+++..+.+.|.+|+++++++++.+.+.+.+.. ... . +. .+. ...|+||.++....
T Consensus 2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~-~---~~----~~~---~~~D~vi~av~~~~ 69 (279)
T 2f1k_A 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-Q---DL----SLL---QTAKIIFLCTPIQL 69 (279)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-S---CG----GGG---TTCSEEEECSCHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCcccc-C---CH----HHh---CCCCEEEEECCHHH
Confidence 5889996 9999999999999999999999999988888777653 111 1 11 111 24899999998654
Q ss_pred HHHhh----hccccCCEEEEE
Q 024011 221 FQRNL----GSLNIDGRLFII 237 (274)
Q Consensus 221 ~~~~~----~~l~~~g~~v~~ 237 (274)
....+ ..++++..++.+
T Consensus 70 ~~~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEEEC
T ss_pred HHHHHHHHHhhCCCCCEEEEC
Confidence 43333 334454455444
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.046 Score=45.32 Aligned_cols=87 Identities=15% Similarity=0.079 Sum_probs=59.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-h
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-S 219 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~ 219 (274)
.++.|.|+ |.+|...+..+...|.+|+++++++++.+.+.+.|... ..+..+.+. ..|+||.++.. .
T Consensus 31 ~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~------~~DvVi~av~~~~ 98 (316)
T 2uyy_A 31 KKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL-----GRTPAEVVS------TCDITFACVSDPK 98 (316)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE-----CSCHHHHHH------HCSEEEECCSSHH
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE-----cCCHHHHHh------cCCEEEEeCCCHH
Confidence 56999996 99999999999999999999999999888777766431 112222222 27999999984 3
Q ss_pred hHHHhh-------hccccCCEEEEEec
Q 024011 220 YFQRNL-------GSLNIDGRLFIIGT 239 (274)
Q Consensus 220 ~~~~~~-------~~l~~~g~~v~~g~ 239 (274)
.....+ ..+.++..++.++.
T Consensus 99 ~~~~v~~~~~~~~~~l~~~~~vv~~s~ 125 (316)
T 2uyy_A 99 AAKDLVLGPSGVLQGIRPGKCYVDMST 125 (316)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred HHHHHHcCchhHhhcCCCCCEEEECCC
Confidence 344333 33455555555543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 274 | ||||
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 3e-27 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 4e-27 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 3e-25 | |
| d1o89a1 | 146 | b.35.1.2 (A:1-115,A:293-323) Hypothetical protein | 4e-25 | |
| d1tt7a1 | 162 | b.35.1.2 (A:2-127,A:295-330) Hypothetical protein | 6e-25 | |
| d1yb5a1 | 150 | b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas | 9e-24 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 4e-23 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 5e-23 | |
| d1gu7a2 | 189 | c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea | 8e-23 | |
| d1qora1 | 147 | b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas | 1e-22 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 4e-22 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 2e-21 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 5e-20 | |
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 2e-19 | |
| d1yb5a2 | 174 | c.2.1.1 (A:121-294) Quinone oxidoreductase {Human | 7e-19 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 9e-19 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 2e-18 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 3e-18 | |
| d1xa0a2 | 176 | c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba | 8e-18 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 1e-17 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 1e-17 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 4e-17 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 5e-17 | |
| d1tt7a2 | 167 | c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac | 5e-17 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 7e-17 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 9e-17 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 6e-16 | |
| d1v3va2 | 182 | c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd | 1e-15 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 2e-15 | |
| d1o89a2 | 177 | c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc | 2e-15 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 2e-15 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 3e-15 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 1e-14 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 2e-14 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 3e-14 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 7e-14 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 7e-14 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 2e-13 | |
| d1iz0a2 | 171 | c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus | 2e-13 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 2e-13 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 9e-13 | |
| d1o8ca2 | 77 | c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc | 9e-13 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 2e-12 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 3e-12 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 1e-11 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 1e-11 | |
| d1jvba2 | 170 | c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo | 2e-11 | |
| d1vj1a2 | 187 | c.2.1.1 (A:125-311) Putative zinc-binding alcohol | 6e-11 | |
| d1llua2 | 166 | c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom | 3e-10 | |
| d1rjwa2 | 168 | c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu | 3e-10 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 6e-10 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 6e-10 | |
| d1v3va1 | 147 | b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd | 8e-06 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 3e-05 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 3e-04 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 5e-04 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 7e-04 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 0.001 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 0.002 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 0.002 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 0.003 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 0.004 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 0.004 |
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 102 bits (253), Expect = 3e-27
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
+S + AAA TV+ + T + P E FL H + G+G A Q K G ++ T
Sbjct: 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 60
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
G+ +K GA INY+ ED V R+KE TGGK V V+ D +G ++R+L L
Sbjct: 61 GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRR 120
Query: 232 GRLFIIGTQGGAKTELNIT------SLFAKRLTVQGIV 263
G + G GA T +N+ SL+ R ++QG +
Sbjct: 121 GLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYI 158
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 100 bits (250), Expect = 4e-27
Identities = 29/153 (18%), Positives = 61/153 (39%), Gaps = 10/153 (6%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+A V+ + + +Q + + + +VL++V +++N D L K
Sbjct: 4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSGVSL 114
PG++ +G + V R++ GD+V A + GGY+E + ++P+P G+
Sbjct: 64 PGIDLAGVV--VSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE- 120
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
+ A + L G + +
Sbjct: 121 RIAQEISLAELPQALKRILRGELR-GRTVVRLA 152
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 97.0 bits (240), Expect = 3e-25
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
+AA F T W ++ LSPGE L+H + G+G A+ + K G R++ TAGS+
Sbjct: 2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61
Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
K + LG + + ++ DF + E T G GVDV+L+ + QR + L GR
Sbjct: 62 KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFI 121
Query: 236 IIGTQGGAKTELNITSLFAKRLTVQGI 262
+G + + AK + +
Sbjct: 122 ELGKKDVYADASLGLAALAKSASFSVV 148
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 95.3 bits (236), Expect = 4e-25
Identities = 26/138 (18%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
++A+++ Q + +Q +++ ++ + +V + V ++LN D L G +
Sbjct: 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSGVSL 114
PG++ +GT+ + R+ G +V G GG AE+ V ++ +P G +
Sbjct: 61 PGIDFAGTVRTSEDP--RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118
Query: 115 KDAAAFPEVACTVWSTVF 132
K+ +
Sbjct: 119 KEISLSEAPNFAEAIINN 136
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 95.3 bits (236), Expect = 6e-25
Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 5/156 (3%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+A+ + + ++ + + D VLIKV + +N D L K +
Sbjct: 4 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLI 63
Query: 61 PGLECSGTILSVGKNVSR----WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G++ +GT++S + GG +E +VP ++P+P +SLK+
Sbjct: 64 LGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKE 123
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
A + + L + +
Sbjct: 124 AMVDQLLTIVDREVSLEE-TPGALKDILQNRIQGRV 158
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.0 bits (227), Expect = 9e-24
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A+ + + G PEVL+L+ ++ P KD +VLIKV A +N +T R G+Y
Sbjct: 3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 62
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
PG + +G I +VG N S +K GD+V GGYAE V +P + +
Sbjct: 63 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGS 122
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLV 145
+P + + G+ L+
Sbjct: 123 QYPLEKVAEAHENIIHGSGATGKMILL 149
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 91.1 bits (225), Expect = 4e-23
Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 32/173 (18%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G+P L+++EV+ P +VL+K+EA+ + D +G +P
Sbjct: 6 MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFI 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV-----------CALLGGGGY--------------- 94
PG E G + +VG V+R K GD+V C G
Sbjct: 64 PGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG 123
Query: 95 --AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
AE V V +P V + + M + G L
Sbjct: 124 GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQ--MRAGQIEGRIVLE 174
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 89.5 bits (221), Expect = 5e-23
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E G + AL+ GG AE+VAVP G +LP+P G +
Sbjct: 59 PGMEVV-----------GVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFP 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLV 145
A + + H G+ +
Sbjct: 108 FAEAEAAFRALLDRGHT--GKVVVR 130
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 90.5 bits (223), Expect = 8e-23
Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 10/161 (6%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG-TFAIQMGKCQGVRVFVT 170
+++ A T + + L+PG+ + + G + +A Q+GK
Sbjct: 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60
Query: 171 AGS----EEKLAVCKDLGADVCINYKTEDFVARVKE-----ETGGKGVDVILDCMGASYF 221
+E +A K+LGA I + + G + L+C+G
Sbjct: 61 IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120
Query: 222 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
LN +G + G + + K T G
Sbjct: 121 TGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGF 161
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 88.9 bits (219), Expect = 1e-22
Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 3/146 (2%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
I + G PEVLQ E ++E+ ++ +A +N DT R G YPPP S
Sbjct: 2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLG 61
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK--DAAA 119
V A G Y+ + A + +P+ + + +
Sbjct: 62 TEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQK 121
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLV 145
+P + S + G S L+
Sbjct: 122 YPLKDAQRAHEIL-ESRATQGSSLLI 146
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 88.8 bits (219), Expect = 4e-22
Identities = 34/193 (17%), Positives = 57/193 (29%), Gaps = 51/193 (26%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P
Sbjct: 7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV-I 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCAL-------------------------------- 88
G +G + SVG+ V++ K GD V L
Sbjct: 64 LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123
Query: 89 ----------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
+G ++E V V + + + + +
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE 183
Query: 133 MTSHLSPGESFLV 145
+ + +
Sbjct: 184 LMHSGKSIRTVVK 196
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 87.3 bits (215), Expect = 2e-21
Identities = 33/193 (17%), Positives = 57/193 (29%), Gaps = 51/193 (26%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V + P L ++E+E +E+ IK+ AT + D L G
Sbjct: 9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTD-LYHLFEGKHKDGFPVV 65
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCA--------------------------------- 87
G E +G + SVG V+ ++ G++V
Sbjct: 66 LGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMS 125
Query: 88 ---------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
LG +++ V V + V L + +V +
Sbjct: 126 PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAID 185
Query: 133 MTSHLSPGESFLV 145
+ H + L
Sbjct: 186 LMKHGKCIRTVLS 198
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 82.6 bits (203), Expect = 5e-20
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 1/153 (0%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
V ++ T ++P SF+ G + + + C +
Sbjct: 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
E +L + K LGA IN KT+D VA +KE T G + ++ + +L I
Sbjct: 61 IVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL 120
Query: 232 GRLFIIG-TQGGAKTELNITSLFAKRLTVQGIV 263
G++ ++G Q G + ++ L T+ G+V
Sbjct: 121 GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVV 153
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 81.8 bits (201), Expect = 2e-19
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 38/181 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+ I I + + + + D ++ IK+EA + +D G + K
Sbjct: 7 FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK-MPLV 65
Query: 61 PGLECSGTILSVGKN-VSRWKVGDQVCA-------------------------------- 87
G E G ++ +G S KVG +V
Sbjct: 66 VGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY 125
Query: 88 ---LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFL 144
+ GGYA V V V+P+P + ++ + + + + +
Sbjct: 126 EDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLV 184
Query: 145 V 145
Sbjct: 185 G 185
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.7 bits (195), Expect = 7e-19
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
K AA T + + ++ + GES LVHG S G+G A Q+ + G+++ TAG
Sbjct: 2 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61
Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
+EE + GA N++ +++ ++K+ G KG+D+I++ + ++L L+ G
Sbjct: 62 TEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGG 121
Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
R+ ++G++G E+N AK ++ G+
Sbjct: 122 RVIVVGSRGTI--EINPRDTMAKESSIIGV 149
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 79.3 bits (194), Expect = 9e-19
Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 34/175 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ Q P L+++EVE P I EVL++++A + D G +P
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCA----------------------------LLGGG 92
PG E G + VG V+ KVGD+V G
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
GYAE A V+ +P + + ++ M G L
Sbjct: 119 GYAEYCRAAADYVVKIPDNTII-EVQPLEKINEVFDR---MLKGQINGRVVLTLE 169
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 78.8 bits (193), Expect = 2e-18
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 -------PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGV 112
G E +G I VG V + GD V G G + + P +
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 113 SLKDAAAFPE-VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
+ A+ E V + ++ + P + + + ++ K G +V +
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQVLI 176
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 77.9 bits (190), Expect = 3e-18
Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 13/171 (7%)
Query: 1 MKAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---- 53
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63
Query: 54 ----PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVP 109
P + + + +
Sbjct: 64 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 110 SGVSLKDAAAFPEVACTVWSTVF-MTSHLSPGESFLVHG-GSSGIGTFAIQ 158
+ A T ++ + P G +S G I
Sbjct: 124 LPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 76.8 bits (188), Expect = 8e-18
Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 5/153 (3%)
Query: 113 SLKDAAAFPEVACTVWSTVFM---TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
+LK+A A T ++ LV G + G+G+ A+ M +G V
Sbjct: 2 TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 61
Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
+ G + + LGA + + D +A + +D +G L +
Sbjct: 62 STGKAAEHDYLRVLGAKEVLARE--DVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 119
Query: 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + + G GGA+ + + +++ GI
Sbjct: 120 YGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI 152
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.9 bits (188), Expect = 1e-17
Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 36/182 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
++V+ P L+L+ P+ +EVL+++ + + +D +
Sbjct: 8 NLSLVVH---GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64
Query: 61 --PGLECSGTILSVGKNVSRWKVGDQVCA------------------------LLGGG-- 92
G E SGT+ VG +V K GD+V
Sbjct: 65 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 93 --GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
A +P V FP F T G ++ S
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP---LEKALEAFETFKKGLGLKIMLKCDPS 181
Query: 151 GI 152
Sbjct: 182 DQ 183
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 76.2 bits (186), Expect = 1e-17
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 3/153 (1%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
L+ T + + + ++ G + V G + + R+ +
Sbjct: 3 LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 62
Query: 174 EEKLAVCKDLGADVCINYK-TEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
++K A K++GA C+N + + + V E GVD + +G S +
Sbjct: 63 KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA 122
Query: 233 R--LFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
I+G ++ L T +G +
Sbjct: 123 YGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAI 155
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 75.0 bits (183), Expect = 4e-17
Identities = 29/153 (18%), Positives = 45/153 (29%), Gaps = 3/153 (1%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
L T + T+ L PG V G + R+ +
Sbjct: 3 LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN 62
Query: 174 EEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
++K A K+ GA CIN + + V E GVD +C+G R G
Sbjct: 63 KDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 122
Query: 233 --RLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
++G + T +G
Sbjct: 123 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTA 155
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 75.3 bits (184), Expect = 5e-17
Identities = 38/207 (18%), Positives = 58/207 (28%), Gaps = 65/207 (31%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA + + GSP L ++E+E K EV I+V AT + D
Sbjct: 9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLG 66
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGGGGY----- 94
EC+G + SVG V+ +K GD+V C L Y
Sbjct: 67 H--ECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124
Query: 95 --------------------------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
++ V + V L ++
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESIN 184
Query: 129 STVFMTSHLSPGESFLVHGGSSGIGTF 155
+ + G+S I TF
Sbjct: 185 DAI---DLMKEGKSIRT------ILTF 202
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 74.2 bits (181), Expect = 5e-17
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 2/126 (1%)
Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196
S LV G + G+G A+ M +G V + G+ E K LGA I+ + D
Sbjct: 21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISRE--DV 78
Query: 197 VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 256
+ + +D +G L + G + + G GG + + +
Sbjct: 79 YDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRG 138
Query: 257 LTVQGI 262
+++ GI
Sbjct: 139 VSLLGI 144
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 74.3 bits (181), Expect = 7e-17
Identities = 31/178 (17%), Positives = 53/178 (29%), Gaps = 35/178 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP- 59
+ A++ L+L++ P+ K+DEVL+++ + +D +
Sbjct: 3 LSAVLY----KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 58
Query: 60 -YPGLECSGTILSVGKNVSRWKVGDQVCALLGGG-------------------------- 92
G E SGT++ VGKNV K GD+V G
Sbjct: 59 MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 118
Query: 93 --GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148
A A +P ++K F + + V
Sbjct: 119 DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV-DAFEAARKKADNTIKVMIS 175
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 73.8 bits (180), Expect = 9e-17
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF 168
S L + A + T + V + L PG + G + V
Sbjct: 2 SREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVI 61
Query: 169 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN-LGS 227
EEKL + + LGAD ++ + D V +V E T G+GV+V +D +G+
Sbjct: 62 ALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL 120
Query: 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
L GRL I+G G + + + ++ +G
Sbjct: 121 LGRMGRLIIVGYGG--ELRFPTIRVISSEVSFEGS 153
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 72.2 bits (176), Expect = 6e-16
Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 61/203 (30%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V+ + P ++EVE K EV IK+ AT + R+D G+ P
Sbjct: 9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG 66
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCA--------------------------------- 87
E +G + S+G+ V+ + GD+V
Sbjct: 67 H--EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 88 ---------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
LG +++ V V + + +L + + F
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHV-LPFEKINEGF 183
Query: 133 MTSHLSPGESFLVHGGSSGIGTF 155
L GES I TF
Sbjct: 184 --DLLRSGESIRT------ILTF 198
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 70.9 bits (172), Expect = 1e-15
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 11/164 (6%)
Query: 106 LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165
LP+ + P T + + + GE+ LV + +G+ Q+ K +G
Sbjct: 1 LPLSLALG---TIGMP--GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC 55
Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 225
+V AGS+EK+A K +G D NYKT + + ++ G D D +G + L
Sbjct: 56 KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVL 115
Query: 226 GSLNIDGRLFIIGT------QGGAKTELNITSLFAKRLTVQGIV 263
+ G++ I G + S+ K+L ++G +
Sbjct: 116 SQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFI 159
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 70.4 bits (171), Expect = 2e-15
Identities = 25/152 (16%), Positives = 46/152 (30%), Gaps = 2/152 (1%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
L T + T+ + PG + V G + + R+ +
Sbjct: 3 LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 62
Query: 174 EEKLAVCKDLGADVCINYKTEDFV-ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
+K K GA +N ++V + GVD L+C+G RN + G
Sbjct: 63 PDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG 122
Query: 233 -RLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
+ ++ T +G +
Sbjct: 123 WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSM 154
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 70.3 bits (171), Expect = 2e-15
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 7/153 (4%)
Query: 113 SLKDAAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
+ A T V +V G S G+G+ A+ + G +V
Sbjct: 2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61
Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
+G E K LGA + ++++ +D + G + L +N
Sbjct: 62 VSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTV----GDKVLAKVLAQMN 117
Query: 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + G GG + + + +QG+
Sbjct: 118 YGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV 150
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 70.7 bits (172), Expect = 2e-15
Identities = 32/208 (15%), Positives = 60/208 (28%), Gaps = 53/208 (25%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-------DEVLIKVEATALNRADTLQRKGSYPP 53
+ +V G +++Q+++ P+++D V++KV +T + +D +G
Sbjct: 2 NRGVVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 58
Query: 54 PKGASPYPGL--------------------------------ECSGTILSVGKNVSRWKV 81
G + C V V+ +
Sbjct: 59 QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARA 118
Query: 82 GDQVCALLGGG---GYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH 136
G + G G AE V VP +L +P + EV ++ +
Sbjct: 119 GGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAP 177
Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQG 164
GE + F I K
Sbjct: 178 RGYGE-----FDAGVPKKFVIDPHKTFS 200
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (169), Expect = 3e-15
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 4/153 (2%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
V+ ++ A ++ + + ++ G LV G + +V VT
Sbjct: 1 VTFEEGALIEPLSVGIHA--CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTD 58
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVA--RVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
S +L+ K++GAD+ + E R E G +V ++C GA +
Sbjct: 59 LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYAT 118
Query: 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G ++ G T + + + + ++G+
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGV 151
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 67.8 bits (164), Expect = 1e-14
Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 34/174 (19%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKG--SYPPPKGAS 58
KA + + P L++++V+ P+++ +V++++ + D +G
Sbjct: 1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLP 58
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGGGGY--- 94
G E G I V + V + GD V C L G
Sbjct: 59 YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 118
Query: 95 ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
AE + V+ +P V ++ + V + G + L+
Sbjct: 119 GGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL--EKGEVLGRAVLI 170
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 68.0 bits (165), Expect = 2e-14
Identities = 42/195 (21%), Positives = 64/195 (32%), Gaps = 27/195 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+ A V G+ +LQ ++ Q + DEVL+KV AT + D + R YP P A
Sbjct: 4 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLG 61
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
E SG I ++G NV+ +VGD V G G + G + A +
Sbjct: 62 H--EGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSE 119
Query: 121 PEVACTVWSTVFMTSHLS-----------------------PGESFLVHGGSSGIGTFAI 157
A + H P + + I AI
Sbjct: 120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179
Query: 158 QMGKCQGVRVFVTAG 172
K ++ +
Sbjct: 180 DSRKGITLKPIIKIA 194
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 66.9 bits (162), Expect = 3e-14
Identities = 34/152 (22%), Positives = 49/152 (32%), Gaps = 8/152 (5%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
L A T +S + PG+ V G I++ G V
Sbjct: 4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLG-HMGIKLAHAMGAHVVAFT 61
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC-MGASYFQRNLGSLNI 230
SE K K LGAD +N + D +A K D IL+ L
Sbjct: 62 TSEAKREAAKALGADEVVNSRNADEMAAHL-----KSFDFILNTVAAPHNLDDFTTLLKR 116
Query: 231 DGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
DG + ++G + +L KR + G
Sbjct: 117 DGTMTLVGAPATPHKSPEVFNLIMKRRAIAGS 148
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 66.4 bits (161), Expect = 7e-14
Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 31/177 (17%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAG 172
++D ++ T + + + PG + V G+ +G A + G V V
Sbjct: 1 IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDL 58
Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--------------- 217
+ +LA K G ++ ++ G VD +D +G
Sbjct: 59 NPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 118
Query: 218 -ASYFQRNLGSLNIDGRLFIIGTQGGAKT------------ELNITSLFAKRLTVQG 261
A+ + + G++ I G + +AK +
Sbjct: 119 PATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHT 175
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 66.0 bits (160), Expect = 7e-14
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-E 174
++ T + T+ ++PG + V G G+G AI K G + G+ +
Sbjct: 4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVGTHK 62
Query: 175 EKLAVCKDLGADVCINYKTEDF-VARVKEETGGKGVDVILDCMGASYFQRN--LGSLNID 231
+K +LGA C+N K D + V E GVD ++C G N +
Sbjct: 63 DKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGS 122
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
G ++G + L +++G V
Sbjct: 123 GVTVVLGLASPNERLPLDPLLLLTGRSLKGSV 154
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 65.0 bits (157), Expect = 2e-13
Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 40/165 (24%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
+KA+ P L+ ++ + ++V I++ + +D Q + +
Sbjct: 1 IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV-------------------------CALLGGG--- 92
E G +++VG V ++ GD V
Sbjct: 59 GH-EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTP 117
Query: 93 --------GYAEKVAVPAGQVLPVP-SGVSLKDAAAFPEVACTVW 128
GY++++ V VL + + + + A E +
Sbjct: 118 DEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERML 162
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 64.7 bits (156), Expect = 2e-13
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 7/151 (4%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
+S ++AAAFP T + + + PGE LV + +GT A+Q+ + G+RV A
Sbjct: 1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 59
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
EKLA+ LGA+ Y G ++ + + +LG L
Sbjct: 60 SRPEKLALPLALGAEEAATYAEVPE------RAKAWGGLDLVLEVRGKEVEESLGLLAHG 113
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
GRL IG G + L + L V G
Sbjct: 114 GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGF 144
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 64.5 bits (156), Expect = 2e-13
Identities = 22/188 (11%), Positives = 47/188 (25%), Gaps = 52/188 (27%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
A+V+ + P L +E E I +L+++ + + +D +G P
Sbjct: 5 AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC------------------------------ALLG 90
E +G ++ V + G
Sbjct: 63 GH-EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 121
Query: 91 -----------GGGYAEKVAV-PAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
G Y+ + + P VL V ++ E +
Sbjct: 122 INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKIT--HRLPLKEANKAL-----ELMESR 174
Query: 139 PGESFLVH 146
+++
Sbjct: 175 EALKVILY 182
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 63.0 bits (152), Expect = 9e-13
Identities = 24/155 (15%), Positives = 41/155 (26%), Gaps = 6/155 (3%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAG 172
L A T + G++ ++ G G G+ I + +
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 173 SEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN 229
+ E+ + + T G+G D IL+ G L
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 230 IDGRLFIIGTQGGAKT-ELNI-TSLFAKRLTVQGI 262
G + G + L K T +GI
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGI 157
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 60.4 bits (146), Expect = 9e-13
Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 113 SLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
+ A T V +V G S G+G+ A+ + G +V
Sbjct: 2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61
Query: 170 TAGSEEKLAVCKDLGA 185
+G E K LGA
Sbjct: 62 VSGRESTHEYLKSLGA 77
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 62.2 bits (150), Expect = 2e-12
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
KA V +P P L L+ + K EV IK+ A+ + +D+ K P
Sbjct: 9 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF--PVI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC 86
G E G + S+G V+ K GD+V
Sbjct: 65 LGHEAVGVVESIGAGVTCVKPGDKVI 90
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 61.1 bits (147), Expect = 3e-12
Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 7/155 (4%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF-VT 170
+ L++A ++ T + + + G S +V G +G I K +G
Sbjct: 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRIIGV 58
Query: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLN 229
+ K GA +NYK +V + T GKGVD ++ G S + + +
Sbjct: 59 GSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVK 118
Query: 230 IDGRLFIIGTQGGAKT---ELNITSLFAKRLTVQG 261
G + I G T++G
Sbjct: 119 PGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 153
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 60.0 bits (144), Expect = 1e-11
Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 9/156 (5%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
VSL++ A ++ V + + + G + LV G + IG ++ K G V TA
Sbjct: 1 VSLEEGALLEPLSVGVHA--CRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTA 57
Query: 172 GSEEKLAVCKDLGADVCINYKTED----FVARVKEETGGKGVDVILDCMGASYFQRNLG- 226
S +L V K+ GADV + + G +V +DC G
Sbjct: 58 RSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGIN 117
Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G L ++G + + + A+ + ++ +
Sbjct: 118 ITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIKSV 152
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 59.6 bits (143), Expect = 1e-11
Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 48/192 (25%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MK + L E E P + +++ A + +D + +
Sbjct: 1 MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDR-KNMI 56
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLG------------------------------ 90
G E G ++ VG V +K GD+V
Sbjct: 57 LGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 91 GGGYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG- 147
G + E V + +P V L + + E+ L+
Sbjct: 117 DGVFGEYFHVNDADMNLAILPKDVDLSKLVT---HVYHGFDHI--------EEALLLMKD 165
Query: 148 GSSGIGTFAIQM 159
+ + +
Sbjct: 166 KPKDLIKAVVIL 177
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 59.0 bits (141), Expect = 2e-11
Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 4/152 (2%)
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGVRVFVTA 171
+ +AA T + V + L P ++ LV G G G +
Sbjct: 2 NAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEE-TGGKGVDVILDCMGASYFQRNLGSLNI 230
EE + K GAD IN +D +A ++ VI +L
Sbjct: 61 VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120
Query: 231 DGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G+ +++ GA + + + G
Sbjct: 121 QGK-YVMVGLFGADLHYHAPLITLSEIQFVGS 151
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.1 bits (139), Expect = 6e-11
Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 14/159 (8%)
Query: 118 AAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT--AGS 173
A T V H+S G ++ +V G + G+ A Q+G G V
Sbjct: 7 GAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ 66
Query: 174 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 233
E+ L + +LG D +NYKT + +++E GVDV D +G + +N +
Sbjct: 67 EKCLFLTSELGFDAAVNYKTGNVAEQLREAC-PGGVDVYFDNVGGDISNTVISQMNENSH 125
Query: 234 LFIIGTQGGAKTEL---------NITSLFAKRLTVQGIV 263
+ + G ++ + +T +
Sbjct: 126 IILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFT 164
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 55.8 bits (133), Expect = 3e-10
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
V + A TV+ + T + PG+ + G G+G A+Q + G+ V
Sbjct: 1 VEFAEIAPILCAGVTVYKGLKQT-NARPGQWVAIS-GIGGLGHVAVQYARAMGLHVAAID 58
Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
+ KL + + LGA + +N + ED V ++ + GG V++ + S F + +G
Sbjct: 59 IDDAKLELARKLGASLTVNARQEDPVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRG 117
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
G + ++G G I + K L + G +
Sbjct: 118 GTIALVGLPPG-DFPTPIFDVVLKGLHIAGSI 148
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 55.5 bits (132), Expect = 3e-10
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 4/151 (2%)
Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
S ++AA T + + +T PGE ++G +Q K G+ V
Sbjct: 2 SFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGIGGLGHVA-VQYAKAMGLNVVAVDI 59
Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
+EKL + K+LGAD+ +N ED +KE+ GG V+ + FQ S+ G
Sbjct: 60 GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV-TAVSKPAFQSAYNSIRRGG 118
Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
++G + + I + + G +
Sbjct: 119 ACVLVGLPPE-EMPIPIFDTVLNGIKIIGSI 148
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 54.9 bits (131), Expect = 6e-10
Identities = 29/154 (18%), Positives = 50/154 (32%), Gaps = 5/154 (3%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAG 172
+ T + T + PG + +V G G+G I K G +
Sbjct: 4 PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVF-GLGGVGLSVIMGCKSAGASRIIGIDL 62
Query: 173 SEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
+++K +GA CI+ K ++ V E G V + +G + +
Sbjct: 63 NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122
Query: 232 GR--LFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
++G AK L T +G V
Sbjct: 123 NYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCV 156
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 54.9 bits (131), Expect = 6e-10
Identities = 30/151 (19%), Positives = 47/151 (31%), Gaps = 1/151 (0%)
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
L+ + + T+ ++PG + V G + I R+ +
Sbjct: 3 LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 62
Query: 174 EEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
EK K LGA C+N + D V V E GVD LDC G + + + G
Sbjct: 63 GEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLG 122
Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
T ++ G
Sbjct: 123 WGSCTVVGAKVDEMTIPTVDVILGRSINGTF 153
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 42.7 bits (100), Expect = 8e-06
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTIL 70
+ +L+ VE P +K+ EVL++ +++ + + K + G + + +
Sbjct: 18 TQSDFELKTVELPPLKNGEVLLEALFLSVD----PYMRIASKRLKEGAVMMGQQVARVVE 73
Query: 71 SVGKNVSRWKVGDQVCALLGGGGYA 95
S S + G V A G +
Sbjct: 74 S---KNSAFPAGSIVLAQSGWTTHF 95
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.8 bits (97), Expect = 3e-05
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 10/98 (10%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG--------ADVCINYKT 193
+V G + GIG Q+ K + + TA EK K + V +
Sbjct: 7 VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSL 66
Query: 194 EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
+ FV++V E G G+ ++++ G N
Sbjct: 67 DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 38.9 bits (90), Expect = 3e-04
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 9/94 (9%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-----DVCINYKTEDFV 197
+V G A+++ + G V S ++ + + + +
Sbjct: 4 IVTNVKHFGGMGSALRLSE-AGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELI 62
Query: 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
V G VDV++ + + + ++
Sbjct: 63 EAVTSAYG--QVDVLVSNDIFAPEFQPIDKYAVE 94
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 38.3 bits (89), Expect = 5e-04
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 140 GESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-----DVCINYKT 193
G+ LV GG+ GIG A + +G V + E V + +G D+ +
Sbjct: 5 GKGVLVTGGARGIGRAIAQAFAR-EGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERER 63
Query: 194 EDFVARVKEETGGKGVDVILDCMGASYF 221
FV G VDV+++ +
Sbjct: 64 VRFVEEAAYALG--RVDVLVNNAAIAAP 89
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.7 bits (87), Expect = 7e-04
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 133 MTSHLSPGESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGA--DVC 188
M L+ G LV G GIG + G RV + ++ L ++ ++ VC
Sbjct: 1 MELFLA-GRRVLVTGAGKGIGRGTVQALHA-TGARVVAVSRTQADLDSLVRECPGIEPVC 58
Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
++ + R G VD++++ + Q
Sbjct: 59 VDLGDWEATERALGSVG--PVDLLVNNAAVALLQ 90
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 37.3 bits (86), Expect = 0.001
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 14/90 (15%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----------LGADVCINY 191
LV GG+ GIG + G + A +E +L C D +
Sbjct: 12 LVTGGTKGIGHAIVEEFAG-FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 70
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYF 221
+ E + V GGK +D++++ +GA
Sbjct: 71 EREKLMQTVSSMFGGK-LDILINNLGAIRS 99
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.4 bits (83), Expect = 0.002
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVK 201
+V+GG +G K G V S A + + + + + +
Sbjct: 6 IVYGGKGALGSAILEFFKK-NGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTA 64
Query: 202 EETGGKGVDVILDCM 216
G VD +
Sbjct: 65 SSLQGSQVDGVFCVA 79
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.1 bits (83), Expect = 0.002
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGA--DVCINYKTEDFVAR 199
LV G GIG + G +V + L ++ K+ VC++ D +
Sbjct: 9 LVTGAGKGIGRDTVKALHA-SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK 67
Query: 200 VKEETGGKGVDVILDCMGASYFQ 222
G VD++++ Q
Sbjct: 68 ALGGIG--PVDLLVNNAALVIMQ 88
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 36.2 bits (83), Expect = 0.003
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLG-------ADVCINYKTE 194
L+ GG+SG+G + +G +V V S E+LA + D G DV +
Sbjct: 9 LITGGASGLGRALVDRFVA-EGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQK 67
Query: 195 DFVARVKEETGGKGVDV 211
+R G +
Sbjct: 68 QAASRCVARFGKIDTLI 84
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 35.5 bits (81), Expect = 0.004
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLG----------ADVCINY 191
LV G +SGIG A ++GK +G+RVFV A EE L K+L DV
Sbjct: 6 LVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 64
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
+ E VA V E G VDV+++ G
Sbjct: 65 EIEALVAAVVERYG--PVDVLVNNAGRPGGG 93
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 35.5 bits (81), Expect = 0.004
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 202
LV GG+ GIG A ++ G +V VT + DV + + V+E
Sbjct: 11 LVTGGNRGIGLAIAQRLAA-DGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEE 69
Query: 203 E 203
Sbjct: 70 H 70
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 274 | |||
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.97 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.97 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.97 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.97 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.97 | |
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.97 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.96 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.96 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.96 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.96 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.96 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.95 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.95 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.95 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.95 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.95 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.95 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.94 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.94 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.94 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.94 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.94 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.94 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.93 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.93 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.93 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.93 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.92 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.92 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.91 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.91 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.91 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.91 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.9 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.89 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.89 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.89 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.89 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.89 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.89 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.88 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.88 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.88 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.87 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.87 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.87 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.87 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.87 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.87 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.84 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.75 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.71 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.57 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.02 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.96 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.92 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.92 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.88 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.82 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.79 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.79 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.78 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.77 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.76 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.76 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.75 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.74 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.73 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.73 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.73 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.71 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.69 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.68 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.67 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.65 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.64 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.63 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.63 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.63 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.62 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.61 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.6 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.6 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.6 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.59 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.58 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.57 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.57 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.56 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.56 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.56 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.55 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.54 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.54 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.53 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.53 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.53 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.51 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.51 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.5 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.49 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.49 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.48 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.47 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.43 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.4 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.34 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.32 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.23 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.15 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.14 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.12 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.07 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.07 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.05 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.97 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.89 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.87 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.84 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.77 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.77 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.76 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.73 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.72 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.6 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.59 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.58 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.54 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 97.46 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.45 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.45 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.44 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.39 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.35 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.34 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.34 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 97.31 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.23 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 97.22 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.22 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 97.19 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 97.18 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 97.15 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.15 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 97.14 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.13 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 97.13 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.11 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 97.07 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 97.07 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 97.06 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.05 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.0 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.98 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.94 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 96.92 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 96.91 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.87 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.84 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.83 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.81 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 96.8 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.8 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.74 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 96.74 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.69 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.68 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 96.67 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.66 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 96.65 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 96.64 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 96.64 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 96.6 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 96.56 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.51 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 96.51 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 96.5 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.49 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.45 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 96.45 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.44 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 96.41 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.38 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.36 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.35 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.34 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 96.33 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 96.29 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.18 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.15 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 96.13 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.09 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 96.06 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.03 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.98 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 95.96 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.93 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.92 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.92 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.9 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.82 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 95.78 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.77 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.75 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 95.75 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.7 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.69 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 95.68 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 95.64 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 95.62 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.62 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.6 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.56 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.48 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 95.4 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 95.38 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.17 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 95.1 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 95.09 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.08 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.03 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 94.96 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.93 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.92 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.91 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 94.91 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.89 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 94.86 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 94.86 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.81 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.76 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.74 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 94.69 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.67 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.65 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 94.57 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 94.54 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 94.53 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.5 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 94.47 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 94.38 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.36 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.34 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 94.27 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.22 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 94.12 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.07 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.0 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 93.93 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 93.89 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 93.79 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 93.78 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.76 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.72 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 93.67 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 93.66 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.58 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 93.54 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.43 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 93.35 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 93.34 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.33 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 93.26 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.1 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 92.97 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 92.91 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 92.9 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 92.78 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 92.64 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 92.45 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 92.41 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.33 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 92.29 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 92.2 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.15 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 91.99 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 91.96 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 91.9 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.8 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 91.77 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 91.71 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 91.67 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 91.66 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 91.59 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 91.52 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 91.52 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 91.48 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 91.3 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 91.21 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.15 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 90.96 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 90.93 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.84 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 90.84 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 90.82 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 90.73 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 90.69 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 90.57 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 90.48 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 90.22 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 90.12 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 90.1 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 90.09 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 90.07 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 89.92 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 89.9 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 89.86 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 89.8 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 89.75 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.57 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 89.54 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 89.42 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 89.28 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 89.25 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 89.22 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 89.08 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 89.05 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 88.92 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 88.87 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 88.86 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 88.66 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 88.65 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.54 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 88.36 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 88.31 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 88.3 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 88.09 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.03 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.0 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 87.95 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 87.94 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 87.72 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 87.63 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 87.6 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 87.6 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 87.57 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 87.55 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 87.49 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 87.46 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 87.32 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.18 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 87.04 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 87.01 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 86.99 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 86.98 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 86.91 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 86.74 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.6 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 86.57 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 86.33 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.29 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.23 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 86.22 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 85.89 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 85.88 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 85.79 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 85.74 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 85.73 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 85.47 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 85.38 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 85.33 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 85.14 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 85.07 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 84.95 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 84.88 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 84.87 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 84.81 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 84.63 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 84.58 | |
| d1peya_ | 119 | Sporulation response regulator Spo0F {Bacillus sub | 84.5 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 84.29 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 84.19 | |
| d2ax3a2 | 211 | Hypothetical protein TM0922, N-terminal domain {Th | 84.07 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.67 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 83.61 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 83.35 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 83.22 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.0 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.79 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 82.7 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 82.67 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 82.6 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 82.28 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 82.15 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 82.0 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 81.98 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 81.86 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 81.83 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 81.7 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 81.58 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 81.46 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 81.36 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 81.35 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 81.35 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 81.25 | |
| d2a9pa1 | 117 | DNA-binding response regulator MicA, N-terminal do | 81.15 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 81.11 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 81.07 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 80.8 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 80.71 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 80.71 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 80.66 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 80.29 |
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-33 Score=207.20 Aligned_cols=146 Identities=30% Similarity=0.435 Sum_probs=135.8
Q ss_pred CEEEEEcCCCCCcceEEE-eecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~-~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||++++++|+++.++++ +.+.|+|++|||+|||.+++||++|.+.++|.++.....|.++|||++|+|+++|+++++|
T Consensus 3 MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 82 (150)
T d1yb5a1 3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 82 (150)
T ss_dssp EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred eeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeecc
Confidence 999999999999889985 6899999999999999999999999999999887766788999999999999999999999
Q ss_pred CCCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe
Q 024011 80 KVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146 (274)
Q Consensus 80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~ 146 (274)
++||||++.. .+|+|+||+.++.+.++++|+++++++|++++...+++++.+...+..+.|+++||.
T Consensus 83 ~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 83 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp CTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred ccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 9999998764 458999999999999999999999999999999999999998888889999999874
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.97 E-value=8.7e-32 Score=207.57 Aligned_cols=145 Identities=21% Similarity=0.213 Sum_probs=127.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|.|++++++++ +++++.+.|+|+++||+||++++|||++|++.+.+.... ....|+++|||++|+|+++|+++++
T Consensus 2 ~maAVl~g~~~---l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~ 78 (178)
T d1e3ja1 2 NLSAVLYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH 78 (178)
T ss_dssp CEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred ceEEEEEcCCc---EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCC
Confidence 45667776654 999999999999999999999999999999988764332 2356789999999999999999999
Q ss_pred CCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|++||||+... .+|+|+||+++|.+.++++|+++++++++.+.+++.|+|++
T Consensus 79 ~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a 158 (178)
T d1e3ja1 79 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA 158 (178)
T ss_dssp CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHH
T ss_pred CCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHH
Confidence 99999997532 35899999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEecCC
Q 024011 131 VFMTSHLSPGESFLVHGGS 149 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~ 149 (274)
+ +.+++++|++|+|+|+.
T Consensus 159 ~-~~~~~~~g~~VlVig~C 176 (178)
T d1e3ja1 159 F-EAARKKADNTIKVMISC 176 (178)
T ss_dssp H-HHHHHCCTTCSEEEEEC
T ss_pred H-HHhCCCCCCEEEEEccc
Confidence 8 56789999999999874
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=8.8e-31 Score=201.42 Aligned_cols=142 Identities=29% Similarity=0.367 Sum_probs=127.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.+.|.|++|||+|||.+++||++|++.++|.++.....|.++|||++|+|+++|++++.++
T Consensus 6 MkA~v~~~~g~p--l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~ 83 (175)
T d1llua1 6 MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVK 83 (175)
T ss_dssp EEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred cEEEEEEeCCCC--CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccccc
Confidence 899999999876 889999999999999999999999999999999998876667899999999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||+... .+|+|+||++++++.++++|++++++.++++..++.+++..+
T Consensus 84 ~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~- 162 (175)
T d1llua1 84 EGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM- 162 (175)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-
T ss_pred cCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-
Confidence 999997521 247899999999999999999999998888889999998877
Q ss_pred hhcCCCCCCEEEEe
Q 024011 133 MTSHLSPGESFLVH 146 (274)
Q Consensus 133 ~~~~~~~g~~vlI~ 146 (274)
+. ...+|++|||.
T Consensus 163 ~~-g~~~G~~VLVl 175 (175)
T d1llua1 163 RA-GQIEGRIVLEM 175 (175)
T ss_dssp HT-TCCSSEEEEEC
T ss_pred Hh-CCCCCCEEEeC
Confidence 33 34479999984
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=6.7e-31 Score=191.29 Aligned_cols=131 Identities=34% Similarity=0.544 Sum_probs=121.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++|++ +++++.+.|+|++|||+||++++|||++|++.++|.++.....|+++|||++|+|
T Consensus 1 MkA~~~~~~G~~--l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V----------- 67 (131)
T d1iz0a1 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV----------- 67 (131)
T ss_dssp CEEEEECSTTSC--EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------
T ss_pred CcEEEEccCCCC--CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------
Confidence 999999999876 8999999999999999999999999999999999988776678999999999998
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~ 146 (274)
+||+|+++..+|+|+||+.++.+.++++|+++++++|+++++++.|||+++.+.+ +.|+++|+.
T Consensus 68 vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 68 EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 3999999999999999999999999999999999999999999999999996655 569999863
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=5.3e-30 Score=196.37 Aligned_cols=142 Identities=30% Similarity=0.461 Sum_probs=122.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++++.|+|++|||+|||+++|||++|++.+++........|.++|||++|+|+++|++++.++
T Consensus 1 MkA~v~~~~g~p--l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~ 78 (171)
T d1rjwa1 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK 78 (171)
T ss_dssp CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CeEEEEecCCCC--cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence 999999998876 899999999999999999999999999999999887666667899999999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||+... .+|+|+||++++.+.++++|++++++.|+ +. +..++++.+.
T Consensus 79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~~ 156 (171)
T d1rjwa1 79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRML 156 (171)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHHH
T ss_pred eeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHHH
Confidence 999997421 25899999999999999999999986654 53 4556666653
Q ss_pred hhcCCCCCCEEEEecC
Q 024011 133 MTSHLSPGESFLVHGG 148 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga 148 (274)
.+.+ +|++|||+|.
T Consensus 157 -~~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 157 -KGQI-NGRVVLTLED 170 (171)
T ss_dssp -TTCC-SSEEEEECCC
T ss_pred -hcCC-CCCEEEEeCC
Confidence 3445 5999999984
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=7.4e-30 Score=190.41 Aligned_cols=142 Identities=27% Similarity=0.409 Sum_probs=125.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
+.+.++++|+++.|++++.+.|+|++|||+|||.+++||++|++.+.|.++. ...|.++|||++|+|+++|+++++|++
T Consensus 2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~v 80 (147)
T d1qora1 2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIKA 80 (147)
T ss_dssp EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceeeeeeecccccc
Confidence 5788999999999999999999999999999999999999999999998764 357889999999999999999999999
Q ss_pred CCEEEEE-ecCCeeeeEEeeeCCCeEECCCCCCHHhh--ccCcchHHHHHHHHHhhcCCCCCCEEEE
Q 024011 82 GDQVCAL-LGGGGYAEKVAVPAGQVLPVPSGVSLKDA--AAFPEVACTVWSTVFMTSHLSPGESFLV 145 (274)
Q Consensus 82 Gd~V~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a--a~l~~~~~~a~~~l~~~~~~~~g~~vlI 145 (274)
||||+.. ...|+|+||..++.+.++++|+.++++++ ++++....++++++.+ .++++|++|||
T Consensus 81 GdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 81 GDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp TCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred cceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence 9999743 35689999999999999999999988644 4556666777777744 57899999998
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.97 E-value=2.9e-30 Score=202.19 Aligned_cols=143 Identities=22% Similarity=0.244 Sum_probs=130.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++.+ +++++.+.|+|++|||+|||.++|||++|++.+.+..... .+|.++|||++|+|+++|+++..|+
T Consensus 9 ~kAav~~~~~~p--l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~-~~p~i~GhE~~G~v~~vG~~v~~~~ 85 (199)
T d1cdoa1 9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD-GFPVVLGHEGAGIVESVGPGVTEFQ 85 (199)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTT-SCSEECCCCEEEEEEEECTTCCSCC
T ss_pred EEEEEEecCCCC--cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccccc-ccccccccccceEEEEEcCCCceec
Confidence 579999998876 8999999999999999999999999999999999966543 5689999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||+... .+|+|+||++++.+.++++|+++
T Consensus 86 ~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~ 165 (199)
T d1cdoa1 86 PGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV 165 (199)
T ss_dssp TTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCC
Confidence 999997642 13899999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~ 146 (274)
++++++++.+++.|++.++......+.|++|||+
T Consensus 166 ~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp CCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999999999999999888888999999984
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=3.5e-30 Score=193.20 Aligned_cols=143 Identities=20% Similarity=0.315 Sum_probs=128.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++..+++++.+.|+|++|||||||.++|||++|.+.+.|.++.....|+++|||++|+|++ .++..|+
T Consensus 4 ~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~ 81 (152)
T d1xa0a1 4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFR 81 (152)
T ss_dssp EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCC
T ss_pred eEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCccc
Confidence 89999999998877889999999999999999999999999999999988776667899999999999998 5677899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEec
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~G 147 (274)
+||+|+... .+|+|+||+.+|.+.++++|+++| ++|++++++.+|++.++....+++ |++|||+|
T Consensus 82 ~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~ 152 (152)
T d1xa0a1 82 EGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA 152 (152)
T ss_dssp TTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred cCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence 999998764 368999999999999999999998 467888899999998887888876 99999975
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.96 E-value=6.9e-30 Score=195.22 Aligned_cols=140 Identities=20% Similarity=0.292 Sum_probs=125.2
Q ss_pred EEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++++++ +++++.+.|++ ++|||+||+.+++||++|++.+.|.++. ....|.++|||++|+|+++|+++++
T Consensus 1 kA~~~~~~g~p--l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~ 78 (171)
T d1h2ba1 1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG 78 (171)
T ss_dssp CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred CEEEEEeCCCC--CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCc
Confidence 79999999987 99999999986 6899999999999999999999887642 2356889999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+++||||+... .+|+|+||+.++.+.++++|++++++.++++.+++.|+++++
T Consensus 79 ~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al 158 (171)
T d1h2ba1 79 LEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158 (171)
T ss_dssp CCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH
T ss_pred CCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH
Confidence 99999998642 358999999999999999999999988888999999999998
Q ss_pred HhhcCCCCCCEEEE
Q 024011 132 FMTSHLSPGESFLV 145 (274)
Q Consensus 132 ~~~~~~~~g~~vlI 145 (274)
+...+ .|++|||
T Consensus 159 -~~~~~-~G~~VlI 170 (171)
T d1h2ba1 159 -EKGEV-LGRAVLI 170 (171)
T ss_dssp -HTTCC-SSEEEEE
T ss_pred -HhcCC-CCCEEEe
Confidence 45677 8999998
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.96 E-value=1.1e-29 Score=198.16 Aligned_cols=143 Identities=24% Similarity=0.255 Sum_probs=128.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|+|+++||||||+++|||++|++.++|.+... ..|+++|||++|+|+++|++++.++
T Consensus 7 ~kAav~~~~g~~--l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~-~~p~v~GhE~~G~V~~vG~~V~~~~ 83 (197)
T d2fzwa1 7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG-CFPVILGHLGAGIVESVGEGVTKLK 83 (197)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC-CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccc-cccccCCcceeeEEEeecCCceecC
Confidence 799999999887 9999999999999999999999999999999999976543 5789999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||+... .+|+|+||+++|+..++++|+++
T Consensus 84 ~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l 163 (197)
T d2fzwa1 84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLI 163 (197)
T ss_dssp TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCCC
Confidence 999997631 03799999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~ 146 (274)
++++++++.+++.+++.++..+..-+.+++|+|+
T Consensus 164 ~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 164 KVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp CSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred CHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 9999999999999999998666556788999874
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.3e-29 Score=196.64 Aligned_cols=145 Identities=19% Similarity=0.232 Sum_probs=125.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCC-CCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV-SRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~-~~~ 79 (274)
||++++..+++...+++.+.+.++++++||+||+.++|||++|++.+.|.++. ..+|+++|||++|+|+++|+++ +.+
T Consensus 7 ~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~-~~~P~i~GHE~~G~Vv~vG~~v~~~~ 85 (192)
T d1piwa1 7 FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLGPKSNSGL 85 (192)
T ss_dssp EEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred eEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCC-CCCCcCcccccccchhhccccccccc
Confidence 79999999998888998888878889999999999999999999999987664 3578999999999999999988 669
Q ss_pred CCCCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchH
Q 024011 80 KVGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA 124 (274)
Q Consensus 80 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~ 124 (274)
++||||... ..+|+|+||++++.+.++++|++++++.|+.+...+
T Consensus 86 k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~ 165 (192)
T d1piwa1 86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGV 165 (192)
T ss_dssp CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHH
T ss_pred CCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHH
Confidence 999999531 125899999999999999999999998876444346
Q ss_pred HHHHHHHHhhcCCCCCCEEEEec
Q 024011 125 CTVWSTVFMTSHLSPGESFLVHG 147 (274)
Q Consensus 125 ~~a~~~l~~~~~~~~g~~vlI~G 147 (274)
.++|+++ +.+++++|++|++..
T Consensus 166 ~ta~~~l-~~~~vk~g~~Vvv~~ 187 (192)
T d1piwa1 166 HEAFERM-EKGDVRYRFTLVGYD 187 (192)
T ss_dssp HHHHHHH-HHTCCSSEEEEECCH
T ss_pred HHHHHHH-HHhCCCCCCEEEEEC
Confidence 7899988 578999999999864
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.96 E-value=4.4e-29 Score=196.09 Aligned_cols=140 Identities=24% Similarity=0.283 Sum_probs=124.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ ++++++|.|+|+++||||||.++|||++|++.+.|.++. ..|.++|||++|+|+++|+++++++
T Consensus 9 ~KAaV~~~~g~p--l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~v~GHE~~G~V~~vG~~V~~~~ 84 (202)
T d1e3ia1 9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA--LFPVVLGHECAGIVESVGPGVTNFK 84 (202)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc--ccccccccccceEEeeecCCceecc
Confidence 799999999876 899999999999999999999999999999999997754 4689999999999999999999999
Q ss_pred CCCEEEEEe----------------------------------------------------cCCeeeeEEeeeCCCeEEC
Q 024011 81 VGDQVCALL----------------------------------------------------GGGGYAEKVAVPAGQVLPV 108 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------------------------------~~g~~~~~~~~~~~~~~~~ 108 (274)
+||||+... .+|+|+||+++++..++++
T Consensus 85 ~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~l 164 (202)
T d1e3ia1 85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV 164 (202)
T ss_dssp TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred CCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEEC
Confidence 999997632 0288999999999999999
Q ss_pred CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEec
Q 024011 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147 (274)
Q Consensus 109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~G 147 (274)
|++++++.++++.+++.+.+.++.. +++|++|.|..
T Consensus 165 P~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~ 200 (202)
T d1e3ia1 165 DDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL 200 (202)
T ss_dssp CTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence 9999999988888888888887743 46788887653
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.95 E-value=4.8e-28 Score=188.25 Aligned_cols=140 Identities=26% Similarity=0.325 Sum_probs=121.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|+|+++.+.+++ |++++++.|+|++|||+||+.++|||++|++.+.|.++. .+|.+||||++|+|+++|+++++|+
T Consensus 4 ~~Aav~~~~g~~--l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~i~GHE~~G~V~~vG~~v~~~~ 79 (194)
T d1f8fa1 4 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVTELQ 79 (194)
T ss_dssp EEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred eEEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc--cCCcccccceEEEeeecCccceeEc
Confidence 789999998876 999999999999999999999999999999999998764 5799999999999999999999999
Q ss_pred CCCEEEEEe-------------------------------------------------cCCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||||+... ..|+|+||.+++..+++++|++
T Consensus 80 vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~ 159 (194)
T d1f8fa1 80 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD 159 (194)
T ss_dssp TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred cCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence 999996521 0267899999999999999998
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEE
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT 170 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~ 170 (274)
++++++ +++.| .+++|++++|+++..|++.++.
T Consensus 160 i~~~~~-------------------------~~i~g-~g~~g~~aiq~a~~~g~~~iia 192 (194)
T d1f8fa1 160 FPFDQL-------------------------VKFYA-FDEINQAAIDSRKGITLKPIIK 192 (194)
T ss_dssp CCGGGG-------------------------EEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred CCcccE-------------------------EEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence 876554 34455 4999999999999999965543
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.3e-28 Score=190.64 Aligned_cols=139 Identities=21% Similarity=0.218 Sum_probs=118.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|+|++++++++ +++++++.|+|+++||+|||.++|||++|++.+++... .....|.++|||++|+|+++|+++.+
T Consensus 8 ~~a~V~~gp~~---l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 84 (185)
T d1pl8a1 8 NLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (185)
T ss_dssp CEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred CEEEEEeCCCe---EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence 68999998764 99999999999999999999999999999999875432 12356889999999999999999999
Q ss_pred CCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|++||||+... .+|+|+||++++.++++++|+++++++++.+ ++.+++++
T Consensus 85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~--pl~~a~~a 162 (185)
T d1pl8a1 85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF--PLEKALEA 162 (185)
T ss_dssp CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE--EGGGHHHH
T ss_pred ecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH--HHHHHHHH
Confidence 99999997531 3578999999999999999999999988754 34456666
Q ss_pred HHhhcCCCCCCEEEE
Q 024011 131 VFMTSHLSPGESFLV 145 (274)
Q Consensus 131 l~~~~~~~~g~~vlI 145 (274)
+ +..++++|++|+|
T Consensus 163 ~-~~~~~~~G~~VlI 176 (185)
T d1pl8a1 163 F-ETFKKGLGLKIML 176 (185)
T ss_dssp H-HHHHTTCCSEEEE
T ss_pred H-HHhCCCCCCEEEE
Confidence 6 4456789999998
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=2.8e-28 Score=180.87 Aligned_cols=129 Identities=19% Similarity=0.314 Sum_probs=115.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++++..+++++.+.|+|++|||+|||.++|||++|.+...|.++.....|+++|+|++|+|+++|. ..++
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~ 78 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH 78 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence 99999999999888999999999999999999999999999999999998877777899999999999999766 4789
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+||+|+... .+|+|+||+++|.+.++++|+++|+++||+++++..||+..+
T Consensus 79 ~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~ 135 (146)
T d1o89a1 79 AGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN 135 (146)
T ss_dssp TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred ceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999998754 369999999999999999999999999999998888886543
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.95 E-value=5.5e-28 Score=185.99 Aligned_cols=141 Identities=29% Similarity=0.353 Sum_probs=116.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC-------CCCCCCCCCCCceeEEEEEec
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-------PPKGASPYPGLECSGTILSVG 73 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~-------~~~~~p~~~G~e~~G~V~~vG 73 (274)
|||++++++|++ +++++.+.|+|++|||+||+.++|||++|++.++|.++ ....+|+++|||++|+|+++|
T Consensus 1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g 78 (177)
T d1jvba1 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78 (177)
T ss_dssp CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence 999999999876 89999999999999999999999999999999998653 223578999999999999999
Q ss_pred CCCCCCCCCCEEEEEe---------------------------cCCeeeeEEeeeCCC-eEECCCCCCHHhhccCcchHH
Q 024011 74 KNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQ-VLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 74 ~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+++++|++||||+... .+|+|+||++++... ++++|+..+.+.++.+..++.
T Consensus 79 ~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~ 158 (177)
T d1jvba1 79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEAN 158 (177)
T ss_dssp TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHH
T ss_pred cCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHH
Confidence 9999999999997532 248999999998765 556655544444444457888
Q ss_pred HHHHHHHhhcCCCCCCEEEE
Q 024011 126 TVWSTVFMTSHLSPGESFLV 145 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI 145 (274)
++++++ +..++ .|++|||
T Consensus 159 ~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 159 EAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp HHHHHH-HTTCC-CSEEEEE
T ss_pred HHHHHH-Hhhcc-cCCceEC
Confidence 999888 44555 5899987
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.1e-27 Score=182.33 Aligned_cols=152 Identities=28% Similarity=0.527 Sum_probs=141.8
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+|+++||+++++++|||+++.+..++++|++|||+|++|++|++++|+++.+|++|+++++++++++.++++|++.++|+
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 80 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH 80 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence 68999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++.++.+.+++.++++++|++||+.|...++.++++++++|+++.+|... ...+++..++.+++++.|++.+
T Consensus 81 ~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~--~~~~~~~~~~~k~~~i~g~~~~ 152 (174)
T d1yb5a2 81 REVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLF 152 (174)
T ss_dssp TSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS--CEEECTHHHHTTTCEEEECCGG
T ss_pred ccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC--CCCCCHHHHHHCCCEEEEEEec
Confidence 99999999999999999999999999888999999999999999998654 3577888899999999998754
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=6e-28 Score=185.64 Aligned_cols=137 Identities=17% Similarity=0.190 Sum_probs=117.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC---
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS--- 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~--- 77 (274)
|||+++++++++ +++++++.|+|++|||||||.++|||++|++.++|.++.. .+|+++|||++|+|+++|+++.
T Consensus 5 ~kA~v~~~~~~p--l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~-~~P~vlGHE~~G~V~~vG~~v~~~~ 81 (184)
T d1vj0a1 5 AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV-PLPIILGHEGAGRVVEVNGEKRDLN 81 (184)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC-CSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred EEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc-ccccccceeeeeeeeEEeccccccc
Confidence 799999998876 9999999999999999999999999999999999987643 5799999999999999999885
Q ss_pred --CCCCCCEEEEEe------------------------------------cCCeeeeEEeee-CCCeEECCCCCCHHhhc
Q 024011 78 --RWKVGDQVCALL------------------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAA 118 (274)
Q Consensus 78 --~~~~Gd~V~~~~------------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa 118 (274)
.+++||+|+... .+|+|+||+.++ ...++++|+++++++
T Consensus 82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~-- 159 (184)
T d1vj0a1 82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL-- 159 (184)
T ss_dssp SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE--
T ss_pred cccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH--
Confidence 468999997521 168999999996 578999999998653
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEec
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHG 147 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~G 147 (274)
++.+|++++ +.+.+++|++|+|+-
T Consensus 160 ----pl~~A~~a~-~~~~~~~G~~VlI~~ 183 (184)
T d1vj0a1 160 ----PLKEANKAL-ELMESREALKVILYP 183 (184)
T ss_dssp ----EGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred ----HHHHHHHHH-HHhCCCcCCEEEEee
Confidence 345677777 557899999999973
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=1.3e-29 Score=191.99 Aligned_cols=148 Identities=22% Similarity=0.306 Sum_probs=131.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+.++...+++++++.|++++|||||||+++|||++|++.+.|.++.....|.++|+|++|+|++ +.+++++
T Consensus 4 ~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~~ 81 (162)
T d1tt7a1 4 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFA 81 (162)
T ss_dssp EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTCC
T ss_pred EEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccccc
Confidence 89999999999888999999999999999999999999999999999998876667788999999999998 5677899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~ 151 (274)
+||+|+... .+|+|+||+++|++.++++|+++|+++|+.+++..+|+|.++.. .....+++|||+|++|+
T Consensus 82 ~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~ 157 (162)
T d1tt7a1 82 EGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGR 157 (162)
T ss_dssp TTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSE
T ss_pred cceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcce
Confidence 999998764 36899999999999999999999999999999999999876532 33455678899888764
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=1.2e-26 Score=177.03 Aligned_cols=151 Identities=19% Similarity=0.287 Sum_probs=132.0
Q ss_pred CCHHhhccCcchHHHHHHHHH---hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE
Q 024011 112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 188 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~ 188 (274)
+|++|||+++++++|||++++ +..+.++|++|||+|++|++|.+++|+++..|++|+++++++++.+.++++|++++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v 80 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV 80 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence 689999999999999997654 45778899999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|++.. + ++....+.++++|+|||+.|+..+...+++|+++|+++.+|...+....++...++.|++++.|+..
T Consensus 81 i~~~~~-~-~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~ 154 (176)
T d1xa0a2 81 LAREDV-M-AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDS 154 (176)
T ss_dssp EECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCS
T ss_pred eecchh-H-HHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeC
Confidence 987643 2 3444566777899999999999999999999999999999999888889999999999999999743
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.94 E-value=8.9e-30 Score=198.96 Aligned_cols=154 Identities=21% Similarity=0.300 Sum_probs=125.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-------CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEec
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-------KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG 73 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-------~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 73 (274)
+||++++++++ ++++++|.|++ ++|||+||+.+++||++|++.++|.++. .+|+++|||++|+|+++|
T Consensus 2 ~kA~v~~~~~~---le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~--~~P~v~GHE~~G~Vv~vG 76 (201)
T d1kola1 2 NRGVVYLGSGK---VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIEKG 76 (201)
T ss_dssp EEEEEEEETTE---EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEEEC
T ss_pred cEEEEEeCCCc---eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc--ccceeccceeeeeeeccc
Confidence 69999999874 99999998864 5699999999999999999999998764 579999999999999999
Q ss_pred CCCCCCCCCCEEEEEe-------------------------------------cCCeeeeEEeeeCC--CeEECCCCCCH
Q 024011 74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL 114 (274)
Q Consensus 74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (274)
++++.|++||||+... .+|+|+||+++|.. +++++|++.++
T Consensus 77 ~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~ 156 (201)
T d1kola1 77 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA 156 (201)
T ss_dssp TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred cccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCCh
Confidence 9999999999996321 24899999999863 69999998777
Q ss_pred HhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 115 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
.+++++.+++.++++++.. .+.+.+ ++|+ |++|++++|.+|.+|+
T Consensus 157 ~~~~~~~~~~~~~~~a~~~-~~~~~g----~~g~-G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 157 MEKINIAEVVGVQVISLDD-APRGYG----EFDA-GVPKKFVIDPHKTFSA 201 (201)
T ss_dssp HHTCCHHHHHTEEEECGGG-HHHHHH----HHHH-TCSCEEEECTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCCCe----EEee-CHHHHHHHHHHHHcCC
Confidence 7777676776666666532 233333 3475 8899999998888775
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.94 E-value=8.9e-27 Score=182.17 Aligned_cols=139 Identities=25% Similarity=0.303 Sum_probs=116.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++++ +++++++.|+|+++||||||.++|||++|++.+.|.++. .+|.++|||++|+|+++|++++.++
T Consensus 9 ~KAavl~~~~~~--l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~--~~P~i~GHE~~G~Vv~vG~~v~~~~ 84 (198)
T d2jhfa1 9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGVTTVR 84 (198)
T ss_dssp EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECTTCCSCC
T ss_pred EEEEEEecCCCC--CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc--ccceecccceeEEEEecCccccCcC
Confidence 799999988876 999999999999999999999999999999999998764 4689999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||+... ..|+|+||+++|...++++|+.+
T Consensus 85 vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~ 164 (198)
T d2jhfa1 85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF 164 (198)
T ss_dssp TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCC
Confidence 999997521 12789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~ 146 (274)
+++.++....++.....+. ..+++|++|+|.
T Consensus 165 ~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi 195 (198)
T d2jhfa1 165 ALDPLITHVLPFEKINEGF---DLLRSGESIRTI 195 (198)
T ss_dssp CCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred CHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence 8877765555544333322 225678888775
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=3.4e-26 Score=175.37 Aligned_cols=131 Identities=18% Similarity=0.277 Sum_probs=110.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++..+++++ |++++++.|+|++|||||||.++|||++|++.+.|.++. ..+|+++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~p--l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~-~~~P~i~GhE~~G~V~~vG~~V~~~~ 77 (179)
T d1uufa1 1 IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQVEKYA 77 (179)
T ss_dssp CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CeEEEEccCCCC--CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc-ccccccccccccccchhhccccccCC
Confidence 999999999887 999999999999999999999999999999999997664 35799999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchH
Q 024011 81 VGDQVCALL------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA 124 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~ 124 (274)
+||+|.... .+|+|+||+++|++.++++|+..... .+..++
T Consensus 78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a~~l 154 (179)
T d1uufa1 78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRADQI 154 (179)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECGGGH
T ss_pred CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh---hHhchh
Confidence 999995311 13789999999999999999664322 233567
Q ss_pred HHHHHHHHhhcCCC
Q 024011 125 CTVWSTVFMTSHLS 138 (274)
Q Consensus 125 ~~a~~~l~~~~~~~ 138 (274)
.++++++ ..+.++
T Consensus 155 ~~a~~a~-~~a~v~ 167 (179)
T d1uufa1 155 NEAYERM-LRGDVK 167 (179)
T ss_dssp HHHHHHH-HTTCSS
T ss_pred HHHHHHH-HHhCcc
Confidence 7888877 344443
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.94 E-value=6.4e-27 Score=182.53 Aligned_cols=139 Identities=24% Similarity=0.261 Sum_probs=116.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++++.|+|+++||||||.++|||++|++.+.|.++. .+|.++|||++|+|+++|+++.+++
T Consensus 9 ~KAav~~~~g~~--l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~--~~P~i~GHE~~G~Vv~~G~~v~~~~ 84 (198)
T d1p0fa1 9 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGVTCVK 84 (198)
T ss_dssp EEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc--ccccccceeeeeeeeecCcccccCc
Confidence 899999999876 999999999999999999999999999999999998754 5799999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||+... .+|+|+||+.+++..++++|+.+
T Consensus 85 ~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~ 164 (198)
T d1p0fa1 85 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKI 164 (198)
T ss_dssp TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTS
T ss_pred CCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCC
Confidence 999997622 12689999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT 154 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~ 154 (274)
+++.++...+...+ +.+++.++|+|+ |++|+
T Consensus 165 ~~~~~~~~~~~~~~----------v~~~~~vlv~G~-G~iGl 195 (198)
T d1p0fa1 165 NVNFLVSTKLTLDQ----------INKAFELLSSGQ-GVRSI 195 (198)
T ss_dssp CGGGGEEEEECGGG----------HHHHHHHTTTSS-CSEEE
T ss_pred CHHHHHHhhcchhh----------cCCCCEEEEECC-CcceE
Confidence 98876654443322 223345777775 66654
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=8.3e-26 Score=174.15 Aligned_cols=145 Identities=35% Similarity=0.499 Sum_probs=134.5
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+|+++||+++++++|||++|.+..++++|++|+|+|++|++|++++|+|+..|++|+++++++++++.++++|+++++|+
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~ 80 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY 80 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEEC
Confidence 58999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcc
Q 024011 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 256 (274)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (274)
+++++.+++++.+++.++|+++|+.|+..+..++++++++|+++.++.........+...+..+.
T Consensus 81 ~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 145 (179)
T d1qora2 81 REEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKG 145 (179)
T ss_dssp TTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTT
T ss_pred CCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccc
Confidence 99999999999999999999999999998999999999999999999887776667766655443
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.93 E-value=2.1e-26 Score=176.10 Aligned_cols=117 Identities=21% Similarity=0.226 Sum_probs=101.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++ +++++.|.|+|+++||+||+.++|||++|++.+.+.... ..+|+++|||++|+|+++|+++++|+
T Consensus 1 MKa~v~~~~~~---l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~-~~~P~i~GhE~~G~V~~vG~~v~~~~ 76 (177)
T d1jqba1 1 MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALG-DRKNMILGHEAVGEVVEVGSEVKDFK 76 (177)
T ss_dssp CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTC-CCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred CeEEEEEeCCC---eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCC-CCCCccCcceeeEEeeecccccceec
Confidence 99999998875 999999999999999999999999999999877654433 25689999999999999999999999
Q ss_pred CCCEEEEEe------------------------------cCCeeeeEEeeeC--CCeEECCCCCCHHhhccCc
Q 024011 81 VGDQVCALL------------------------------GGGGYAEKVAVPA--GQVLPVPSGVSLKDAAAFP 121 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~--~~~~~~p~~~~~~~aa~l~ 121 (274)
+||||+... .+|+|+||+++|. .+++++|+++++++++...
T Consensus 77 vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~ 149 (177)
T d1jqba1 77 PGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHV 149 (177)
T ss_dssp TTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEE
T ss_pred CCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHH
Confidence 999997421 3589999999986 4699999999998876443
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=1e-25 Score=172.09 Aligned_cols=147 Identities=31% Similarity=0.473 Sum_probs=124.9
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+|+++||+++++++|||++++ ..++++|++|||+|++|++|++++|+++..|++|+++++++++++.++++|+++++|+
T Consensus 1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~ 79 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY 79 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeeh
Confidence 589999999999999999995 4799999999999999999999999999999999999999999999999999999876
Q ss_pred CCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+ . ..+.+.++|+|+|||+.| ..++.++++++++|+++.+|...+....++...++.|++++.|++..
T Consensus 80 ~~--~---~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~ 147 (171)
T d1iz0a2 80 AE--V---PERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT 147 (171)
T ss_dssp GG--H---HHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred hh--h---hhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence 53 2 233344578999999988 56889999999999999999887777788899999999999998754
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.93 E-value=6.8e-25 Score=169.31 Aligned_cols=149 Identities=23% Similarity=0.373 Sum_probs=135.0
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
+++.++++|||++|.+..++++|++|||+|++|++|.+++|+++..|++|+++++++++.+.++++|++++++++++++.
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~ 87 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL 87 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCC------CccccchhhHhhcceEEEEeeccc
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG------AKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
+.+.+.+.+.|+|+|||++|++.++..+++++++|+++.+|.... ....+++..++.+++++.|++...
T Consensus 88 ~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~ 162 (182)
T d1v3va2 88 EEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR 162 (182)
T ss_dssp HHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred HHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence 988888888899999999999889999999999999999986432 233456677899999999987653
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.93 E-value=1.7e-25 Score=173.04 Aligned_cols=149 Identities=29% Similarity=0.463 Sum_probs=132.9
Q ss_pred HhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC
Q 024011 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 194 (274)
Q Consensus 115 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 194 (274)
+|||+++++++|||+++.+..++++|++|||+|++|++|++++|+|+..|++++++++++++.+.++++|++++++.++.
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~ 80 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV 80 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence 47889999999999999898999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 195 DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 195 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.+++++.++++++|++||+.|+..++.++++++++|+++.+|..............+.+++++.++.
T Consensus 81 ~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (183)
T d1pqwa_ 81 DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVD 149 (183)
T ss_dssp THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECC
T ss_pred CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEE
Confidence 999999999998999999999999889999999999999999987654433333334456777777765
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.92 E-value=1.2e-24 Score=166.22 Aligned_cols=154 Identities=23% Similarity=0.343 Sum_probs=140.5
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
||+.+||+++++..|+|+++ +..++++|++++|+|++|++|.+++++++..|+ +|+++++++++++.++++|++.+++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~ 79 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN 79 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence 58899999999999999998 557899999999999889999999999999996 9999999999999999999999999
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecccc
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
.+..++.+++.+.+.++++|++||++|+.. ++.++++++++|+++++|.... ...++...++.+++++.|++.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~i~i~Gs~~~~~ 156 (170)
T d1jvba2 80 ASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-DLHYHAPLITLSEIQFVGSLVGNQ 156 (170)
T ss_dssp TTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC-CCCCCHHHHHHHTCEEEECCSCCH
T ss_pred cCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC-ccccCHHHHHhCCcEEEEEecCCH
Confidence 999999999999998888999999999754 7889999999999999997654 468999999999999999987643
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.92 E-value=6.4e-28 Score=185.49 Aligned_cols=156 Identities=23% Similarity=0.267 Sum_probs=128.4
Q ss_pred CEEEEEcCCCCCc---ceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCC---------CCCCCCCCCceeEE
Q 024011 1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---------KGASPYPGLECSGT 68 (274)
Q Consensus 1 m~a~~~~~~~~~~---~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e~~G~ 68 (274)
|||++++++|+|. +++..+.|.|+|++|||+|||++++||++|++.++|.++.. ...|.++|+|++|+
T Consensus 4 ~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~ 83 (175)
T d1gu7a1 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE 83 (175)
T ss_dssp EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred eEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccc
Confidence 7999999999873 35556778888999999999999999999999998865421 24567889999999
Q ss_pred EEEecCCCCCCCCCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh-hcCCCCCCEEEEe
Q 024011 69 ILSVGKNVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM-TSHLSPGESFLVH 146 (274)
Q Consensus 69 V~~vG~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~-~~~~~~g~~vlI~ 146 (274)
|+++|.++..++.||+|.... .+|+|+||+.+|++.++++|+.++.+.+ +....+|+|+++.. ..++++|+++||+
T Consensus 84 V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~ 161 (175)
T d1gu7a1 84 VIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQD 161 (175)
T ss_dssp EEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHH
T ss_pred cccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 999999999999999998654 3588999999999999999998765544 34566778877643 4678999999999
Q ss_pred c-CCchHHHHHHH
Q 024011 147 G-GSSGIGTFAIQ 158 (274)
Q Consensus 147 G-a~g~iG~~~~~ 158 (274)
| |+|++|++++|
T Consensus 162 gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 162 GVANSKDGKQLIT 174 (175)
T ss_dssp HHHTGGGSCEEEE
T ss_pred CccchhhhheEEe
Confidence 8 55789987655
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.91 E-value=1.1e-23 Score=161.30 Aligned_cols=152 Identities=26% Similarity=0.408 Sum_probs=135.4
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
++++.+++++|.+.|+|+++.+..++++|++|+|+|+ |++|.+++|+++..|+ +++++++++++++.++++|++++++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~ 79 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN 79 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence 3567899999999999999888899999999999997 9999999999999999 5566788899999999999999999
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCC-CCccccchhhHhhcceEEEEeecc
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+++++.+++.+.+++ ++|++|||+|.. .++.+++.++++|+++.+|... .....++...++.+++++.|++..
T Consensus 80 ~~~~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g 155 (174)
T d1f8fa2 80 SKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG 155 (174)
T ss_dssp TTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred CCCcCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence 9999999999998876 899999999975 4788899999999999999754 345678999999999999998754
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=2.3e-23 Score=158.37 Aligned_cols=150 Identities=23% Similarity=0.376 Sum_probs=132.1
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+|++++|+++++++|+|++++ ..++++|++|+|.|+ |++|++++|+++..|++|+++++++++++.++++|++.+++.
T Consensus 1 v~f~~aA~l~ca~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccc
Confidence 589999999999999999995 578999999999997 999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCccEEEECCC-hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 192 KTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
++++..+.+.+.+.+ .|.++++++ ...++.++++++++|+++.+|...+ ...++...++.+++++.|++.++
T Consensus 79 ~~~~~~~~~~~~~~g--~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~Gs~~~~ 151 (166)
T d1llua2 79 RQEDPVEAIQRDIGG--AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHIAGSIVGT 151 (166)
T ss_dssp TTSCHHHHHHHHHSS--EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSCC
T ss_pred cchhHHHHHHHhhcC--CcccccccccchHHHHHHHHhcCCcEEEEEEecCC-CccCCHHHHHhCCcEEEEEeecC
Confidence 999988888876643 555555554 4668899999999999999997655 46889999999999999988754
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=1.1e-23 Score=162.42 Aligned_cols=155 Identities=22% Similarity=0.323 Sum_probs=131.6
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+++.+|++.|+++|+|+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.
T Consensus 2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~ 80 (182)
T d1vj0a2 2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR 80 (182)
T ss_dssp CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEec
Confidence 346677889999999999988889999999999997 9999999999999998 89999999999999999999999998
Q ss_pred CCCcHH---HHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCC-Cccccch-hhHhhcceEEEEeecc
Q 024011 192 KTEDFV---ARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~~~~~---~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
.+.+.. +.+.+.+.+.|+|+|||++|+. .++.++++++++|+++++|.... ....++. ..++.|++++.|++.+
T Consensus 81 ~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~ 160 (182)
T d1vj0a2 81 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS 160 (182)
T ss_dssp TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred cccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence 876654 4466777788899999999985 47889999999999999996543 3344554 3467899999999887
Q ss_pred ccc
Q 024011 266 ISG 268 (274)
Q Consensus 266 ~~~ 268 (274)
+..
T Consensus 161 ~~~ 163 (182)
T d1vj0a2 161 DTS 163 (182)
T ss_dssp CHH
T ss_pred CHH
Confidence 543
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.91 E-value=1.5e-23 Score=162.62 Aligned_cols=154 Identities=21% Similarity=0.349 Sum_probs=131.0
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHHcCCC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGAD 186 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~-Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~g~~ 186 (274)
+|+++||+++++++|||++|.+..++++|++++|+ |++|++|++++|+|+..|++|++++++.+. .+.++++|++
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad 80 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT 80 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence 58999999999999999999888999999988775 788999999999999999999999876543 4567899999
Q ss_pred EEEeCCC---CcHHHHHHHHh--CCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEE
Q 024011 187 VCINYKT---EDFVARVKEET--GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261 (274)
Q Consensus 187 ~~~~~~~---~~~~~~~~~~~--~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 261 (274)
++++++. .++.+.+.+.+ .+.++|++||+.|++.+...+++++++|+++.+|...+....++...++.|++++.|
T Consensus 81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~G 160 (189)
T d1gu7a2 81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAG 160 (189)
T ss_dssp EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEE
T ss_pred EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEEE
Confidence 9998643 34444444432 345799999999999999999999999999999988777778999999999999999
Q ss_pred eecc
Q 024011 262 IVPL 265 (274)
Q Consensus 262 ~~~~ 265 (274)
++..
T Consensus 161 ~~~~ 164 (189)
T d1gu7a2 161 FWVT 164 (189)
T ss_dssp CCHH
T ss_pred EEeh
Confidence 8653
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.90 E-value=1.4e-23 Score=160.27 Aligned_cols=151 Identities=21% Similarity=0.264 Sum_probs=130.8
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+|+|+|+.++++++|+|+++ +.+++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++++.++++|++++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~ 78 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN 78 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccc
Confidence 57899999999999999998 5689999999999997 9999999999999998 7999999999999999999999999
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCC-ccccchhh--HhhcceEEEEeec
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~g~~~ 264 (274)
++++++.+.+.+.++++|+|++||++|.. .++.++++++++|+++.+|..... ...++... ...+++++.|+..
T Consensus 79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 156 (174)
T d1jqba2 79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 156 (174)
T ss_dssp GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence 99899999999999999999999999975 478999999999999999976532 22332222 3446788888764
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.3e-22 Score=153.37 Aligned_cols=150 Identities=21% Similarity=0.346 Sum_probs=129.1
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+|+++|| +.+|++++|+++ ++.++++|++|+|+|+ |++|.+++|+++..|+ +|+++++++++++.++++|++++.+
T Consensus 1 vS~e~Aa-l~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~ 77 (171)
T d1pl8a2 1 VTFEEGA-LIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ 77 (171)
T ss_dssp SCHHHHH-HHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence 4788988 557889999998 5578999999999997 9999999999999999 8999999999999999999999998
Q ss_pred CCCCcHHHHHHH--HhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 191 YKTEDFVARVKE--ETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~~~~~~~~~~--~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+.++..+.... ...+.++|++||++|... ++.++++++++|+++++|.... ...+++..++.|++++.|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~-~~~~~~~~~~~k~l~i~Gs~~~ 154 (171)
T d1pl8a2 78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE-MTTVPLLHAAIREVDIKGVFRY 154 (171)
T ss_dssp CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS-CCCCCHHHHHHTTCEEEECCSC
T ss_pred ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC-CCccCHHHHHHCCcEEEEEeCC
Confidence 877765544332 333467999999999864 7889999999999999998765 4579999999999999999865
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=2e-23 Score=159.43 Aligned_cols=149 Identities=18% Similarity=0.242 Sum_probs=129.5
Q ss_pred CCHHhhccCcchHHHHHHHHH---hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE
Q 024011 112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 188 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~ 188 (274)
+|+.+|++++++..|||++++ +....++++++||+|++|++|.+++|+++..|++|+++++++++.+.++++|++++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v 80 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV 80 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc
Confidence 588999999999999997764 33344456799999999999999999999999999999999999999999999999
Q ss_pred EeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+++.++.+ .......|.++|++|+..+...+++++++|+++.+|...+....++...++.|++++.|+..
T Consensus 81 i~~~~~~~~~----~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~ 152 (177)
T d1o89a2 81 LPRDEFAESR----PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDS 152 (177)
T ss_dssp EEGGGSSSCC----SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCS
T ss_pred cccccHHHHH----HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEec
Confidence 9987655432 22334579999999999999999999999999999998887788899999999999999754
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.89 E-value=2e-22 Score=153.68 Aligned_cols=150 Identities=22% Similarity=0.319 Sum_probs=127.4
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++||.+.|.+.|+|+++.+.+++++|++|+|+|+ |++|++++|+++..|+ +|++++.++++++.++++|++.+++.
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~ 80 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP 80 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence 578999999999999999988899999999999996 9999999999999999 68889999999999999999999876
Q ss_pred CC-CcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccC-CEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 192 KT-EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ++......+.+.+.|+|++|||+|.+ .++.++++++++ |+++.+|...+ ...++...++. +++|.|++..
T Consensus 81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~-~~~i~~~~~~~-~k~i~Gs~~G 155 (174)
T d1e3ia2 81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD-EMTIPTVDVIL-GRSINGTFFG 155 (174)
T ss_dssp GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS-EEEEEHHHHHT-TCEEEECSGG
T ss_pred ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC-ccccchHHHhc-cCEEEEEEee
Confidence 43 33555566666667899999999985 488999999995 99999998654 45777766655 5688888754
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.89 E-value=3.3e-22 Score=152.63 Aligned_cols=151 Identities=26% Similarity=0.383 Sum_probs=131.3
Q ss_pred CHHhhccCcchHHHHHHHHHhhc-CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~-~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
.+.++|+++++++|+|+++.+.. .+++|++|+|.|+ |++|.+++|+++..|+ +|+++++++++++.++++|++.+++
T Consensus 5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~ 83 (172)
T d1h2ba2 5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD 83 (172)
T ss_dssp HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeec
Confidence 35788899999999999997765 4799999999997 9999999999999997 7788889999999999999999998
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecccc
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
++++ ..+...+.+.+.++|++||++|+. .++.+++.++++|+++++|... ...+++..++.+++++.|++.++.
T Consensus 84 ~~~~-~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~--~~~~~~~~l~~k~~~i~Gs~~~~~ 158 (172)
T d1h2ba2 84 ARRD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVGNY 158 (172)
T ss_dssp TTSC-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS--CCCCCHHHHHHTTCEEEECCSCCH
T ss_pred Cccc-HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc--cccCCHHHHHhCCcEEEEEEecCH
Confidence 7754 456667778888999999999986 4899999999999999999643 357889999999999999987643
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=3.4e-22 Score=151.99 Aligned_cols=149 Identities=24% Similarity=0.315 Sum_probs=124.8
Q ss_pred CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEe
Q 024011 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
..+++.+|++.|+..|+|+++ +..++++|++|+|+|+ |++|++++|+++..|++++++++++++++.++++|++.+++
T Consensus 3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~ 80 (168)
T d1uufa2 3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVN 80 (168)
T ss_dssp GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEE
Confidence 456788889999999999999 5689999999999997 99999999999999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
+.+.+.. ....+++|.+||++|.. .+..+++.++++|+++.+|...+....++...++.+++++.|++..+
T Consensus 81 ~~~~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~ 152 (168)
T d1uufa2 81 SRNADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG 152 (168)
T ss_dssp TTCHHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred CchhhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence 8765432 23345799999999975 48999999999999999998777666788888999999999988653
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.89 E-value=6.7e-22 Score=150.69 Aligned_cols=149 Identities=23% Similarity=0.368 Sum_probs=124.7
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+|+++|| +.+|++++|+++ ++.++++|++++|+|+ |++|++++|+++..|++|+++++++++++.++++|++..++.
T Consensus 1 VS~e~Aa-l~ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGA-LLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV 77 (170)
T ss_dssp SCHHHHH-THHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence 4788988 557889999998 5568999999999985 999999999999999999999999999999999999887654
Q ss_pred CC--CcH---HHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 192 KT--EDF---VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~--~~~---~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+. .+. .+.+.+ ..+.++|++||++|+.. ++.++++++++|+++.+|.... ...+++..++.|++++.|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~-~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~-~~~~~~~~~~~k~i~i~gs~~~ 155 (170)
T d1e3ja2 78 DPAKEEESSIIERIRS-AIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIKSVFRY 155 (170)
T ss_dssp CTTTSCHHHHHHHHHH-HSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS-CCCCCHHHHHTTTCEEEECCSC
T ss_pred cccccccchhhhhhhc-ccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC-CCCcCHHHHHHCCCEEEEEECC
Confidence 32 232 233333 33567999999999864 7899999999999999997664 4578999999999999998764
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.88 E-value=4.6e-22 Score=152.07 Aligned_cols=152 Identities=21% Similarity=0.258 Sum_probs=126.2
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
.+++.||.+.|.+.|+|+++.+.+++++|++|+|+|+ |++|++++|.++..|+ +|++++.++++++.++++|+++++|
T Consensus 2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in 80 (176)
T d1d1ta2 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS 80 (176)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEEC
Confidence 3589999999999999999988889999999999997 9999999999999996 8999999999999999999999998
Q ss_pred CCCCc-HHHHHHHHhCCCCccEEEECCChhh-HHHhhhcccc-CCEEEEEecCCCCc-cccchhhHhhcceEEEEeecc
Q 024011 191 YKTED-FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI-DGRLFIIGTQGGAK-TELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~-~g~~v~~g~~~~~~-~~~~~~~~~~~~~~i~g~~~~ 265 (274)
..+.+ ..+.+.+.+.+.|+|++|+++|... ...++..+.+ +|+++.+|...... ..++... +.+++++.|++..
T Consensus 81 ~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~i~Gs~~G 158 (176)
T d1d1ta2 81 PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPML-LFTGRTWKGCVFG 158 (176)
T ss_dssp GGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHH-HHTTCEEEECSGG
T ss_pred ccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHH-HhCCCEEEEEEEe
Confidence 76544 4566777777788999999999864 5666666655 59999999876443 3444443 4457899998754
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.88 E-value=4.2e-22 Score=151.53 Aligned_cols=150 Identities=25% Similarity=0.366 Sum_probs=132.0
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+|+++||+++++++|+|++++ ..++++|++|+|+|+ |++|.+++++++..|++|+++++++++++.++++|++.+++.
T Consensus 1 ls~eeAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccc
Confidence 589999999999999999995 568999999999986 999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 192 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
.++++.+.+.+.+.+ .|.+++++++ ..++.++++++++|+++.+|.... ...++...++.+++++.|++.+.
T Consensus 79 ~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~-~~~~~~~~~~~~~~~i~gs~~~~ 151 (168)
T d1rjwa2 79 LKEDAAKFMKEKVGG--VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGT 151 (168)
T ss_dssp TTSCHHHHHHHHHSS--EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSCC
T ss_pred ccchhhhhcccccCC--CceEEeecCCHHHHHHHHHHhccCCceEecccccC-CCCCCHHHHHHCCcEEEEEeeCC
Confidence 999998888888764 4444455554 568999999999999999997654 45788899999999999988654
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.88 E-value=1.3e-21 Score=149.32 Aligned_cols=150 Identities=23% Similarity=0.318 Sum_probs=122.7
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
|.+||.+.|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++|++
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~ 80 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK 80 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence 45789999999999999888899999999999997 9999999999999997 799999999999999999999999875
Q ss_pred C-CcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhcccc-CCEEEEEecCCCCccccchhh-HhhcceEEEEeecc
Q 024011 193 T-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI-DGRLFIIGTQGGAKTELNITS-LFAKRLTVQGIVPL 265 (274)
Q Consensus 193 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~-~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~ 265 (274)
. +++.++..+.+.++++|++||++|... ....+..+.+ +|+++++|..... ..+++.. ++.++++|.|++..
T Consensus 81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~-~~~~~~~~~~~~~~~i~Gs~~G 156 (174)
T d1p0fa2 81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN-ERLPLDPLLLLTGRSLKGSVFG 156 (174)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT-CCEEECTHHHHTTCEEEECSGG
T ss_pred CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc-cccccCHHHHhCCCEEEEEEeC
Confidence 4 334556666666678999999999854 6777777766 5999999976532 2444332 34567899998743
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.87 E-value=3.7e-22 Score=151.78 Aligned_cols=147 Identities=21% Similarity=0.253 Sum_probs=124.4
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++.+.||++.|+..|+|++++ ..++++|++++|+|+ |++|++++|+++..|++|+++++++++++.++++|+++++++
T Consensus 1 lp~e~AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~ 78 (168)
T d1piwa2 1 IPSHLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIAT 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeec
Confidence 356788999999999999995 578999999999997 999999999999999999999999999999999999999886
Q ss_pred CCC-cHHHHHHHHhCCCCccEEEECCChh---hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 192 KTE-DFVARVKEETGGKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~---~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
.++ ++.+ .. ..++|.++++.+.. .++.+++.++++|+++.+|..... ..++...++.+++++.|+...+
T Consensus 79 ~~~~~~~~----~~-~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~Gs~~g~ 151 (168)
T d1piwa2 79 LEEGDWGE----KY-FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH-EMLSLKPYGLKAVSISYSALGS 151 (168)
T ss_dssp GGTSCHHH----HS-CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS-CCEEECGGGCBSCEEEECCCCC
T ss_pred cchHHHHH----hh-hcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc-ccccHHHHHhCCcEEEEEeeCC
Confidence 543 3322 22 24699999998763 267889999999999999976544 5788888999999999987653
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.87 E-value=2.4e-21 Score=148.41 Aligned_cols=152 Identities=21% Similarity=0.250 Sum_probs=123.0
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++||++.|++.|+|+++.+.+++++|++|+|+|+ |++|.+++|+++..|+ +|+++++++++++.++++|++++++.
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~ 80 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 80 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence 578899999999999999988899999999999998 7999999999999997 78888888999999999999999987
Q ss_pred CC-CcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeecc
Q 024011 192 KT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+ .+......+.+.+.++|++||++|... ...+...++++++++.++.... .....+....+.+++++.|++..
T Consensus 81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G 157 (176)
T d2fzwa2 81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG 157 (176)
T ss_dssp GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeee
Confidence 53 344555555555668999999999755 6777888888888887755443 33344444455678899998754
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=8.5e-22 Score=152.29 Aligned_cols=152 Identities=24% Similarity=0.353 Sum_probs=120.3
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCC--CEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHH-HHHHcCCCE
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLA-VCKDLGADV 187 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g--~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~-~~~~~g~~~ 187 (274)
+|+.+.+ ++++..|||+++.+..++++| ++|||+||+|++|.+++|+|+..|++ |+.++.++++.. ..+++|+++
T Consensus 2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~ 80 (187)
T d1vj1a2 2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA 80 (187)
T ss_dssp GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence 5666665 788999999999999999987 89999999999999999999999996 555566666554 445899999
Q ss_pred EEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccc---------hhhHhhcceE
Q 024011 188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELN---------ITSLFAKRLT 258 (274)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~---------~~~~~~~~~~ 258 (274)
++|+.++++.+.+.+.++ .|+|+|||+.|+..++..+++++++|+++.+|...+.....+ ...++.++++
T Consensus 81 vi~~~~~~~~~~~~~~~~-~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~ 159 (187)
T d1vj1a2 81 AVNYKTGNVAEQLREACP-GGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNIT 159 (187)
T ss_dssp EEETTSSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCE
T ss_pred EeeccchhHHHHHHHHhc-cCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceE
Confidence 999999999999988875 689999999999999999999999999999987654222111 2335568899
Q ss_pred EEEeecc
Q 024011 259 VQGIVPL 265 (274)
Q Consensus 259 i~g~~~~ 265 (274)
+.|+...
T Consensus 160 ~~g~~~~ 166 (187)
T d1vj1a2 160 RERFTVL 166 (187)
T ss_dssp EEECCGG
T ss_pred EEEeEec
Confidence 9987654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.87 E-value=5.8e-21 Score=146.23 Aligned_cols=152 Identities=19% Similarity=0.210 Sum_probs=124.5
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++||+++|++.|+|+++.+.+++++|++|+|+|+ |++|.+++++++..|+ +|+++++++++++.++++|+++.++.
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~ 80 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 80 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence 578899999999999999988899999999999998 8899999999999986 99999999999999999999998876
Q ss_pred C-CCcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecC-CCCccccchhhHhhcceEEEEeecc
Q 024011 192 K-TEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQ-GGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~-~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~-~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
. .++..+...+.+.+.|+|++||+.|... .+.+++.+++++..+.++.. ...........++.+++++.|++..
T Consensus 81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G 157 (176)
T d2jhfa2 81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFG 157 (176)
T ss_dssp GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEe
Confidence 4 4455666667777779999999999865 67788888887555555444 3333334444566789999998754
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.7e-22 Score=152.74 Aligned_cols=141 Identities=19% Similarity=0.281 Sum_probs=119.8
Q ss_pred hHHHHHHH---HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 123 VACTVWST---VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 123 ~~~~a~~~---l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
+..|||.+ |.+....+++++|||+||+|++|.+++|+++..|++|+.+++++++.+.++++|++.++++++ +..+
T Consensus 4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~--~~~~ 81 (167)
T d1tt7a2 4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISRED--VYDG 81 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHH--HCSS
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccc--hhch
Confidence 45667654 445555667889999999999999999999999999999999999999999999999987542 1112
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
..+.+.++++|+|||+.|+..++..+++++++|+++.+|...+....++...++.|++++.|+...
T Consensus 82 ~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~ 147 (167)
T d1tt7a2 82 TLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV 147 (167)
T ss_dssp CCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred hhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence 233455678999999999999999999999999999999999888899999999999999997643
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.87 E-value=5.4e-21 Score=146.32 Aligned_cols=152 Identities=18% Similarity=0.187 Sum_probs=125.3
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++||++.|++.|+|+++.+.+++++|++|+|+|+ |++|.++++.++..|+ +|+++++++++++.++++|+++++|+
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~ 80 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 80 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence 578999999999999999988899999999999997 8899999999988887 79999999999999999999999987
Q ss_pred CCC-cHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 192 KTE-DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++ +..++..+.+.++|+|++||++|... +..+..++.+++.++.++.........+...++.+++++.|++..
T Consensus 81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G 156 (175)
T d1cdoa2 81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFG 156 (175)
T ss_dssp GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGG
T ss_pred CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEe
Confidence 654 45667777777778999999999854 667777777775555554444445566677777788999998754
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.84 E-value=5.3e-20 Score=142.68 Aligned_cols=145 Identities=18% Similarity=0.242 Sum_probs=125.5
Q ss_pred HhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCC
Q 024011 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKT 193 (274)
Q Consensus 115 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 193 (274)
++.++|..++.|+|+++ +.+++++|++|+|+|+ |++|++++++++..|+ +|++++.++++++.++++|++++++...
T Consensus 2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~ 79 (195)
T d1kola2 2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD 79 (195)
T ss_dssp HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC
Confidence 56778999999999998 5689999999999997 9999999999999998 8999999999999999999999999988
Q ss_pred CcHHHHHHHHhCCCCccEEEECCCh----------------hhHHHhhhccccCCEEEEEecCCCCc------------c
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQGGAK------------T 245 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~~~~~------------~ 245 (274)
.++.+.+.+.+++.++|++||++|. ..++.+++.++++|+++.+|.+.... .
T Consensus 80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~ 159 (195)
T d1kola2 80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL 159 (195)
T ss_dssp SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence 9999999999999999999999984 25788999999999999999765321 2
Q ss_pred ccchhhHhhcceEEEE
Q 024011 246 ELNITSLFAKRLTVQG 261 (274)
Q Consensus 246 ~~~~~~~~~~~~~i~g 261 (274)
.+++..++.|++++.+
T Consensus 160 ~~~~~~~~~k~~~i~~ 175 (195)
T d1kola2 160 SIRFGLGWAKSHSFHT 175 (195)
T ss_dssp CCCHHHHHHTTCEEEE
T ss_pred eeeHHHHHhhcceecc
Confidence 3455556677777754
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.71 E-value=2.2e-16 Score=115.76 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=99.7
Q ss_pred EEEEEcCC--CCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 2 KAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 2 ~a~~~~~~--~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|+|++.++ |.| +.|++++.+.|+|++||||||+++.++++........ .. ...++..+.+|+|++ ++.+
T Consensus 5 k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~-~~----~g~~~~g~~vg~Vv~--S~~~ 77 (147)
T d1v3va1 5 KSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR-LK----EGAVMMGQQVARVVE--SKNS 77 (147)
T ss_dssp EEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG-SC----TTSBCCCCEEEEEEE--ESCT
T ss_pred EEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc-cc----cCCccccceEEEEEE--eCCC
Confidence 67888875 544 5699999999999999999999999998875443321 11 122445678999988 6778
Q ss_pred CCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHH-----hhccCcchHHHH-HHHHHhhcCCCCCCEEEE
Q 024011 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK-----DAAAFPEVACTV-WSTVFMTSHLSPGESFLV 145 (274)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~-----~aa~l~~~~~~a-~~~l~~~~~~~~g~~vlI 145 (274)
+|++||+|.+. ++|++|.+++...+.++|+.++.. ..+++....+|| |..+ ....+.|+++++
T Consensus 78 ~f~~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl--~~~~k~Getvv~ 146 (147)
T d1v3va1 78 AFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM--LNGANLGKAVVT 146 (147)
T ss_dssp TSCTTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH--HTTCCSSEEEEE
T ss_pred cccCCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh--hCCCCCCCEEEe
Confidence 99999999876 679999999999999998765433 344566677764 5455 444577999986
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=3.3e-15 Score=96.16 Aligned_cols=74 Identities=23% Similarity=0.304 Sum_probs=67.3
Q ss_pred CCHHhhccCcchHHHHHHHHH---hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC
Q 024011 112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~ 185 (274)
+|+++|+.++.+..|||.++. +....++++++||+|++|++|.+++|+++..|++|+++++++++.++++++|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence 588999999999999998764 44567889999999999999999999999999999999999999999999874
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.02 E-value=6.7e-10 Score=88.28 Aligned_cols=79 Identities=27% Similarity=0.377 Sum_probs=61.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCc----HHHHHHHHhCCCCccEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTED----FVARVKEETGGKGVDVI 212 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~----~~~~~~~~~~~~~~d~v 212 (274)
-.||++||+|+++|+|.++++.+.+.|++|++++|+++..+..++.+...+ .|..+.+ +.+++.+..+ ++|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iDiL 80 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALG--RVDVL 80 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcC--CCCeE
Confidence 469999999999999999999999999999999999988877777765433 3444433 3334444444 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|||+|.
T Consensus 81 VnnAG~ 86 (248)
T d2d1ya1 81 VNNAAI 86 (248)
T ss_dssp EECCCC
T ss_pred EEeCcC
Confidence 999984
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.96 E-value=1.5e-09 Score=86.42 Aligned_cols=102 Identities=22% Similarity=0.394 Sum_probs=72.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCCc----HHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~d 210 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +++..... |..+.+ +.+.+.+..+ ++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~iD 82 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG--TLN 82 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC--SCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhC--CCC
Confidence 5899999999999999999999999999999999998876654 56654432 333332 2333344443 489
Q ss_pred EEEECCChhh-----------H---------------HHhhhccc-cCCEEEEEecCCC
Q 024011 211 VILDCMGASY-----------F---------------QRNLGSLN-IDGRLFIIGTQGG 242 (274)
Q Consensus 211 ~vi~~~g~~~-----------~---------------~~~~~~l~-~~g~~v~~g~~~~ 242 (274)
++|+|+|... + ..++..|+ .+|+|+.+++..+
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~ 141 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS 141 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence 9999999420 1 13344454 5689998887653
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.92 E-value=1.8e-09 Score=86.04 Aligned_cols=78 Identities=28% Similarity=0.468 Sum_probs=58.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcH----HHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDF----VARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~----~~~~~~~~~~~~~d 210 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+. .+.+.+.++ ++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD 81 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG--SVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcC--Ccc
Confidence 5899999999999999999999999999999999998876654 5554322 34444333 333334444 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ilVnnAg~ 89 (254)
T d1hdca_ 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEecCcc
Confidence 99999984
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=2.8e-09 Score=84.35 Aligned_cols=78 Identities=23% Similarity=0.360 Sum_probs=58.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
.|+++||+|+++|+|.+++..+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g-- 83 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG-- 83 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC--
Confidence 5899999999999999999999999999999999999876553 4554422 2444433333 3333343
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 84 ~idilinnag~ 94 (244)
T d1yb1a_ 84 DVSILVNNAGV 94 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCceeEeeccc
Confidence 49999999995
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=3.5e-09 Score=84.40 Aligned_cols=78 Identities=22% Similarity=0.323 Sum_probs=57.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc----C-CCE---EEeCCCCc----HHHHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----G-ADV---CINYKTED----FVARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g-~~~---~~~~~~~~----~~~~~~~~~~ 205 (274)
.||++||+|+++|+|.++++.+.+.|++|++++|++++++.+. ++ + ... ..|..+.+ +.+.+.+..+
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4899999999999999999999999999999999998876553 22 1 121 13444433 2333344444
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 82 --~iDilVnnAg~ 92 (254)
T d2gdza1 82 --RLDILVNNAGV 92 (254)
T ss_dssp --CCCEEEECCCC
T ss_pred --CcCeecccccc
Confidence 49999999995
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.82 E-value=7.1e-09 Score=82.85 Aligned_cols=78 Identities=19% Similarity=0.365 Sum_probs=55.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHHH-----HcCCCEE---EeCCCCc----HHHHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK-----DLGADVC---INYKTED----FVARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~~-----~~g~~~~---~~~~~~~----~~~~~~~~~~ 205 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++ +.++.+. +.+.... .|..+.+ +.+.+.+.++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999874 4444332 2344433 2444433 3333444444
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 83 --~iDiLVnnAG~ 93 (260)
T d1x1ta1 83 --RIDILVNNAGI 93 (260)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCcEEEeeccc
Confidence 49999999994
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=1.7e-08 Score=79.74 Aligned_cols=78 Identities=29% Similarity=0.439 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC---EEEeCCCCcH----HHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD---VCINYKTEDF----VARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~----~~~~~~~~~~~~~d 210 (274)
+||+++|+|+++|+|.++++.+.+.|++|++++|++++++.+. +++.. ...|..+.+. .+.+.+..+ ++|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFG--EVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTC--SCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccC--Ccc
Confidence 5899999999999999999999999999999999999887664 34432 2235444333 333333443 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|||+|.
T Consensus 81 ilVnnAg~ 88 (243)
T d1q7ba_ 81 ILVNNAGI 88 (243)
T ss_dssp EEEECCCC
T ss_pred eehhhhhh
Confidence 99999984
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.79 E-value=2.5e-10 Score=90.20 Aligned_cols=74 Identities=28% Similarity=0.324 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcH----HHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF----VARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~d~vi~ 214 (274)
.||++||+|+++|||.++++.+.+.|++|++++|+++..+.+. ....|..+.+. .+.+.+..+ ++|++||
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~g--~iDiLVn 79 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQG--PVEVLVS 79 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHHS--SCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhcC--CceEEEe
Confidence 6899999999999999999999999999999999877654221 12234444333 333444443 4999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 80 nAG~ 83 (237)
T d1uzma1 80 NAGL 83 (237)
T ss_dssp ECSC
T ss_pred eecc
Confidence 9984
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.78 E-value=1.7e-08 Score=79.81 Aligned_cols=78 Identities=21% Similarity=0.292 Sum_probs=60.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.||++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+..+++.+..+ ++|++|||
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g--~iDilVnn 83 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVG--PVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCC--CCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhC--CceEEEec
Confidence 6899999999999999999999999999999999999887665 4443333 35555444455544443 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 84 Ag~ 86 (244)
T d1pr9a_ 84 AAV 86 (244)
T ss_dssp CCC
T ss_pred ccc
Confidence 985
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=1.3e-08 Score=81.79 Aligned_cols=79 Identities=27% Similarity=0.296 Sum_probs=56.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-----cCCCEE-E--eCCCCcHHH----HHHHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC-I--NYKTEDFVA----RVKEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~~~~-~--~~~~~~~~~----~~~~~~~ 205 (274)
-.|+++||+||++|+|.++++.+.+.|++|++++|++++++.+.+ .+.... . |.+.....+ .+.+..+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 358999999999999999999999999999999999998876642 232222 1 222222222 2223333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.+|++++|+|.
T Consensus 92 --~~~~li~nag~ 102 (269)
T d1xu9a_ 92 --GLDMLILNHIT 102 (269)
T ss_dssp --SCSEEEECCCC
T ss_pred --Ccccccccccc
Confidence 48999999884
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.76 E-value=2.2e-08 Score=78.97 Aligned_cols=78 Identities=17% Similarity=0.216 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.|+++||+|+++|+|.++++.+.+.|++|++++|++++++.+. ++..... .|..+.+..+.+.+.. .++|++|||
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn 81 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence 5899999999999999999999999999999999999886664 4443333 3444444444444444 359999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 Ag~ 84 (242)
T d1cyda_ 82 AAL 84 (242)
T ss_dssp CCC
T ss_pred Ccc
Confidence 984
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.76 E-value=5.2e-10 Score=88.36 Aligned_cols=98 Identities=23% Similarity=0.273 Sum_probs=65.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC------CcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT------EDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~d~v 212 (274)
+||++||+|+++++|.++++.+.+.|++|+++++++.+.. ........+. +.....+.+..+..++|++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l 75 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 75 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence 4899999999999999999999999999999987665321 1111111111 1223333344455569999
Q ss_pred EECCChh----h--------H---------------HHhhhccccCCEEEEEecCC
Q 024011 213 LDCMGAS----Y--------F---------------QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 213 i~~~g~~----~--------~---------------~~~~~~l~~~g~~v~~g~~~ 241 (274)
|||+|.. . + ..++..|+++|+++.++...
T Consensus 76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~ 131 (236)
T d1dhra_ 76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 131 (236)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHH
Confidence 9999841 0 1 12344578889999887765
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.75 E-value=3.6e-08 Score=77.79 Aligned_cols=78 Identities=19% Similarity=0.322 Sum_probs=59.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEE-EeCCCCcH----HHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDF----VARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~----~~~~~~~~~~~~~d~v 212 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.+.+ ++...+ .|..+.+. .+.+.+.++ ++|++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iDil 81 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLG--RLDGV 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHS--SCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcC--CceEE
Confidence 48999999999999999999999999999999999998877654 444332 34444333 333344444 49999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|||+|.
T Consensus 82 VnnAG~ 87 (242)
T d1ulsa_ 82 VHYAGI 87 (242)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999984
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.74 E-value=6.8e-08 Score=76.57 Aligned_cols=78 Identities=26% Similarity=0.371 Sum_probs=58.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-----HHcCCCEE---EeCCCCc----HHHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----KDLGADVC---INYKTED----FVARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-----~~~g~~~~---~~~~~~~----~~~~~~~~~~~ 206 (274)
+|+++||+|+++|||.++++.+.+.|++|++++|++++++.. ++.+.... .|..+.+ +.+.+.+..+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 82 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG- 82 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence 489999999999999999999999999999999998876543 23454432 2444433 3334444444
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 83 -~iDiLVnnAG~ 93 (251)
T d1vl8a_ 83 -KLDTVVNAAGI 93 (251)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 49999999984
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.73 E-value=2.5e-08 Score=79.40 Aligned_cols=78 Identities=23% Similarity=0.341 Sum_probs=55.5
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCCc----HHHHHHHHhCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTED----FVARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~----~~~~~~~~~~~ 206 (274)
.||++||+||+| |+|.++++.+.+.|++|+++.|+++..+.++ ..+....+ |..+.+ +.+.+.+..+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG- 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC-
Confidence 589999999976 8999999999999999999998877554433 33444443 333332 2333344444
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 86 -~iDilVnnag~ 96 (256)
T d1ulua_ 86 -GLDYLVHAIAF 96 (256)
T ss_dssp -SEEEEEECCCC
T ss_pred -CceEEEecccc
Confidence 49999999974
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.73 E-value=1e-08 Score=81.53 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCEE----EeCC-CC----cHHHHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVC----INYK-TE----DFVARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~----~~~~-~~----~~~~~~~~~~~ 205 (274)
.||++||+|+++|||.++++.+.+.|++|+++.|+.++.+.+.+ .+...+ .|.. +. ++.+.+.+..+
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 48999999999999999999999999999999887765544432 222222 2332 21 12333344443
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 --~iDilvnnAG~ 94 (254)
T d1sbya1 84 --TVDILINGAGI 94 (254)
T ss_dssp --CCCEEEECCCC
T ss_pred --CCCEEEeCCCC
Confidence 49999999995
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.73 E-value=6.3e-09 Score=82.78 Aligned_cols=75 Identities=13% Similarity=-0.014 Sum_probs=55.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----CCCEEEeCC-CCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GADVCINYK-TEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~~~~~~~-~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++||+|+++++|+++++.+.+.|++|++.+|+.+++++++.. ....+.+.+ ...+.+.+.+.++. +|++|||+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~--iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQ--VDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSC--CCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCC--CCEEEECC
Confidence 789999999999999999999999999999998887776532 222222222 12344555555544 99999998
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 80 g~ 81 (252)
T d1zmta1 80 IF 81 (252)
T ss_dssp CC
T ss_pred cC
Confidence 74
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=4.3e-08 Score=77.64 Aligned_cols=78 Identities=24% Similarity=0.328 Sum_probs=59.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEE--eCCCCcHH----HHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFV----ARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d~ 211 (274)
.||++||+|++++||.++++.+.+.|++|++++|++++++.+.+.... ..+ |..+.+.. +++.+..+ ++|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g--~iDi 82 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFG--RLDC 82 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcC--CCCE
Confidence 599999999999999999999999999999999999998877654333 222 44443323 33334443 4999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 83 lVnnAG~ 89 (250)
T d1ydea1 83 VVNNAGH 89 (250)
T ss_dssp EEECCCC
T ss_pred EEecccc
Confidence 9999983
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.69 E-value=2.4e-07 Score=70.19 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=59.0
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-----cC-CCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LG-ADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g-~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
..--+|++++|+|++|++|..+++.+.+.|++|++++|+.++++.+.+ .. .....|..+. +.+.+..+ +
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~--~ 92 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASRAEAVK--G 92 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHHHHHTT--T
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH---HHHHHHhc--C
Confidence 334479999999999999999999999999999999999988766542 12 2333444432 33444444 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 93 iDilin~Ag~ 102 (191)
T d1luaa1 93 AHFVFTAGAI 102 (191)
T ss_dssp CSEEEECCCT
T ss_pred cCeeeecCcc
Confidence 8999999985
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.68 E-value=9.6e-10 Score=86.71 Aligned_cols=97 Identities=18% Similarity=0.249 Sum_probs=62.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC------cHHHHHHHHhCCCCccEEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE------DFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~d~vi 213 (274)
+.+|||+|+++++|.++++.+.+.|++|++++|++++.. ........+.. ...+.+........+|++|
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li 76 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 76 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence 356899999999999999999999999999998876421 11111111111 1122233333445699999
Q ss_pred ECCChh------------hH---------------HHhhhccccCCEEEEEecCC
Q 024011 214 DCMGAS------------YF---------------QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 214 ~~~g~~------------~~---------------~~~~~~l~~~g~~v~~g~~~ 241 (274)
+|+|.. .+ ...+..|+++|+++.++...
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~ 131 (235)
T d1ooea_ 77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 131 (235)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence 999841 01 12344577788988887654
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=5.9e-08 Score=78.04 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=68.3
Q ss_pred CCEE-EEecCCchHHHHHHHHHHH-cCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCCc----HHHHHHHHhCC
Q 024011 140 GESF-LVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTED----FVARVKEETGG 206 (274)
Q Consensus 140 g~~v-lI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~----~~~~~~~~~~~ 206 (274)
|++| ||||+++|||.++++.+.+ .|++|++++|++++++.+. +.+.. .. .|..+.+ +.+.+.+..+
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g- 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG- 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC-
Confidence 5666 8999999999999987665 5899999999999875543 33432 22 3444433 3344444444
Q ss_pred CCccEEEECCChh-----------h---------------HHHhhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~ 240 (274)
++|++|||+|.. . ...++..|++.|+++.++..
T Consensus 81 -~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~ 139 (275)
T d1wmaa1 81 -GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI 139 (275)
T ss_dssp -SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred -CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 499999999942 0 12345667888999998764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.65 E-value=8.1e-08 Score=75.31 Aligned_cols=74 Identities=23% Similarity=0.263 Sum_probs=57.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+||++||+|+++|+|.++++.+.+.|++|++++|+++.++ +.+... +..+..+..+.+.+..+. +|++|+|+|.
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~~~~~~-~~~Dv~~~~~~~~~~~g~--iD~lVnnAG~ 76 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGHRY-VVCDLRKDLDLLFEKVKE--VDILVLNAGG 76 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCSEE-EECCTTTCHHHHHHHSCC--CSEEEECCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---hcCCcE-EEcchHHHHHHHHHHhCC--CcEEEecccc
Confidence 5899999999999999999999999999999999987654 334332 223333345666666654 9999999984
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=4.1e-08 Score=77.60 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=61.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.||++||+|+++++|.++++.+.+.|++|++++|++++++++.+...... .|.+..+..+...+..+ ++|++++++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~id~lVn~a 82 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE--RLDVLFNVA 82 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccc--cceeEEecc
Confidence 58999999999999999999999999999999999998877765443322 34444555555555544 499999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 83 g~ 84 (245)
T d2ag5a1 83 GF 84 (245)
T ss_dssp CC
T ss_pred cc
Confidence 85
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.63 E-value=8.4e-08 Score=75.63 Aligned_cols=78 Identities=21% Similarity=0.339 Sum_probs=58.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcH----HHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDF----VARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~----~~~~~~~~~~~~~d 210 (274)
.||+++|+|++++||.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+. .+.+.+..+ ++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id 82 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG--GLH 82 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhC--CCe
Confidence 5899999999999999999999999999999999999886664 4443222 34444332 333344443 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ilinnAG~ 90 (244)
T d1nffa_ 83 VLVNNAGI 90 (244)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999985
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.63 E-value=6.9e-08 Score=76.76 Aligned_cols=78 Identities=19% Similarity=0.388 Sum_probs=59.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEE---EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVC---INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
+||+++|+|+++|||.++++.+.+.|++|++++|++++++.+ ++++.... .|..+.+.. +.+.+..+ ++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g--~iD 81 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWG--SID 81 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhC--Ccc
Confidence 589999999999999999999999999999999999887655 46665443 244443333 33333443 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|||+|.
T Consensus 82 ilVnnAg~ 89 (256)
T d1k2wa_ 82 ILVNNAAL 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEeeccc
Confidence 99999994
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.63 E-value=3.1e-07 Score=72.19 Aligned_cols=78 Identities=26% Similarity=0.354 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEE---EeCCCCcH----HHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVC---INYKTEDF----VARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~----~~~~~~~~~~~~~d 210 (274)
.||++||+|+++++|.++++.+.+.|++|+++.|++++++.+ ++++.... .|..+.+. .+.+.+.++ ++|
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g--~iD 81 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG--RLH 81 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC--Ccc
Confidence 689999999999999999999999999999999999987555 45665443 24444332 333344444 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 iLinnAg~ 89 (241)
T d2a4ka1 82 GVAHFAGV 89 (241)
T ss_dssp EEEEGGGG
T ss_pred Eecccccc
Confidence 99999985
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.62 E-value=4e-08 Score=77.40 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=54.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCe-------EEEEecChhhHHHHH----HcCCCEE---EeCCCCcH----HHHHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVR-------VFVTAGSEEKLAVCK----DLGADVC---INYKTEDF----VARVKEE 203 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~-------v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~----~~~~~~~ 203 (274)
.+||+|+++|+|.++++.+.+.|++ |+..+|++++++.+. +.|.... .|..+.+. .+.+.+.
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4799999999999999999999997 889999988876553 3444322 24444332 3334444
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
.+ ++|++|||+|.
T Consensus 83 ~g--~iDilvnnAg~ 95 (240)
T d2bd0a1 83 YG--HIDCLVNNAGV 95 (240)
T ss_dssp TS--CCSEEEECCCC
T ss_pred cC--Ccceeeccccc
Confidence 44 49999999984
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.61 E-value=1.4e-07 Score=74.98 Aligned_cols=77 Identities=32% Similarity=0.437 Sum_probs=57.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHH----HHHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~----~~~~~~~~~~ 208 (274)
||.+||+|+++|||.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+..+ .+.+.++ +
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g--~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG--P 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--S
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC--C
Confidence 78899999999999999999999999999999998877554 34554433 2444433333 3333343 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|||+|.
T Consensus 80 iDilVnnAG~ 89 (257)
T d2rhca1 80 VDVLVNNAGR 89 (257)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEecccc
Confidence 9999999985
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.60 E-value=8.4e-08 Score=77.14 Aligned_cols=78 Identities=28% Similarity=0.443 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCc----HHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTED----FVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~d 210 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +++.... .|..+.+ +.+.+.+..+ ++|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~id 81 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFG--KID 81 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhC--Ccc
Confidence 5899999999999999999999999999999999999886654 4554332 2444433 2333334443 499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++++|+|.
T Consensus 82 ilvnnAG~ 89 (276)
T d1bdba_ 82 TLIPNAGI 89 (276)
T ss_dssp EEECCCCC
T ss_pred cccccccc
Confidence 99999983
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.60 E-value=1.4e-07 Score=75.06 Aligned_cols=78 Identities=21% Similarity=0.306 Sum_probs=58.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCc----HHHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED----FVARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~----~~~~~~~~~~~~ 207 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+ +.+.+.+.++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-- 81 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG-- 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence 5899999999999999999999999999999999998876553 3454432 2444432 3334444444
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 82 ~iDilVnnaG~ 92 (260)
T d1zema1 82 KIDFLFNNAGY 92 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCeehhhhcc
Confidence 49999999984
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=1.2e-07 Score=75.24 Aligned_cols=78 Identities=19% Similarity=0.305 Sum_probs=58.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcH----HHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDF----VARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~----~~~~~~~~~~~ 207 (274)
.||++||+|+++|+|.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+. .+.+.+..+
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g-- 87 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG-- 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 589999999999999999999999999999999998876544 45554433 24444332 333344444
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++++|+|.
T Consensus 88 ~iDilvnnAG~ 98 (255)
T d1fmca_ 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEeeeCCcC
Confidence 49999999985
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.59 E-value=2.4e-07 Score=75.28 Aligned_cols=78 Identities=22% Similarity=0.307 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh---------hhHHH----HHHcCCCEEEeCCCCcH----HHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLAV----CKDLGADVCINYKTEDF----VARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~---------~~~~~----~~~~g~~~~~~~~~~~~----~~~~~ 201 (274)
.||++||+|+++|||.++++.+.+.|++|++.+++. +.++. +...+.....|..+.+. .+.+.
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 589999999999999999999999999999986543 23322 23445555556554333 33333
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|||+|.
T Consensus 86 ~~~G--~iDiLVnNAGi 100 (302)
T d1gz6a_ 86 DTFG--RIDVVVNNAGI 100 (302)
T ss_dssp HHTS--CCCEEEECCCC
T ss_pred HHcC--CCCEEEECCcc
Confidence 3443 49999999994
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=2.9e-08 Score=79.08 Aligned_cols=78 Identities=23% Similarity=0.348 Sum_probs=58.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCC-CEE----EeCCCCc----HHHHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGA-DVC----INYKTED----FVARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~-~~~----~~~~~~~----~~~~~~~~~~ 205 (274)
+||++||+|++++||.++++.+.+.|++|++++|++++++.+ ++.+. ..+ .|..+++ +.+.+.+.++
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 589999999999999999999999999999999999887654 33332 122 2444433 3344445554
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 89 --~iD~lVnnAg~ 99 (257)
T d1xg5a_ 89 --GVDICINNAGL 99 (257)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEecccc
Confidence 49999999985
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.57 E-value=2.1e-07 Score=73.93 Aligned_cols=78 Identities=24% Similarity=0.353 Sum_probs=57.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc--CCCEE---EeCCCCcH----HHHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL--GADVC---INYKTEDF----VARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~--g~~~~---~~~~~~~~----~~~~~~~~~ 205 (274)
.||+++|+|+++|||.++++.+.+.|++|++++|++++++.+. +. +.... .|..+.+. .+.+.+.++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999998876543 22 22222 24444332 333444444
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 83 --~iDiLVnnAG~ 93 (258)
T d1iy8a_ 83 --RIDGFFNNAGI 93 (258)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCcc
Confidence 49999999983
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.57 E-value=1.7e-07 Score=74.89 Aligned_cols=78 Identities=15% Similarity=0.306 Sum_probs=57.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC---CCEE--EeCCCCcH----HHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVC--INYKTEDF----VARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~--~~~~~~~~----~~~~~~~~~~~~ 208 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.+. ++. .... .|..+.+. .+.+.+..+ .
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~ 82 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG--K 82 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC--C
Confidence 6899999999999999999999999999999999999887654 332 2222 24444332 333334444 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 83 iD~lVnnAG~ 92 (268)
T d2bgka1 83 LDIMFGNVGV 92 (268)
T ss_dssp CCEEEECCCC
T ss_pred cceecccccc
Confidence 9999999984
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.56 E-value=1.8e-07 Score=74.05 Aligned_cols=78 Identities=19% Similarity=0.313 Sum_probs=58.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC--CC-EE--EeCCCCc----HHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--AD-VC--INYKTED----FVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g--~~-~~--~~~~~~~----~~~~~~~~~~~~~ 208 (274)
.|+++||+|+++|||.++++.+.+.|++|++++|++++++.+. ++. .. .. .|..+.+ +.+.+.+.++ +
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~ 82 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG--P 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--S
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC--C
Confidence 5899999999999999999999999999999999998877664 222 12 22 2444433 3344444454 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|||+|.
T Consensus 83 iDiLVnnAg~ 92 (251)
T d1zk4a1 83 VSTLVNNAGI 92 (251)
T ss_dssp CCEEEECCCC
T ss_pred ceEEEecccc
Confidence 9999999985
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.56 E-value=3.9e-07 Score=72.94 Aligned_cols=101 Identities=23% Similarity=0.328 Sum_probs=69.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHH----HHHHcCCCEEE---eCCCCc----HHHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADVCI---NYKTED----FVARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~----~~~~~g~~~~~---~~~~~~----~~~~~~~~~~~ 206 (274)
.||++||+|++++||.++++.+.+.|++|++++++.+ .++ .+++.+.+... |..+.+ +.+.+.+..+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 95 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG- 95 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC-
Confidence 4899999999999999999999999999999987643 333 33455655443 333322 3333344444
Q ss_pred CCccEEEECCChhh--------------------------HHHhhhccccCCEEEEEecCC
Q 024011 207 KGVDVILDCMGASY--------------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|++++++|... ...++..|.++|+++.++...
T Consensus 96 -~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~ 155 (272)
T d1g0oa_ 96 -KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 155 (272)
T ss_dssp -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred -CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence 4899999998420 123455678888888886543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.56 E-value=6.8e-08 Score=76.54 Aligned_cols=79 Identities=24% Similarity=0.347 Sum_probs=58.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCC--EE--EeCCCCc----HHHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGAD--VC--INYKTED----FVARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~----~~~~~~~~~~~~~~ 209 (274)
.++|||+||++|||.++++.+.+.|+ +|+++.|++++++.+++.... .. +|..+.+ +.+.+.+..+..++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 48999999999999999999999996 788899999998888765432 22 2444432 33344444444469
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 83 dilinnAG~ 91 (250)
T d1yo6a1 83 SLLINNAGV 91 (250)
T ss_dssp CEEEECCCC
T ss_pred EEEEEcCcc
Confidence 999999994
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.55 E-value=1.7e-07 Score=75.16 Aligned_cols=78 Identities=27% Similarity=0.434 Sum_probs=57.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC---C---EEEeCCCCcH----HHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---D---VCINYKTEDF----VARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~---~---~~~~~~~~~~----~~~~~~~~ 204 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+. . ...|..+.+. .+.+.+..
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999998876654 3332 1 1234444333 33334444
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|||+|.
T Consensus 84 g--~iDilvnnAG~ 95 (272)
T d1xkqa_ 84 G--KIDVLVNNAGA 95 (272)
T ss_dssp S--CCCEEEECCCC
T ss_pred C--CceEEEeCCcc
Confidence 4 49999999984
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.54 E-value=2.5e-07 Score=73.02 Aligned_cols=78 Identities=19% Similarity=0.287 Sum_probs=57.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH--HHHHHcCCCEE---EeCCCCcHH----HHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGADVC---INYKTEDFV----ARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~ 209 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++. +.+++.+.... .|..+.+.. +.+.+..+ ++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G--~i 81 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG--RC 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--CC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC--CC
Confidence 589999999999999999999999999999999876542 34456665433 244443333 33334444 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|||+|.
T Consensus 82 DilVnnAG~ 90 (247)
T d2ew8a1 82 DILVNNAGI 90 (247)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999995
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.54 E-value=3e-07 Score=73.10 Aligned_cols=79 Identities=20% Similarity=0.321 Sum_probs=57.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+ .+..+ .
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-~ 85 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH-G 85 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT-T
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC-C
Confidence 5899999999999999999999999999999999998876543 3443322 344443333333 22222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 86 ~idilvnnAG~ 96 (259)
T d2ae2a_ 86 KLNILVNNAGI 96 (259)
T ss_dssp CCCEEEECCCC
T ss_pred CceEEEECCce
Confidence 48999999994
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.53 E-value=3.4e-07 Score=72.81 Aligned_cols=102 Identities=24% Similarity=0.314 Sum_probs=68.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHH----HHHcCCCEE-E--eCCCC----cHHHHHHHHh
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGADVC-I--NYKTE----DFVARVKEET 204 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~----~~~~g~~~~-~--~~~~~----~~~~~~~~~~ 204 (274)
+-.||++||+|+++|+|.++++.+.+.|++|+++.++ ++..+. +++.|.... + |..+. ++.+.+.+..
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 3469999999999999999999999999999987654 443333 345665543 2 33332 2333444444
Q ss_pred CCCCccEEEECCChhh--------------------------HHHhhhccccCCEEEEEecC
Q 024011 205 GGKGVDVILDCMGASY--------------------------FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~ 240 (274)
+ ++|++|+|+|... ...++..|+++|+++.+...
T Consensus 83 g--~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~ 142 (259)
T d1ja9a_ 83 G--GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI 142 (259)
T ss_dssp S--CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred C--CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence 4 4999999999521 12345557777877777554
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.53 E-value=1.2e-07 Score=75.65 Aligned_cols=78 Identities=21% Similarity=0.328 Sum_probs=57.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC----EE--EeCCCCcHH----HHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VC--INYKTEDFV----ARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~----~~--~~~~~~~~~----~~~~~~~ 204 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.. .. .|..+.+.. +.+.+..
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999998876553 33321 12 244443333 3333444
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++|||+|.
T Consensus 84 g--~iDilvnnAG~ 95 (264)
T d1spxa_ 84 G--KLDILVNNAGA 95 (264)
T ss_dssp S--CCCEEEECCC-
T ss_pred C--CCCEeeccccc
Confidence 4 49999999984
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.53 E-value=2.3e-07 Score=74.44 Aligned_cols=78 Identities=24% Similarity=0.403 Sum_probs=57.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC----EE--EeCCCCcH----HHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VC--INYKTEDF----VARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~----~~--~~~~~~~~----~~~~~~~~ 204 (274)
.||+++|+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.. .. .|..+.+. .+.+.+.+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999999999999998876553 33321 12 34444333 33334444
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|++++|+|.
T Consensus 83 G--~iDilVnnAG~ 94 (274)
T d1xhla_ 83 G--KIDILVNNAGA 94 (274)
T ss_dssp S--CCCEEEECCCC
T ss_pred C--CceEEEeeccc
Confidence 4 49999999984
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.51 E-value=2.7e-07 Score=72.96 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=57.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.+|++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+.. +++.+.++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g-- 86 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK-- 86 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC--
Confidence 4899999999999999999999999999999999988875543 4454332 244443333 33333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 ~iDilvnnag~ 97 (251)
T d2c07a1 87 NVDILVNNAGI 97 (251)
T ss_dssp CCCEEEECCCC
T ss_pred Cceeeeecccc
Confidence 49999999985
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.51 E-value=2.7e-07 Score=73.26 Aligned_cols=79 Identities=24% Similarity=0.415 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~----~~~~~~~~ 207 (274)
+||++||+|+++++|.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+..++ +.+..+ .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-g 83 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD-G 83 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT-S
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC-C
Confidence 689999999999999999999999999999999998876554 34554432 34444433333 333332 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++++|+|.
T Consensus 84 ~idilinnag~ 94 (258)
T d1ae1a_ 84 KLNILVNNAGV 94 (258)
T ss_dssp CCCEEEECCCC
T ss_pred CcEEEeccccc
Confidence 48999999985
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.50 E-value=2.7e-07 Score=73.42 Aligned_cols=78 Identities=23% Similarity=0.324 Sum_probs=56.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hH----HHHHHcCCCEE---EeCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KL----AVCKDLGADVC---INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~----~~~~~~g~~~~---~~~~~~~~~----~~~~~~~~~ 206 (274)
.||+++|+|++++||.++++.+.+.|++|++++|+.+ .+ +++++.+.... .|..+.+.. +.+.+..+
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G- 84 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG- 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC-
Confidence 5899999999999999999999999999999998854 33 33445565433 244443333 33334443
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 85 -~iDiLVnnAG~ 95 (261)
T d1geea_ 85 -KLDVMINNAGL 95 (261)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEeecccee
Confidence 49999999985
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.49 E-value=2.9e-07 Score=73.13 Aligned_cols=79 Identities=24% Similarity=0.351 Sum_probs=57.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
+||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+ .
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-g 85 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG-G 85 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT-T
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC-C
Confidence 5899999999999999999999999999999999998876553 3333322 2444433333 3333332 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|+++||+|.
T Consensus 86 ~idilvnnAG~ 96 (259)
T d1xq1a_ 86 KLDILINNLGA 96 (259)
T ss_dssp CCSEEEEECCC
T ss_pred Ccccccccccc
Confidence 48999999985
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.49 E-value=4.3e-07 Score=72.01 Aligned_cols=76 Identities=22% Similarity=0.351 Sum_probs=55.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcH----HHHHHHHhCCCCc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDF----VARVKEETGGKGV 209 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~----~~~~~~~~~~~~~ 209 (274)
|.+||+|+++|+|.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+. .+.+.+.++ ++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i 79 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG--GF 79 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT--CC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC--Cc
Confidence 5679999999999999999999999999999999887554 34554432 24444333 333333443 49
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|||+|.
T Consensus 80 DilVnnAG~ 88 (255)
T d1gega_ 80 DVIVNNAGV 88 (255)
T ss_dssp CEEEECCCC
T ss_pred cEEEecccc
Confidence 999999984
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.48 E-value=2.4e-07 Score=73.71 Aligned_cols=78 Identities=21% Similarity=0.349 Sum_probs=57.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-----HHcCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----KDLGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-----~~~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.+ ++.+.... .|..+.+..+ .+.+..+
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 86 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG- 86 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC-
Confidence 589999999999999999999999999999999998876443 23454432 3444443333 3333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 -~iDilVnnAg~ 97 (260)
T d1h5qa_ 87 -PISGLIANAGV 97 (260)
T ss_dssp -SEEEEEECCCC
T ss_pred -CCcEecccccc
Confidence 49999999984
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=5.2e-07 Score=73.12 Aligned_cols=79 Identities=24% Similarity=0.372 Sum_probs=57.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H----c----CCCEE---EeCCCCcH----HHHHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----L----GADVC---INYKTEDF----VARVK 201 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~----g~~~~---~~~~~~~~----~~~~~ 201 (274)
-+|+++||+|+++|||.++++.+.+.|++|++++|++++++.+. + + +.... .|..+.+. .+.+.
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999988775442 1 1 22222 24444332 33333
Q ss_pred HHhCCCCccEEEECCCh
Q 024011 202 EETGGKGVDVILDCMGA 218 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~ 218 (274)
+..+ ++|++|||+|.
T Consensus 90 ~~~G--~iDiLVnnAg~ 104 (297)
T d1yxma1 90 DTFG--KINFLVNNGGG 104 (297)
T ss_dssp HHHS--CCCEEEECCCC
T ss_pred HHhC--CeEEEEeeccc
Confidence 4444 49999999984
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.43 E-value=6.7e-07 Score=72.35 Aligned_cols=78 Identities=15% Similarity=0.334 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-----HcCCCEE-E--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADVC-I--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~g~~~~-~--~~~~~~~~~----~~~~~~~~ 206 (274)
.||++||+|+++|||.++++.+.+.|++|++++|++++++.+. +.+.... + |..+.+..+ .+.+..
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-- 101 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-- 101 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT--
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc--
Confidence 5899999999999999999999999999999999988765432 3343332 2 333333222 222333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++++|+|.
T Consensus 102 g~iDilvnnAg~ 113 (294)
T d1w6ua_ 102 GHPNIVINNAAG 113 (294)
T ss_dssp CSCSEEEECCCC
T ss_pred cccchhhhhhhh
Confidence 359999999984
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.40 E-value=3e-07 Score=74.18 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=50.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEE---ecChhhHH----HHHHc---CCCE-E--EeCCCCcHHHHHHHHhCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT---AGSEEKLA----VCKDL---GADV-C--INYKTEDFVARVKEETGGK 207 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~---~~~~~~~~----~~~~~---g~~~-~--~~~~~~~~~~~~~~~~~~~ 207 (274)
+.+||+||++|||.++++.+.+.|++++.+ .++.+..+ .++++ +... . .|..+.+..+.+.+.....
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 567899999999999999999999975554 44433322 22332 2222 2 3555544445555444445
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++++|+|.
T Consensus 83 ~idilvnnag~ 93 (285)
T d1jtva_ 83 RVDVLVCNAGL 93 (285)
T ss_dssp CCSEEEECCCC
T ss_pred chhhhhhcccc
Confidence 69999999984
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.34 E-value=2e-06 Score=67.58 Aligned_cols=99 Identities=21% Similarity=0.259 Sum_probs=65.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCEE---EeCCCCcHH----HHHHHHhCCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC---INYKTEDFV----ARVKEETGGKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~~---~~~~~~~~~----~~~~~~~~~~~ 208 (274)
..+||+|+++|+|.++++.+.+.|++|++.+ |+++.++.+ ++.+.... .|..+.+.. +.+.+..+ +
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG--T 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS--C
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC--C
Confidence 4689999999999999999999999998875 455555444 34554322 244443333 33333333 4
Q ss_pred ccEEEECCChhh-----------H---------------HHhhhcc--ccCCEEEEEecCC
Q 024011 209 VDVILDCMGASY-----------F---------------QRNLGSL--NIDGRLFIIGTQG 241 (274)
Q Consensus 209 ~d~vi~~~g~~~-----------~---------------~~~~~~l--~~~g~~v~~g~~~ 241 (274)
+|++|||+|... + ..++..| +.+|+|+.+++..
T Consensus 80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~ 140 (244)
T d1edoa_ 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV 140 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChh
Confidence 999999998420 1 2334445 4578999998765
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.32 E-value=2.9e-07 Score=72.71 Aligned_cols=78 Identities=19% Similarity=0.303 Sum_probs=54.1
Q ss_pred CEEEEecCCchHHHHHHHHHH---HcCCeEEEEecChhhHHHHHH---cCCCE-E--EeCCCCcHHHHHHH----HhCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGK---CQGVRVFVTAGSEEKLAVCKD---LGADV-C--INYKTEDFVARVKE----ETGGK 207 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~---~~g~~v~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~~~----~~~~~ 207 (274)
++|||+|+++|||.++++.+. +.|++|++++|++++++.+++ .+... . +|..+.+..+.+.+ .....
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 82 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ 82 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence 689999999999999998775 468999999999887655542 22222 2 35444443333333 22334
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 83 ~iDiLvnNAg~ 93 (248)
T d1snya_ 83 GLNVLFNNAGI 93 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CcceEEeeccc
Confidence 59999999984
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.23 E-value=5.3e-06 Score=61.14 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=84.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC----C----------------CCcHHHH
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY----K----------------TEDFVAR 199 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~----~----------------~~~~~~~ 199 (274)
.-+|+|+|+ |..|..+++.|+.+|++|.+.+.+.++++.+++++...+... . .....+.
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~ 107 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 107 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence 356889997 999999999999999999999999999999998876543100 0 0112333
Q ss_pred HHHHhCCCCccEEEECCChh-------hHHHhhhccccCCEEEEEecCCCCccccch--hhHhhcceEEEEeec
Q 024011 200 VKEETGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGTQGGAKTELNI--TSLFAKRLTVQGIVP 264 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~--~~~~~~~~~i~g~~~ 264 (274)
+.+.... .|+||-++=.+ ..+..++.|+++..+++++...+..++... ..+..++..+.|..+
T Consensus 108 l~~~l~~--aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~Ets~~~~~~~~~gV~~~gv~N 179 (183)
T d1l7da1 108 VLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN 179 (183)
T ss_dssp HHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS
T ss_pred HHHHHHh--hhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccccCcCCCEEEECCEEEEeeCC
Confidence 4444433 89999876421 246788999999999999877655443221 123344555555443
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.15 E-value=7e-06 Score=64.83 Aligned_cols=83 Identities=18% Similarity=0.310 Sum_probs=57.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhh-------HHHHHHcCCCEE---EeCCCCcHHHHHHHHh
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-------LAVCKDLGADVC---INYKTEDFVARVKEET 204 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~-------~~~~~~~g~~~~---~~~~~~~~~~~~~~~~ 204 (274)
..+|+.++||+|+++|||.++++.+.+.|+ +|+++.|+... .+++++.|.... .|..+.+....+.+..
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i 84 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 84 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence 578999999999999999999999999999 58888876432 233345665433 2444444444444433
Q ss_pred C-CCCccEEEECCCh
Q 024011 205 G-GKGVDVILDCMGA 218 (274)
Q Consensus 205 ~-~~~~d~vi~~~g~ 218 (274)
. ..++|.+++++|.
T Consensus 85 ~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 85 GDDVPLSAVFHAAAT 99 (259)
T ss_dssp CTTSCEEEEEECCCC
T ss_pred ccccccccccccccc
Confidence 2 2358999999984
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.14 E-value=8.9e-06 Score=59.07 Aligned_cols=99 Identities=13% Similarity=0.171 Sum_probs=73.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
..+++|.|+ |..|+.+++.++.+|++|.+.+.+.+++++++..... .....+.+.+ .+... ..|+||.++=
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l----~~~~~--~aDivI~aal 104 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEI----ETAVA--EADLLIGAVL 104 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHH----HHHHH--TCSEEEECCC
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhH----HHhhc--cCcEEEEeee
Confidence 467899997 9999999999999999999999999999888764322 2222222223 33222 2899999874
Q ss_pred hh-------hHHHhhhccccCCEEEEEecCCCCcc
Q 024011 218 AS-------YFQRNLGSLNIDGRLFIIGTQGGAKT 245 (274)
Q Consensus 218 ~~-------~~~~~~~~l~~~g~~v~~g~~~~~~~ 245 (274)
.+ .....++.|+++..++++....+..+
T Consensus 105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~ 139 (168)
T d1pjca1 105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCV 139 (168)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSB
T ss_pred cCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcc
Confidence 21 24678899999999999987765544
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.12 E-value=6.9e-06 Score=65.41 Aligned_cols=78 Identities=19% Similarity=0.147 Sum_probs=53.1
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhHHHH---HHcC-CCEEE--eCCCCc----HHHHHHHHhCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDLG-ADVCI--NYKTED----FVARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~~g-~~~~~--~~~~~~----~~~~~~~~~~~ 206 (274)
+||++||+|++| |||.++++.+.+.|++|++++|+++..+.+ .+.+ ...+. |...+. ..+++.+..+
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g- 82 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG- 82 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC-
Confidence 599999999865 899999999999999999999987543333 2222 22222 333322 2233333433
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.+|++++|+|.
T Consensus 83 -~id~lV~nag~ 93 (274)
T d2pd4a1 83 -SLDFIVHSVAF 93 (274)
T ss_dssp -CEEEEEECCCC
T ss_pred -CCCeEEeeccc
Confidence 49999999984
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.07 E-value=4.5e-06 Score=66.05 Aligned_cols=80 Identities=20% Similarity=0.160 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHH---cCCeEEEEecChhhHHHHHH----cC-CCEE----EeCCCCcHHHHHHHH---
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCKD----LG-ADVC----INYKTEDFVARVKEE--- 203 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~---~g~~v~~~~~~~~~~~~~~~----~g-~~~~----~~~~~~~~~~~~~~~--- 203 (274)
.|+.++|+|+++|||.++++.+.+ .|++|++++|++++++.+.+ .+ ...+ .|..+.+..+.+.+.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 588999999999999999988764 69999999999998866532 22 2222 244444333333321
Q ss_pred -h--CCCCccEEEECCCh
Q 024011 204 -T--GGKGVDVILDCMGA 218 (274)
Q Consensus 204 -~--~~~~~d~vi~~~g~ 218 (274)
. .....|++++|+|.
T Consensus 85 ~~~~~~~~~~~lvnnag~ 102 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred hhhhccCceEEEEecccc
Confidence 1 12347899999873
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=1.2e-05 Score=63.05 Aligned_cols=48 Identities=21% Similarity=0.256 Sum_probs=42.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD 186 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~ 186 (274)
+||++||+|+++|+|.++++.+.+.|++|++++|++++++.+. +++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence 5999999999999999999999999999999999998876554 55543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.05 E-value=1.3e-05 Score=63.32 Aligned_cols=75 Identities=20% Similarity=0.222 Sum_probs=50.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HH----HHH-cCCCEEEe---C-CCC---c----HHHHHHHHh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AV----CKD-LGADVCIN---Y-KTE---D----FVARVKEET 204 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~----~~~-~g~~~~~~---~-~~~---~----~~~~~~~~~ 204 (274)
++||+|+++|+|.++++.+.+.|++|++++|+.++. +. +.+ .+...... . +.. + +.+.+.+..
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999886643 22 222 23333321 1 111 1 122333344
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
+ ++|+++||+|.
T Consensus 83 g--~iDilvnnAG~ 94 (266)
T d1mxha_ 83 G--RCDVLVNNASA 94 (266)
T ss_dssp S--CCCEEEECCCC
T ss_pred C--CCCEEEECCcc
Confidence 3 49999999984
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.97 E-value=5.4e-06 Score=63.09 Aligned_cols=97 Identities=12% Similarity=0.168 Sum_probs=66.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.++|+|+||+|.+|..++..+.+.|++|.+++|+.+++......+.. ++..+..+ .+.+.+... +.|+||+++|..
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d-~~~l~~al~--~~d~vi~~~g~~ 78 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQ-AADVDKTVA--GQDAVIVLLGTR 78 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSE-EEESCTTS-HHHHHHHHT--TCSEEEECCCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccc-cccccccc-hhhHHHHhc--CCCEEEEEeccC
Confidence 47899999999999999999999999999999998876544333333 33344333 234444454 489999998842
Q ss_pred h-----------HHHhhhccccC--CEEEEEecC
Q 024011 220 Y-----------FQRNLGSLNID--GRLFIIGTQ 240 (274)
Q Consensus 220 ~-----------~~~~~~~l~~~--g~~v~~g~~ 240 (274)
. ....++.++.. .+++.++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~ 112 (205)
T d1hdoa_ 79 NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (205)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence 1 22344555443 378877654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=2.4e-05 Score=61.57 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=54.5
Q ss_pred CCCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEEeCCCCc---HHHHHHHHh-CCC
Q 024011 138 SPGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTED---FVARVKEET-GGK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~---~~~~~~~~~-~~~ 207 (274)
-.||++||+|+++ |+|.++++.+.+.|++|+++.|+++..+.+. ..+.......+..+ ......+.. ...
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 3689999999988 8999999999999999999999877554433 34444443333222 222222222 223
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|+++++++.
T Consensus 83 ~~d~~v~~a~~ 93 (258)
T d1qsga_ 83 KFDGFVHSIGF 93 (258)
T ss_dssp SEEEEEECCCC
T ss_pred ccceEEEeecc
Confidence 48999999864
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.87 E-value=2.5e-05 Score=62.27 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=30.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.+||+|+++|+|.++++.+.+.|++|++++++.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~ 37 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA 37 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence 4799999999999999999999999998876543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=6.3e-05 Score=55.23 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=65.7
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c---CCCEEEeCCCCcHHHHHHHHh
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L---GADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~~~~~~~ 204 (274)
.+|++..-..+|++++|.|+ ||.+.+++..+...|++++++.|+.++.+.+.+ + +.....+.+ + .
T Consensus 7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--~--------~ 75 (170)
T d1nyta1 7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--E--------L 75 (170)
T ss_dssp HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--G--------G
T ss_pred HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--c--------c
Confidence 34555544567999999997 999999999999999999999999998776653 2 222222111 1 1
Q ss_pred CCCCccEEEECCChhhH----HHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGASYF----QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~~----~~~~~~l~~~g~~v~~g~ 239 (274)
....+|++|||+..... ..-.+.+++...++++-.
T Consensus 76 ~~~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY 114 (170)
T d1nyta1 76 EGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFY 114 (170)
T ss_dssp TTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred cccccceeecccccCcccCCCCCcHHHhccCcEEEEeec
Confidence 12358999999854221 112344666666666644
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.77 E-value=3.1e-05 Score=62.16 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=34.1
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
.||++||+|++| |||.++++.+.+.|++|+++.|+++.
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL 46 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence 589999999876 99999999999999999999987653
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.77 E-value=0.00013 Score=53.53 Aligned_cols=96 Identities=10% Similarity=0.046 Sum_probs=61.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+++|+|.|+ |.+|..+++.+...|++|++++|+.++.+.+.+....................... ..|.++.+....
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~~~ 78 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPYT 78 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECSCGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh--ccceeEeeccch
Confidence 689999997 99999999999999999999999999998887544333332222222222333332 267888776654
Q ss_pred hH-HHhhhccccCCEEEEEe
Q 024011 220 YF-QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 220 ~~-~~~~~~l~~~g~~v~~g 238 (274)
.. .....+.+.+-.++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~ 98 (182)
T d1e5qa1 79 FHATVIKSAIRQKKHVVTTS 98 (182)
T ss_dssp GHHHHHHHHHHHTCEEECSS
T ss_pred hhhHHHHHHHhhccceeecc
Confidence 32 22333444444555443
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.76 E-value=5.5e-05 Score=59.68 Aligned_cols=82 Identities=24% Similarity=0.362 Sum_probs=56.0
Q ss_pred CCCCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecChhhH-HHHH-HcCCC---EEEeCCCC----cHHHHHHHHhC
Q 024011 137 LSPGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCK-DLGAD---VCINYKTE----DFVARVKEETG 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~-~~g~~---~~~~~~~~----~~~~~~~~~~~ 205 (274)
.-.||++||+|+ ++|+|.++++.+.+.|++|+++.++++++ +.+. +++.. ...|..++ +..+.+.+..+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 346899999995 45799999999999999999999988765 3333 34432 22233332 23344444443
Q ss_pred C-CCccEEEECCCh
Q 024011 206 G-KGVDVILDCMGA 218 (274)
Q Consensus 206 ~-~~~d~vi~~~g~ 218 (274)
. ..+|++++|+|.
T Consensus 83 ~~~~ld~~i~~ag~ 96 (268)
T d2h7ma1 83 AGNKLDGVVHSIGF 96 (268)
T ss_dssp TTCCEEEEEECCCC
T ss_pred cCCCcceeeecccc
Confidence 3 348999999983
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.73 E-value=8.3e-05 Score=54.39 Aligned_cols=71 Identities=18% Similarity=0.273 Sum_probs=53.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+.-.+.++++|+|.|+ ||.+.+++..++..|+ ++.++.|+.++.+.+.+ ++... ++... ...+|
T Consensus 10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~------------~~~~D 75 (167)
T d1npya1 10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE------------NQQAD 75 (167)
T ss_dssp HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT------------TCCCS
T ss_pred HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc------------ccchh
Confidence 4445667899999997 9999999999999998 89999999998877654 44332 22111 12489
Q ss_pred EEEECCC
Q 024011 211 VILDCMG 217 (274)
Q Consensus 211 ~vi~~~g 217 (274)
++|||+.
T Consensus 76 liINaTp 82 (167)
T d1npya1 76 ILVNVTS 82 (167)
T ss_dssp EEEECSS
T ss_pred hheeccc
Confidence 9999875
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.72 E-value=7e-05 Score=61.10 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=33.2
Q ss_pred CCEEEEec--CCchHHHHHHHHHHHcCCeEEEEecChhhH
Q 024011 140 GESFLVHG--GSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177 (274)
Q Consensus 140 g~~vlI~G--a~g~iG~~~~~~~~~~g~~v~~~~~~~~~~ 177 (274)
+|.+||+| +++|||.++++.+.+.|++|+++.++....
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~ 41 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN 41 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence 68899999 456999999999999999999998776644
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.60 E-value=0.0003 Score=50.83 Aligned_cols=72 Identities=22% Similarity=0.373 Sum_probs=53.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHH-HHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.++++||.|+ |.+|.++++.+...|+ +++++.|+.++.+. +++++... .+ -+++.+.+. .+|+||.|
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~--~~~~~~~l~------~~Divi~a 91 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VR--FDELVDHLA------RSDVVVSA 91 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CC--GGGHHHHHH------TCSEEEEC
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-cc--chhHHHHhc------cCCEEEEe
Confidence 46889999997 9999999999999998 69999999887654 45666432 22 123333332 38999999
Q ss_pred CChh
Q 024011 216 MGAS 219 (274)
Q Consensus 216 ~g~~ 219 (274)
++.+
T Consensus 92 tss~ 95 (159)
T d1gpja2 92 TAAP 95 (159)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 9864
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.59 E-value=0.0004 Score=54.63 Aligned_cols=100 Identities=22% Similarity=0.339 Sum_probs=70.2
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcCC--CEEEeCCCCcHHHHHHHH
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGA--DVCINYKTEDFVARVKEE 203 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~~~~ 203 (274)
....++++|++||=.|+ |.|..+..+++..| .+|+.++.+++.++.++ ..+. ...+... +. ...
T Consensus 96 i~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~--d~----~~~ 167 (266)
T d1o54a_ 96 AMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR--DI----SEG 167 (266)
T ss_dssp HHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC--CG----GGC
T ss_pred HHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec--cc----ccc
Confidence 36778999999999997 44788888888764 69999999999887765 3443 2222222 11 112
Q ss_pred hCCCCccEEEECCChh--hHHHhhhccccCCEEEEEec
Q 024011 204 TGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (274)
.....+|.|+.-...+ .+..+.+.|+++|++++...
T Consensus 168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P 205 (266)
T d1o54a_ 168 FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 205 (266)
T ss_dssp CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEeC
Confidence 3334588887766653 37889999999999997653
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.58 E-value=7.3e-05 Score=56.97 Aligned_cols=110 Identities=21% Similarity=0.193 Sum_probs=73.3
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEEeCCCCc
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTED 195 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~ 195 (274)
+..|...|.. .+...+++|++||..|+ |.|+.++.+++..|.+|+.++++++-.+.++ +++.+.+.....+.
T Consensus 61 is~P~~~a~m--l~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~ 136 (215)
T d1jg1a_ 61 VSAPHMVAIM--LEIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG 136 (215)
T ss_dssp ECCHHHHHHH--HHHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred hhhhhhHHHH--HHhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc
Confidence 4445555542 35678999999999995 5688888888877888999998877655443 56654332111111
Q ss_pred HHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 196 FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 196 ~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
. ........||.++-+++... ....++.|+++|+++..
T Consensus 137 ~----~g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 137 S----KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp G----GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred c----cCCcccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence 0 00112245999988777654 46678999999999875
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.54 E-value=0.00015 Score=56.63 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=32.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
|.+||+|+++|||.++++.+.+.|++|++++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 57899999999999999999999999999998754
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.46 E-value=0.00014 Score=55.73 Aligned_cols=73 Identities=19% Similarity=0.121 Sum_probs=49.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+|||+|++|.+|..+++.+.+.|. .|+...|++++.+.+.. +... +..+..+ .+.+.+... ++|.|+++++.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~-~~~d~~~-~~~~~~~~~--~~d~vi~~a~~ 78 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADV-FIGDITD-ADSINPAFQ--GIDALVILTSA 78 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTE-EECCTTS-HHHHHHHHT--TCSEEEECCCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEE-EEeeecc-ccccccccc--cceeeEEEEee
Confidence 6899999999999999999999886 56667788776554432 2222 2222222 223344443 48999998864
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.45 E-value=0.00029 Score=51.91 Aligned_cols=89 Identities=17% Similarity=0.101 Sum_probs=60.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEe--------CC--CCcHHHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN--------YK--TEDFVARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~--------~~--~~~~~~~~~~~~~~~~~ 209 (274)
.+++.|.|+ |.+|.+++..+.+.|++|.+++|++++.+.+++.+...... .. ..+..+ ... ..
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~~--~a 73 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL----AVK--DA 73 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH----HHT--TC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHh----Hhc--CC
Confidence 378999997 99999999999999999999999999988887654322110 00 112222 222 38
Q ss_pred cEEEECCChhhHHHh----hhccccCCEEE
Q 024011 210 DVILDCMGASYFQRN----LGSLNIDGRLF 235 (274)
Q Consensus 210 d~vi~~~g~~~~~~~----~~~l~~~g~~v 235 (274)
|++|-+......... ...+.++-.++
T Consensus 74 D~iii~v~~~~~~~~~~~i~~~l~~~~~iv 103 (184)
T d1bg6a2 74 DVILIVVPAIHHASIAANIASYISEGQLII 103 (184)
T ss_dssp SEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred CEEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence 999999886544443 44455554444
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.45 E-value=0.00046 Score=55.00 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=69.8
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHHH
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
...+.+..++++|++||=+|+ |.|..+..++++.|++|+.++.++++.+.++ +.+....+.....++ .
T Consensus 50 ~~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~------~ 121 (291)
T d1kpia_ 50 RKLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW------E 121 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG------G
T ss_pred HHHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc------c
Confidence 334557789999999999996 6778888999999999999999999876654 344322221111121 1
Q ss_pred hCCCCccEEEECCCh----------------hhHHHhhhccccCCEEEEEe
Q 024011 204 TGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g 238 (274)
.....||.|+..-.. ..+..+.+.|+|+|++++-.
T Consensus 122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 122459988753222 13566788999999998643
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.44 E-value=0.00057 Score=49.95 Aligned_cols=99 Identities=10% Similarity=0.125 Sum_probs=63.4
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c---CCCEEEeCCCCcHHHHHHHHhC
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L---GADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
++.+.....++++++|.|+ ||.+.+++..+...+.+++++.|+.++.+.+.+ + +.......+. ..
T Consensus 8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----------~~ 76 (171)
T d1p77a1 8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----------IP 76 (171)
T ss_dssp HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------CC
T ss_pred HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc----------cc
Confidence 3444434457899999997 899999999888878899999999988766642 2 2222222111 11
Q ss_pred CCCccEEEECCChhh----HHHhhhccccCCEEEEEec
Q 024011 206 GKGVDVILDCMGASY----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~----~~~~~~~l~~~g~~v~~g~ 239 (274)
-..+|++|||+.... .....+.+++...++++..
T Consensus 77 ~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy 114 (171)
T d1p77a1 77 LQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQY 114 (171)
T ss_dssp CSCCSEEEECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred ccccceeeecccccccccccchhhhhhcccceeeeeec
Confidence 235899999987432 1112334556666776654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.39 E-value=0.0015 Score=45.27 Aligned_cols=75 Identities=13% Similarity=0.184 Sum_probs=55.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+|+|.|+ |.+|..+++.+...|.+|++++.++++.+.+.+ ++. .++..+..+. ...+..+-...|.++-+...+.
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~-~vi~Gd~~~~--~~l~~~~i~~a~~vv~~t~~d~ 77 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKI--KTLEDAGIEDADMYIAVTGKEE 77 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSH--HHHHHTTTTTCSEEEECCSCHH
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhh-hhccCcccch--hhhhhcChhhhhhhcccCCcHH
Confidence 6899997 999999999999999999999999999888765 454 3444443332 2233333345899998887654
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.35 E-value=0.00014 Score=57.96 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=74.0
Q ss_pred CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC
Q 024011 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD 186 (274)
Q Consensus 111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~ 186 (274)
+.++++|. ......+.++.++++|++||=+|+ |.|..+..+++..|++|+.++.++++.+.+++ .+-.
T Consensus 40 ~~tL~eAQ------~~k~~~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~ 111 (285)
T d1kpga_ 40 DMTLQEAQ------IAKIDLALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL 111 (285)
T ss_dssp TCCHHHHH------HHHHHHHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC
T ss_pred CCCHHHHH------HHHHHHHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhh
Confidence 34556553 222334557789999999999996 67899999999999999999999998877653 2211
Q ss_pred EEEeCCCCcHHHHHHHHhCCCCccEEEEC-----CChh----hHHHhhhccccCCEEEEEe
Q 024011 187 VCINYKTEDFVARVKEETGGKGVDVILDC-----MGAS----YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~-----~g~~----~~~~~~~~l~~~g~~v~~g 238 (274)
.-+.....++ .+ . ...+|.|+.. .+.. .+..+.+.|+++|++++-.
T Consensus 112 ~~v~~~~~d~----~~-~-~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~ 166 (285)
T d1kpga_ 112 RSKRVLLAGW----EQ-F-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 166 (285)
T ss_dssp SCEEEEESCG----GG-C-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhhHHHHhhh----hc-c-cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence 1111111121 11 1 2358877652 2221 2566778999999998643
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.34 E-value=0.0019 Score=46.62 Aligned_cols=85 Identities=11% Similarity=0.019 Sum_probs=58.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC-CEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+|.|.|. |.+|...++.+++.|.+|++.+|+++.++.+++.+. +...+. .+ .. ...|+||-++-...
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~-~~--------~~--~~~DiIilavp~~~ 69 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD-LS--------LL--QTAKIIFLCTPIQL 69 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC-GG--------GG--TTCSEEEECSCHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeee-cc--------cc--cccccccccCcHhh
Confidence 5889996 999999999999999999999999999988888774 333221 11 11 23788888876543
Q ss_pred H----HHhhhccccCCEEEEEe
Q 024011 221 F----QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 221 ~----~~~~~~l~~~g~~v~~g 238 (274)
. +.....++++-.++.++
T Consensus 70 ~~~vl~~l~~~l~~~~iv~~~~ 91 (165)
T d2f1ka2 70 ILPTLEKLIPHLSPTAIVTDVA 91 (165)
T ss_dssp HHHHHHHHGGGSCTTCEEEECC
T ss_pred hhhhhhhhhhhcccccceeecc
Confidence 3 33334445555555554
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.34 E-value=0.0001 Score=57.04 Aligned_cols=37 Identities=41% Similarity=0.456 Sum_probs=34.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
.|++||+|+++|||.++++.+.+.|++|++++|+++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 4789999999999999999999999999999988764
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.31 E-value=0.00016 Score=57.55 Aligned_cols=113 Identities=21% Similarity=0.309 Sum_probs=72.3
Q ss_pred CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC
Q 024011 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD 186 (274)
Q Consensus 111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~ 186 (274)
+.++++|- ...+..+.+..++++|++||=+|+ |.|..+..+++..|++|+.++.+++..+.+++ .+..
T Consensus 30 ~~tL~~AQ------~~k~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~ 101 (280)
T d2fk8a1 30 ELTLEEAQ------YAKVDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN 101 (280)
T ss_dssp TCCHHHHH------HHHHHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred CCCHHHHH------HHHHHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccc
Confidence 34556653 223344557788999999999997 45667777888889999999999998877653 3321
Q ss_pred EEEeCCCCcHHHHHHHHhCCCCccEEEEC-----CChh----hHHHhhhccccCCEEEEE
Q 024011 187 VCINYKTEDFVARVKEETGGKGVDVILDC-----MGAS----YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~-----~g~~----~~~~~~~~l~~~g~~v~~ 237 (274)
..+.....+. .+. ...+|.|+.. .+.. .+..+.+.|+|+|++++-
T Consensus 102 ~~~~~~~~d~----~~~--~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~ 155 (280)
T d2fk8a1 102 RSRQVLLQGW----EDF--AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 155 (280)
T ss_dssp SCEEEEESCG----GGC--CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred cchhhhhhhh----hhh--ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence 1111111111 111 2358888643 2222 256778899999999874
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.23 E-value=0.001 Score=50.39 Aligned_cols=97 Identities=23% Similarity=0.168 Sum_probs=66.8
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cCCCEE--EeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADVC--INYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~~ 204 (274)
+...+++|++||-.|+ |.|..++.+++..| .+|+.++.+++.++.+++ .+...+ ...+..+. ..
T Consensus 69 ~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~------~~ 140 (213)
T d1dl5a1 69 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG------VP 140 (213)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC------CG
T ss_pred HhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc------cc
Confidence 6678999999999996 44888888888765 489999999887776653 333222 22121110 11
Q ss_pred CCCCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
....||.|+.+.+... .+..++.|+++|+++..
T Consensus 141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 174 (213)
T ss_dssp GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred cccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence 1235999998877544 46678999999999874
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=97.22 E-value=0.00061 Score=54.95 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=47.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecC--hh---hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EE---KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~--~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+|||+||+|-+|..+++.+.+.|++|+++++- .. .+..+.....-..+..+-.+ .+.+.+...+..+|+||+++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~-~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-KNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCC-HHHHHHHHHhcCCceEEeec
Confidence 69999999999999999999999999998631 12 23333343333333333222 12223322223479999998
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
+.
T Consensus 81 a~ 82 (338)
T d1orra_ 81 GQ 82 (338)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.22 E-value=0.0012 Score=48.69 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=64.3
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH----HcC---CCE--EEeCCCCcHHHH
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK----DLG---ADV--CINYKTEDFVAR 199 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~----~~g---~~~--~~~~~~~~~~~~ 199 (274)
++++...--.+++++|.|+ ||.+.+++..+...|+ +++++.|+.++.+.+. +++ ... ..+..+. +.
T Consensus 8 ~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~ 83 (182)
T d1vi2a1 8 AIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ---QA 83 (182)
T ss_dssp HHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH---HH
T ss_pred HHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc---cc
Confidence 4444332236799999997 8999999999999998 7888899877554332 221 122 2222221 12
Q ss_pred HHHHhCCCCccEEEECCChhh-------HHHhhhccccCCEEEEEecC
Q 024011 200 VKEETGGKGVDVILDCMGASY-------FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~-------~~~~~~~l~~~g~~v~~g~~ 240 (274)
+.+... .+|++||++.... ...-+..++++..++++...
T Consensus 84 ~~~~~~--~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~ 129 (182)
T d1vi2a1 84 FAEALA--SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYN 129 (182)
T ss_dssp HHHHHH--TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCS
T ss_pred hhhhhc--ccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcC
Confidence 222222 3899999986321 11124567778888888643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=97.19 E-value=0.00038 Score=56.75 Aligned_cols=46 Identities=28% Similarity=0.265 Sum_probs=40.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
-+.+|++|||+|++|-+|..+++.+.+.|++|++++|+.++...++
T Consensus 7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~ 52 (342)
T d1y1pa1 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence 4577999999999999999999999999999999999887665543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.18 E-value=0.00039 Score=56.36 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=31.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+++||+||+|-+|..++..|.+.|++|++++|.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 689999999999999999999999999999985
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.0004 Score=53.85 Aligned_cols=101 Identities=21% Similarity=0.153 Sum_probs=69.6
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC--E-EEeCCCCcHHHHHH
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--V-CINYKTEDFVARVK 201 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~ 201 (274)
..+....++++|++||=.|+ |.|..+..++++.|++|+.++.+++.++.+++ .|.. . ....+..+
T Consensus 23 ~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~------ 94 (245)
T d1nkva_ 23 ATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG------ 94 (245)
T ss_dssp HHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT------
T ss_pred HHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh------
Confidence 34557889999999999996 45677778888889999999999988766653 3432 1 22222221
Q ss_pred HHhCCCCccEEEECCCh-------hhHHHhhhccccCCEEEEEe
Q 024011 202 EETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g 238 (274)
......+|.|+-.-.. ..+....+.|+++|+++...
T Consensus 95 -~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~ 137 (245)
T d1nkva_ 95 -YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 137 (245)
T ss_dssp -CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred -ccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence 1223569988754332 23567788999999998764
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.00036 Score=45.45 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=51.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.|++++|.|. |..|+++++++.+.|++|++.+.+... .+.++. +....+...... .+. .+|.++-+.
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~------~~d~vi~SP 72 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-AVERHTGSLNDE---WLM------AADLIVASP 72 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-TSCEEESBCCHH---HHH------HCSEEEECT
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-ccceeecccchh---hhc------cCCEEEECC
Confidence 4789999997 999999999999999999999975442 222222 223333222211 111 279999888
Q ss_pred ChhhHHHhhhcccc
Q 024011 217 GASYFQRNLGSLNI 230 (274)
Q Consensus 217 g~~~~~~~~~~l~~ 230 (274)
|.+.-...++....
T Consensus 73 Gi~~~~~~~~~a~~ 86 (93)
T d2jfga1 73 GIALAHPSLSAAAD 86 (93)
T ss_dssp TSCTTSHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
Confidence 86544444443333
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.14 E-value=0.0089 Score=42.67 Aligned_cols=104 Identities=18% Similarity=0.211 Sum_probs=70.8
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.-.-.||+++|.| .|-+|..+++.++..|++|++++.++-+.-++..-|.... .. .+... ..|+++-
T Consensus 19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~------~~----~~a~~--~adivvt 85 (163)
T d1li4a1 19 DVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT------TM----DEACQ--EGNIFVT 85 (163)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------CH----HHHTT--TCSEEEE
T ss_pred CceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee------eh----hhhhh--hccEEEe
Confidence 3345799999999 6999999999999999999999988765433333343321 11 12222 2699999
Q ss_pred CCChhh--HHHhhhccccCCEEEEEecCCCCccccchhhHhh
Q 024011 215 CMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 254 (274)
Q Consensus 215 ~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 254 (274)
+.|... ..+-++.|+++.-+..+|... .+++...+..
T Consensus 86 aTGn~~vI~~eh~~~MKdgaIL~N~Ghfd---~EId~~~L~~ 124 (163)
T d1li4a1 86 TTGCIDIILGRHFEQMKDDAIVCNIGHFD---VEIDVKWLNE 124 (163)
T ss_dssp CSSCSCSBCHHHHTTCCTTEEEEECSSST---TSBCHHHHHH
T ss_pred cCCCccchhHHHHHhccCCeEEEEecccc---ceecHHHHhh
Confidence 999743 456778888866666556543 3555555443
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.13 E-value=0.00094 Score=50.95 Aligned_cols=105 Identities=15% Similarity=0.117 Sum_probs=68.6
Q ss_pred chHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC----CEEEeCCCCcHH
Q 024011 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA----DVCINYKTEDFV 197 (274)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~ 197 (274)
.+...+. +.+...+++|++||-.|+ |.|+.++.+++ .+.+|+.++.+++..+.+++.-. ..+...+...
T Consensus 55 ~p~~~a~--ml~~L~l~~g~~VLdIG~--GsGy~ta~La~-l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~-- 127 (224)
T d1vbfa_ 55 ALNLGIF--MLDELDLHKGQKVLEIGT--GIGYYTALIAE-IVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL-- 127 (224)
T ss_dssp CHHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHH-HSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG--
T ss_pred hhhhHHH--HHHHhhhcccceEEEecC--CCCHHHHHHHH-HhcccccccccHHHHHHHHHHHhcccccccccCchhh--
Confidence 3444443 236678999999999996 45777776665 47799999999888777764211 1122222111
Q ss_pred HHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 198 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
.......||.++-+++... ....++.|+++|+++..
T Consensus 128 ----g~~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 128 ----GYEEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp ----CCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred ----cchhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence 0111245999987776544 45677999999999885
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=97.13 E-value=0.00053 Score=55.93 Aligned_cols=77 Identities=9% Similarity=0.069 Sum_probs=51.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-HHHc----CCCEE-EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDL----GADVC-INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~~----g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+|++|||+|++|-+|..+++.+.+.|++|++++|+...... ++.. +...+ .|..+.+....+.+ ...+|++
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~---~~~~~~v 83 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIR---EFQPEIV 83 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHH---HHCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhh---hchhhhh
Confidence 47999999999999999999999999999999987654321 1111 12222 23333333333322 2347999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
+.+++.
T Consensus 84 ~~~aa~ 89 (356)
T d1rkxa_ 84 FHMAAQ 89 (356)
T ss_dssp EECCSC
T ss_pred hhhhcc
Confidence 998874
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.11 E-value=0.0012 Score=45.95 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=55.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
|+++|.|. |.+|..+++.+.+.|.+|++++.++++.+.+++.+...+. |..+.+..+.. +-...|.+|-+.+..
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a----~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSL----GIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHH----TGGGCSEEEECCCSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhcc----CCccccEEEEEcCch
Confidence 45788897 9999999999999999999999999999988887765443 34444443332 223478888888753
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=97.07 E-value=0.0017 Score=52.87 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH--HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+.++|+|+||+|.+|..++..+.+.|++|++++|+.+.. +.+.......++..+..+..+.+..... +.|.++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~~ 79 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINT 79 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEeec
Confidence 568999999999999999999999999999999976644 2333333223333333222233344443 477777654
Q ss_pred C
Q 024011 217 G 217 (274)
Q Consensus 217 g 217 (274)
.
T Consensus 80 ~ 80 (350)
T d1xgka_ 80 T 80 (350)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.00066 Score=55.64 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=30.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.|.+||+||+|-+|..++..+.+.|.+|++++|..
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~ 35 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA 35 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 37899999999999999999999999999999854
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=97.06 E-value=0.0019 Score=47.59 Aligned_cols=99 Identities=16% Similarity=0.034 Sum_probs=63.9
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC------------------EEEeCCCCc
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD------------------VCINYKTED 195 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~------------------~~~~~~~~~ 195 (274)
...+++|++||..|+ |.|..+..+++ .|++|++++.+++.++.+++.... .....+..+
T Consensus 15 ~l~~~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 91 (201)
T d1pjza_ 15 SLNVVPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 91 (201)
T ss_dssp HHCCCTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred HcCCCCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence 346889999999997 56788887776 599999999999998888752110 111111111
Q ss_pred HHHHHHHHhCCCCccEEEECCChh---------hHHHhhhccccCCEEEEEecC
Q 024011 196 FVARVKEETGGKGVDVILDCMGAS---------YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 196 ~~~~~~~~~~~~~~d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...... ..+|.|++...-. .+....+.|+++|++++....
T Consensus 92 l~~~~~-----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~~ 140 (201)
T d1pjza_ 92 LTARDI-----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 140 (201)
T ss_dssp STHHHH-----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred cccccc-----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEcc
Confidence 111111 2378888754421 245667889999998765433
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0024 Score=48.68 Aligned_cols=94 Identities=18% Similarity=0.111 Sum_probs=63.0
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cC-----C--CEEEeCCCCcHHHHHHH
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-----A--DVCINYKTEDFVARVKE 202 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g-----~--~~~~~~~~~~~~~~~~~ 202 (274)
.+++|++||-.|+ |.|+.++.+++..| .+|+.++++++-++.+++ .+ . ......+... .
T Consensus 73 ~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~------~ 144 (224)
T d1i1na_ 73 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM------G 144 (224)
T ss_dssp TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG------C
T ss_pred ccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccc------c
Confidence 7899999999996 55787777777655 489999999887765542 11 1 1122112110 0
Q ss_pred HhCCCCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 203 ETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
......||.|+.+..... .+..++.|+++|+++..
T Consensus 145 ~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 145 YAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 111245999998776544 46778999999999885
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.00 E-value=0.0002 Score=55.79 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=67.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cC-CCEEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-ADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g-~~~~~~~~~~~~~~~~~~~~~ 205 (274)
...+++||++||=.|+ |.|.++..+++..| .+|+.++.+++.++.+++ .+ ...+ .....+. .+...
T Consensus 79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di----~~~~~ 151 (250)
T d1yb2a1 79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDI----ADFIS 151 (250)
T ss_dssp --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCT----TTCCC
T ss_pred HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeee----ecccc
Confidence 5678999999999997 44777777887654 589999999998877763 22 2221 1111121 11223
Q ss_pred CCCccEEEECCChh--hHHHhhhccccCCEEEEEec
Q 024011 206 GKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 206 ~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (274)
...+|.|+-....+ .+..+.+.|+++|++++...
T Consensus 152 ~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P 187 (250)
T d1yb2a1 152 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 187 (250)
T ss_dssp SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred cceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence 34699998766553 47888999999999997643
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.98 E-value=0.0007 Score=50.08 Aligned_cols=40 Identities=20% Similarity=0.191 Sum_probs=35.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
+|.|+|++|++|.++++.+.+.|++|++++|++++++.+.
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~ 41 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA 41 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5778877799999999999999999999999999876653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.94 E-value=0.0042 Score=41.69 Aligned_cols=90 Identities=11% Similarity=0.054 Sum_probs=60.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHcCCCEEEeC--CCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINY--KTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.|+++||.|+ |.+|..-++.+...|++|++++..... ...+.+.+.-..... ...++ .++++|+.+
T Consensus 11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl----------~~~~lv~~a 79 (113)
T d1pjqa1 11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLL----------DSCWLAIAA 79 (113)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGG----------TTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHh----------CCCcEEeec
Confidence 4899999997 999999999999999999998755432 222223232222221 11121 348999999
Q ss_pred CChhhHH-HhhhccccCCEEEEEec
Q 024011 216 MGASYFQ-RNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 216 ~g~~~~~-~~~~~l~~~g~~v~~g~ 239 (274)
.+....+ ...+..++.|..+.+..
T Consensus 80 t~d~~~n~~i~~~a~~~~ilVNv~D 104 (113)
T d1pjqa1 80 TDDDTVNQRVSDAAESRRIFCNVVD 104 (113)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred CCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 8876654 55567778888877654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.92 E-value=0.001 Score=55.07 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=29.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~ 171 (274)
|++|||+|++|-+|..+++.+.+.|++|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 68999999999999999999999999999986
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.00034 Score=53.78 Aligned_cols=76 Identities=17% Similarity=0.195 Sum_probs=48.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+++|||+||+|-+|..+++.+.+.|. +|++++|++............. ...+..+ .+.+.+.. .++|++|.++
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~-~~~D~~~-~~~~~~~~--~~~d~vi~~~ 88 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ-EVVDFEK-LDDYASAF--QGHDVGFCCL 88 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEE-EECCGGG-GGGGGGGG--SSCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeee-eeecccc-cccccccc--cccccccccc
Confidence 357899999999999999999988885 8999998765322111111111 1112111 22233333 3589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 89 ~~ 90 (232)
T d2bkaa1 89 GT 90 (232)
T ss_dssp CC
T ss_pred cc
Confidence 85
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.87 E-value=0.0085 Score=42.41 Aligned_cols=82 Identities=16% Similarity=0.269 Sum_probs=56.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
++.+.|+ |.+|.++++-+.+.| .++++++|++++++.+.+ ++.... +... . + ...|+||-+.--.
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-~----v------~~~Div~lavkP~ 68 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-E----L------HSDDVLILAVKPQ 68 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-C----C------CTTSEEEECSCHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-c----c------cccceEEEecCHH
Confidence 5788897 999999888655555 899999999999888765 554332 2111 1 1 2368998888755
Q ss_pred hHHHhhhccccCCEEEE
Q 024011 220 YFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 220 ~~~~~~~~l~~~g~~v~ 236 (274)
.+...++.+++.++++.
T Consensus 69 ~~~~v~~~l~~~~~~vi 85 (152)
T d1yqga2 69 DMEAACKNIRTNGALVL 85 (152)
T ss_dssp HHHHHHTTCCCTTCEEE
T ss_pred HHHHhHHHHhhcccEEe
Confidence 56667777766666553
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.84 E-value=0.0034 Score=50.91 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=47.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh----hH---HHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KL---AVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~----~~---~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
|.|||+||+|-+|..++..+.+.|.+|+++++... .. +....-+...+ .|..+. +.+.+.....++|+|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~l~~~~~~~~~d~V 78 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR---KGLEKVFKEYKIDSV 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCH---HHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCH---HHHHHHHhccCCCEE
Confidence 68999999999999999999999999999864211 11 22222233322 233332 233333223458999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 79 ihlAa~ 84 (347)
T d1z45a2 79 IHFAGL 84 (347)
T ss_dssp EECCSC
T ss_pred EEcccc
Confidence 999874
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=96.83 E-value=0.0015 Score=52.89 Aligned_cols=74 Identities=20% Similarity=0.240 Sum_probs=47.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecC----hhhHHHHH---HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~----~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
+|||+||+|-+|..++..+.+.|.+|+++++. .+...... .-.... +..+-.+ .+.+.+.....++|+||+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d-~~~l~~~~~~~~~d~ViH 79 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTF-VEGDIRN-EALMTEILHDHAIDTVIH 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEE-EECCTTC-HHHHHHHHHHTTCSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEE-EEeecCC-HHHHHHHHhccCCCEEEE
Confidence 59999999999999999999999999998752 22222222 222222 2223222 123333333345899999
Q ss_pred CCC
Q 024011 215 CMG 217 (274)
Q Consensus 215 ~~g 217 (274)
+++
T Consensus 80 lAa 82 (338)
T d1udca_ 80 FAG 82 (338)
T ss_dssp CCS
T ss_pred CCC
Confidence 886
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.81 E-value=0.00068 Score=51.76 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=64.6
Q ss_pred CcchHHHHHHHHHh-hcCCCCCCEEEEecCCchHHHHHHHHHH---HcC----CeEEEEecChhhHHHHHH---------
Q 024011 120 FPEVACTVWSTVFM-TSHLSPGESFLVHGGSSGIGTFAIQMGK---CQG----VRVFVTAGSEEKLAVCKD--------- 182 (274)
Q Consensus 120 l~~~~~~a~~~l~~-~~~~~~g~~vlI~Ga~g~iG~~~~~~~~---~~g----~~v~~~~~~~~~~~~~~~--------- 182 (274)
+..|...|.. +.. ...+++|++||..|+++ |+.++.+++ ..| .+|+.++++++-.+.+++
T Consensus 61 is~P~~~a~~-l~~L~~~l~~g~~VLeIGtGs--GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~ 137 (223)
T d1r18a_ 61 ISAPHMHAFA-LEYLRDHLKPGARILDVGSGS--GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM 137 (223)
T ss_dssp ECCHHHHHHH-HHHTTTTCCTTCEEEEESCTT--SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred eehhhhHHHH-HHHHhhccCCCCeEEEecCCC--CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhh
Confidence 3344455543 322 23789999999999744 555544444 444 489999988876655432
Q ss_pred cCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 183 LGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 183 ~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
.+.. .+...+..+ .......||.++-+++... .+..++.|+++|+++..
T Consensus 138 ~~~~nv~~~~~d~~~------~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p 189 (223)
T d1r18a_ 138 LDSGQLLIVEGDGRK------GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP 189 (223)
T ss_dssp HHHTSEEEEESCGGG------CCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred cCccEEEEEeccccc------ccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence 1111 122222110 0111245998888777654 46677899999999874
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=96.80 E-value=0.0014 Score=51.35 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=30.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
+|||+||+|-+|..++..++..|++|+.++|++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence 589999999999999999999999999998764
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.80 E-value=0.0063 Score=43.88 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=61.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCC-CEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|.|. |.+|..++..+++.|. +|++.+++++.++.+++.+. +........ . .....|+|+-++-
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~--------~~~~~dlIila~p 71 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK-V--------EDFSPDFVMLSSP 71 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG-G--------GGTCCSEEEECSC
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh-h--------hccccccccccCC
Confidence 46899996 9999999999999885 89999999999999988775 333321111 0 0123688888877
Q ss_pred hhh----HHHhhhccccCCEEEEEecC
Q 024011 218 ASY----FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~----~~~~~~~l~~~g~~v~~g~~ 240 (274)
... +....+.+.++..++.++..
T Consensus 72 ~~~~~~vl~~l~~~~~~~~ii~d~~s~ 98 (171)
T d2g5ca2 72 VRTFREIAKKLSYILSEDATVTDQGSV 98 (171)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred chhhhhhhhhhhccccccccccccccc
Confidence 533 33444556666666666554
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.74 E-value=0.0044 Score=48.29 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=69.4
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----c---CC-CEEEeCCCCcHHHHHH
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----L---GA-DVCINYKTEDFVARVK 201 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~---g~-~~~~~~~~~~~~~~~~ 201 (274)
....+++||++||=.|+ |.|.++..+++..| .+|+.++.+++.++.+++ + .. ...+... +..+
T Consensus 89 i~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~--d~~~--- 161 (264)
T d1i9ga_ 89 VHEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLAD--- 161 (264)
T ss_dssp HHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGG---
T ss_pred HHHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec--cccc---
Confidence 35678999999999986 56889999998876 489999999998877753 1 11 2222111 1110
Q ss_pred HHhCCCCccEEEECCChh--hHHHhhhccccCCEEEEEec
Q 024011 202 EETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (274)
.......+|.||-....+ .+..+.+.|+++|++++.--
T Consensus 162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P 201 (264)
T d1i9ga_ 162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 201 (264)
T ss_dssp CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence 012234589887666553 37788999999999988753
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.74 E-value=0.0046 Score=47.13 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=66.4
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHh
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEET 204 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~ 204 (274)
+.+.+.+++|++||=.|+ |.|..+..+++ .+.+|+.++.++..++.+++ .+.+ .....+..++ ..
T Consensus 8 l~~~~~~~~~~rILDiGc--GtG~~~~~la~-~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~------~~ 78 (234)
T d1xxla_ 8 MIKTAECRAEHRVLDIGA--GAGHTALAFSP-YVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL------PF 78 (234)
T ss_dssp HHHHHTCCTTCEEEEESC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC------CS
T ss_pred HHHHhCCCCCCEEEEeCC--cCcHHHHHHHH-hCCeEEEEeCChhhhhhhhhhhcccccccccccccccccc------cc
Confidence 457789999999999997 45777777766 57899999999987766642 3322 1222222211 01
Q ss_pred CCCCccEEEECCChh-------hHHHhhhccccCCEEEEEe
Q 024011 205 GGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g 238 (274)
....+|+|+-+-.-. .+..+.+.|+++|++++.-
T Consensus 79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~ 119 (234)
T d1xxla_ 79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD 119 (234)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence 234599988654432 2567788999999988763
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.69 E-value=0.018 Score=40.83 Aligned_cols=102 Identities=19% Similarity=0.222 Sum_probs=70.1
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.-.-.|++++|.| .|-+|.-+++.++.+|++|+++..++-+.=++.--|.. +.. +.+... ..|++|-
T Consensus 18 ~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~-v~~---------~~~a~~--~aDi~vT 84 (163)
T d1v8ba1 18 DFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VVT---------LDEIVD--KGDFFIT 84 (163)
T ss_dssp CCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-ECC---------HHHHTT--TCSEEEE
T ss_pred CceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCc-cCc---------hhHccc--cCcEEEE
Confidence 3346799999999 69999999999999999999999888653333222332 211 122222 2799999
Q ss_pred CCChhh--HHHhhhccccCCEEEEEecCCCCccccchhhH
Q 024011 215 CMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 252 (274)
Q Consensus 215 ~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 252 (274)
+.|... ...-++.|+.+.-+..+|... .+++...+
T Consensus 85 aTGn~~vI~~~h~~~MKdgaIl~N~GHfd---~EIdv~~L 121 (163)
T d1v8ba1 85 CTGNVDVIKLEHLLKMKNNAVVGNIGHFD---DEIQVNEL 121 (163)
T ss_dssp CCSSSSSBCHHHHTTCCTTCEEEECSSTT---TSBCHHHH
T ss_pred cCCCCccccHHHHHHhhCCeEEEeccccc---hhhhhHHH
Confidence 999854 456678888877776666543 34555444
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.68 E-value=0.0034 Score=48.00 Aligned_cols=92 Identities=25% Similarity=0.342 Sum_probs=66.3
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+++.+||=.|+ |.|..+..+++ .|++|++++.+++.++.+++.+....+..+..++ ......+|+|+...
T Consensus 40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l------~~~~~~fD~ii~~~ 110 (246)
T d2avna1 40 LKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDL------PFPSGAFEAVLALG 110 (246)
T ss_dssp CCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSC------CSCTTCEEEEEECS
T ss_pred cCCCCEEEEECC--CCchhcccccc-cceEEEEeeccccccccccccccccccccccccc------ccccccccceeeec
Confidence 457788988886 56888887765 5999999999999999998877665555444332 12234599998765
Q ss_pred Ch-h-------hHHHhhhccccCCEEEEE
Q 024011 217 GA-S-------YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 217 g~-~-------~~~~~~~~l~~~g~~v~~ 237 (274)
.. . .+..+.+.|+++|.++..
T Consensus 111 ~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~ 139 (246)
T d2avna1 111 DVLSYVENKDKAFSEIRRVLVPDGLLIAT 139 (246)
T ss_dssp SHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence 43 1 245677889999988764
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=96.67 E-value=0.0045 Score=48.84 Aligned_cols=75 Identities=24% Similarity=0.365 Sum_probs=49.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-----HH---HHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----LA---VCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-----~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
-++|||+|++|-+|..++..+...|.+|++++|+... .+ .+...+... +..+..+ .+.+.+... +.+.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~-v~~d~~d-~~~~~~~~~--~~~~ 78 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL-IEASLDD-HQRLVDALK--QVDV 78 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEE-ECCCSSC-HHHHHHHHT--TCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEE-EEeeccc-chhhhhhcc--Ccch
Confidence 3569999999999999999999999999999986432 22 223334433 3223222 233444443 3788
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
++++++.
T Consensus 79 ~~~~~~~ 85 (312)
T d1qyda_ 79 VISALAG 85 (312)
T ss_dssp EEECCCC
T ss_pred hhhhhhh
Confidence 8887753
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.66 E-value=0.011 Score=45.59 Aligned_cols=95 Identities=21% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
.++|++||=.|+++ |..++. +++.|++|+.++.+++.++.+++ .+.. .+... +..+ ......+|+
T Consensus 118 ~~~g~~VLDiGcGs--G~l~i~-aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~----~~~~~~fD~ 187 (254)
T d2nxca1 118 LRPGDKVLDLGTGS--GVLAIA-AEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEA----ALPFGPFDL 187 (254)
T ss_dssp CCTTCEEEEETCTT--SHHHHH-HHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHH----HGGGCCEEE
T ss_pred cCccCEEEEcccch--hHHHHH-HHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---cccc----cccccccch
Confidence 67899999999754 555554 44578999999999998877652 3332 22222 2211 222345999
Q ss_pred EEECCChhh----HHHhhhccccCCEEEEEecCC
Q 024011 212 ILDCMGASY----FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 212 vi~~~g~~~----~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|+.+.-... ++...+.|+++|++++.|...
T Consensus 188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgil~ 221 (254)
T d2nxca1 188 LVANLYAELHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred hhhccccccHHHHHHHHHHhcCCCcEEEEEecch
Confidence 998765433 456678899999999877543
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=96.65 E-value=0.0054 Score=48.20 Aligned_cols=101 Identities=18% Similarity=0.062 Sum_probs=68.3
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHHHHH
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEE 203 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~ 203 (274)
+.....+++|.+||=.|+ |.|..+..++++.|++|++++.++..++.+++ .|.. .+...+..++ .
T Consensus 59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l------~ 130 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI------P 130 (282)
T ss_dssp HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC------S
T ss_pred HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccc------c
Confidence 345567899999999997 46777888888889999999999887766653 3321 2222232221 1
Q ss_pred hCCCCccEEEECCChh-------hHHHhhhccccCCEEEEEec
Q 024011 204 TGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~ 239 (274)
.....+|+|+-.-.-. .+..+.+.|+++|+++....
T Consensus 131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~ 173 (282)
T d2o57a1 131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 173 (282)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1234599997644321 25677889999999987644
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.64 E-value=0.0046 Score=45.46 Aligned_cols=100 Identities=12% Similarity=0.133 Sum_probs=64.9
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC-EEEeCCCCcHHHHHHHHhCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (274)
...++++|++||=.|+ |.|.....+++. +.+|+.++.+++.++.++ +.+.. .+ .....+..+. .....
T Consensus 27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~gda~~~---~~~~~ 99 (186)
T d1l3ia_ 27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGDAPEA---LCKIP 99 (186)
T ss_dssp HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESCHHHH---HTTSC
T ss_pred HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEECchhhc---ccccC
Confidence 4458899999999987 446666666654 679999999999877665 34431 21 1111222222 12234
Q ss_pred CccEEEECCChh----hHHHhhhccccCCEEEEEec
Q 024011 208 GVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 208 ~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~ 239 (274)
.+|.++-..... .+..+.+.|+++|+++....
T Consensus 100 ~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 135 (186)
T d1l3ia_ 100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (186)
T ss_dssp CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEee
Confidence 599988765432 35677788999999987653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.64 E-value=0.0041 Score=49.60 Aligned_cols=35 Identities=23% Similarity=0.222 Sum_probs=31.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
++|||+|++|-+|..++..+...|++|++++|...
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~ 35 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS 35 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC
Confidence 68999999999999999999999999999997643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=96.60 E-value=0.0015 Score=52.96 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=46.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEE--eCCCC-cHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCI--NYKTE-DFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~-~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+|||+|++|-+|..+++.+...| .+|+++++.......+.+...-..+ |.... ++.+... .++|+||.+++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~-----~~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV-----KKCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH-----HHCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH-----hCCCccccccc
Confidence 69999999999999999888888 5899988765544333222111222 32222 3333222 13899999987
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 77 ~ 77 (342)
T d2blla1 77 I 77 (342)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=96.56 E-value=0.0053 Score=46.49 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=65.7
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCE--EEeCCCCcHHHHHHHHh
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEET 204 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~ 204 (274)
+.+.++++++++||=.|++ .|..+..++ ..|++|++++.+++.++.+++ .+.+. ....+..++ ..
T Consensus 7 ll~~~~l~~~~rVLDiGcG--~G~~~~~l~-~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l------~~ 77 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVATG--GGHVANAFA-PFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM------PF 77 (231)
T ss_dssp HHHHHTCCSCCEEEEETCT--TCHHHHHHG-GGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC------CS
T ss_pred HHHhcCCCCcCEEEEeccc--CcHHHHHHH-HhCCEEEEEECCHHHHhhhhhcccccccccccccccccccc------cc
Confidence 3467889999999999973 566666655 458999999999987766642 34332 222222221 01
Q ss_pred CCCCccEEEECCChh-------hHHHhhhccccCCEEEEEe
Q 024011 205 GGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g 238 (274)
....+|+|+....-. .+..+.+.|+++|++++.-
T Consensus 78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 118 (231)
T d1vl5a_ 78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 118 (231)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 234599998665432 2567788999999999763
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.51 E-value=0.036 Score=38.90 Aligned_cols=99 Identities=14% Similarity=0.202 Sum_probs=63.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecC--hhhH-HHHHHcCCCEEEeCCCCcHHHHHHHHh----------
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGS--EEKL-AVCKDLGADVCINYKTEDFVARVKEET---------- 204 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~--~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~---------- 204 (274)
.+++.|.|+||.+|.-+..+.++. .++|+..+.. -+.+ +.++++.+..+.-.+... .+.+.+..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~-~~~l~~~~~~~~~~v~~g 80 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSL-YNDLKEALAGSSVEAAAG 80 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGG-HHHHHHHTTTCSSEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHH-HHHHHHHhhhcccccccC
Confidence 378999999999999999999886 4677776533 3333 556678887775443322 11222211
Q ss_pred -------CCCCccEEEECC-ChhhHHHhhhccccCCEEEEEecC
Q 024011 205 -------GGKGVDVILDCM-GASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 205 -------~~~~~d~vi~~~-g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.....|+++++. |..-+...+.+++.+-+ +.++..
T Consensus 81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~-iaLANK 123 (150)
T d1r0ka2 81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKT-VALANK 123 (150)
T ss_dssp HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSE-EEECCS
T ss_pred ccchheecccccceeeeecCchhHHHHHHHHHhcCCE-EEEecc
Confidence 112479999986 44557778888877644 445443
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.51 E-value=0.0028 Score=51.70 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.++.+|||+||+|-+|..++..+.+.|.+|+++++....... ...........+..+. +.+.+... ++|.|+.+++
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~-~~~~~~~~--~~d~Vih~a~ 88 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVM-ENCLKVTE--GVDHVFNLAA 88 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSH-HHHHHHHT--TCSEEEECCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhH-HHHHHHhh--cCCeEeeccc
Confidence 457899999999999999999999999999999865432111 1122223322333332 33444443 5899999885
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 89 ~ 89 (363)
T d2c5aa1 89 D 89 (363)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.00045 Score=55.55 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=30.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
++|||+|++|-+|..++..+.+.|.+|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 68999999999999999999999999999875
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.011 Score=43.01 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=33.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
...+++|+|.|+ |+.|+.++..+.++|.+|.+..+++
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 455789999997 9999999999999999999999764
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.45 E-value=0.018 Score=41.15 Aligned_cols=96 Identities=15% Similarity=0.073 Sum_probs=67.7
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.++|.....+..|+...-.-.|++++|.|.+.-+|.-++.++.+.|++|+.+..... +..+
T Consensus 16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-------------------~l~~ 76 (166)
T d1b0aa1 16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------------NLRH 76 (166)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------------CHHH
T ss_pred CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc-------------------hhHH
Confidence 456665666655655444456999999999999999999999999999987764332 2222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.+++ .|++|.++|...+- --++++++..++.+|..
T Consensus 77 ~~~~------ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 77 HVEN------ADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN 111 (166)
T ss_dssp HHHH------CSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred HHhh------hhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence 2222 79999999865432 13577888888888765
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.45 E-value=0.017 Score=47.71 Aligned_cols=102 Identities=18% Similarity=0.190 Sum_probs=65.8
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHc---------------CCCEE-EeCCCC
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL---------------GADVC-INYKTE 194 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~---------------g~~~~-~~~~~~ 194 (274)
.+..++++|++++=.|+ |.|..+.++++..|+ +++.++.++..++.+++. +.... ...+..
T Consensus 209 l~~l~Lkpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~ 286 (406)
T d1u2za_ 209 YQQCQLKKGDTFMDLGS--GVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 286 (406)
T ss_dssp HHHTTCCTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHhCCCCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence 36678999999888884 789999999999997 899999998876665421 11111 111111
Q ss_pred cHHHHHHHHhCCCCccEEEECCC---h---hhHHHhhhccccCCEEEEEe
Q 024011 195 DFVARVKEETGGKGVDVILDCMG---A---SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 195 ~~~~~~~~~~~~~~~d~vi~~~g---~---~~~~~~~~~l~~~g~~v~~g 238 (274)
+ .+....... .+|+++.+.- . ..+.+..+.|++||+++..-
T Consensus 287 ~-~~~~d~~~~--~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~ 333 (406)
T d1u2za_ 287 D-NNRVAELIP--QCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 333 (406)
T ss_dssp T-CHHHHHHGG--GCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred h-ccccccccc--cceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence 1 112222222 2678775432 1 23567788999999999753
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.44 E-value=0.01 Score=37.86 Aligned_cols=68 Identities=16% Similarity=0.230 Sum_probs=48.4
Q ss_pred CEEEEecCCchHHH-HHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGT-FAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~-~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.++-+.|- ||+|+ +++++++..|++|...++.+. ..+.+++.|.......+.+++ .+.|+|+-+.+.
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i----------~~~d~vV~SsAI 70 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW----------YDPDLVIKTPAV 70 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC----------CCCSEEEECTTC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc----------CCCCEEEEecCc
Confidence 35667786 88997 557999999999999998764 457788899876443232222 247988877664
Q ss_pred h
Q 024011 219 S 219 (274)
Q Consensus 219 ~ 219 (274)
.
T Consensus 71 ~ 71 (89)
T d1j6ua1 71 R 71 (89)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.41 E-value=0.0021 Score=48.29 Aligned_cols=69 Identities=12% Similarity=0.198 Sum_probs=44.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.++|||+||+|-+|..+++.+...|. +|++..|++... ... ++....++.+ +.+.. ...+|.||+++|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------~~~--~~~~~~d~~~-~~~~~-~~~~d~vi~~~g 71 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------HPR--LDNPVGPLAE-LLPQL-DGSIDTAFCCLG 71 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------CTT--EECCBSCHHH-HGGGC-CSCCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------ccc--ccccccchhh-hhhcc-ccchheeeeeee
Confidence 37999999999999999999998887 677666653210 011 1222233332 22222 234899999987
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 72 ~ 72 (212)
T d2a35a1 72 T 72 (212)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.38 E-value=0.017 Score=41.15 Aligned_cols=44 Identities=18% Similarity=0.073 Sum_probs=39.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~ 186 (274)
+|.|.|. |.+|..+++-+.+.|++|++.+|++++.+.+.+.+..
T Consensus 2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~ 45 (161)
T d1vpda2 2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAE 45 (161)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhh
Confidence 4788896 9999999999999999999999999999988877753
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.011 Score=47.37 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=65.0
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHH----cC-----------CCEE--EeCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LG-----------ADVC--INYKT 193 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~----~g-----------~~~~--~~~~~ 193 (274)
...+++||++||=.|+ |.|.++..+++..|. +|+.++.+++.++.+++ .+ .+.+ ...+.
T Consensus 92 ~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di 169 (324)
T d2b25a1 92 SMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 169 (324)
T ss_dssp HHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred HHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecch
Confidence 5678999999999886 458889999988764 89999999988776642 11 1111 12222
Q ss_pred CcHHHHHHHHhCCCCccEEEECCCh--hhHHHhhhccccCCEEEEEe
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g 238 (274)
.++...+ ....+|.||--... ..+..+.+.|+++|+++++-
T Consensus 170 ~~~~~~~----~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 170 SGATEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp TCCC-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred hhccccc----CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence 2221111 12348888754443 24788899999999999764
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.35 E-value=0.022 Score=40.17 Aligned_cols=85 Identities=13% Similarity=0.158 Sum_probs=61.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
++.+.|+ |.+|.+++.-+...|.++++..|+.++.+.+ ++++.... .+..+.+ + ..|+||-+.--..
T Consensus 2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~-----~~~~~~~-~-----~~dvIilavkp~~ 69 (152)
T d2ahra2 2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA-----MSHQDLI-D-----QVDLVILGIKPQL 69 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC-----SSHHHHH-H-----TCSEEEECSCGGG
T ss_pred EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee-----chhhhhh-h-----ccceeeeecchHh
Confidence 4788896 9999999998888899999999998887766 45665432 1222222 2 3799998887666
Q ss_pred HHHhhhccccCCEEEEEe
Q 024011 221 FQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 221 ~~~~~~~l~~~g~~v~~g 238 (274)
....++.++++-.++.+.
T Consensus 70 ~~~vl~~l~~~~~iis~~ 87 (152)
T d2ahra2 70 FETVLKPLHFKQPIISMA 87 (152)
T ss_dssp HHHHHTTSCCCSCEEECC
T ss_pred HHHHhhhcccceeEeccc
Confidence 777777787766666443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.34 E-value=0.011 Score=40.96 Aligned_cols=77 Identities=16% Similarity=0.233 Sum_probs=52.9
Q ss_pred EEEEecCCchHHHHHHHHHHH-cCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+|.|.|++|-+|..+++...+ .++++.......+.+......++|.++|.+..+......+..-..+.-+|+-++|-
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~ 78 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 78 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEecccc
Confidence 588999999999998888765 46677665544444555555677888887776555444443333457788877774
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=96.33 E-value=0.0066 Score=47.46 Aligned_cols=76 Identities=18% Similarity=0.264 Sum_probs=49.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH------HHHH---HcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL------AVCK---DLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~------~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
-++|||+||+|-+|..++..+.+.|.+|++++|+.... +.+. ..+. .++..+..+.. ...+... +.+
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~-~~~~~~~--~~~ 78 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHA-SLVEAVK--NVD 78 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHH-HHHHHHH--TCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc-EEEEeecccch-hhhhhhh--hce
Confidence 36799999999999999999999999999999865431 2222 2233 33333333322 2233332 378
Q ss_pred EEEECCChh
Q 024011 211 VILDCMGAS 219 (274)
Q Consensus 211 ~vi~~~g~~ 219 (274)
.++++++..
T Consensus 79 ~vi~~~~~~ 87 (307)
T d1qyca_ 79 VVISTVGSL 87 (307)
T ss_dssp EEEECCCGG
T ss_pred eeeeccccc
Confidence 899888753
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.039 Score=38.75 Aligned_cols=100 Identities=9% Similarity=0.221 Sum_probs=64.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC--CeEEEEec--ChhhH-HHHHHcCCCEEEeCCCCcH---H---------------
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAG--SEEKL-AVCKDLGADVCINYKTEDF---V--------------- 197 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~--~~~~~-~~~~~~g~~~~~~~~~~~~---~--------------- 197 (274)
+++.|.|+||.+|.-+..+.++.. ++|...+. +-+.+ +.++++.+..+.-.+.... .
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g 81 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG 81 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence 478999999999999999999874 57776653 33333 4556788877764443221 1
Q ss_pred -HHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCC
Q 024011 198 -ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 -~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+.+.......|+|+++..+ .-+...+..++.+ +-+.+...+
T Consensus 82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g-k~iaLANKE 126 (151)
T d1q0qa2 82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLANKD 126 (151)
T ss_dssp HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT-CEEEECCHC
T ss_pred hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC-CeEEEEccH
Confidence 122222333458999998755 4577777777775 445555443
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.18 E-value=0.012 Score=38.04 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=50.4
Q ss_pred CCCCCEEEEecCCchHHHHH-HHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 137 LSPGESFLVHGGSSGIGTFA-IQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~-~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+..+++.+.|- ||+|+.+ +++++..|++|...++... ..+.+.+.|.......+.... .+.|+|+-
T Consensus 5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i----------~~~d~vV~ 73 (96)
T d1p3da1 5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHI----------EGASVVVV 73 (96)
T ss_dssp CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGG----------TTCSEEEE
T ss_pred chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccC----------CCCCEEEE
Confidence 456788999997 8899666 8999999999999997644 446677788765443222211 24788887
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
+.+.
T Consensus 74 S~AI 77 (96)
T d1p3da1 74 SSAI 77 (96)
T ss_dssp CTTS
T ss_pred CCCc
Confidence 7664
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.15 E-value=0.0036 Score=42.35 Aligned_cols=66 Identities=11% Similarity=0.183 Sum_probs=46.1
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.++..++++|.|+ |.+|.-++..+++.|.+|.++.+.+.- +...+.+..+.+.+....+|+++..+
T Consensus 18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~i------------l~~~d~~~~~~~~~~l~~~gV~i~~~ 83 (117)
T d1onfa2 18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRI------------LRKFDESVINVLENDMKKNNINIVTF 83 (117)
T ss_dssp TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSS------------CTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhccc------------cccccHHHHHHHHHHHHhCCCEEEEC
Confidence 4455789999997 999999999999999999999976532 11122344455555444456666654
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.0036 Score=47.69 Aligned_cols=103 Identities=12% Similarity=-0.056 Sum_probs=64.9
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-------------EeC-------C
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-------------INY-------K 192 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-------------~~~-------~ 192 (274)
+...+.++.+||..|+ |.|..+..+++ .|++|+.++.+++.++.+++...... ... .
T Consensus 39 ~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 115 (229)
T d2bzga1 39 TFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY 115 (229)
T ss_dssp HHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred HhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence 4456788999999997 45777777765 69999999999998887764322110 000 0
Q ss_pred CCcHHHHHHHHhCCCCccEEEECCChh---------hHHHhhhccccCCEEEEEecC
Q 024011 193 TEDFVARVKEETGGKGVDVILDCMGAS---------YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g~~ 240 (274)
..++.+ +. ......+|+|+++..-. .+....+.|+++|++++....
T Consensus 116 ~~d~~~-l~-~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~ 170 (229)
T d2bzga1 116 CCSIFD-LP-RTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS 170 (229)
T ss_dssp ESCGGG-GG-GSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred Ecchhh-cc-ccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence 011110 00 11223589999876421 245678899999997766543
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.028 Score=40.36 Aligned_cols=97 Identities=13% Similarity=0.069 Sum_probs=68.5
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
+.+||...+.+..|++..---.|+++.|.|.+.-+|.-++.++.+.|++|+.+......+.
T Consensus 17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~------------------- 77 (170)
T d1a4ia1 17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD------------------- 77 (170)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH-------------------
Confidence 4466666666666655444457999999999999999999999999999998775433221
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+ .. +..|+++-++|...+- --++++++-.++++|..
T Consensus 78 ~----~~--~~aDivi~a~G~~~~i-~~~~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 78 E----EV--NKGDILVVATGQPEMV-KGEWIKPGAIVIDCGIN 113 (170)
T ss_dssp H----HH--TTCSEEEECCCCTTCB-CGGGSCTTCEEEECCCB
T ss_pred H----HH--hhccchhhcccccccc-ccccccCCCeEeccCcc
Confidence 1 11 1278888888865432 23577888888888764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0065 Score=48.95 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=30.6
Q ss_pred CEE-EEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 141 ESF-LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 141 ~~v-lI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
++| ||+|++|-+|..++..+...|++|++++|..
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 346 9999999999999999999999999999854
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.03 E-value=0.0023 Score=45.94 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=55.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC--CEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+|+|.|+ |.+|.+.+..+.+.|.+|.+++|++++.+.....+. .........+..+.+ ..+|++|.+....
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~D~iii~vka~ 74 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL------ATSDLLLVTLKAW 74 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH------HTCSEEEECSCGG
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhh------cccceEEEeeccc
Confidence 6899998 999999999999999999999998775433222111 111100011112222 2389999999876
Q ss_pred hHHHhhh----ccccCCEEEEEe
Q 024011 220 YFQRNLG----SLNIDGRLFIIG 238 (274)
Q Consensus 220 ~~~~~~~----~l~~~g~~v~~g 238 (274)
.....++ .+.++..++.+.
T Consensus 75 ~~~~~~~~l~~~~~~~~~Iv~~q 97 (167)
T d1ks9a2 75 QVSDAVKSLASTLPVTTPILLIH 97 (167)
T ss_dssp GHHHHHHHHHTTSCTTSCEEEEC
T ss_pred chHHHHHhhccccCcccEEeecc
Confidence 5544443 344555566553
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.98 E-value=0.0083 Score=44.63 Aligned_cols=85 Identities=20% Similarity=0.262 Sum_probs=60.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|++++|.|. |.+|..+++++...|++|++++.+.+++.....++...+- .++ .+ ...+|+++=|+.
T Consensus 25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~---~~~-------~~-~~~~DI~iPcA~ 92 (201)
T d1c1da1 25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVA---LED-------VL-STPCDVFAPCAM 92 (201)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC---GGG-------GG-GCCCSEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccC---ccc-------cc-cccceeeecccc
Confidence 36899999996 9999999999999999999999998888888887765431 111 11 134898887775
Q ss_pred hhh-HHHhhhccccCCEEEE
Q 024011 218 ASY-FQRNLGSLNIDGRLFI 236 (274)
Q Consensus 218 ~~~-~~~~~~~l~~~g~~v~ 236 (274)
... .....+.++ .+++.
T Consensus 93 ~~~I~~~~a~~i~--ak~i~ 110 (201)
T d1c1da1 93 GGVITTEVARTLD--CSVVA 110 (201)
T ss_dssp SCCBCHHHHHHCC--CSEEC
T ss_pred cccccHHHHhhhh--hheee
Confidence 432 233444443 35553
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=95.96 E-value=0.079 Score=36.96 Aligned_cols=78 Identities=13% Similarity=0.079 Sum_probs=53.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC-cHHHHHHHHhCCC-CccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGK-GVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~-~~d~vi~~~g~ 218 (274)
++|.|.|+.|.+|...+..+++.|++|.+.+++.+........+++.++..... ...+.+.+..... .=.+++|+.+.
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~Sv 89 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSV 89 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEeccc
Confidence 578999977999999999999999999999998876655555666766654432 3333333322211 12488888765
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.93 E-value=0.061 Score=39.40 Aligned_cols=36 Identities=8% Similarity=0.029 Sum_probs=32.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
|+++.|.|. |.+|..++++++..|++++..++....
T Consensus 47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 82 (191)
T d1gdha1 47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS 82 (191)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred ccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence 799999996 999999999999999999999876543
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.92 E-value=0.066 Score=38.94 Aligned_cols=87 Identities=15% Similarity=0.068 Sum_probs=57.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..++++++..|++|+..++........ ..+... .++ +++.. ..|+|+.+...
T Consensus 43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~~~~~~------~~l-~ell~-----~sDiv~~~~Pl 108 (184)
T d1ygya1 43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-QLGIEL------LSL-DDLLA-----RADFISVHLPK 108 (184)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-HHTCEE------CCH-HHHHH-----HCSEEEECCCC
T ss_pred cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh-hcCcee------ccH-HHHHh-----hCCEEEEcCCC
Confidence 5789999996 9999999999999999999998765543322 223221 122 22222 16877776542
Q ss_pred h-h-----HHHhhhccccCCEEEEEec
Q 024011 219 S-Y-----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~-~-----~~~~~~~l~~~g~~v~~g~ 239 (274)
. . -...++.|+++..++.++.
T Consensus 109 t~~T~~lin~~~l~~mk~~a~lIN~sR 135 (184)
T d1ygya1 109 TPETAGLIDKEALAKTKPGVIIVNAAR 135 (184)
T ss_dssp STTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CchhhhhhhHHHHhhhCCCceEEEecc
Confidence 1 1 2456777888777776654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.92 E-value=0.026 Score=41.67 Aligned_cols=86 Identities=15% Similarity=0.076 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|- |.+|..++++++..|++|++.++..+..... .+. ...++.+.+.+ .|+|+.+...
T Consensus 42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--~~~------~~~~l~~~l~~------sDii~~~~pl 106 (197)
T d1j4aa1 42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEK--KGY------YVDSLDDLYKQ------ADVISLHVPD 106 (197)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--TTC------BCSCHHHHHHH------CSEEEECSCC
T ss_pred cCCeEEEecc-cccchhHHHhHhhhcccccccCccccccccc--cee------eeccccccccc------cccccccCCc
Confidence 4799999996 9999999999999999999998665432221 111 11222222221 6777776542
Q ss_pred h-h-----HHHhhhccccCCEEEEEec
Q 024011 219 S-Y-----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~-~-----~~~~~~~l~~~g~~v~~g~ 239 (274)
. . -...++.|+++..+|.++.
T Consensus 107 t~~T~~li~~~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 107 VPANVHMINDESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp CGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred cccccccccHHHHhhhCCccEEEecCc
Confidence 1 1 2455677777766666654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.90 E-value=0.04 Score=39.18 Aligned_cols=45 Identities=13% Similarity=-0.034 Sum_probs=39.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~ 186 (274)
++|.+.|- |.+|..++.-+.+.|++|.+.+|+.++.+.+.+.+..
T Consensus 2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~ 46 (162)
T d3cuma2 2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGAS 46 (162)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE
T ss_pred CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcc
Confidence 46888895 9999999999999999999999999998888776643
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.82 E-value=0.018 Score=41.83 Aligned_cols=50 Identities=8% Similarity=0.037 Sum_probs=38.4
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
+|.+...--+|++++|.|+ ||.+.+++..+...| +++++.|+.++.+.+.
T Consensus 8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~ 57 (177)
T d1nvta1 8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALA 57 (177)
T ss_dssp HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHH
T ss_pred HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHH
Confidence 4444333346899999997 899999888887666 9999999988876553
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=95.78 E-value=0.024 Score=40.97 Aligned_cols=43 Identities=14% Similarity=-0.007 Sum_probs=37.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG 184 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g 184 (274)
.+|.+.|- |.+|..++.-+.+.|++|++.+|++++.+.+.+.+
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~ 45 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE 45 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhc
Confidence 45889996 99999999999999999999999999988876543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.77 E-value=0.014 Score=40.01 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=26.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~ 171 (274)
++.|.|++|-+|+++.+++...+.+++...
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~i 31 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKV 31 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 589999999999999999999999877643
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.75 E-value=0.017 Score=46.48 Aligned_cols=32 Identities=28% Similarity=0.298 Sum_probs=29.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
++|||+||+|-+|..++..+.+.|.+|+++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~ 34 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 68999999999999999999999999999863
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.75 E-value=0.055 Score=43.18 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=30.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
-+++||+|++|-+|..++..+.+.|.+|+++++
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 478999999999999999999999999999985
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.70 E-value=0.04 Score=40.27 Aligned_cols=43 Identities=14% Similarity=-0.010 Sum_probs=35.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (274)
.++++.|.|. |.+|..+++.++..|.+|...++........+.
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~ 85 (188)
T d2naca1 43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE 85 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH
T ss_pred cccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccc
Confidence 5789999996 999999999999999999999976544443333
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.69 E-value=0.099 Score=38.28 Aligned_cols=88 Identities=15% Similarity=0.089 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..+++.++..|++|+..++..... .....+... ..++. ++... .|+|+.+...
T Consensus 48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~-~~~~~~~~~-----~~~l~-~ll~~-----sD~i~~~~pl 114 (193)
T d1mx3a1 48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQR-----VSTLQ-DLLFH-----SDCVTLHCGL 114 (193)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEE-----CSSHH-HHHHH-----CSEEEECCCC
T ss_pred eCceEEEecc-ccccccceeeeeccccceeeccCccccc-chhhhcccc-----ccchh-hcccc-----CCEEEEeecc
Confidence 5889999996 9999999999999999999998754432 111222211 11222 22211 5777665542
Q ss_pred h-h-----HHHhhhccccCCEEEEEec
Q 024011 219 S-Y-----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~-~-----~~~~~~~l~~~g~~v~~g~ 239 (274)
. . -...++.|+++..++.++.
T Consensus 115 t~~T~~li~~~~l~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 115 NEHNHHLINDFTVKQMRQGAFLVNTAR 141 (193)
T ss_dssp CTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred cccchhhhhHHHHhccCCCCeEEecCC
Confidence 1 1 2345667777766666654
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.68 E-value=0.034 Score=41.42 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=60.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.++++.+||=.|+ |.|..+..+++ .|.+|++++.+++.++.+++ .+.. ..+..+..++ ......+|
T Consensus 34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l------~~~~~~fD 104 (226)
T d1ve3a1 34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL------SFEDKTFD 104 (226)
T ss_dssp SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC------CSCTTCEE
T ss_pred hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccccc------cccCcCce
Confidence 3577889999997 44777777665 58999999999998877653 3322 2222222221 11224589
Q ss_pred EEEECCChh---------hHHHhhhccccCCEEEEE
Q 024011 211 VILDCMGAS---------YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 211 ~vi~~~g~~---------~~~~~~~~l~~~g~~v~~ 237 (274)
+|+-...-. .+..+.+.|+++|++++.
T Consensus 105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~ 140 (226)
T d1ve3a1 105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 140 (226)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence 988654422 245667789999998754
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.64 E-value=0.13 Score=40.96 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=65.5
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-----------cC----CCEEEeCCCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-----------LG----ADVCINYKTE 194 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-----------~g----~~~~~~~~~~ 194 (274)
+.+..+++++++++=.|+ |.|..+.++++..++ +++.++.+++..+.+++ .| .-.....+..
T Consensus 143 ~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~ 220 (328)
T d1nw3a_ 143 MIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 220 (328)
T ss_dssp HHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred HHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence 346678999999988885 789999999999888 79999999887655532 11 1122333332
Q ss_pred c--HHHHHHHHhCCCCccEEEECCCh--h----hHHHhhhccccCCEEEEEe
Q 024011 195 D--FVARVKEETGGKGVDVILDCMGA--S----YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 195 ~--~~~~~~~~~~~~~~d~vi~~~g~--~----~~~~~~~~l~~~g~~v~~g 238 (274)
+ +.+...+ +|+|+-+.-. . .+.+..+.|++||+++..-
T Consensus 221 ~~~~~~~~~~------advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~ 266 (328)
T d1nw3a_ 221 SEEWRERIAN------TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 266 (328)
T ss_dssp SHHHHHHHHH------CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccCc------ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence 2 2222211 5777754321 1 2456778899999999764
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=95.62 E-value=0.039 Score=40.39 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=55.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC------CEEEeCC---CCcHHHHHHHHhCCCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA------DVCINYK---TEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~~~~~~~d~ 211 (274)
++|.|.|+ |.+|.+++..+...|.+|.+++|+++..+.+.+.+. ...+..+ ..++.+. .. +.|+
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a----~~--~ad~ 80 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKA----YN--GAEI 80 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHH----HT--TCSC
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhc----cC--CCCE
Confidence 46899997 999999999999999999999999998887764221 1111110 1222222 22 3799
Q ss_pred EEECCChhhHHHhhhcc
Q 024011 212 ILDCMGASYFQRNLGSL 228 (274)
Q Consensus 212 vi~~~g~~~~~~~~~~l 228 (274)
+|-+.....+...++.+
T Consensus 81 iiiavPs~~~~~~~~~~ 97 (189)
T d1n1ea2 81 ILFVIPTQFLRGFFEKS 97 (189)
T ss_dssp EEECSCHHHHHHHHHHH
T ss_pred EEEcCcHHHHHHHHHHH
Confidence 99999876665555543
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.62 E-value=0.013 Score=42.87 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=55.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.+|..++++++..|++|++.+++..+. .... ..++ .+... ..|+|+.+..-
T Consensus 41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~-------~~~~----~~~l----~ell~--~sDiv~~~~pl 102 (181)
T d1qp8a1 41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG-------PWRF----TNSL----EEALR--EARAAVCALPL 102 (181)
T ss_dssp TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS-------SSCC----BSCS----HHHHT--TCSEEEECCCC
T ss_pred cCceEEEecc-ccccccceeeeecccccccccccccccc-------ceee----eech----hhhhh--ccchhhccccc
Confidence 4899999996 9999999999999999999999875421 1110 1122 12222 26888776642
Q ss_pred h------hHHHhhhccccCCEEEEEec
Q 024011 219 S------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~------~~~~~~~~l~~~g~~v~~g~ 239 (274)
. .-...++.|+++..++.++.
T Consensus 103 ~~~t~~li~~~~l~~mk~~ailIN~~R 129 (181)
T d1qp8a1 103 NKHTRGLVKYQHLALMAEDAVFVNVGR 129 (181)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred ccccccccccceeeeccccceEEeccc
Confidence 1 12456777888777777764
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.60 E-value=0.013 Score=43.18 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=34.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~ 180 (274)
++|.|.|+ |-+|..+++++...|++|++.+++++.++.+
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a 43 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS 43 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence 67999997 9999999999999999999999998866544
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.56 E-value=0.0079 Score=40.49 Aligned_cols=63 Identities=27% Similarity=0.294 Sum_probs=44.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
..++++|.|+ |.+|.-+++.+.+.|.+|.++.+.+.-+ ..-+.+..+.+.+....+|+++..+
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~il------------~~~d~~~~~~l~~~l~~~GI~i~~~ 83 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEIL------------SGFEKQMAAIIKKRLKKKGVEVVTN 83 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSS------------TTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred cCCeEEEECC-CccceeeeeeecccccEEEEEEecceec------------ccccchhHHHHHHHHHhcCCEEEcC
Confidence 3588999997 9999999999999999999999776421 1112234445555444456777764
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.48 E-value=0.0065 Score=41.35 Aligned_cols=63 Identities=16% Similarity=0.089 Sum_probs=44.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.++++|.|+ |.+|.-+++.+.++|.+|.++.+++.-+ ...+.+..+.+.+....+|+++..++
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~l------------~~~d~ei~~~l~~~l~~~GV~i~~~~ 85 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQIG------------ASMDGEVAKATQKFLKKQGLDFKLST 85 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSS------------SSSCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccccc------------hhhhhhhHHHHHHHHHhccceEEeCC
Confidence 478999997 9999999999999999999999765421 11223444555554444567766543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=95.40 E-value=0.013 Score=46.41 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=29.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
++|||+|++|-+|..+++.|.+.|..+++++..
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~ 35 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR 35 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence 579999999999999999999999988776543
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.38 E-value=0.0038 Score=47.56 Aligned_cols=98 Identities=17% Similarity=0.079 Sum_probs=61.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC---CEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
..+|++||-.|+ |.|..+..+++..+.++++++.+++.++.+++... ..+. ....+ ............+|.++
T Consensus 51 ~~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~fD~i~ 126 (229)
T d1zx0a1 51 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVI-PLKGL-WEDVAPTLPDGHFDGIL 126 (229)
T ss_dssp TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEE-EEESC-HHHHGGGSCTTCEEEEE
T ss_pred ccCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccc-ccccc-cccccccccccccccee
Confidence 367889999996 56778888887777799999999998888764321 1111 11112 22222233344688774
Q ss_pred -ECCChh-----------hHHHhhhccccCCEEEEEe
Q 024011 214 -DCMGAS-----------YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 214 -~~~g~~-----------~~~~~~~~l~~~g~~v~~g 238 (274)
|..... .+..+.+.|+++|+++...
T Consensus 127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~ 163 (229)
T d1zx0a1 127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 163 (229)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence 543221 2345678899999998643
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.17 E-value=0.015 Score=39.22 Aligned_cols=36 Identities=19% Similarity=0.054 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
..++++|.|+ |.+|.-.++.+++.|.+|.++.+++.
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 3588999997 99999999999999999999997654
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.10 E-value=0.025 Score=42.79 Aligned_cols=100 Identities=21% Similarity=0.132 Sum_probs=64.9
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHHc----CCCEEEeCCCCcHHHHHHHHhCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+...++||++||=.|+ |.|..+..+++..| -+|++++.+++.++.+++. +....+..+.... +..... .
T Consensus 67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~-~~~~~~--~ 141 (227)
T d1g8aa_ 67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP-EEYRAL--V 141 (227)
T ss_dssp CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG-GGGTTT--C
T ss_pred cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc-cccccc--c
Confidence 3457899999999997 45888888888876 4899999999988777642 2222222222111 111111 1
Q ss_pred CCccEEEECCChh-----hHHHhhhccccCCEEEEE
Q 024011 207 KGVDVILDCMGAS-----YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 207 ~~~d~vi~~~g~~-----~~~~~~~~l~~~g~~v~~ 237 (274)
..+|+++...... .+..+.+.|+++|+++++
T Consensus 142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~ 177 (227)
T d1g8aa_ 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence 3478887654321 256677889999998875
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=95.09 E-value=0.0088 Score=46.76 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=39.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+|||+|++|-+|..+++.+...|. ++.++++... +. .|..+.+ .+.+......+|+||++++.
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------~~----~Dl~~~~---~~~~~i~~~~~D~Vih~Aa~ 64 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------FC----GDFSNPK---GVAETVRKLRPDVIVNAAAH 64 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------SC----CCTTCHH---HHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------cc----CcCCCHH---HHHHHHHHcCCCEEEEeccc
Confidence 599999999999999999888775 4444443321 11 1222222 22222222247999999873
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.08 E-value=0.036 Score=37.18 Aligned_cols=42 Identities=21% Similarity=0.223 Sum_probs=36.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+.....++++++|.|+ |.+|.-.+..+++.|.+|.++.+.+.
T Consensus 15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 4455678899999997 99999999999999999999997654
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.03 E-value=0.036 Score=37.44 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=49.2
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+++...-..+++++|.|+ |.+|.-+++.+++.|.+|.++.+.+.-+ +. .-+.+..+.+.+.....|++
T Consensus 21 i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~l------~~-----~~d~~~~~~~~~~l~~~gv~ 88 (123)
T d1nhpa2 21 LKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRPL------GV-----YLDKEFTDVLTEEMEANNIT 88 (123)
T ss_dssp HHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT------TT-----TCCHHHHHHHHHHHHTTTEE
T ss_pred HHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCccc------cc-----ccchhhHHHHHHHhhcCCeE
Confidence 334444456789999997 9999999999999999999998765321 00 01233445555555556677
Q ss_pred EEEEC
Q 024011 211 VILDC 215 (274)
Q Consensus 211 ~vi~~ 215 (274)
+..++
T Consensus 89 ~~~~~ 93 (123)
T d1nhpa2 89 IATGE 93 (123)
T ss_dssp EEESC
T ss_pred EEeCc
Confidence 76653
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=94.96 E-value=0.011 Score=48.07 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=25.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEE-EEe
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVF-VTA 171 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~-~~~ 171 (274)
+|||+|++|-+|..++..+...|.+++ +++
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d 32 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 699999999999999999999999654 444
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.93 E-value=0.0091 Score=40.62 Aligned_cols=64 Identities=16% Similarity=0.107 Sum_probs=44.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
+..++++|.|+ |-+|.-.++.++++|.+|.++.+++.-+. ..+.+..+.+.+.....|+++..+
T Consensus 23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l~------------~~d~~~~~~l~~~l~~~GI~i~~~ 86 (123)
T d1dxla2 23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIVP------------TMDAEIRKQFQRSLEKQGMKFKLK 86 (123)
T ss_dssp SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSST------------TSCHHHHHHHHHHHHHSSCCEECS
T ss_pred ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccCc------------hhhhcchhhhhhhhhcccceEEcC
Confidence 34588999997 99999999999999999999998754321 112334444555444456666654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.92 E-value=0.09 Score=39.80 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=60.8
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCCcHHHHHHHHhCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (274)
.....++.++||=.|++ .|..+..+++ .|++|++++.+++-++.+++ .+.. .....+..++ .-..
T Consensus 35 ~~~~~~~~~~iLDiGcG--tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l-------~~~~ 104 (251)
T d1wzna1 35 KEDAKREVRRVLDLACG--TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-------AFKN 104 (251)
T ss_dssp HHTCSSCCCEEEEETCT--TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-------CCCS
T ss_pred HHhcCCCCCEEEEeCCC--CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc-------cccc
Confidence 44456778899999973 4777666655 68999999999988777653 2322 2233232221 1124
Q ss_pred CccEEEECCChh----------hHHHhhhccccCCEEEE
Q 024011 208 GVDVILDCMGAS----------YFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 208 ~~d~vi~~~g~~----------~~~~~~~~l~~~g~~v~ 236 (274)
.+|+|+...+.- .+..+.+.|+++|.++.
T Consensus 105 ~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 105 EFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp CEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 599988754321 24566788999998876
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.91 E-value=0.12 Score=38.96 Aligned_cols=70 Identities=17% Similarity=0.225 Sum_probs=52.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
-.|++++|.|- |.+|..+++++...|+++++++.+...++.+. ..+...+ +. ++ .+ ...+|+++=|+
T Consensus 37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~--~~-------~~-~~~cDIl~PcA 104 (230)
T d1leha1 37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-AP--NA-------IY-GVTCDIFAPCA 104 (230)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CG--GG-------TT-TCCCSEEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CC--cc-------cc-cccccEecccc
Confidence 46999999996 99999999999999999999998888876665 3454332 11 11 11 23489998888
Q ss_pred Chh
Q 024011 217 GAS 219 (274)
Q Consensus 217 g~~ 219 (274)
-..
T Consensus 105 ~~~ 107 (230)
T d1leha1 105 LGA 107 (230)
T ss_dssp CSC
T ss_pred ccc
Confidence 653
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.91 E-value=0.0073 Score=47.71 Aligned_cols=96 Identities=17% Similarity=0.147 Sum_probs=60.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC------EEEeCCCCcHHHHHHHHhC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD------VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~------~~~~~~~~~~~~~~~~~~~ 205 (274)
+.+++++||=.|+ |.|..+..++++ |++|+.++.+++-++.+++ .+.. ...+. ++...-.+...
T Consensus 53 ~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 126 (292)
T d1xvaa_ 53 RQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVPA 126 (292)
T ss_dssp HHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSCC
T ss_pred hhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccCC
Confidence 3456789999986 567777777764 8999999999998777653 1211 11111 12111122223
Q ss_pred CCCccEEEECCCh---------------hhHHHhhhccccCCEEEEE
Q 024011 206 GKGVDVILDCMGA---------------SYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 206 ~~~~d~vi~~~g~---------------~~~~~~~~~l~~~g~~v~~ 237 (274)
...+|.|+..... ..+..+.+.|+++|.+++-
T Consensus 127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 173 (292)
T d1xvaa_ 127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 173 (292)
T ss_dssp TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence 3468988864321 1356777889999998863
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.89 E-value=0.013 Score=42.84 Aligned_cols=35 Identities=9% Similarity=0.023 Sum_probs=31.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~ 175 (274)
+++|+|.|| |..|+.++..|++.|+ .|.++.+++.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 688999997 9999999999999999 4888887654
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=94.86 E-value=0.013 Score=41.29 Aligned_cols=80 Identities=10% Similarity=0.095 Sum_probs=49.1
Q ss_pred EEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHH
Q 024011 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 223 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~ 223 (274)
-+.|. |.+|.+.++.++..+..+.+..|+.++.+.+.+.+.....+..+ .. ...|+||-+.....+..
T Consensus 3 gfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~---------~~--~~~DiVil~v~d~~i~~ 70 (153)
T d2i76a2 3 NFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEK---------HP--ELNGVVFVIVPDRYIKT 70 (153)
T ss_dssp EEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCC---------CC--C---CEEECSCTTTHHH
T ss_pred EEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhh---------hh--ccCcEEEEeccchhhhH
Confidence 46785 99999999887664444467899999998887665443222111 01 23688888887766777
Q ss_pred hhhccccCCEEE
Q 024011 224 NLGSLNIDGRLF 235 (274)
Q Consensus 224 ~~~~l~~~g~~v 235 (274)
.++.++..++++
T Consensus 71 v~~~l~~~~~iv 82 (153)
T d2i76a2 71 VANHLNLGDAVL 82 (153)
T ss_dssp HHTTTCCSSCCE
T ss_pred HHhhhcccceee
Confidence 777776555443
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=94.86 E-value=0.21 Score=35.04 Aligned_cols=93 Identities=19% Similarity=0.145 Sum_probs=55.6
Q ss_pred CEEEEecCCchHHH-HHHHHHHHcCC-eEEEEe-cChh--hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGT-FAIQMGKCQGV-RVFVTA-GSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~-~~~~~~~~~g~-~v~~~~-~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-++.|.| +|.+|. ...++++.... +++++. |+.+ ...++++++..... +..+.+.+.....++|+||++
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~-----~~~d~l~~~~~~~~iDiVf~A 78 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-----AGVEGLIKLPEFADIDFVFDA 78 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-----SHHHHHHHSGGGGGEEEEEEC
T ss_pred cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc-----cceeeeeecccccccCEEEEc
Confidence 3688999 599986 56778776654 676664 4543 34566777765532 223344433222359999998
Q ss_pred CChh-hHH--HhhhccccCCEEEEEec
Q 024011 216 MGAS-YFQ--RNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 216 ~g~~-~~~--~~~~~l~~~g~~v~~g~ 239 (274)
+... ... ...+.++.+-.+++...
T Consensus 79 Tpag~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 79 TSASAHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp SCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred CCchhHHHhHHHHHHHHcCCEEEEccc
Confidence 7642 333 33445655556666654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.81 E-value=0.013 Score=39.37 Aligned_cols=35 Identities=17% Similarity=0.052 Sum_probs=31.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++++|.|+ |.+|.-+++.+++.|.+|.++.+.+.
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence 478999997 99999999999999999999998754
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.76 E-value=0.016 Score=45.19 Aligned_cols=34 Identities=24% Similarity=0.153 Sum_probs=30.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
+|+|+|+|| |..|+.++..|++.|.+|.++.+++
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 688999997 9999999999999999999998653
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.74 E-value=0.065 Score=42.76 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=62.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHH-hCCCCc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEE-TGGKGV 209 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (274)
.+++|++||=.++ +.|...+.+++. |+ +|+.++.+++.++.+++ .|..........+..+.+... ..+..|
T Consensus 142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~f 218 (324)
T d2as0a2 142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF 218 (324)
T ss_dssp GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCC
Confidence 3678999987765 445555555554 65 89999999998877753 343211111122333333322 233569
Q ss_pred cEEEECCCh----------------hhHHHhhhccccCCEEEEEecCC
Q 024011 210 DVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 210 d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|+|+-.... ..+..+++.++++|.++.+....
T Consensus 219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~ 266 (324)
T d2as0a2 219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 266 (324)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 999864331 02456678899999999886443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=94.69 E-value=0.085 Score=42.80 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=26.9
Q ss_pred CCEEEEecCCchHHHHHHHHH-HHcCCeEEEEe
Q 024011 140 GESFLVHGGSSGIGTFAIQMG-KCQGVRVFVTA 171 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~-~~~g~~v~~~~ 171 (274)
+.+|||+|++|-+|..++..+ +..|.+|++++
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D 34 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence 467999999999998877655 56799999986
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.67 E-value=0.012 Score=40.07 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=31.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++++|.|+ |.+|.-++..+++.|.+|.++.+++.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 478999997 99999999999999999999998753
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.65 E-value=0.025 Score=41.41 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=34.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~ 180 (274)
++|.|.|+ |-+|..++.++...|++|.+.+++++.++..
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence 56899997 9999999999999999999999998876544
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.57 E-value=0.081 Score=39.59 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=67.9
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHH---HhC
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKE---ETG 205 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~---~~~ 205 (274)
.+....++||-+|. +.|+.++.++... +.+++.++.+++..+.++ +.|....+.....+..+.+.+ ...
T Consensus 55 ~~~~~~k~vLEiGt--~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~ 132 (219)
T d2avda1 55 ARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGE 132 (219)
T ss_dssp HHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTC
T ss_pred HHccCCCeEEEEec--hhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcc
Confidence 34455689999985 6788888888865 569999999988766654 344322222222233333332 223
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
...+|+||--+.. ..++.+++.++++|-++.=+...
T Consensus 133 ~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~l~ 172 (219)
T d2avda1 133 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLW 172 (219)
T ss_dssp TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred cCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCCcc
Confidence 3459988766543 23678899999999998766654
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=94.54 E-value=0.12 Score=39.74 Aligned_cols=95 Identities=11% Similarity=0.084 Sum_probs=66.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
..++.+||=.|+ |.|..+..+++.. +.+++.++.+++.++.+++...... ...+..++ -.....+|+|+.
T Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l------~~~~~sfD~v~~ 153 (268)
T d1p91a_ 82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL------PFSDTSMDAIIR 153 (268)
T ss_dssp CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC------SBCTTCEEEEEE
T ss_pred CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhc------cCCCCCEEEEee
Confidence 456788988886 5577777777765 6799999999998888876443322 22222221 112345999997
Q ss_pred CCChhhHHHhhhccccCCEEEEEec
Q 024011 215 CMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 215 ~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
...-..+.+..+.|+++|.++....
T Consensus 154 ~~~~~~~~e~~rvLkpgG~l~~~~p 178 (268)
T d1p91a_ 154 IYAPCKAEELARVVKPGGWVITATP 178 (268)
T ss_dssp ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHhCCCcEEEEEee
Confidence 6655567888999999999998754
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.53 E-value=0.028 Score=38.03 Aligned_cols=63 Identities=21% Similarity=0.151 Sum_probs=44.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..++++|.|+ |.+|.-.++.+++.|.+|.++.++ .-+ . ..+.+..+.+.+....+|+++..++
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~-~~l---~---------~~D~~~~~~l~~~l~~~Gv~i~~~~ 81 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS-ILL---R---------GFDQDMANKIGEHMEEHGIKFIRQF 81 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS-SSS---T---------TSCHHHHHHHHHHHHHTTEEEEESC
T ss_pred CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec-hhh---c---------cCCHHHHHHHHHHHHHCCCEEEECC
Confidence 3467999997 999999999999999999999864 211 1 1223345555555555667776653
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.50 E-value=0.038 Score=37.23 Aligned_cols=67 Identities=21% Similarity=0.302 Sum_probs=47.5
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++++++++|.|+ |.+|.-++..+++.|.+|.++.+++.-+.. ..+....+.+.+.....|+++..+.
T Consensus 27 ~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l~~-----------~~~~~~~~~~~~~l~~~GV~i~~~~ 93 (121)
T d1d7ya2 27 LRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLMSR-----------AAPATLADFVARYHAAQGVDLRFER 93 (121)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------TSCHHHHHHHHHHHHTTTCEEEESC
T ss_pred hhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccccc-----------cCCHHHHHHHHHHHHHCCcEEEeCC
Confidence 567899999997 999999999999999999999987642210 1122334455555555667766653
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.47 E-value=0.08 Score=39.31 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=61.3
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
...++||++||=.|++. |..+..++...+ .+|++++.+++.++.+++ .+-...+..+..+. ..... ....
T Consensus 51 ~l~lkpg~~VLDlGcG~--G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~-~~~~~--~~~~ 125 (209)
T d1nt2a_ 51 RLKLRGDERVLYLGAAS--GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP-WKYSG--IVEK 125 (209)
T ss_dssp CCCCCSSCEEEEETCTT--SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG-GGTTT--TCCC
T ss_pred cCCCCCCCEEEEeCCcC--CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCc-ccccc--ccce
Confidence 45789999999999844 666677776654 389999999988776642 33222222222211 00001 1123
Q ss_pred ccEEEECCCh-----hhHHHhhhccccCCEEEEEe
Q 024011 209 VDVILDCMGA-----SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 209 ~d~vi~~~g~-----~~~~~~~~~l~~~g~~v~~g 238 (274)
+|+++..... ..+..+.+.|+++|+++.+-
T Consensus 126 vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 160 (209)
T d1nt2a_ 126 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 160 (209)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence 6777765432 12566678999999998763
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.38 E-value=0.093 Score=40.37 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=62.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCC---CEEEeCCCCcHHHHHHHHhCCCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA---DVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
.+++|++||-.++ |+|...+.+|+...++|++++.+++..+.+++ .+. -.++..+..++ .....
T Consensus 104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~-------~~~~~ 174 (260)
T d2frna1 104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-------PGENI 174 (260)
T ss_dssp HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-------CCCSC
T ss_pred hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh-------ccCCC
Confidence 4688999998886 56777788887755799999999998877752 222 23333333222 22344
Q ss_pred ccEEEEC-CC--hhhHHHhhhccccCCEEEEEe
Q 024011 209 VDVILDC-MG--ASYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 209 ~d~vi~~-~g--~~~~~~~~~~l~~~g~~v~~g 238 (274)
+|.|+-+ .. ...+..+++.++++|.+....
T Consensus 175 ~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~ 207 (260)
T d2frna1 175 ADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN 207 (260)
T ss_dssp EEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence 8866543 22 234778899999999876543
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.36 E-value=0.24 Score=35.32 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=59.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEe-cCh-hhHHHHHHcCCCEEEeCCCCcHHHHHH-----------HHhCCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTA-GSE-EKLAVCKDLGADVCINYKTEDFVARVK-----------EETGGK 207 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~ 207 (274)
+|.|.|- |.||+.+++.+.... .+++.+. .++ +....+.+.+.+...... . ...... +.. .
T Consensus 4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~--~ 78 (172)
T d2czca2 4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASE-E-FIPRFEKEGFEVAGTLNDLL--E 78 (172)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSG-G-GHHHHHHHTCCCSCBHHHHH--T
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccc-c-ceeeecccCccccchhhhhh--c
Confidence 6889996 999999999887654 4666554 333 334555666655433111 1 111111 111 2
Q ss_pred CccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 208 GVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 208 ~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|+|+||+|... .+.+-..++.+-+.+..+...
T Consensus 79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~ 113 (172)
T d2czca2 79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK 113 (172)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 5999999999744 556667788888888887654
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.34 E-value=0.027 Score=43.03 Aligned_cols=35 Identities=34% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
..++|+|.|| |..|++++..+++.|.+|.+.++++
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3578999998 9999999999999999999999754
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=94.27 E-value=0.043 Score=36.39 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=32.7
Q ss_pred CCCC-CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 137 LSPG-ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 137 ~~~g-~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+.++ .+|.|.|+ |-+|+++++.++++|+++++.+.+++
T Consensus 7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~ 45 (111)
T d1kjqa2 7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD 45 (111)
T ss_dssp TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 3444 56999996 99999999999999999999997765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.22 E-value=0.065 Score=38.74 Aligned_cols=78 Identities=13% Similarity=0.043 Sum_probs=49.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHHHHcCC---------CEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGA---------DVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+|.|.|+ |.+|.+++..+...|.+|.++.|+.+ ..+.+.+-.. ...+.. ..+. .+... ..|
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~-~~~~----~~~~~--~ad 73 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW-PEQL----EKCLE--NAE 73 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC-GGGH----HHHHT--TCS
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc-cccH----HHHHh--ccc
Confidence 5789997 99999999999999999999998543 3444432111 000111 1222 22222 379
Q ss_pred EEEECCChhhHHHhhhc
Q 024011 211 VILDCMGASYFQRNLGS 227 (274)
Q Consensus 211 ~vi~~~g~~~~~~~~~~ 227 (274)
+|+.+.....+...++.
T Consensus 74 ~Ii~avps~~~~~~~~~ 90 (180)
T d1txga2 74 VVLLGVSTDGVLPVMSR 90 (180)
T ss_dssp EEEECSCGGGHHHHHHH
T ss_pred hhhcccchhhhHHHHHh
Confidence 99999987655554443
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=94.12 E-value=0.22 Score=36.12 Aligned_cols=93 Identities=18% Similarity=0.159 Sum_probs=58.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE-E-eCCCCcHHHHHHHHhCCCCc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I-NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~ 209 (274)
.+++| +||=.|+ |.|..+..+++ .|++|++++.+++.++.++ +.+.+.+ . ..+..++ .....+
T Consensus 28 ~~~~g-rvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-------~~~~~f 96 (198)
T d2i6ga1 28 VVAPG-RTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-------TFDGEY 96 (198)
T ss_dssp TSCSC-EEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-------CCCCCE
T ss_pred cCCCC-cEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-------cccccc
Confidence 34555 7888886 47877776665 5999999999998877664 3343321 1 1111111 112358
Q ss_pred cEEEECCChh---------hHHHhhhccccCCEEEEEec
Q 024011 210 DVILDCMGAS---------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 210 d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g~ 239 (274)
|+|+...--. .+..+.+.++++|.++....
T Consensus 97 D~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 135 (198)
T d2i6ga1 97 DFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA 135 (198)
T ss_dssp EEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9998644321 24556678999999887643
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.07 E-value=0.039 Score=38.49 Aligned_cols=71 Identities=20% Similarity=0.114 Sum_probs=45.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCC---CE-EEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGA---DV-CINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~---~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
+|.|.||+|.+|..++.++...+. ++.+++.++.+.+.+.-... .. .......++.+.+ .+.|+|+-+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~------~~aDivVit 75 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL------KGCDVVVIP 75 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH------TTCSEEEEC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh------CCCCEEEEC
Confidence 588999889999999999998886 78888877655433321111 11 1111223333333 348999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 76 ag~ 78 (144)
T d1mlda1 76 AGV 78 (144)
T ss_dssp CSC
T ss_pred CCc
Confidence 984
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.00 E-value=0.026 Score=38.41 Aligned_cols=37 Identities=22% Similarity=0.145 Sum_probs=32.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+..++++|.|+ |.+|.-+++.++..|.+|.++.+.+.
T Consensus 24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 44689999997 99999999999999999999987653
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.93 E-value=0.088 Score=39.71 Aligned_cols=100 Identities=15% Similarity=0.050 Sum_probs=61.2
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcC----CCEEEeCCCCcHHHHHHHHhCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLG----ADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
+...+++|++||=.|+++ |..+..++... +.+|++++.+++.++.+++.. ....+..+..... .... ...
T Consensus 68 ~~l~ikpG~~VLDlGcGs--G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~-~~~~--~~~ 142 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGASA--GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ-EYAN--IVE 142 (230)
T ss_dssp CCCCCCTTCEEEEESCCS--SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG-GGTT--TCC
T ss_pred HhCCCCCCCEEEEeCEEc--CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc-cccc--ccc
Confidence 445789999999999844 67777777754 349999999999887776432 1122222222211 1111 112
Q ss_pred CccEEEECCChh-----hHHHhhhccccCCEEEEE
Q 024011 208 GVDVILDCMGAS-----YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 208 ~~d~vi~~~g~~-----~~~~~~~~l~~~g~~v~~ 237 (274)
.+|+++...... .+..+.+.|+++|+++++
T Consensus 143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~ 177 (230)
T d1g8sa_ 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence 245565544321 255667789999998876
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=93.89 E-value=0.11 Score=37.17 Aligned_cols=42 Identities=17% Similarity=-0.018 Sum_probs=36.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG 184 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g 184 (274)
+|.|.|. |.+|...+..+...|++|++.+|++++.+.+.+.+
T Consensus 3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence 4778895 99999999999999999999999999988876544
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=93.79 E-value=0.032 Score=43.49 Aligned_cols=73 Identities=21% Similarity=0.296 Sum_probs=43.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-eEEEEe--cChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTA--GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|||+|++|-+|..++..+.+.|. +|++++ .+..+.....+.......+. .+.............++.++..++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK--EDFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH--HHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc--hHHHHHHhhhhcccchhhhhhhcc
Confidence 79999999999999999999997 688775 22222333344433333221 122222222222234678887765
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.78 E-value=0.12 Score=40.23 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~ 171 (274)
.|++++|.|- |.+|..+++.+.+.|++|+.++
T Consensus 35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 5899999996 9999999999999999998876
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.76 E-value=0.044 Score=41.34 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.+.+++|+|.|+ |..|+.++..+++.|++|.++.++++
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 356799999997 99999999999999999999986643
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.72 E-value=0.037 Score=39.77 Aligned_cols=101 Identities=10% Similarity=0.017 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHH--HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVC--KDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
-.|++++|.|.+.-+|.=++.++.+.|+.|..+..+.... ..- ........-+... -..+.+.+... ..|++|.
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lk~~~~--~aDIvIs 103 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGE-YSEDLLKKCSL--DSDVVIT 103 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEE-CCHHHHHHHHH--HCSEEEE
T ss_pred CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccc-cchhHHhhccc--cCCEEEE
Confidence 3589999999988999999999999999998776432110 000 0011111111100 01122333221 2799999
Q ss_pred CCChhhHHHhhhccccCCEEEEEecCC
Q 024011 215 CMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 215 ~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++|.+.+.---++++++..++.+|...
T Consensus 104 avG~p~~~i~~d~ik~GavvIDvGi~~ 130 (171)
T d1edza1 104 GVPSENYKFPTEYIKEGAVCINFACTK 130 (171)
T ss_dssp CCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred ccCCCccccChhhcccCceEeeccccc
Confidence 999765433446788888888888653
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.67 E-value=0.68 Score=33.48 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=64.8
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHH----cCCCE-EEeCCCCcHHHHHHHHhCCC
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADV-CINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~~~~~ 207 (274)
...+++|+++ |.. +.|.|-.+..++... +.+|++++++++.++.+++ ++... .+..+..++.. +....+..
T Consensus 18 ~l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~-~~~~~~~~ 94 (192)
T d1m6ya2 18 FLKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-LLKTLGIE 94 (192)
T ss_dssp HHCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH-HHHHTTCS
T ss_pred hhCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH-HHHHcCCC
Confidence 3467788855 433 455666666666654 5799999999998887764 33332 23333334333 33334445
Q ss_pred CccEEEECCChh----------------hHHHhhhccccCCEEEEEecCC
Q 024011 208 GVDVILDCMGAS----------------YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 208 ~~d~vi~~~g~~----------------~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+|.|+--.|.. .+..+.+.++++|+++++....
T Consensus 95 ~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s 144 (192)
T d1m6ya2 95 KVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHS 144 (192)
T ss_dssp CEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred CcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecccc
Confidence 688775444421 2356677899999999887654
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=93.66 E-value=0.035 Score=34.16 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=30.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
++|.|.|+ |-+|++.++.++.+|.++.+.+.+++
T Consensus 2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~ 35 (78)
T d3etja2 2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE 35 (78)
T ss_dssp EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 57999997 99999999999999999999986544
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.58 E-value=0.088 Score=35.96 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=34.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++++++++|.|+ |.+|.-++..+++.|.+|.++.+.+.
T Consensus 31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence 4567899999997 99999999999999999999997654
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=93.54 E-value=0.12 Score=38.78 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=67.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHHHh----C
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEET----G 205 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~----~ 205 (274)
+....++||-+|. +.|+.++.++... +.+++.++.+++..+.++ +.|...-+.....+..+.+.+.. .
T Consensus 56 ~~~~~k~iLEiGT--~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~ 133 (227)
T d1susa1 56 KLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKN 133 (227)
T ss_dssp HHHTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGG
T ss_pred HhcCCCcEEEecc--hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhcccc
Confidence 3445689999984 6788888888765 469999999988776665 34543222222223333333321 2
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
...||.||--+.. ..++.+++.++++|.++.=+...
T Consensus 134 ~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNvl~ 173 (227)
T d1susa1 134 HGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLW 173 (227)
T ss_dssp TTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETTTG
T ss_pred CCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccCCC
Confidence 3459988764432 24778899999999988776653
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.43 E-value=0.05 Score=42.80 Aligned_cols=38 Identities=24% Similarity=0.156 Sum_probs=33.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.....++|+|+|+ |..|+.++..|++.|.+|.++++++
T Consensus 26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4456789999997 9999999999999999999998654
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.35 E-value=0.37 Score=34.86 Aligned_cols=96 Identities=9% Similarity=0.149 Sum_probs=61.4
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cC--CC--EEEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LG--AD--VCINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g--~~--~~~~~~~~~~~~~~~~~~ 204 (274)
+...+.++++||=.|+ |.|..+..+++ .+.+|++++.++...+.+++ .+ .. .....+..+ ..
T Consensus 46 ~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~-------~~ 115 (194)
T d1dusa_ 46 ENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-------NV 115 (194)
T ss_dssp HHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-------TC
T ss_pred HhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh-------hh
Confidence 5567788999999986 45666666554 57799999999887777653 22 11 222222211 12
Q ss_pred CCCCccEEEECCC----hh----hHHHhhhccccCCEEEEEe
Q 024011 205 GGKGVDVILDCMG----AS----YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 205 ~~~~~d~vi~~~g----~~----~~~~~~~~l~~~g~~v~~g 238 (274)
....+|+|+-+.. .. .+..+.+.|+++|+++++-
T Consensus 116 ~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 157 (194)
T d1dusa_ 116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEEE
Confidence 2345999987532 22 2466778899999987653
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=93.34 E-value=0.36 Score=33.38 Aligned_cols=68 Identities=12% Similarity=0.138 Sum_probs=45.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHH----HH----HcCCCEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAV----CK----DLGADVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~----~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
..+|.|.|+ |.+|..++..+...|. +++++++++++.+- +. ..+...+...+.+ .. .+.
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------~~--~~a 73 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------DC--KDA 73 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------GG--TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------Hh--ccc
Confidence 467889996 9999999998888773 89999988875421 11 1222333222211 11 348
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+|+.++|.
T Consensus 74 divvitag~ 82 (146)
T d1ez4a1 74 DLVVITAGA 82 (146)
T ss_dssp SEEEECCCC
T ss_pred cEEEEeccc
Confidence 999999985
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.33 E-value=0.12 Score=40.95 Aligned_cols=98 Identities=20% Similarity=0.175 Sum_probs=59.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
.+|++||=.++ +.|...+++++ .+.+|+.++.++..++.+++ .|.+ ..+..+..++.+.+.. .+..||+
T Consensus 144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~--~~~~fD~ 218 (318)
T d1wxxa2 144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK--EGERFDL 218 (318)
T ss_dssp CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH--TTCCEEE
T ss_pred hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHh--hhcCCCE
Confidence 46888887765 23444555553 46799999999998877762 3433 2233332233333322 2346998
Q ss_pred EEECCCh----------------hhHHHhhhccccCCEEEEEecC
Q 024011 212 ILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 212 vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
|+-.... .....+++.++++|.++.+.-.
T Consensus 219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 263 (318)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 8864321 0234667889999999887543
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.26 E-value=0.094 Score=39.08 Aligned_cols=96 Identities=22% Similarity=0.173 Sum_probs=63.0
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC----CCE--EEeCCCCcHHHHHHHHhCCCCc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----ADV--CINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g----~~~--~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
...++++||=.|+ |.|..+..+++..+.+|++++.+++-++.+++.. ... ....+..++ ......+
T Consensus 57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~------~~~~~~f 128 (222)
T d2ex4a1 57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF------TPEPDSY 128 (222)
T ss_dssp -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC------CCCSSCE
T ss_pred CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccc------ccccccc
Confidence 3466788999986 6788888888777789999999999888887532 222 122222111 1123458
Q ss_pred cEEEECCChh---------hHHHhhhccccCCEEEEEec
Q 024011 210 DVILDCMGAS---------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 210 d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g~ 239 (274)
|+|+....-. .+..+.+.|+++|.++..-.
T Consensus 129 D~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~ 167 (222)
T d2ex4a1 129 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 167 (222)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence 9998754421 24556678999999987743
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.10 E-value=0.054 Score=37.88 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
.|+++||.|+ |.+|..-+..+...|++|++++.
T Consensus 12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 5899999997 99999999999999999999864
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=92.97 E-value=0.085 Score=39.78 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=31.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+..++|+|.|| |..|++++..+++.|.+|.++++.
T Consensus 4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 44568999997 999999999999999999999864
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.91 E-value=0.48 Score=32.74 Aligned_cols=39 Identities=21% Similarity=0.281 Sum_probs=32.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKL 177 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~ 177 (274)
..+.+|.|.|+ |.+|..++..+...+. ++.++++++++.
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~ 44 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKA 44 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccc
Confidence 35678999997 9999999998888775 799999888763
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.90 E-value=0.081 Score=35.07 Aligned_cols=35 Identities=26% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++++|.|+ |.+|.-+++.+++.|.+|.++.+.+.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 488999997 99999999999999999999987653
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=92.78 E-value=0.042 Score=42.05 Aligned_cols=94 Identities=16% Similarity=0.106 Sum_probs=58.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EE--EeCCCCcHHHHHHHHhCCCCc
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VC--INYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~~~~~~~~~~~ 209 (274)
++++++||=.|+ |.|..+..+++....+|++++.+++.++.+++ .+.. .+ ...+.... .......+
T Consensus 22 ~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-----~~~~~~~f 94 (252)
T d1ri5a_ 22 TKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-----HMDLGKEF 94 (252)
T ss_dssp CCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-----CCCCSSCE
T ss_pred CCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhh-----cccccccc
Confidence 578999999997 34666677766644589999999998877753 3322 21 11111000 01123459
Q ss_pred cEEEECCChhh-----------HHHhhhccccCCEEEEE
Q 024011 210 DVILDCMGASY-----------FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 210 d~vi~~~g~~~-----------~~~~~~~l~~~g~~v~~ 237 (274)
|+|+....... +..+.+.|+++|.++..
T Consensus 95 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 95 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 99987554321 24456789999998864
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=92.64 E-value=0.066 Score=39.48 Aligned_cols=36 Identities=25% Similarity=0.218 Sum_probs=32.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.|+++.|.|. |.||..++++++..|++|++.++...
T Consensus 44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence 3789999996 99999999999999999999987643
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=92.45 E-value=0.41 Score=36.09 Aligned_cols=32 Identities=25% Similarity=0.254 Sum_probs=28.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEec
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAG 172 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~ 172 (274)
+.+|+|.|+ |++|..++..+.+.|. ++.+++.
T Consensus 30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~ 62 (247)
T d1jw9b_ 30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF 62 (247)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 478999997 9999999999999999 7888763
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=92.41 E-value=0.46 Score=35.67 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=30.9
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHH-HcCCeEEEEe
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTA 171 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~ 171 (274)
+.....--.|++++|.|. |.+|..+++.+. ..|++++.++
T Consensus 22 ~~~~~~~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 22 MDVLGIDPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp HHHTTCCTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHcCCCcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEee
Confidence 333333346899999996 999999999884 6799998776
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=92.33 E-value=0.62 Score=33.05 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=56.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEe-cCh-hhHHHHHHcCCCEEEeCCCCcHH-H--------HHHHHhCCCCc
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTA-GSE-EKLAVCKDLGADVCINYKTEDFV-A--------RVKEETGGKGV 209 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~~-~--------~~~~~~~~~~~ 209 (274)
+|.|.|- |.||+.+++.+...+ .+++.+. .++ .....+...+.+........... + ...+.+ .++
T Consensus 3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~--~~v 79 (171)
T d1cf2o1 3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML--DEA 79 (171)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH--HTC
T ss_pred EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh--cCC
Confidence 6889985 999999999887766 4666554 332 23344555555543221110000 0 001111 248
Q ss_pred cEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 210 d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|+|+||+|... .+.+-..++.+-+++..+...
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred CEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 99999999743 455556777777877765543
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=92.29 E-value=0.32 Score=36.99 Aligned_cols=98 Identities=17% Similarity=0.078 Sum_probs=64.4
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC-C-CE--EEeCCCCcHHHHHHHHhCCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-A-DV--CINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~-~~--~~~~~~~~~~~~~~~~~~~~~ 208 (274)
+.....++.++|=.|+ |.|..+..++.....+|.+++.+++-++.+++.. . .. ....+..++ ......
T Consensus 87 ~~l~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~------~~~~~~ 158 (254)
T d1xtpa_ 87 ASLPGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA------TLPPNT 158 (254)
T ss_dssp HTSTTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC------CCCSSC
T ss_pred hhCCCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEcccccc------ccCCCc
Confidence 3344566788888886 6788888888887779999999999888887532 1 21 122221111 112345
Q ss_pred ccEEEECCChh---------hHHHhhhccccCCEEEEEe
Q 024011 209 VDVILDCMGAS---------YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 209 ~d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g 238 (274)
+|+|+..-.-. .+..+.+.|+++|.+++.-
T Consensus 159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e 197 (254)
T d1xtpa_ 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence 99997754421 1456677899999998754
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=92.20 E-value=1.1 Score=30.65 Aligned_cols=94 Identities=20% Similarity=0.122 Sum_probs=58.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+.++|.|. |.+|..+++.+...|.++++++.++++. +.+...+... +..+..+ .+ ..+..+-...|.++-+.
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~v-i~Gd~~d-~~-~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADV-IPGDSND-SS-VLKKAGIDRCRAILALS 79 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEE-EESCTTS-HH-HHHHHTTTTCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEE-EEccCcc-hH-HHHHhccccCCEEEEcc
Confidence 46889997 9999999999999999999999876543 2222334433 3343333 22 22233334589999888
Q ss_pred ChhhH----HHhhhccccCCEEEEEe
Q 024011 217 GASYF----QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 217 g~~~~----~~~~~~l~~~g~~v~~g 238 (274)
+.+.. -...+.+.+.-+++...
T Consensus 80 ~~d~~n~~~~~~~r~~~~~~~iia~~ 105 (153)
T d1id1a_ 80 DNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred ccHHHHHHHHHHHHHhCCCCceEEEE
Confidence 76432 22234455555666543
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.15 E-value=0.23 Score=37.57 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=33.2
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
+.....--.|++|+|.|. |.+|..+++++.+.|++|+.++.
T Consensus 22 ~~~~~~~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 22 AKKLWGGIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp HHHHHSCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence 333333346999999996 99999999999999999987763
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=91.99 E-value=0.049 Score=43.62 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=26.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~ 171 (274)
-++|||+||+|-+|..++..+.+.|..|.++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~ 33 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTV 33 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence 36899999999999999999988887544443
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=91.96 E-value=0.077 Score=41.93 Aligned_cols=26 Identities=23% Similarity=0.262 Sum_probs=23.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRV 167 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v 167 (274)
+|||+|++|-+|..+++.+.+.|..|
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v 27 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPD 27 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCc
Confidence 69999999999999999999888643
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.90 E-value=1.2 Score=30.44 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=31.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~ 180 (274)
+|.|.|. |.+|..++.-+.+.|+++++..++.++....
T Consensus 2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~ 39 (152)
T d1i36a2 2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIE 39 (152)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence 5778886 9999999999999999999988776654433
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=91.80 E-value=0.33 Score=34.82 Aligned_cols=92 Identities=16% Similarity=0.156 Sum_probs=52.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEec-Chh-hHHHHHHcCCCEEEeCCC-----------CcHHHHHHHHhCCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAG-SEE-KLAVCKDLGADVCINYKT-----------EDFVARVKEETGGK 207 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~-~~~-~~~~~~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~ 207 (274)
+|.|.|- |.||+.+++.+..+. .+++.+.. ++. ....+...+.......+. .....++ . .
T Consensus 3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~---~--~ 76 (178)
T d1b7go1 3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDL---I--K 76 (178)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHH---H--H
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhh---h--h
Confidence 5889995 999999999998765 57777643 222 333333333332211110 0001111 1 1
Q ss_pred CccEEEECCChhh-HHHhhhccccCCEEEEEec
Q 024011 208 GVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 208 ~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~ 239 (274)
++|+|+||+|... .+.+-..++.+-+++..+.
T Consensus 77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~ 109 (178)
T d1b7go1 77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG 109 (178)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence 4899999999743 4455556666657766544
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=91.77 E-value=0.14 Score=35.51 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=48.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHc-C---CeEEEEecChhhHHHHHHcCC-CEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ-G---VRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~-g---~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++|.|.||+|-+|+-.++++..+ . .+++...++............ ....+.. +. +.+ .++|++|-+
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~--~~-~~~------~~~DivF~a 72 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAF--DL-EAL------KALDIIVTC 72 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETT--CH-HHH------HTCSEEEEC
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeeccc--ch-hhh------hcCcEEEEe
Confidence 46889999999999999755433 2 366666544332111111111 1111111 11 111 248999999
Q ss_pred CChhhHHHhhhccccCC---EEEEEecC
Q 024011 216 MGASYFQRNLGSLNIDG---RLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~~~~~~~l~~~g---~~v~~g~~ 240 (274)
++..........+...| .++..+..
T Consensus 73 ~~~~~s~~~~~~~~~~g~~~~VID~Ss~ 100 (146)
T d1t4ba1 73 QGGDYTNEIYPKLRESGWQGYWIDAASS 100 (146)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred cCchHHHHhhHHHHhcCCCeecccCCcc
Confidence 99876555555544444 35555544
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=91.71 E-value=0.012 Score=42.07 Aligned_cols=89 Identities=21% Similarity=0.261 Sum_probs=50.2
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCeEEEEecChh-hH--HHHH------HcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEE-KL--AVCK------DLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~-~~--~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
+|.|.|++|-+|+++++.+.+. +++++....++. .. +.+. +.+.... .+.+. .. ..+|+
T Consensus 6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~--~~~~~-------~~--~~~DV 74 (162)
T d1diha1 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ--SSLDA-------VK--DDFDV 74 (162)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEE--SCSTT-------TT--TSCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceee--ccHHH-------Hh--cccce
Confidence 5899999999999999988775 566655432221 10 0000 0111110 00000 01 23678
Q ss_pred EEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 212 vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+||..--......++.....+.=+.+|.++
T Consensus 75 iIDFs~p~~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 75 FIDFTRPEGTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred EEEeccHHHHHHHHHHHHhccceeEEecCC
Confidence 888776555566666666666666677665
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=91.67 E-value=0.38 Score=33.54 Aligned_cols=39 Identities=10% Similarity=-0.008 Sum_probs=31.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL 177 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~ 177 (274)
++..++.|.|+ |.+|..++.++...+. ++++.+.++++.
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~ 44 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMP 44 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence 44578889997 9999998888887775 899998877654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.66 E-value=0.12 Score=40.95 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=31.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++|+|.|| |..|+.++..+.+.|.+|.++.+++.
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 578999997 99999999999999999999987654
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=91.59 E-value=0.051 Score=39.53 Aligned_cols=92 Identities=13% Similarity=0.116 Sum_probs=55.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhh---HHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---LAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+|.|.||+|-+|+-+++++..+.. ++..+..+... ..... .+...... ...... ...-.+.|++|.+.
T Consensus 7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~Dvvf~al 79 (183)
T d2cvoa1 7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLP--NLVAVK-----DADFSNVDAVFCCL 79 (183)
T ss_dssp EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCC--CCBCGG-----GCCGGGCSEEEECC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccc--cchhhh-----hhhhcccceeeecc
Confidence 689999999999999999998864 66655533222 22211 11111000 000000 00013489999999
Q ss_pred ChhhHHHhhhccccCCEEEEEecC
Q 024011 217 GASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 217 g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...........+...+.++.....
T Consensus 80 p~~~s~~~~~~l~~~~~~v~~~~~ 103 (183)
T d2cvoa1 80 PHGTTQEIIKGLPQELKIVDLSAD 103 (183)
T ss_dssp SSSHHHHHHHTSCSSCEEEECSST
T ss_pred ccchHHHHHHHHHhcCcccccchh
Confidence 877666666777788888776544
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=91.52 E-value=0.48 Score=34.99 Aligned_cols=93 Identities=12% Similarity=0.209 Sum_probs=59.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHH---cCCeEEEEecChhhHHHHHH----cCCC--E-EEeCCCCcHHHHHHHHhCC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCKD----LGAD--V-CINYKTEDFVARVKEETGG 206 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~---~g~~v~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~~~~ 206 (274)
++++.+||=.|+ |.|..+..+++. .+++|+.++.+++-++.+++ .+.. . ....+..+ ...
T Consensus 37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~--------~~~ 106 (225)
T d1im8a_ 37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH--------VEI 106 (225)
T ss_dssp CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT--------CCC
T ss_pred cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc--------ccc
Confidence 678899999997 457777777764 57899999999998887764 2221 1 12211111 112
Q ss_pred CCccEEEECCCh---------hhHHHhhhccccCCEEEEEec
Q 024011 207 KGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 207 ~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
..+|+++-+..- ..+..+.+.|+++|.+++.-.
T Consensus 107 ~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~ 148 (225)
T d1im8a_ 107 KNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK 148 (225)
T ss_dssp CSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence 346766554332 125677788999999998643
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.52 E-value=0.59 Score=34.03 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=45.2
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCC-CEEEeCCCCcHHHHHHHHhCCCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
+....++ .|++||=.|+++ |...+. +...|+ +|+.++.+++.++.+++... ......+.. + . ...
T Consensus 41 ~~~~~dl-~Gk~VLDlGcGt--G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~-------~-l-~~~ 107 (197)
T d1ne2a_ 41 IYNDGNI-GGRSVIDAGTGN--GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVS-------E-I-SGK 107 (197)
T ss_dssp HHHHTSS-BTSEEEEETCTT--CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGG-------G-C-CCC
T ss_pred HHHcCCC-CCCEEEEeCCCC--cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEehh-------h-c-CCc
Confidence 3345555 589999988744 444443 444565 79999999998888775332 233333221 1 1 235
Q ss_pred ccEEEECC
Q 024011 209 VDVILDCM 216 (274)
Q Consensus 209 ~d~vi~~~ 216 (274)
+|+||-|-
T Consensus 108 fD~Vi~NP 115 (197)
T d1ne2a_ 108 YDTWIMNP 115 (197)
T ss_dssp EEEEEECC
T ss_pred ceEEEeCc
Confidence 99998764
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.48 E-value=0.074 Score=36.96 Aligned_cols=90 Identities=10% Similarity=0.045 Sum_probs=51.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC---CeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g---~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
-+|.|.||+|-+|+-+++++.+++ .++..+..+...-+.+.....+... +.+..+ -.+.|++|-+.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~----------~~~~d~vf~a~ 72 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFD----------FSSVGLAFFAA 72 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCC----------GGGCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhh----------hccceEEEecC
Confidence 468999999999999999997543 4676665443221111111111110 111111 13489999999
Q ss_pred ChhhHHHhh-hccccCCEEEEEecC
Q 024011 217 GASYFQRNL-GSLNIDGRLFIIGTQ 240 (274)
Q Consensus 217 g~~~~~~~~-~~l~~~g~~v~~g~~ 240 (274)
+........ +....+.++++.+..
T Consensus 73 p~~~s~~~~~~~~~~g~~VID~Ss~ 97 (144)
T d2hjsa1 73 AAEVSRAHAERARAAGCSVIDLSGA 97 (144)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred CcchhhhhccccccCCceEEeechh
Confidence 876544443 445566677766544
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=91.30 E-value=0.41 Score=35.90 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=56.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.++++||=.|++ .|..+..+++ .|.+|+.++.+++.++.+++ .+.. ..+..+..+ ....+.+|+|
T Consensus 36 ~~~~~vLDiGCG--~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD~i 105 (246)
T d1y8ca_ 36 LVFDDYLDLACG--TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN-------LNINRKFDLI 105 (246)
T ss_dssp CCTTEEEEETCT--TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG-------CCCSCCEEEE
T ss_pred CCCCeEEEEeCc--CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhh-------hccccccccc
Confidence 346789999974 4666665554 58899999999998777653 3322 222222111 1123459999
Q ss_pred EECCCh-h----------hHHHhhhccccCCEEEE
Q 024011 213 LDCMGA-S----------YFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 213 i~~~g~-~----------~~~~~~~~l~~~g~~v~ 236 (274)
+...+. . .+..+.+.|+++|.++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 140 (246)
T d1y8ca_ 106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 864332 0 24567778999998885
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=91.21 E-value=0.83 Score=30.40 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=60.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+.++|.|. |.+|..+++.++ +.++++++.++++.+.++..+...+ ..+..+ .+.+.+ .+-...+.++-+...+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i-~Gd~~~-~~~L~~-a~i~~A~~vi~~~~~d~ 74 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFV-HGDPTR-VSDLEK-ANVRGARAVIVNLESDS 74 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEE-ESCTTS-HHHHHH-TTCTTCSEEEECCSSHH
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCcccc-ccccCC-HHHHHH-hhhhcCcEEEEeccchh
Confidence 45889996 899999988875 4567888889988888888776544 344333 233333 33345788888777543
Q ss_pred ----HHHhhhccccCCEEEEEec
Q 024011 221 ----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 221 ----~~~~~~~l~~~g~~v~~g~ 239 (274)
.-...+.+.+..+++....
T Consensus 75 ~n~~~~~~~r~~~~~~~iia~~~ 97 (129)
T d2fy8a1 75 ETIHCILGIRKIDESVRIIAEAE 97 (129)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECS
T ss_pred hhHHHHHHHHHHCCCceEEEEEc
Confidence 2334455667766666543
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.15 E-value=0.16 Score=33.88 Aligned_cols=37 Identities=16% Similarity=0.048 Sum_probs=32.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+.+++++|.|+ |.+|.-+++.+.+.|.+|.++.+++.
T Consensus 30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 34578999997 99999999999999999999987653
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.96 E-value=0.63 Score=36.34 Aligned_cols=97 Identities=21% Similarity=0.232 Sum_probs=53.4
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHH---HHcCC--C-EEEeCCCCcHHHHHHH
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC---KDLGA--D-VCINYKTEDFVARVKE 202 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~---~~~g~--~-~~~~~~~~~~~~~~~~ 202 (274)
++.+.....+|++||-.|++ .|..+..+++ .|+ +|++++.++...... ++.+. . .++..+..++
T Consensus 26 ai~~~~~~~~~~~VLDiGcG--~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l------ 96 (311)
T d2fyta1 26 FIYQNPHIFKDKVVLDVGCG--TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV------ 96 (311)
T ss_dssp HHHHCGGGTTTCEEEEETCT--TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS------
T ss_pred HHHhccccCCcCEEEEECCC--CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh------
Confidence 34444456789999999974 4555554444 576 899999887643222 22222 1 2233332221
Q ss_pred HhCCCCccEEEECC-Ch-----hhHHH----hhhccccCCEEE
Q 024011 203 ETGGKGVDVILDCM-GA-----SYFQR----NLGSLNIDGRLF 235 (274)
Q Consensus 203 ~~~~~~~d~vi~~~-g~-----~~~~~----~~~~l~~~g~~v 235 (274)
......+|+|+... +. ...+. .-+.|+++|+++
T Consensus 97 ~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii 139 (311)
T d2fyta1 97 HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 139 (311)
T ss_dssp CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence 11234589997532 21 11222 235689999887
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=90.93 E-value=0.14 Score=33.92 Aligned_cols=36 Identities=17% Similarity=0.055 Sum_probs=28.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc---CCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~---g~~v~~~~~~~~ 175 (274)
..++++|.|+ |.+|.-+++.+..+ |.+|.++.+++.
T Consensus 17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred cCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence 3588999997 99998888775544 889999987643
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.84 E-value=0.1 Score=40.35 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=29.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.|+|.|| |..|++++..+++.|.+|.+++++++
T Consensus 4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4899997 99999999999999999999998753
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=90.84 E-value=0.16 Score=35.86 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=29.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~ 174 (274)
.|++|+|.|+ |..|..+++.+++.+. +|+++++++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4899999997 9999999999988874 788887654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.82 E-value=0.18 Score=39.47 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=31.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
++..+|+|+|| |-.|+.++..|++.|.+|.+...++
T Consensus 3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 44567999997 9999999999999999999988654
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=90.73 E-value=0.33 Score=36.99 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=33.0
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
+.....--.|++++|.|. |.+|..+++.+...|++|+.+..
T Consensus 27 ~~~~~~~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 27 MKHENDTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp HHHTTCCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHhCCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence 433333346899999996 99999999999999999988753
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.69 E-value=0.27 Score=36.38 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=59.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHH----HcCCC---EEEeCCCCcHHHHHHHHhCCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
.+.++||-+|. +.|..++.+++.. +.+++.++.+++..+.++ ..|.. .....+..+....+.+......
T Consensus 55 ~kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~ 132 (214)
T d2cl5a1 55 YSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT 132 (214)
T ss_dssp HCCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCC
T ss_pred hCCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccc
Confidence 44578999985 5677778888764 679999999888766554 34432 1222333333333444444456
Q ss_pred ccEEEECCChh------hHHHhhhccccCCEEEE
Q 024011 209 VDVILDCMGAS------YFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 209 ~d~vi~~~g~~------~~~~~~~~l~~~g~~v~ 236 (274)
+|+++--.... .+...++.++++|.++.
T Consensus 133 ~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~ 166 (214)
T d2cl5a1 133 LDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA 166 (214)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence 89876543322 13455677899886554
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=90.57 E-value=1.2 Score=30.53 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=29.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhH
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKL 177 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~ 177 (274)
++|.|+|+ |.+|..++..+...|. ++++.+.++++.
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~ 39 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV 39 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence 67889996 9999999988887774 899999888764
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=90.48 E-value=0.26 Score=38.09 Aligned_cols=96 Identities=21% Similarity=0.233 Sum_probs=57.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC-------------CEEEeCCCCcHHHHHHHHh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-------------DVCINYKTEDFVARVKEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~ 204 (274)
.+.++|||.|++ .|..+-.+++....+|.++..+++-.+.+++.-. +.-+.....|....+.+
T Consensus 71 ~~p~~vLiiG~G--~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-- 146 (276)
T d1mjfa_ 71 PKPKRVLVIGGG--DGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-- 146 (276)
T ss_dssp SCCCEEEEEECT--TSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--
T ss_pred CCCceEEEecCC--chHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc--
Confidence 446789999964 3555555566544589999998887777764221 11111112333444433
Q ss_pred CCCCccEEEE-CCCh----------hhHHHhhhccccCCEEEEEe
Q 024011 205 GGKGVDVILD-CMGA----------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 205 ~~~~~d~vi~-~~g~----------~~~~~~~~~l~~~g~~v~~g 238 (274)
.+.+|+||. .... +.+..+.+.|+++|.++.-.
T Consensus 147 -~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~ 190 (276)
T d1mjfa_ 147 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 190 (276)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence 245998865 3221 12456778899999887654
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=90.22 E-value=1.3 Score=30.10 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=28.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKL 177 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~ 177 (274)
++.|.|+ |.+|..++..+...+. ++.+.+.++++.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~ 38 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA 38 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence 4778897 9999998887776664 899999887754
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=90.12 E-value=0.2 Score=38.72 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=60.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcC-----C--CEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG-----A--DVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g-----~--~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
...++|||.|+ |-|..+..+++..+. +|.+++.+++-.+.+++.- . +.-++....|....+.+. ...+
T Consensus 74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~--~~~y 149 (274)
T d1iy9a_ 74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS--ENQY 149 (274)
T ss_dssp SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC--CSCE
T ss_pred CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhc--CCCC
Confidence 34588999986 446777777776654 8999999998877776432 1 110111112333444432 3459
Q ss_pred cEEEECCCh-----------hhHHHhhhccccCCEEEEEe
Q 024011 210 DVILDCMGA-----------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 210 d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g 238 (274)
|+||.-... +....+.+.|+++|.++.-.
T Consensus 150 DvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~ 189 (274)
T d1iy9a_ 150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (274)
T ss_dssp EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence 988743221 12567778999999988654
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=90.10 E-value=0.35 Score=35.88 Aligned_cols=95 Identities=20% Similarity=0.165 Sum_probs=58.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE--EEeCCCCcHHHHHHHHhCCCCcc
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.......+++||=.|+ |.|..+..+ ...|.+|++++.+++.++.+++...+. .+..+..+ ....+.+|
T Consensus 14 ~~~~~~~~~~VLDiGc--G~G~~~~~l-~~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~-------~~~~~~fD 83 (225)
T d2p7ia1 14 AFTPFFRPGNLLELGS--FKGDFTSRL-QEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFED-------AQLPRRYD 83 (225)
T ss_dssp HHGGGCCSSCEEEESC--TTSHHHHHH-TTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGG-------CCCSSCEE
T ss_pred HhhhhCCCCcEEEEeC--CCcHHHHHH-HHcCCeEEEEeCcHHHhhhhhcccccccccccccccc-------cccccccc
Confidence 3334445778998886 457776555 456899999999999988887543322 22222221 11234599
Q ss_pred EEEECCChh-------hHHHhh-hccccCCEEEEE
Q 024011 211 VILDCMGAS-------YFQRNL-GSLNIDGRLFII 237 (274)
Q Consensus 211 ~vi~~~g~~-------~~~~~~-~~l~~~g~~v~~ 237 (274)
+|+-.---. .+.... ++|+++|.++..
T Consensus 84 ~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 84 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence 987533221 134444 578999988875
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=90.09 E-value=0.31 Score=38.34 Aligned_cols=98 Identities=22% Similarity=0.228 Sum_probs=61.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCC-------EEEeCCCCcHHHHHHHHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGAD-------VCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
...++|||.|+ |-|..+-.+++... .+|.++..+++-.+.+++.-.. .-+.....|..+.+++. .+.+
T Consensus 105 ~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~--~~~y 180 (312)
T d2b2ca1 105 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH--KNEF 180 (312)
T ss_dssp SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC--TTCE
T ss_pred CCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhC--CCCC
Confidence 34578999986 44666677777666 4899999999988888763211 00111123445555442 3459
Q ss_pred cEEEECCCh-----------hhHHHhhhccccCCEEEEEec
Q 024011 210 DVILDCMGA-----------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 210 d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
|+||.-.-. ..+..+.+.|+++|.++.-+.
T Consensus 181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~ 221 (312)
T d2b2ca1 181 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 221 (312)
T ss_dssp EEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence 998753321 124566778999999887643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.07 E-value=0.17 Score=33.48 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=42.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC---CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g---~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
+.+++++|.|+ |.+|.-++..+..++ .+|.++.+.+.-+ ...+.+..+.+.+....+|+++..+
T Consensus 18 ~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL------------~~~d~~~~~~l~~~l~~~GV~v~~~ 84 (117)
T d1aoga2 18 EPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMIL------------RGFDHTLREELTKQLTANGIQILTK 84 (117)
T ss_dssp SCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSS------------TTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred hcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhh------------cccchHHHHHHHHHHHhcCcEEEcC
Confidence 34588999997 999988887776654 4798888754321 1122344455555555567777775
Q ss_pred C
Q 024011 215 C 215 (274)
Q Consensus 215 ~ 215 (274)
+
T Consensus 85 ~ 85 (117)
T d1aoga2 85 E 85 (117)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.92 E-value=0.2 Score=41.36 Aligned_cols=31 Identities=23% Similarity=0.286 Sum_probs=27.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEec
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAG 172 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~ 172 (274)
.+|||.|+ ||+|..+++.+...|. ++.+++.
T Consensus 38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~ 69 (426)
T d1yovb1 38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM 69 (426)
T ss_dssp CCEEEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence 56999998 9999999999999999 8888874
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.90 E-value=0.2 Score=38.10 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=28.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~ 175 (274)
.|+|.|| |..|++++..+++.|. +|.+..++++
T Consensus 3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 5899997 9999999999999996 8888887643
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=89.86 E-value=0.16 Score=38.50 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
|+|+|+ |..|++++..|.+.|.+|.++++++.-
T Consensus 7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 789997 999999999999999999999987653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=89.80 E-value=0.16 Score=38.14 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=28.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
|+|.|+ |..|+.++..+.+.|.+|.++++++.
T Consensus 5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 789997 99999999999999999999987643
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=89.75 E-value=0.63 Score=35.79 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=63.2
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHH----cCCCEEE-eCCCCcHHHHHHHHhCC
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCI-NYKTEDFVARVKEETGG 206 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~ 206 (274)
..++.++.+||=.|+ |.|..+..+++.. +.+|+.++.+++.++.+++ .+....+ ..+..++ .-.
T Consensus 22 ~~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-------~~~ 92 (281)
T d2gh1a1 22 VWKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-------ELN 92 (281)
T ss_dssp TSCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-------CCS
T ss_pred HhccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-------ccc
Confidence 345677889998886 4577777777754 5799999999988777653 3332222 2222111 112
Q ss_pred CCccEEEECCChh-------hHHHhhhccccCCEEEEEe
Q 024011 207 KGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 207 ~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g 238 (274)
..+|+|+.+..-. .+..+.+.|+++|++++.-
T Consensus 93 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 3599998765432 2567788999999998765
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.57 E-value=0.37 Score=33.42 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=36.6
Q ss_pred HHHHHHHhhcCCCCCCEEEEe--cCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 126 TVWSTVFMTSHLSPGESFLVH--GGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~--Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+..-.+ ..+..+++.++|. |+ |-+|.-+++.+++.|++|.++.+.+.
T Consensus 27 t~~d~l--~~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 27 TPEQVM--DGKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CHHHHH--HTCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CHHHHh--cCccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 344444 3456778888886 54 88999999999999999999998754
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=89.54 E-value=1.7 Score=29.83 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=30.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL 177 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~ 177 (274)
|..+|.|.|+ |.+|..++.++...+. ++.+.++++++.
T Consensus 2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~ 40 (150)
T d1t2da1 2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP 40 (150)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence 3467889996 9999999888888776 888888877653
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=89.42 E-value=1.4 Score=29.91 Aligned_cols=35 Identities=11% Similarity=0.037 Sum_probs=29.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKL 177 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~ 177 (274)
+|.|+|+ |.+|..++..+...+. ++.+.+.++++.
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~ 38 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP 38 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence 4778897 9999999988888874 899999887764
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=89.28 E-value=1.3 Score=34.73 Aligned_cols=101 Identities=12% Similarity=0.102 Sum_probs=58.9
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH------cCCC--EEEeCCCCcHHHHHHHHhC
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD------LGAD--VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~------~g~~--~~~~~~~~~~~~~~~~~~~ 205 (274)
..+.+|++||=..+ +.|...+..+ ..|+ +|+.++.++..++.+++ +..+ ..+..+..++.+.+.+ .
T Consensus 140 ~~~~~g~~VLdlf~--~~G~~sl~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~--~ 214 (317)
T d2b78a2 140 NGSAAGKTVLNLFS--YTAAFSVAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR--H 214 (317)
T ss_dssp HTTTBTCEEEEETC--TTTHHHHHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH--T
T ss_pred HHhhCCCceeecCC--CCcHHHHHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHh--h
Confidence 35678999986654 2333334333 3576 79999999988877652 2222 2233333333333322 2
Q ss_pred CCCccEEEECCCh----------------hhHHHhhhccccCCEEEEEecC
Q 024011 206 GKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 ~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..||+||--... .....+++.++++|.++.+.-.
T Consensus 215 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs 265 (317)
T d2b78a2 215 HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 265 (317)
T ss_dssp TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3469988753220 1245677889999999887643
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=89.25 E-value=0.49 Score=33.76 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=51.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhh---HHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---LAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+|.|.||+|-+|.-+++++..+.. ++..+..+... +.... .+-....+. ..+. +.+.+ .+|++|-+.
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~--~~~~-~~~~~-----~~dvvf~a~ 74 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILS--EFDP-EKVSK-----NCDVLFTAL 74 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB--CCCH-HHHHH-----HCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccc--ccCH-hHhcc-----ccceEEEcc
Confidence 588999999999999999988754 66666533332 22221 121111111 1222 12211 389999999
Q ss_pred ChhhHHHhhhccccCCEEEEEecC
Q 024011 217 GASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 217 g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+........... .+-++++++..
T Consensus 75 p~~~s~~~~~~~-~~~~VIDlSad 97 (176)
T d1vkna1 75 PAGASYDLVREL-KGVKIIDLGAD 97 (176)
T ss_dssp STTHHHHHHTTC-CSCEEEESSST
T ss_pred ccHHHHHHHHhh-ccceEEecCcc
Confidence 876544444332 45577766543
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=89.22 E-value=0.16 Score=38.93 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=28.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
+|+|+|+ |..|+.++..+++.|.+|.++.+++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4889997 9999999999999999999998753
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=89.08 E-value=0.18 Score=37.71 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=27.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE 174 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~ 174 (274)
.|+|.|| |..|+.++..|++.|. +|.+..+++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3889997 9999999999999997 699988754
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=89.05 E-value=0.21 Score=35.50 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=27.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
|+|.|+ |+.|+.++..+.+.|.++.++.++
T Consensus 4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence 789997 999999999999999999998853
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.92 E-value=0.21 Score=36.95 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=28.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
|+|+|+ |-.|+.++..|.+.|.+|.++.+++
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 788896 9999999999999999999999764
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=88.87 E-value=0.12 Score=37.36 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=29.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+++.|+|.|+ |+.|+.++..+.+.|.+|+++.+.
T Consensus 4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence 3567999997 999999999999999999998754
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.86 E-value=2.1 Score=33.49 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=65.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-eEEEEecChhhHHHH----HHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~-~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
+..+++.|+|+ |..+...++.+.. +.. +|.+.+|++++.+.+ +..+.....+. .+.+ .+.|+
T Consensus 123 ~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-----~~a~------~~aDi 190 (320)
T d1omoa_ 123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-----AEEA------SRCDV 190 (320)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-----HHHH------TSSSE
T ss_pred CCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-----hhhh------ccccE
Confidence 44578999996 8888777776654 454 899999998876544 34554443321 1222 24899
Q ss_pred EEECCChhhHHHhhhccccCCEEEEEecCCCCccccchh
Q 024011 212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250 (274)
Q Consensus 212 vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 250 (274)
|+-+..+..---..+.++++-.++.+|...-.+..++..
T Consensus 191 V~taT~s~~P~~~~~~l~~G~hv~~iGs~~p~~~Eld~~ 229 (320)
T d1omoa_ 191 LVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVE 229 (320)
T ss_dssp EEECCCCSSCCBCGGGCCTTCEEEECSCCSTTCCCBCHH
T ss_pred EEEeccCcccccchhhcCCCCeEeecCCccccccccCHH
Confidence 998876532111235789999999999876444455543
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=88.66 E-value=0.32 Score=38.28 Aligned_cols=96 Identities=21% Similarity=0.214 Sum_probs=58.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcC------C--CEEEeCCCCcHHHHHHHHhCCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG------A--DVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g------~--~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
...++|||.|+ |.|..+-++++... .+|.++..+++-.+.+++.- . +.-+.....|..+.+.+ . ...
T Consensus 76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~-~-~~~ 151 (312)
T d1uira_ 76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-T-EER 151 (312)
T ss_dssp SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-C-CCC
T ss_pred CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhh-c-CCc
Confidence 34588999996 44666777777654 59999999998877776421 0 00011112344444543 2 345
Q ss_pred ccEEEE-C---CCh----------hhHHHhhhccccCCEEEEE
Q 024011 209 VDVILD-C---MGA----------SYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 209 ~d~vi~-~---~g~----------~~~~~~~~~l~~~g~~v~~ 237 (274)
+|+||. . .+. +.+..+.+.|+++|.++.-
T Consensus 152 yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~ 194 (312)
T d1uira_ 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (312)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence 998864 2 121 1245677889999988764
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.65 E-value=0.24 Score=38.52 Aligned_cols=98 Identities=23% Similarity=0.254 Sum_probs=59.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCC-------CEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGA-------DVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
...++|||.|+ |-|..+-.+++..+ .++.++..+++-.+.+++.-. +.-++....|..+.+.+ . ...+
T Consensus 77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~-~~~y 152 (285)
T d2o07a1 77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-N-QDAF 152 (285)
T ss_dssp SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-C-SSCE
T ss_pred cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhc-C-CCCC
Confidence 34588999986 34666667776654 489999999887777764321 10011112344444443 2 3459
Q ss_pred cEEEECCCh-----------hhHHHhhhccccCCEEEEEec
Q 024011 210 DVILDCMGA-----------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 210 d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
|+||.-.-. ..+..+.+.|+++|.++.-..
T Consensus 153 DvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~ 193 (285)
T d2o07a1 153 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 193 (285)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEecc
Confidence 988643221 124567788999999887643
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=88.54 E-value=1.6 Score=30.65 Aligned_cols=96 Identities=14% Similarity=0.233 Sum_probs=57.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEec---ChhhHHHHHHc----C---CCEE-------Ee------CCCCcHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDL----G---ADVC-------IN------YKTEDFVA 198 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~----g---~~~~-------~~------~~~~~~~~ 198 (274)
+|.|.|- |.+|+++.+.+...+.+++.+-. +.+.+..+-++ | .+.. ++ ....+. +
T Consensus 2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p-~ 79 (169)
T d1dssg1 2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP-E 79 (169)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG-G
T ss_pred eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh-H
Confidence 4789995 99999999999888888777653 23344444331 1 1111 11 011111 1
Q ss_pred HHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++. +...++|+|++|+|... .+.+...+..+.+-+++..+.
T Consensus 80 ~i~--W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~ 121 (169)
T d1dssg1 80 NIP--WSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121 (169)
T ss_dssp GCC--HHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred HCC--ccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence 110 11235999999999743 566677788787777776654
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=88.36 E-value=0.23 Score=36.47 Aligned_cols=31 Identities=16% Similarity=0.153 Sum_probs=27.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
++|+|+ |+.|+.++..+.+.|.+|.++++.+
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 678897 9999999999999999999998653
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=88.31 E-value=0.25 Score=35.07 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=27.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~ 171 (274)
.+++|+|.|+ |.+|.-++..+++.|.++.++.
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~ 33 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL 33 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence 5789999997 9999999999999998755544
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.30 E-value=0.39 Score=35.05 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=35.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (274)
+|.|+|. |-+|..++..+...|.+|++++.++++.+.+.+
T Consensus 2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~ 41 (202)
T d1mv8a2 2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ 41 (202)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence 5788896 999999999999999999999999998887764
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.09 E-value=0.29 Score=38.14 Aligned_cols=97 Identities=19% Similarity=0.205 Sum_probs=60.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcC---------CCEEEeCCCCcHHHHHHHHhCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG---------ADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
...++|||.|+ |-|..+-.+++..+. ++.+++.+++-.+.+++.- ....+ ...|..+.+.+.. .+
T Consensus 79 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i--~~~Da~~~l~~~~-~~ 153 (290)
T d1xj5a_ 79 PNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNL--VIGDGVAFLKNAA-EG 153 (290)
T ss_dssp SCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEE--EESCHHHHHHTSC-TT
T ss_pred CCCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEE--EEccHHHHHhhcc-cc
Confidence 34578999996 346666677776665 8999999998887776532 11111 1123344454432 34
Q ss_pred CccEEEECCCh-----------hhHHHhhhccccCCEEEEEec
Q 024011 208 GVDVILDCMGA-----------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 208 ~~d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
.+|+||.-.-. +.+..+.+.|+++|.++.-..
T Consensus 154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~ 196 (290)
T d1xj5a_ 154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 196 (290)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence 69977643221 124667788999999887643
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=88.00 E-value=1.5 Score=35.33 Aligned_cols=55 Identities=22% Similarity=0.198 Sum_probs=42.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---ChhhHHHHHHcCCCEEEeC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++++ |...+|..|.+++..++..|.+++++.. ++++.+.++.+|++.+...
T Consensus 140 ~~~~g~~V-VeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~ 197 (382)
T d1wkva1 140 RVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDP 197 (382)
T ss_dssp TSCTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred ccCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecC
Confidence 46677654 5566799999999999999998777653 4556777888998877643
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=87.95 E-value=0.26 Score=37.48 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=28.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
-|+|+|+ |.+|.+++..|.+.|.+|+++++.+
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3889997 9999999999999999999998753
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.94 E-value=0.33 Score=37.27 Aligned_cols=100 Identities=19% Similarity=0.151 Sum_probs=56.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH----c---CCeEEEEecChhhHHHHHHc-C-----CCEEEeCCCCcHHHH---HH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKC----Q---GVRVFVTAGSEEKLAVCKDL-G-----ADVCINYKTEDFVAR---VK 201 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~----~---g~~v~~~~~~~~~~~~~~~~-g-----~~~~~~~~~~~~~~~---~~ 201 (274)
+++-+||=.|++ .|..+..+++. . +.++++++.++..++.+++. . ....++.....+.+. ..
T Consensus 39 ~~~~~VLDiGcG--~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (280)
T d1jqea_ 39 KSEIKILSIGGG--AGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML 116 (280)
T ss_dssp CSEEEEEEETCT--TSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred CCCCeEEEEcCC--CCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence 444478888874 45444444432 1 34678888888887777642 1 122222223232221 11
Q ss_pred HHhCCCCccEEEECCChh-------hHHHhhhccccCCEEEEEec
Q 024011 202 EETGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~ 239 (274)
.......+|+|+-...-. .+..+.+.|+++|.++..-.
T Consensus 117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~ 161 (280)
T d1jqea_ 117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV 161 (280)
T ss_dssp TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence 222345699998755421 35677889999998887754
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.72 E-value=2.7 Score=29.61 Aligned_cols=80 Identities=11% Similarity=0.021 Sum_probs=45.8
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCeEEEE-ecChhhHHHH-HHcCCC---EEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVT-AGSEEKLAVC-KDLGAD---VCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~-~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++.|.|+ |.+|...++.++.. +++++.+ ++++++.+.+ ++++.. ... .++.+ +.+ ...+|+|+.+
T Consensus 3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~-ll~---~~~iD~v~I~ 73 (184)
T d1ydwa1 3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYES-LLE---DPEIDALYVP 73 (184)
T ss_dssp EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHH-HHH---CTTCCEEEEC
T ss_pred EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHHH-hhh---ccccceeeec
Confidence 5788996 88998888878776 5677754 6777766554 344431 221 12222 222 2347888877
Q ss_pred CChhh-HHHhhhcccc
Q 024011 216 MGASY-FQRNLGSLNI 230 (274)
Q Consensus 216 ~g~~~-~~~~~~~l~~ 230 (274)
+.... .+.+..+++.
T Consensus 74 tp~~~h~~~~~~~l~~ 89 (184)
T d1ydwa1 74 LPTSLHVEWAIKAAEK 89 (184)
T ss_dssp CCGGGHHHHHHHHHTT
T ss_pred ccchhhcchhhhhhhc
Confidence 76532 4444444443
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=87.63 E-value=0.42 Score=33.28 Aligned_cols=92 Identities=17% Similarity=0.119 Sum_probs=53.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC---eEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~---~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
|=+|.|.||+|-+|.-+++++..+.+ ++.....+...-+.......... .+..+.++ ...|+++-+
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~----------~~~d~~f~~ 70 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAF----------EGVDIALFS 70 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTT----------TTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhh----------hhhhhhhhc
Confidence 34789999999999999999998854 44444422211111101111111 11111111 247899998
Q ss_pred CChhhH-HHhhhccccCCEEEEEecCC
Q 024011 216 MGASYF-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 216 ~g~~~~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.... ....+....+-++++.+...
T Consensus 71 ~~~~~s~~~~~~~~~~~~~VIDlSsdf 97 (154)
T d2gz1a1 71 AGSSTSAKYAPYAVKAGVVVVDNTSYF 97 (154)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred cCccchhhHHhhhccccceehhcChhh
Confidence 887553 34445667777888887654
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=87.60 E-value=2.5 Score=29.33 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=32.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKL 177 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~ 177 (274)
.+..+|.|.|+ |.+|..++..+...|. +++++++++++.
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a 58 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKL 58 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence 34568999997 9999999999999887 899999887654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=87.60 E-value=2.7 Score=28.46 Aligned_cols=32 Identities=16% Similarity=0.074 Sum_probs=26.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--eEEEEecC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGS 173 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~ 173 (274)
+|.|.|++|.+|..++..+...+. ++.+.+..
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~ 35 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP 35 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence 578999889999999999988876 78888753
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.57 E-value=2.2 Score=33.25 Aligned_cols=57 Identities=21% Similarity=0.345 Sum_probs=43.0
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe---cChhhHHHHHHcCCCEEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~---~~~~~~~~~~~~g~~~~~ 189 (274)
+...++++...+|...+|..|.+++..++..|.+++++. .++.+++.++.+|++.+.
T Consensus 57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~ 116 (320)
T d1z7wa1 57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVL 116 (320)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEE
Confidence 445566666677777889999999999999999776665 345567777888876554
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=87.55 E-value=0.71 Score=37.24 Aligned_cols=93 Identities=22% Similarity=0.213 Sum_probs=60.5
Q ss_pred ecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH---c-CCC--------EE------EeCCCCcHHHHHHHHhCC
Q 024011 146 HGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD---L-GAD--------VC------INYKTEDFVARVKEETGG 206 (274)
Q Consensus 146 ~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~---~-g~~--------~~------~~~~~~~~~~~~~~~~~~ 206 (274)
..+.++.|...++++++.|. +|++.+.+++..+.+++ + +.. .. +.....+....+.+ .+
T Consensus 50 LD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~--~~ 127 (375)
T d2dula1 50 LDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE--RH 127 (375)
T ss_dssp EESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH--ST
T ss_pred EEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHh--hc
Confidence 34456778888999998887 89999999998887763 1 111 11 11111232222222 23
Q ss_pred CCccEE-EECCCh--hhHHHhhhccccCCEEEEEecC
Q 024011 207 KGVDVI-LDCMGA--SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~v-i~~~g~--~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
..||+| +|.-|+ +.++.+++.++.+|-+......
T Consensus 128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaTD 164 (375)
T d2dula1 128 RYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTATD 164 (375)
T ss_dssp TCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEecC
Confidence 458965 888886 4589999999998888777544
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=87.49 E-value=0.43 Score=34.41 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=31.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.++++.|.|. |.+|..++++++..|++|+..++..
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d1sc6a1 43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN 77 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence 5789999996 9999999999999999999998754
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=87.46 E-value=0.31 Score=35.73 Aligned_cols=30 Identities=17% Similarity=0.311 Sum_probs=27.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
++|+|+ |..|+.++..+.+.|.+|.++.+.
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 688897 999999999999999999999864
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=87.32 E-value=3.4 Score=31.52 Aligned_cols=56 Identities=20% Similarity=0.373 Sum_probs=40.6
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---ChhhHHHHHHcCCCEEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCI 189 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~ 189 (274)
+....++++++ |...+|..|.+++..++..|.+++++.. ++.+.+.++.+|+..++
T Consensus 53 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 111 (292)
T d2bhsa1 53 KRGEIKPGDVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELIL 111 (292)
T ss_dssp HTTSCCTTSEE-EEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEE
T ss_pred HhCCcCCCcee-eeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcce
Confidence 34445556655 5555799999999999999997766653 45567778888887554
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.18 E-value=0.61 Score=30.87 Aligned_cols=90 Identities=16% Similarity=0.061 Sum_probs=51.0
Q ss_pred CCCEEEEecCCchH-----------HHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGI-----------GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~i-----------G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
..+++||.|+ |+. +..+++.+++.|++++.+..+++....-... ++++. -++-..+.+.+....+
T Consensus 3 ~~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~-aD~lY--feplt~e~v~~Ii~~E 78 (121)
T d1a9xa4 3 DREKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT-SDRLY--FEPVTLEDVLEIVRIE 78 (121)
T ss_dssp SSCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS-SSEEE--CCCCSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh-cCceE--EccCCHHHHHHHHHHh
Confidence 3578999996 543 3556667778899999999888765321111 23332 1111233333333334
Q ss_pred CccEEEECCChhhHHHhhhccccCC
Q 024011 208 GVDVILDCMGASYFQRNLGSLNIDG 232 (274)
Q Consensus 208 ~~d~vi~~~g~~~~~~~~~~l~~~g 232 (274)
..|.|+-..|+.....+...|.+.|
T Consensus 79 ~p~~ii~~~GGQtalnla~~L~~~g 103 (121)
T d1a9xa4 79 KPKGVIVQYGGQTPLKLARALEAAG 103 (121)
T ss_dssp CCSEEECSSSTHHHHTTHHHHHHTT
T ss_pred CCCEEEeehhhhhHHHHHHHHHHcC
Confidence 5789998888865333333343333
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.04 E-value=0.73 Score=36.08 Aligned_cols=91 Identities=22% Similarity=0.188 Sum_probs=49.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHH---HHHHcCC-C--EEEeCCCCcHHHHHHHHhCCCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA---VCKDLGA-D--VCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~---~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
.+.+|++||-.|++ .|..... |.+.|+ +|++++.++.... ..+..+. + .++..+..++ ......
T Consensus 30 ~~~~~~~VLDiGcG--~G~ls~~-aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~------~~~~~~ 100 (316)
T d1oria_ 30 HLFKDKVVLDVGSG--TGILCMF-AAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV------ELPVEK 100 (316)
T ss_dssp HHHTTCEEEEETCT--TSHHHHH-HHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC------CCSSSC
T ss_pred ccCCcCEEEEEecC--CcHHHHH-HHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc------ccccce
Confidence 34579999999974 3555554 444676 7999997754322 1222222 1 2233332221 112245
Q ss_pred ccEEEECCChh----------hHHHhhhccccCCEEE
Q 024011 209 VDVILDCMGAS----------YFQRNLGSLNIDGRLF 235 (274)
Q Consensus 209 ~d~vi~~~g~~----------~~~~~~~~l~~~g~~v 235 (274)
+|+|+...-.. .+...-+.|+++|+++
T Consensus 101 ~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii 137 (316)
T d1oria_ 101 VDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 137 (316)
T ss_dssp EEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence 89887532211 1233446889999887
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=87.01 E-value=3.5 Score=29.17 Aligned_cols=103 Identities=23% Similarity=0.268 Sum_probs=64.0
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC--EEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
..+++|.++ |.+. -|-|-....++.. +.+|++++++++.+..+++.-.. ..+.....++.+. ....+...+|.|
T Consensus 14 l~~~~g~~~-vD~T-~G~GGhs~~iL~~-~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~-l~~~~~~~vdgI 89 (182)
T d1wg8a2 14 LAVRPGGVY-VDAT-LGGAGHARGILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRH-LAALGVERVDGI 89 (182)
T ss_dssp HTCCTTCEE-EETT-CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHH-HHHTTCSCEEEE
T ss_pred cCCCCCCEE-EEeC-CCCcHHHHHHhcc-cCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHH-HHHcCCCccCEE
Confidence 357788854 5544 4444445566664 66999999999988887764322 2233344444433 333444568877
Q ss_pred EECCChh----------------hHHHhhhccccCCEEEEEecCC
Q 024011 213 LDCMGAS----------------YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 213 i~~~g~~----------------~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+--.|-. .+....+.++++|+++.+....
T Consensus 90 l~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs 134 (182)
T d1wg8a2 90 LADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHS 134 (182)
T ss_dssp EEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred EEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEeccc
Confidence 6545531 1345667799999999887654
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=86.99 E-value=0.94 Score=30.25 Aligned_cols=77 Identities=22% Similarity=0.249 Sum_probs=47.0
Q ss_pred CCCEEEEecCCchH-----------HHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCC
Q 024011 139 PGESFLVHGGSSGI-----------GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~i-----------G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 206 (274)
.-++|||.|+ |+. +..++..+++.|++++.+..+++....-... +|++ +..-. .+.+.+....
T Consensus 6 ~~kkvlilGs-Gp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~-aD~lYfePlt---~e~v~~Ii~~ 80 (127)
T d1a9xa3 6 DIKSILILGA-GPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM-ADATYIEPIH---WEVVRKIIEK 80 (127)
T ss_dssp SCCEEEEECC-CSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG-SSEEECSCCC---HHHHHHHHHH
T ss_pred CCCEEEEECC-CcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh-cceeeeecCC---HHHHHHHHHH
Confidence 4588999996 543 3455666678899999999888765322222 2333 22222 2333333323
Q ss_pred CCccEEEECCChhh
Q 024011 207 KGVDVILDCMGASY 220 (274)
Q Consensus 207 ~~~d~vi~~~g~~~ 220 (274)
...|.|+-..|+..
T Consensus 81 E~pd~il~~~GGQt 94 (127)
T d1a9xa3 81 ERPDAVLPTMGGQT 94 (127)
T ss_dssp HCCSEEECSSSHHH
T ss_pred hCcCCeEEEeeeeh
Confidence 45899999999854
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=86.98 E-value=0.34 Score=37.81 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=30.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
-.|+|+|| |..|++++..|++.|.++.+.++.++
T Consensus 8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 35899998 99999999999999999999987654
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.91 E-value=0.65 Score=32.22 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=29.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE 174 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~ 174 (274)
.-+++|+|.|+ |.+|.-++..+.+.|+ +|+++.|++
T Consensus 43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 34678999997 9999999999999998 476776653
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.74 E-value=0.37 Score=35.48 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=27.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
|+|+|+ |+.|+.++..+.+.|.+|.++++.+
T Consensus 8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 688897 9999999999999999999998654
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.60 E-value=0.35 Score=37.86 Aligned_cols=31 Identities=26% Similarity=0.331 Sum_probs=27.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
|+|+|| |..|+.++..+++.|.+|.++.+++
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 678897 9999999999999999999998654
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.57 E-value=0.3 Score=38.01 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=29.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
.++|.|| |..|+.++..+.+.|.+|.++.+++.
T Consensus 3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4789997 99999999999999999999987644
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=86.33 E-value=3.3 Score=32.23 Aligned_cols=109 Identities=7% Similarity=0.110 Sum_probs=63.2
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe---cChhhHHHHHHcCCCEEEeCCCC----------
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCINYKTE---------- 194 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~---~~~~~~~~~~~~g~~~~~~~~~~---------- 194 (274)
++.+.....-.+.++++. ..+|..|.+++..++..|.+++++. .+.++.+.++.+|++.+......
T Consensus 63 ~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~ 141 (331)
T d1tdja1 63 YAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIEL 141 (331)
T ss_dssp HHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhh
Confidence 334433333333444544 4468899999999999999777765 33456677777787655322110
Q ss_pred ----------------------cHHHHHHHHhCCCCccEEEECCChhh----HHHhhhccccCCEEEEEec
Q 024011 195 ----------------------DFVARVKEETGGKGVDVILDCMGASY----FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 195 ----------------------~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~~l~~~g~~v~~g~ 239 (274)
....++.+.. ..+|.||-++|+.. +...++.+.+..+++.+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~--~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~ 210 (331)
T d1tdja1 142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQQD--AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA 210 (331)
T ss_dssp HHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC--TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred hhcCCCccccccCChHHhhhhhhHHHHHHHhc--CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence 0111222222 23788888887532 3344555667777777754
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=86.29 E-value=1.8 Score=30.40 Aligned_cols=96 Identities=18% Similarity=0.228 Sum_probs=56.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecC--hhhHHHHHHc----C---CCE------E-Ee------CCCCcHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EEKLAVCKDL----G---ADV------C-IN------YKTEDFVAR 199 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~--~~~~~~~~~~----g---~~~------~-~~------~~~~~~~~~ 199 (274)
+|.|.|- |.||+.+.+.+...+.+++++-.. .+.+..+-+. | ... + ++ ....+. +.
T Consensus 2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p-~~ 79 (168)
T d2g82a1 2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP-KE 79 (168)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG-GG
T ss_pred EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh-HH
Confidence 5789996 999999999998889988777533 2233333321 1 111 0 00 111111 11
Q ss_pred HHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ .+...++|+|+||.|... .+.+...+..+.+-|.+..+.
T Consensus 80 i--~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 120 (168)
T d2g82a1 80 I--PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (168)
T ss_dssp C--CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred C--cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence 1 122246999999999743 456666777776666665543
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.23 E-value=0.4 Score=37.80 Aligned_cols=34 Identities=9% Similarity=0.037 Sum_probs=28.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~ 175 (274)
++|+|+|| |..|++++..|++.| .+|++..++++
T Consensus 5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 68999997 999999987776655 58999988753
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=86.22 E-value=2 Score=29.78 Aligned_cols=80 Identities=11% Similarity=0.085 Sum_probs=47.1
Q ss_pred EEEEecCCchHHHH-HHHHHHHc-CCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTF-AIQMGKCQ-GVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~-~~~~~~~~-g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++.|.|+ |.+|.. ....++.. +.+++++++++++.+.+. +++.....+ ++.+ +.+ ..+|+|+.++..
T Consensus 3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~~~-ll~----~~iD~V~I~tp~ 72 (167)
T d1xeaa1 3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT----DYRD-VLQ----YGVDAVMIHAAT 72 (167)
T ss_dssp EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS----STTG-GGG----GCCSEEEECSCG
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc----cHHH-hcc----cccceecccccc
Confidence 5789997 888854 55666555 558888888888776664 455443221 1111 111 137888877765
Q ss_pred hh-HHHhhhccccC
Q 024011 219 SY-FQRNLGSLNID 231 (274)
Q Consensus 219 ~~-~~~~~~~l~~~ 231 (274)
.. .+.+..+++.+
T Consensus 73 ~~H~~~~~~al~~g 86 (167)
T d1xeaa1 73 DVHSTLAAFFLHLG 86 (167)
T ss_dssp GGHHHHHHHHHHTT
T ss_pred cccccccccccccc
Confidence 43 44455555543
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=85.89 E-value=0.45 Score=34.73 Aligned_cols=30 Identities=23% Similarity=0.168 Sum_probs=27.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
++|.|+ |+.|+.++..+.+.|.+|.++.+.
T Consensus 6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG 35 (223)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence 678896 999999999999999999999765
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=85.88 E-value=3 Score=28.15 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=28.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL 177 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~ 177 (274)
++|.|.|+ |.+|..++.++...+. ++.+.+.++++.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~ 38 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVP 38 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence 46888897 9999998887777775 888888877653
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=85.79 E-value=0.46 Score=35.12 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=27.9
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
++|+|+ |+.|+.++..+.+.|.+|.++.+.+
T Consensus 9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 678897 9999999999999999999998654
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.74 E-value=3 Score=31.00 Aligned_cols=34 Identities=15% Similarity=0.311 Sum_probs=28.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHH-HcCCeEEEEec
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAG 172 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~ 172 (274)
-.|++++|.|- |.+|..+++++. ..|++|+.+..
T Consensus 30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence 36899999996 999999999875 57999887753
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=85.73 E-value=0.4 Score=36.53 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=27.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
|+|.|+ |-+|..++..|.+.|.+|+++++.
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 789997 999999999999999999999864
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.47 E-value=0.37 Score=34.70 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=28.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+.|+|.|+ |+.|+.++..+.+.|.+++++++.
T Consensus 6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW 37 (192)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence 57899997 999999999999999999988743
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=85.38 E-value=0.36 Score=37.61 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=57.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCC-------CEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGA-------DVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
..++|||.|++ -|..+-.+++..+ .+|.++..+++-.+.+++.-. +.-+.....|..+.+.+ . .+.+|
T Consensus 89 ~pk~VLiiGgG--~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~-~~~yD 164 (295)
T d1inla_ 89 NPKKVLIIGGG--DGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-F-KNEFD 164 (295)
T ss_dssp SCCEEEEEECT--TCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-C-SSCEE
T ss_pred CCceEEEecCC--chHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhc-C-CCCCC
Confidence 35889999963 3555666666655 489999999887777764221 10011112344444433 2 34599
Q ss_pred EEEECC-C----h-------hhHHHhhhccccCCEEEEEec
Q 024011 211 VILDCM-G----A-------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 211 ~vi~~~-g----~-------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+||.-. . . +.+..+.+.|+++|.++.-..
T Consensus 165 vIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~ 205 (295)
T d1inla_ 165 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 205 (295)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence 886422 1 1 124567788999998886543
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.33 E-value=1.3 Score=34.76 Aligned_cols=90 Identities=20% Similarity=0.155 Sum_probs=49.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHH----HHcCC--C-EEEeCCCCcHHHHHHHHhCCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC----KDLGA--D-VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~----~~~g~--~-~~~~~~~~~~~~~~~~~~~~~ 207 (274)
...+|++||-.|++ .|..+. .|.+.|+ +|++++.++. .+.+ ++.+. . .++..+..+. .....
T Consensus 35 ~~~~~~~VLDlGcG--tG~ls~-~aa~~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l------~~~~~ 104 (328)
T d1g6q1_ 35 DLFKDKIVLDVGCG--TGILSM-FAAKHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDV------HLPFP 104 (328)
T ss_dssp HHHTTCEEEEETCT--TSHHHH-HHHHTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTS------CCSSS
T ss_pred ccCCcCEEEEeCCC--CCHHHH-HHHHhCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhc------cCccc
Confidence 44578999999974 455554 4455676 8999987753 3222 23332 2 2233332221 11234
Q ss_pred CccEEEECCCh------h----hHHHhhhccccCCEEE
Q 024011 208 GVDVILDCMGA------S----YFQRNLGSLNIDGRLF 235 (274)
Q Consensus 208 ~~d~vi~~~g~------~----~~~~~~~~l~~~g~~v 235 (274)
.+|+|+...-. . .+...-+.|+++|+++
T Consensus 105 ~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 58988763221 1 1233346789999886
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=85.14 E-value=0.44 Score=36.91 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=27.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
|+|+|+ |..|+.++..|.+.|++|+++.+.
T Consensus 19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~ 48 (308)
T d1y0pa2 19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE 48 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 789997 999999999999999999999864
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=85.07 E-value=2.3 Score=29.00 Aligned_cols=70 Identities=19% Similarity=0.127 Sum_probs=40.4
Q ss_pred EEEEecCCchHHHHHHHHHH-HcC--CeEEEEecChhhHHHHHH---cCC-CEE-EeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGK-CQG--VRVFVTAGSEEKLAVCKD---LGA-DVC-INYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~-~~g--~~v~~~~~~~~~~~~~~~---~g~-~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
+|.|+|++|.+|..++.++. +.+ .++.+.+..+.....+.+ ... ... ......++ +.+ .+.|+|+
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~------~~aDvvv 74 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PAL------EGADVVL 74 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHH------TTCSEEE
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc-ccc------CCCCEEE
Confidence 57899988999998887654 434 488888865433222222 111 111 11122232 222 2479999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
-++|.
T Consensus 75 itaG~ 79 (145)
T d2cmda1 75 ISAGV 79 (145)
T ss_dssp ECCSC
T ss_pred ECCCc
Confidence 99985
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=84.95 E-value=5.2 Score=28.79 Aligned_cols=93 Identities=13% Similarity=0.162 Sum_probs=60.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHH----HHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVC----KDLGADVC--INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~----~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+..+|=+|+ |.|..++.+|+.. ..+++.++.+...+..+ ++.+.+.+ +..+... +.+......+|.|
T Consensus 30 ~PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~----l~~~~~~~~~d~v 103 (204)
T d2fcaa1 30 NPIHIEVGT--GKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT----LTDVFEPGEVKRV 103 (204)
T ss_dssp CCEEEEECC--TTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG----HHHHCCTTSCCEE
T ss_pred CceEEEEEe--cCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhh----hhcccCchhhhcc
Confidence 345677775 6789999999886 56999999888876554 34555432 2222222 2344455568877
Q ss_pred EECCCh---------------hhHHHhhhccccCCEEEEEe
Q 024011 213 LDCMGA---------------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 213 i~~~g~---------------~~~~~~~~~l~~~g~~v~~g 238 (274)
+-.... ..+....+.|+++|.+.+..
T Consensus 104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T 144 (204)
T d2fcaa1 104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 144 (204)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence 654332 23566778899999998764
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.88 E-value=0.14 Score=38.78 Aligned_cols=45 Identities=4% Similarity=-0.004 Sum_probs=31.0
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (274)
...+|+++|=.|++ .|.....++...+.+|+.++-++..++.+++
T Consensus 48 ~~~~g~~vLDlGcG--~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~ 92 (257)
T d2a14a1 48 GGLQGDTLIDIGSG--PTIYQVLAACDSFQDITLSDFTDRNREELEK 92 (257)
T ss_dssp TSCCEEEEEESSCT--TCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred cCCCCCEEEEECCC--CCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence 34678889888873 3544444444444489999999988877753
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=84.87 E-value=0.38 Score=37.82 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=26.8
Q ss_pred EEEecCCchHHHHHHHHHH-----HcCCeEEEEecChh
Q 024011 143 FLVHGGSSGIGTFAIQMGK-----CQGVRVFVTAGSEE 175 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~-----~~g~~v~~~~~~~~ 175 (274)
|+|.|| |..|++++..+. +.|.+|.++++++.
T Consensus 10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~ 46 (360)
T d1pn0a1 10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST 46 (360)
T ss_dssp EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence 789997 999999998884 57999999987643
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=84.81 E-value=0.46 Score=34.86 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=27.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
.++|+|+ |+.|+.++..+++.|.+|.++.+.
T Consensus 7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 3788897 999999999999999999999864
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=84.63 E-value=1.3 Score=33.16 Aligned_cols=96 Identities=23% Similarity=0.275 Sum_probs=58.5
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHH----HcCC-C-E-EEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGA-D-V-CINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~----~~g~-~-~-~~~~~~~~~~~~~~~~~ 204 (274)
....+...++||=.|+ |.|..+..++++. +.++++.+. ++.++.++ +.+. + . ....+ +. +.
T Consensus 74 ~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D---~~----~~- 142 (253)
T d1tw3a2 74 AAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD---FF----EP- 142 (253)
T ss_dssp HHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC---TT----SC-
T ss_pred hhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhcccc---ch----hh-
Confidence 3445677789998885 5688888999887 568888886 34343332 3332 1 1 12111 11 11
Q ss_pred CCCCccEEEECCChh---------hHHHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGAS---------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~---------~~~~~~~~l~~~g~~v~~g~ 239 (274)
...++|+|+-..--. .+..+.+.|+++|++++.-.
T Consensus 143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence 123589887543321 24667788999999998754
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=84.58 E-value=0.33 Score=33.61 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=48.8
Q ss_pred EEEEecCCchHHHHHHHHHHHc----CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ----GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~----g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+|.|.||+|-+|+-+++++..+ ..++.....+...-+.. .+..+........+. + .. ..+|++|-|.+
T Consensus 2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~~~~~~~~~~~~~~~-~----~~--~~~DvvF~alp 73 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-NFGKDAGMLHDAFDI-E----SL--KQLDAVITCQG 73 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-CSSSCCCBCEETTCH-H----HH--TTCSEEEECSC
T ss_pred EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-ccCCcceeeecccch-h----hh--ccccEEEEecC
Confidence 5889999999999999866532 24666554332211100 111111110001111 1 11 24899999999
Q ss_pred hhhHHHhhhccccCC---EEEEEecCC
Q 024011 218 ASYFQRNLGSLNIDG---RLFIIGTQG 241 (274)
Q Consensus 218 ~~~~~~~~~~l~~~g---~~v~~g~~~ 241 (274)
..........+...| .+++.+...
T Consensus 74 ~~~s~~~~~~l~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 74 GSYTEKVYPALRQAGWKGYWIDAASTL 100 (147)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred chHHHHHhHHHHHcCCceEEEeCCccc
Confidence 876555555544433 366665543
|
| >d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Sporulation response regulator Spo0F species: Bacillus subtilis [TaxId: 1423]
Probab=84.50 E-value=3.6 Score=26.67 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=40.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~ 189 (274)
+++|||....-.+-..+.+.+...|++|......++.++.+++..++.++
T Consensus 1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~~~~dlil 50 (119)
T d1peya_ 1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVL 50 (119)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhCCCCEEE
Confidence 47899998888888899999999999998877666667777776666654
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=84.29 E-value=0.51 Score=34.45 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=26.9
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
++|+|+ |+.|+.++..+.+.|.+|.++++.
T Consensus 6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~ 35 (229)
T d3lada1 6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY 35 (229)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence 678897 999999999999999999999853
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=84.19 E-value=1.4 Score=30.00 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=26.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEK 176 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~ 176 (274)
+|.|.|+ |.+|..++..+...+. ++.++++++++
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~ 38 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEK 38 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence 4778897 9999999988888776 79999988765
|
| >d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein TM0922, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=84.07 E-value=2.2 Score=31.16 Aligned_cols=107 Identities=19% Similarity=0.221 Sum_probs=55.6
Q ss_pred HHHHHHHhhcCCCCCCEEEEe-cC--CchHHHHHHHHHHHcCCeEEEEecChhh-------HHHHHHcCCCEEEeCCCCc
Q 024011 126 TVWSTVFMTSHLSPGESFLVH-GG--SSGIGTFAIQMGKCQGVRVFVTAGSEEK-------LAVCKDLGADVCINYKTED 195 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~-Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~ 195 (274)
.++..+.+...-...++++|. |. .|+=|.++++.++..|++|.++-..+.. .+...+++...+.... ..
T Consensus 26 ~~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 104 (211)
T d2ax3a2 26 SVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVVEQFE-PS 104 (211)
T ss_dssp HHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEESCCC-GG
T ss_pred HHHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCccccccc-cc
Confidence 333344343322234556555 33 4466799999999999988776543221 1223355554432111 11
Q ss_pred HHHHHHHHhCCCCccEEEECC-Ch-------hhHHHhhhccccC-CEEEEEecCCC
Q 024011 196 FVARVKEETGGKGVDVILDCM-GA-------SYFQRNLGSLNID-GRLFIIGTQGG 242 (274)
Q Consensus 196 ~~~~~~~~~~~~~~d~vi~~~-g~-------~~~~~~~~~l~~~-g~~v~~g~~~~ 242 (274)
.. ..+|++||+. |. ......++.+... ..++.+-.+.+
T Consensus 105 -------~~--~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG 151 (211)
T d2ax3a2 105 -------IL--NEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG 151 (211)
T ss_dssp -------GG--GGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred -------cc--cCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence 11 2379999986 32 1244555555443 34666655543
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=83.67 E-value=5.3 Score=27.78 Aligned_cols=96 Identities=15% Similarity=0.196 Sum_probs=54.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcC-CeEEEEecC--hhhHHHHHHc-------CCCEE-------Ee------CCCCcHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGS--EEKLAVCKDL-------GADVC-------IN------YKTEDFVA 198 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~--~~~~~~~~~~-------g~~~~-------~~------~~~~~~~~ 198 (274)
++.|.|- |.+|+++.+.+.... .+++++-.. .+.+..+-++ ..... ++ ....+. +
T Consensus 3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p-~ 80 (166)
T d1gado1 3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP-A 80 (166)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-G
T ss_pred EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh-H
Confidence 5789995 999999999888764 577666533 2233333221 11111 11 111111 1
Q ss_pred HHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+. ++..++|+|+||+|... .+.+...+..+.+-+++..+.
T Consensus 81 ~i~--W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~ 122 (166)
T d1gado1 81 NLK--WDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (166)
T ss_dssp GGC--HHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred HCC--ccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence 111 11235999999999743 455667777777777776554
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.61 E-value=0.69 Score=33.69 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=26.9
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
++|.|+ |+.|+.++..+.+.|.+|.++.+.
T Consensus 6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGG-GSGGLASARRAAELGARAAVVESH 35 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 678897 999999999999999999999754
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.35 E-value=3.7 Score=32.39 Aligned_cols=56 Identities=25% Similarity=0.386 Sum_probs=42.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe---cChhhHHHHHHcCCCEEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~---~~~~~~~~~~~~g~~~~~ 189 (274)
+...+++++.+ |...+|..|.+++..++..|.+.+++. .++++.+.++.+|++.+.
T Consensus 90 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~ 148 (355)
T d1jbqa_ 90 RDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 148 (355)
T ss_dssp HHTCSCTTCEE-EEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEE
T ss_pred HcCCcccCceE-EEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEE
Confidence 44556666655 555579999999999999999877765 345677888888887654
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.22 E-value=0.57 Score=34.61 Aligned_cols=29 Identities=21% Similarity=0.194 Sum_probs=26.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
++|+|+ |+.|+.++..+.+.|.+|.++..
T Consensus 6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~ 34 (235)
T d1h6va1 6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDF 34 (235)
T ss_dssp EEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence 688897 99999999999999999999984
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=83.00 E-value=5.5 Score=27.77 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=53.9
Q ss_pred EEEEecCCchHHHHHHHHHHHc---CCeEEEEecC--hhhHHHHHHc----C---CC------EE-Ee------CCCCcH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGS--EEKLAVCKDL----G---AD------VC-IN------YKTEDF 196 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~---g~~v~~~~~~--~~~~~~~~~~----g---~~------~~-~~------~~~~~~ 196 (274)
+|.|.|- |.+|+.+.+.+... ..+++.+-.. .+.+..+-+. | .+ .+ ++ ....+.
T Consensus 2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 5889995 99999999987653 3577665422 3333444321 1 11 11 11 111111
Q ss_pred HHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCC
Q 024011 197 VARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+. +...++|+|+||+|.. ..+.+...+..+-+-+++..+.
T Consensus 81 -~~i~--W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~ 123 (169)
T d1hdgo1 81 -SKLP--WKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA 123 (169)
T ss_dssp -GGSC--HHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred -hhCC--ccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence 1111 1112589999999974 3566666777777666666554
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=82.79 E-value=5.8 Score=27.63 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=56.5
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCeEEEEec---ChhhHHHHHHc-------CCCEE-------Ee------CCCCcHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAG---SEEKLAVCKDL-------GADVC-------IN------YKTEDFV 197 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~---~~~~~~~~~~~-------g~~~~-------~~------~~~~~~~ 197 (274)
+|.|.|- |.+|+++.+.+... ..+++++-. +.+.+..+-++ ..+.. ++ ....+.
T Consensus 3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p- 80 (169)
T d1u8fo1 3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP- 80 (169)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCCh-
Confidence 5889995 99999999877755 467776643 23344444331 11111 11 111111
Q ss_pred HHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+++ -+...++|+|+||+|... .+.+...+..+.+-+++..+.
T Consensus 81 ~~i--~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~ 123 (169)
T d1u8fo1 81 SKI--KWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS 123 (169)
T ss_dssp GGC--CTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred hhC--CccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence 111 133457999999999743 555566777787777776654
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.70 E-value=8.2 Score=29.76 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=56.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH------cCCCEEEeCCCCcHHHHHHHH-hCCCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD------LGADVCINYKTEDFVARVKEE-TGGKG 208 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~-~~~~~ 208 (274)
...++++||=..+. .|...+.++ ..|++|+.++.++..++.+++ +....+ .....|..+.+.+. ..+..
T Consensus 129 ~~~~~~rVLdlf~~--tG~~sl~aa-~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~-~~i~~D~~~~l~~~~~~~~~ 204 (309)
T d2igta1 129 TADRPLKVLNLFGY--TGVASLVAA-AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPI-RWICEDAMKFIQREERRGST 204 (309)
T ss_dssp HSSSCCEEEEETCT--TCHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCE-EEECSCHHHHHHHHHHHTCC
T ss_pred hccCCCeEEEecCC--CcHHHHHHH-hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcE-EEEeCCHHHhHHHHhhcCCC
Confidence 45668888766542 244444433 468999999999998877763 222111 11123444444332 22346
Q ss_pred ccEEEECCC--------h-----hh----HHHhhhccccCCEEEEEecCC
Q 024011 209 VDVILDCMG--------A-----SY----FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 209 ~d~vi~~~g--------~-----~~----~~~~~~~l~~~g~~v~~g~~~ 241 (274)
||+||-.-- . .. ...+.+.+.++|.++++....
T Consensus 205 fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~~s 254 (309)
T d2igta1 205 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 254 (309)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred CCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEecCC
Confidence 998875211 0 11 234556788888766555443
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=82.67 E-value=1.9 Score=31.68 Aligned_cols=82 Identities=13% Similarity=0.196 Sum_probs=44.4
Q ss_pred EEEEecCCchHHH-HHHHHHHHc-CCeEE-EEecChhhHHHH-HHcCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 142 SFLVHGGSSGIGT-FAIQMGKCQ-GVRVF-VTAGSEEKLAVC-KDLGAD--VCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~-~~~~~~~~~-g~~v~-~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++.|.|+ |.+|. ..+..++.. +++++ ++++++++.+.+ ++++.. .+..++ ++ .+......+|+|+-+
T Consensus 35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~--d~----~ell~~~~iD~V~I~ 107 (221)
T d1h6da1 35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS--NF----DKIAKDPKIDAVYII 107 (221)
T ss_dssp EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS--SG----GGGGGCTTCCEEEEC
T ss_pred EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC--ch----hhhcccccceeeeec
Confidence 6889997 88885 344444444 67777 456777776554 455542 111111 11 122223457888877
Q ss_pred CChhh-HHHhhhcccc
Q 024011 216 MGASY-FQRNLGSLNI 230 (274)
Q Consensus 216 ~g~~~-~~~~~~~l~~ 230 (274)
+.... .+.+.++++.
T Consensus 108 tp~~~H~~~~~~al~~ 123 (221)
T d1h6da1 108 LPNSLHAEFAIRAFKA 123 (221)
T ss_dssp SCGGGHHHHHHHHHHT
T ss_pred cchhhhhhHHHHhhhc
Confidence 76532 4444444443
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=82.60 E-value=2.5 Score=29.58 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=53.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-CEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.+..|+++|=.++ |.|...+. +...|++++.++.+++.++.++ ..+. +.+...+.+.+..... .....||
T Consensus 38 ~~~~g~~vLDl~~--G~G~~~i~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~--~~~~~fD 112 (171)
T d1ws6a1 38 RYPRRGRFLDPFA--GSGAVGLE-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAK--AQGERFT 112 (171)
T ss_dssp HCTTCCEEEEETC--SSCHHHHH-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHH--HTTCCEE
T ss_pred cccCCCeEEEecc--ccchhhhh-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhccccccc--ccCCccc
Confidence 4567788876654 23334444 3446899999999998877665 3443 3333333332222222 2334599
Q ss_pred EEEECC----Ch-hhHHHhh--hccccCCEEEEE
Q 024011 211 VILDCM----GA-SYFQRNL--GSLNIDGRLFII 237 (274)
Q Consensus 211 ~vi~~~----g~-~~~~~~~--~~l~~~g~~v~~ 237 (274)
+||-.- +. ..+...+ ..++++|.++.-
T Consensus 113 ~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie 146 (171)
T d1ws6a1 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred eeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence 997532 21 2233332 357888877654
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=82.28 E-value=0.73 Score=33.90 Aligned_cols=33 Identities=15% Similarity=0.032 Sum_probs=27.0
Q ss_pred EEEEecCCchHHHHHHHHHHHc--CCeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~ 175 (274)
+|+|+|+ |..|+.+++.+++. |++|++.++.+.
T Consensus 3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 6889997 99999999877654 779999887653
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=82.15 E-value=4.6 Score=26.02 Aligned_cols=89 Identities=12% Similarity=0.138 Sum_probs=55.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHHHHcCCCEEE-eCCC-----CcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADVCI-NYKT-----EDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~~~~g~~~~~-~~~~-----~~~~~~~~~~~~~~~~d~v 212 (274)
|++|||......+-..+..++...|++|+....+ ++.++.+++..++.++ |..- -++..++++... ..-++
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~~G~e~~~~ir~~~~--~~pvi 78 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDP--NAKII 78 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCT--TCCEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCCCHHHHHHHHHHhCC--CCcEE
Confidence 7899999888888999999999999998765544 4556777776777664 4432 234445554432 24445
Q ss_pred EECCChhhHHHhhhccccC
Q 024011 213 LDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 213 i~~~g~~~~~~~~~~l~~~ 231 (274)
+-+. ........++++.|
T Consensus 79 ~ls~-~~~~~~~~~a~~~G 96 (118)
T d1u0sy_ 79 VCSA-MGQQAMVIEAIKAG 96 (118)
T ss_dssp EEEC-TTCHHHHHHHHHTT
T ss_pred EEEc-cCCHHHHHHHHHcC
Confidence 4432 22233334444444
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=82.00 E-value=0.62 Score=36.37 Aligned_cols=31 Identities=26% Similarity=0.281 Sum_probs=27.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
-|+|.|+ |..|+.++..|.+.|++|+++.+.
T Consensus 21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~ 51 (317)
T d1qo8a2 21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKA 51 (317)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4789997 999999999999999999999864
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=81.98 E-value=1.2 Score=32.02 Aligned_cols=89 Identities=18% Similarity=0.150 Sum_probs=57.4
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+.++.+||=.|++ .|..+..+ .+++.++.++..++.+++.+.... ..+..++ ......+|+|+...
T Consensus 34 ~~~~~~vLDiGcG--~G~~~~~~-----~~~~giD~s~~~~~~a~~~~~~~~-~~d~~~l------~~~~~~fD~I~~~~ 99 (208)
T d1vlma_ 34 LLPEGRGVEIGVG--TGRFAVPL-----KIKIGVEPSERMAEIARKRGVFVL-KGTAENL------PLKDESFDFALMVT 99 (208)
T ss_dssp HCCSSCEEEETCT--TSTTHHHH-----TCCEEEESCHHHHHHHHHTTCEEE-ECBTTBC------CSCTTCEEEEEEES
T ss_pred hCCCCeEEEECCC--Cccccccc-----ceEEEEeCChhhcccccccccccc-ccccccc------cccccccccccccc
Confidence 3456679888874 45555444 356789999999988887654333 2222221 11234589998764
Q ss_pred Chh-------hHHHhhhccccCCEEEEEec
Q 024011 217 GAS-------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 217 g~~-------~~~~~~~~l~~~g~~v~~g~ 239 (274)
.-. .+....+.|+++|++++...
T Consensus 100 ~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~ 129 (208)
T d1vlma_ 100 TICFVDDPERALKEAYRILKKGGYLIVGIV 129 (208)
T ss_dssp CGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccccccchhhhhhcCCCCceEEEEec
Confidence 422 25677888999999987754
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=81.86 E-value=5.9 Score=27.63 Aligned_cols=86 Identities=12% Similarity=0.043 Sum_probs=49.0
Q ss_pred EEEEecCCchHHHH-HHHHHHHcC--CeEEE-EecChhhHHHH-HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTF-AIQMGKCQG--VRVFV-TAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~-~~~~~~~~g--~~v~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++.|.|+ |.+|.. ....++..+ ++++. .++++++.+.+ ++++..... .++.+.+. ...+|+|+.++
T Consensus 5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~----~~~~ell~----~~~id~v~I~t 75 (181)
T d1zh8a1 5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF----DSYEELLE----SGLVDAVDLTL 75 (181)
T ss_dssp EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE----SCHHHHHH----SSCCSEEEECC
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee----eeeecccc----ccccceeeccc
Confidence 5789996 888864 456666543 46664 56777776554 456655443 22322222 23489888887
Q ss_pred Chhh-HHHhhhccccCCEEEEE
Q 024011 217 GASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 217 g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
.... .+.+..+++. |+=+++
T Consensus 76 p~~~h~~~~~~al~~-gk~V~~ 96 (181)
T d1zh8a1 76 PVELNLPFIEKALRK-GVHVIC 96 (181)
T ss_dssp CGGGHHHHHHHHHHT-TCEEEE
T ss_pred ccccccccccccccc-chhhhc
Confidence 6543 4444444444 344444
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=81.83 E-value=0.65 Score=36.23 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=27.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
|+|.|+ |..|+.++..|.+.|++|+++.+.
T Consensus 26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~ 55 (322)
T d1d4ca2 26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE 55 (322)
T ss_dssp EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 789997 999999999999999999999864
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=81.70 E-value=1.7 Score=29.91 Aligned_cols=25 Identities=16% Similarity=0.041 Sum_probs=21.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG 164 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g 164 (274)
.-+|.|+||+|.+|+.++..+...+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcc
Confidence 4478999999999999999888654
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=81.58 E-value=5.7 Score=30.49 Aligned_cols=56 Identities=18% Similarity=0.296 Sum_probs=39.5
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---ChhhHHHHHHcCCCEEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCI 189 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~ 189 (274)
+...+.++++|+ ...+|..|.+++..++..|.+.+++.. +..+.+.++.+|+..+.
T Consensus 54 ~~g~~~~~~~vv-~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~ 112 (310)
T d1y7la1 54 KDGTLTKGKEIV-DATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL 112 (310)
T ss_dssp HTTSSCTTCEEE-ESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred HcCCCCCCceee-eecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence 344556777664 455699999999999999997666542 34456677777776653
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=81.46 E-value=0.76 Score=35.35 Aligned_cols=31 Identities=16% Similarity=0.151 Sum_probs=26.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS 173 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~ 173 (274)
.|+|+|+ |.+|.+++..+.+.|. +|.+++++
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 3889997 9999999999988997 69998865
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=81.35 E-value=1.3 Score=30.29 Aligned_cols=33 Identities=9% Similarity=0.143 Sum_probs=28.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--eEEEEecCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSE 174 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~ 174 (274)
+|.|.||+|.+|..++.++...+. ++.++++++
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~ 36 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH 36 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence 588999889999999999998885 888888765
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=81.35 E-value=10 Score=29.56 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=63.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHH-HHcCC-eEEEEecChhhHHHH-HHc----CCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVC-KDL----GADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~-~~~g~-~v~~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+..+++.|+|+ |..+..-++.+ ...+. +|.+.+|+.++.+.+ +++ |..... ..+..+.+ .+.|
T Consensus 126 ~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~---~~s~~eav------~~AD 195 (340)
T d1x7da_ 126 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRR---ASSVAEAV------KGVD 195 (340)
T ss_dssp TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEE---CSSHHHHH------TTCS
T ss_pred cCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCcee---cCCHHHHH------hcCC
Confidence 45689999996 88887666654 45566 899999998876443 333 222221 12232222 2489
Q ss_pred EEEECCChhhHHH--hhhccccCCEEEEEecCCCCccccchh
Q 024011 211 VILDCMGASYFQR--NLGSLNIDGRLFIIGTQGGAKTELNIT 250 (274)
Q Consensus 211 ~vi~~~g~~~~~~--~~~~l~~~g~~v~~g~~~~~~~~~~~~ 250 (274)
+|+-+..+..... -.++++++-.++.+|.....+.+++..
T Consensus 196 Ii~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~~p~~~Eld~~ 237 (340)
T d1x7da_ 196 IITTVTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHAD 237 (340)
T ss_dssp EEEECCCCSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHH
T ss_pred ceeeccccCCCCcccchhhcCCCCEEeecccchhhhhccCHH
Confidence 9988775432111 135789988999998876555555554
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=81.25 E-value=3 Score=30.61 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=36.3
Q ss_pred HHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q 024011 125 CTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS 173 (274)
Q Consensus 125 ~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~ 173 (274)
...+.+++....--...++++.|+ |..|..+++++...+. +++.+++.
T Consensus 11 Agll~a~~~~g~~l~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~ 59 (222)
T d1vl6a1 11 AAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK 59 (222)
T ss_dssp HHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHhCCChhhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence 334445655555556789999998 8999999999988887 78888764
|
| >d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: DNA-binding response regulator MicA, N-terminal domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=81.15 E-value=2.6 Score=27.25 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=40.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~ 189 (274)
|+|||......+...+...+...|++|..+...++.++.+++..++.++
T Consensus 1 KrILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlil 49 (117)
T d2a9pa1 1 KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIII 49 (117)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEE
Confidence 5788888888888999999999999998877667777888877777664
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=81.11 E-value=0.58 Score=34.48 Aligned_cols=33 Identities=12% Similarity=-0.091 Sum_probs=27.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC-------CeEEEEecCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG-------VRVFVTAGSE 174 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g-------~~v~~~~~~~ 174 (274)
.+|+|.|+ |+.|++++..+.+.| ++|.+.++.+
T Consensus 3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~ 42 (239)
T d1lqta2 3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 42 (239)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence 47999997 999999999998877 5788888754
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=81.07 E-value=0.68 Score=29.83 Aligned_cols=36 Identities=19% Similarity=0.069 Sum_probs=26.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
-.|++|+|.|+ |..|.-++..+.....+++...++.
T Consensus 30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence 35899999997 7778777777766777766666544
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=80.80 E-value=0.82 Score=34.84 Aligned_cols=33 Identities=21% Similarity=0.133 Sum_probs=27.0
Q ss_pred CEEEEecCCchHHHHHHHHHH-HcCCeEEEEecCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSE 174 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~ 174 (274)
.-|+|.|+ |..|+.++..+. +.|.+|.++++.+
T Consensus 34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence 44889997 999998887654 4699999999765
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.71 E-value=0.71 Score=35.07 Aligned_cols=45 Identities=9% Similarity=-0.004 Sum_probs=32.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (274)
+...|+++|=.|++. |......+.....+|++++-++..++.+++
T Consensus 51 g~~~g~~vLDiGcG~--g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~ 95 (263)
T d2g72a1 51 GEVSGRTLIDIGSGP--TVYQLLSACSHFEDITMTDFLEVNRQELGR 95 (263)
T ss_dssp SCSCCSEEEEETCTT--CCGGGTTGGGGCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCcEEEEeccCC--CHHHHHHhcccCCeEEEEeCCHHHHHHHHH
Confidence 455689999999844 444444445556699999999998887763
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=80.71 E-value=0.95 Score=34.07 Aligned_cols=30 Identities=23% Similarity=0.300 Sum_probs=27.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
++|+|+ |+.|+.++..+.+.|.+|.++++.
T Consensus 4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~ 33 (259)
T d1onfa1 4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS 33 (259)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence 678897 999999999999999999999864
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=80.66 E-value=1.4 Score=31.64 Aligned_cols=39 Identities=13% Similarity=0.006 Sum_probs=32.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (274)
+|.|.|. |-+|+.++..+ +.|++|+.++.++++.+.+++
T Consensus 2 kI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred EEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence 5778885 99999887666 469999999999998887764
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=80.29 E-value=1.5 Score=33.11 Aligned_cols=96 Identities=18% Similarity=0.150 Sum_probs=58.4
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHH----HcCC-CEE--EeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGA-DVC--INYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~----~~g~-~~~--~~~~~~~~~~~~~~~~ 204 (274)
+...+...++||=.|+ |.|..+..++++. +.++++.+. ++.++.++ +.+. +.+ ...+..+ ..
T Consensus 75 ~~~d~~~~~~vlDvG~--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~-------~~ 144 (256)
T d1qzza2 75 DAYDWSAVRHVLDVGG--GNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-------PL 144 (256)
T ss_dssp HTSCCTTCCEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-------CC
T ss_pred hcCCCccCCEEEEECC--CCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccc-------cc
Confidence 3345677788988885 6688999999987 569999886 44443332 3332 211 1211111 11
Q ss_pred CCCCccEEEECCCh-----h----hHHHhhhccccCCEEEEEec
Q 024011 205 GGKGVDVILDCMGA-----S----YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 205 ~~~~~d~vi~~~g~-----~----~~~~~~~~l~~~g~~v~~g~ 239 (274)
..++|+++-..-- . .+..+.+.|+++|+++++..
T Consensus 145 -p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 145 -PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp -SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 2358887643221 1 24567788999999998864
|