Citrus Sinensis ID: 024044

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270---
MNRTKKLWKPFCQVAHRALPSTSRFKLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
cccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHc
cccHccccccccHHHHHcccccccEEEccccccccccEEEEcccccccccccccccccEEEccEEEEcccHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHHHHHHHccHHHHccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcc
mnrtkklwkPFCQVahralpstsrfklsnynynfstQIYFldctsssriqnpslycglCYYFEILkfsgrsfcsesaekasnatcwncneapkaapflfcescrsvqpvdhsvdyFQIFGlgkkyeignekleGKYKDwqkrihpdlvhskseKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLegvevnedetvsePELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
mnrtkklwkpfcqvahralpstsrfkLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEgkykdwqkrihpdlvhsksekerEYAAEQSGRVIEAYRTLTNPLARAIYILRlegvevnedetvSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
MNRTKKLWKPFCQVAHRALPSTSRFKLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
******LWKPFCQVAHRALPSTSRFKLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIH********************RVIEAYRTLTNPLARAIYILRLEGVEVNE********LLMEIMEI*********************EKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVN*******
*********PFCQVAHR************************************LYCGLCYYFEI*********************************LFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHP*****************SGRVIEAYRTLTNPLARAIYILRLEGVE*****TVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
MNRTKKLWKPFCQVAHRALPSTSRFKLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFC*********ATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVH*************SGRVIEAYRTLTNPLARAIYILRLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
****KKLWKPFCQVAHRALPSTSRFKLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIA*K*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNRTKKLWKPFCQVAHRALPSTSRFKLSNYNYNFSTQIYFLDCTSSSRIQNPSLYCGLCYYFEILKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query273 2.2.26 [Sep-21-2011]
Q8K3A0234 Iron-sulfur cluster co-ch yes no 0.754 0.880 0.308 7e-30
Q8IWL3235 Iron-sulfur cluster co-ch yes no 0.732 0.851 0.308 6e-29
Q9KTX9171 Co-chaperone protein HscB yes no 0.373 0.596 0.417 8e-19
A5F3G7171 Co-chaperone protein HscB yes no 0.373 0.596 0.417 8e-19
A8GHY0173 Co-chaperone protein HscB yes no 0.575 0.907 0.320 2e-18
O69220171 Co-chaperone protein HscB yes no 0.564 0.900 0.312 1e-17
C1DE65173 Co-chaperone protein HscB yes no 0.564 0.890 0.312 1e-17
Q2SXE1175 Co-chaperone protein HscB yes no 0.567 0.885 0.317 2e-17
A7MU46171 Co-chaperone protein HscB yes no 0.391 0.625 0.379 2e-17
Q87S25171 Co-chaperone protein HscB yes no 0.388 0.619 0.373 2e-17
>sp|Q8K3A0|HSC20_MOUSE Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Mus musculus GN=Hscb PE=2 SV=2 Back     alignment and function desciption
 Score =  130 bits (328), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 120/211 (56%), Gaps = 5/211 (2%)

Query: 64  ILKFSGRSFCSE--SAEKASNATCWNCNEAPKAA--PFLFCESCRSVQPVDHSVDYFQIF 119
           +  F GR       +A K+    CWNC  A +A      FC  CR++QP D + DYF + 
Sbjct: 17  LAGFLGRRLLGSNAAAGKSIAPQCWNCGHAREAGCGDEFFCSHCRALQPPDPTRDYFSLM 76

Query: 120 GLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLAR 179
              + + +   KL+ +Y+  Q+ +HPD    KS+ E+ ++ + S  V +AY+TL  PL R
Sbjct: 77  NCNRSFRVDVTKLQHRYQQLQRLVHPDFFSQKSQTEKHFSDKHSTLVNDAYKTLQAPLTR 136

Query: 180 AIYILRLEGVEVNED-ETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGN 238
            +Y+L+L+G+E+ E  +  ++ + L+EIMEI E + DA     ++EI++ ++ K   + +
Sbjct: 137 GLYLLKLQGIEIPEGTDYKADSQFLVEIMEINERLADAQSEAAMEEIEATVRAKQKEFTD 196

Query: 239 SFADAYQNRNFDEARVCIRRMTYYHRVNEEI 269
           +   A++  +F++A+  + +M Y+  + E+I
Sbjct: 197 NINSAFEQGDFEKAKELLTKMRYFSNIEEKI 227
Acts as a co-chaperone in iron-sulfur cluster assembly in mitochondria.
Mus musculus (taxid: 10090)
>sp|Q8IWL3|HSC20_HUMAN Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Homo sapiens GN=HSCB PE=1 SV=3 Back     alignment and function description
>sp|Q9KTX9|HSCB_VIBCH Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=hscB PE=1 SV=1 Back     alignment and function description
>sp|A5F3G7|HSCB_VIBC3 Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=hscB PE=3 SV=1 Back     alignment and function description
>sp|A8GHY0|HSCB_SERP5 Co-chaperone protein HscB OS=Serratia proteamaculans (strain 568) GN=hscB PE=3 SV=1 Back     alignment and function description
>sp|O69220|HSCB_AZOVI Co-chaperone protein HscB homolog OS=Azotobacter vinelandii GN=hscB PE=3 SV=1 Back     alignment and function description
>sp|C1DE65|HSCB_AZOVD Co-chaperone protein HscB homolog OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=hscB PE=3 SV=1 Back     alignment and function description
>sp|Q2SXE1|HSCB_BURTA Co-chaperone protein HscB homolog OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hscB PE=3 SV=1 Back     alignment and function description
>sp|A7MU46|HSCB_VIBHB Co-chaperone protein HscB homolog OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hscB PE=3 SV=1 Back     alignment and function description
>sp|Q87S25|HSCB_VIBPA Co-chaperone protein HscB homolog OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=hscB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query273
224107767210 predicted protein [Populus trichocarpa] 0.765 0.995 0.714 6e-83
449437496275 PREDICTED: iron-sulfur cluster co-chaper 0.787 0.781 0.677 6e-81
225439356267 PREDICTED: iron-sulfur cluster co-chaper 0.963 0.985 0.555 2e-78
356500569266 PREDICTED: iron-sulfur cluster co-chaper 0.963 0.988 0.542 2e-77
255566201272 Co-chaperone protein HscB, mitochondrial 0.978 0.981 0.546 2e-76
356537218265 PREDICTED: iron-sulfur cluster co-chaper 0.956 0.984 0.544 1e-75
297810741255 hypothetical protein ARALYDRAFT_487450 [ 0.754 0.807 0.638 1e-73
30681429252 molecular chaperone HscB [Arabidopsis th 0.736 0.797 0.641 3e-73
9758421246 unnamed protein product [Arabidopsis tha 0.736 0.817 0.641 5e-73
326497239259 predicted protein [Hordeum vulgare subsp 0.736 0.776 0.578 4e-65
>gi|224107767|ref|XP_002333468.1| predicted protein [Populus trichocarpa] gi|222836988|gb|EEE75381.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 150/210 (71%), Positives = 172/210 (81%), Gaps = 1/210 (0%)

Query: 65  LKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKK 124
           L FSG+SFCS  + + +N  CWNCN  P+ APFL CESC ++QPVDHSVDYFQIFGL  K
Sbjct: 1   LSFSGKSFCSAQSSEKTNLRCWNCNAEPQNAPFLVCESCTTIQPVDHSVDYFQIFGLENK 60

Query: 125 YEIG-NEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYI 183
           YEI  +  LE KYK+WQK++HPDLVHSK EKERE+AAEQS RVI+AYRTL N L+RAIYI
Sbjct: 61  YEIEEDHNLEVKYKNWQKKLHPDLVHSKPEKEREFAAEQSARVIDAYRTLNNALSRAIYI 120

Query: 184 LRLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADA 243
           L+LEGV VNE+ETVSEPELL EIMEIREAVE+A D Q LKEIQS MQEKL +W NSFA A
Sbjct: 121 LKLEGVNVNEEETVSEPELLAEIMEIREAVEEAPDYQALKEIQSSMQEKLQNWSNSFASA 180

Query: 244 YQNRNFDEARVCIRRMTYYHRVNEEIAKKL 273
           +Q   F+EA+ CIRRMTYY RVNEEI K+L
Sbjct: 181 FQGHKFEEAKNCIRRMTYYDRVNEEIVKRL 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449437496|ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial-like [Cucumis sativus] gi|449501132|ref|XP_004161286.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225439356|ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial isoform 1 [Vitis vinifera] gi|359481056|ref|XP_003632561.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial isoform 2 [Vitis vinifera] gi|296089348|emb|CBI39120.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356500569|ref|XP_003519104.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|255566201|ref|XP_002524088.1| Co-chaperone protein HscB, mitochondrial precursor, putative [Ricinus communis] gi|223536656|gb|EEF38298.1| Co-chaperone protein HscB, mitochondrial precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356537218|ref|XP_003537126.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|297810741|ref|XP_002873254.1| hypothetical protein ARALYDRAFT_487450 [Arabidopsis lyrata subsp. lyrata] gi|297319091|gb|EFH49513.1| hypothetical protein ARALYDRAFT_487450 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30681429|ref|NP_196259.2| molecular chaperone HscB [Arabidopsis thaliana] gi|22136056|gb|AAM91610.1| putative protein [Arabidopsis thaliana] gi|23197714|gb|AAN15384.1| putative protein [Arabidopsis thaliana] gi|332003628|gb|AED91011.1| molecular chaperone HscB [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9758421|dbj|BAB08963.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|326497239|dbj|BAK02204.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query273
TAIR|locus:2164310252 AT5G06410 [Arabidopsis thalian 0.736 0.797 0.650 1.8e-69
RGD|1311005234 Hscb "HscB iron-sulfur cluster 0.776 0.905 0.307 1.3e-31
MGI|MGI:2141135234 Hscb "HscB iron-sulfur cluster 0.743 0.867 0.312 1.1e-30
UNIPROTKB|Q8IWL3235 HSCB "Iron-sulfur cluster co-c 0.732 0.851 0.308 2.3e-30
UNIPROTKB|F1MLK9235 HSCB "Uncharacterized protein" 0.706 0.821 0.321 3.8e-30
ZFIN|ZDB-GENE-070705-97267 si:ch211-207k7.4 "si:ch211-207 0.739 0.756 0.325 4.9e-30
UNIPROTKB|F6UZ83235 HSCB "Uncharacterized protein" 0.732 0.851 0.313 2.1e-29
UNIPROTKB|E2QU61225 HSCB "Uncharacterized protein" 0.703 0.853 0.306 5.7e-27
FB|FBgn0263606240 l(3)72Do "lethal (3) 72Do" [Dr 0.703 0.8 0.270 1.2e-24
WB|WBGene00001033211 dnj-15 [Caenorhabditis elegans 0.681 0.881 0.278 7.8e-23
TAIR|locus:2164310 AT5G06410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 136/209 (65%), Positives = 167/209 (79%)

Query:    65 LKFSGRSFCSESAEKASNATCWNCNEAPKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKK 124
             L+FSGR FCSES      A CWNC E  KAA FLFC SCRS+QPVD SVDYFQIFGL KK
Sbjct:    52 LRFSGRVFCSESG-----AGCWNCGE--KAA-FLFCNSCRSIQPVDDSVDYFQIFGLEKK 103

Query:   125 YEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYIL 184
             YEI    LEGKYKDWQK++HPDLVH+KS+KER+YAAEQS +V EA RTLT  L+RA+YI+
Sbjct:   104 YEIDPGSLEGKYKDWQKKLHPDLVHNKSKKERDYAAEQSAKVTEACRTLTKRLSRAMYIM 163

Query:   185 RLEGVEVNEDETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAY 244
             +L GV VNE+ET+++P LLMEIME+REA+ +A DS +L +I+SQ+QEKL  W +SF +A+
Sbjct:   164 KLNGVNVNEEETITDPTLLMEIMELREAISEADDSTSLNQIRSQVQEKLKQWSDSFVEAF 223

Query:   245 QNRNFDEARVCIRRMTYYHRVNEEIAKKL 273
             +++ FD+A  CI+RMTYY R  EEI KKL
Sbjct:   224 ESQKFDDAVKCIQRMTYYERACEEILKKL 252
GO:0005739 "mitochondrion" evidence=ISM
GO:0006457 "protein folding" evidence=IEA;ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051087 "chaperone binding" evidence=IEA
RGD|1311005 Hscb "HscB iron-sulfur cluster co-chaperone homolog (E. coli)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2141135 Hscb "HscB iron-sulfur cluster co-chaperone homolog (E. coli)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IWL3 HSCB "Iron-sulfur cluster co-chaperone protein HscB, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MLK9 HSCB "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070705-97 si:ch211-207k7.4 "si:ch211-207k7.4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F6UZ83 HSCB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2QU61 HSCB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0263606 l(3)72Do "lethal (3) 72Do" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00001033 dnj-15 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query273
PRK03578176 PRK03578, hscB, co-chaperone HscB; Provisional 1e-27
PRK05014171 PRK05014, hscB, co-chaperone HscB; Provisional 5e-26
PRK00294173 PRK00294, hscB, co-chaperone HscB; Provisional 1e-22
COG1076174 COG1076, DjlA, DnaJ-domain-containing proteins 1 [ 2e-16
TIGR00714155 TIGR00714, hscB, Fe-S protein assembly co-chaperon 5e-16
PRK01356166 PRK01356, hscB, co-chaperone HscB; Provisional 2e-15
PRK01773173 PRK01773, hscB, co-chaperone HscB; Provisional 1e-14
pfam0774378 pfam07743, HSCB_C, HSCB C-terminal oligomerisation 2e-14
PRK14282 369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 2e-04
pfam0022663 pfam00226, DnaJ, DnaJ domain 5e-04
>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional Back     alignment and domain information 
 Score =  104 bits (262), Expect = 1e-27
 Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 17/168 (10%)

Query: 114 DYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTL 173
           D+F +FGL  ++ +    L+  Y+  Q ++HPD   +  + E+  A + + R  EAY+TL
Sbjct: 7   DHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTL 66

Query: 174 TNPLARAIYILRLEGVEVN-EDETVSEPELLMEIMEIREAVEDAADSQT----------L 222
            +PL RA Y+L L GV+V  E+ T   P  LM+ ME REA+EDA  ++           L
Sbjct: 67  RDPLKRARYLLHLRGVDVQAENNTAMPPAFLMQQMEWREAIEDARAARDVDALDALLAEL 126

Query: 223 KEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIA 270
           ++ + +   +L     +  D+    +   A   +R++ +  ++ +EI 
Sbjct: 127 RDERRERYAEL----GALLDSRG--DDQAAAEAVRQLMFIEKLAQEIG 168

Length = 176
>gnl|CDD|179914 PRK05014, hscB, co-chaperone HscB; Provisional Back     alignment and domain information
>gnl|CDD|166894 PRK00294, hscB, co-chaperone HscB; Provisional Back     alignment and domain information
>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional Back     alignment and domain information
>gnl|CDD|179335 PRK01773, hscB, co-chaperone HscB; Provisional Back     alignment and domain information
>gnl|CDD|219548 pfam07743, HSCB_C, HSCB C-terminal oligomerisation domain Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 273
PRK01773173 hscB co-chaperone HscB; Provisional 100.0
PRK03578176 hscB co-chaperone HscB; Provisional 100.0
PRK01356166 hscB co-chaperone HscB; Provisional 100.0
PRK05014171 hscB co-chaperone HscB; Provisional 100.0
PRK00294173 hscB co-chaperone HscB; Provisional 100.0
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 100.0
KOG3192168 consensus Mitochondrial J-type chaperone [Posttran 100.0
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 99.86
PF0774378 HSCB_C: HSCB C-terminal oligomerisation domain; In 99.75
COG0484 371 DnaJ DnaJ-class molecular chaperone with C-termina 99.66
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.61
KOG0713 336 consensus Molecular chaperone (DnaJ superfamily) [ 99.59
PRK14288 369 chaperone protein DnaJ; Provisional 99.51
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 99.5
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.48
PRK14282 369 chaperone protein DnaJ; Provisional 99.48
PRK14296 372 chaperone protein DnaJ; Provisional 99.47
PRK14286 372 chaperone protein DnaJ; Provisional 99.46
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 99.45
PRK14295 389 chaperone protein DnaJ; Provisional 99.45
PRK14297 380 chaperone protein DnaJ; Provisional 99.45
PRK14301 373 chaperone protein DnaJ; Provisional 99.45
PRK14279 392 chaperone protein DnaJ; Provisional 99.44
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.44
PRK14294 366 chaperone protein DnaJ; Provisional 99.43
PRK14287 371 chaperone protein DnaJ; Provisional 99.42
PRK14276 380 chaperone protein DnaJ; Provisional 99.42
PRK14298 377 chaperone protein DnaJ; Provisional 99.42
PRK14291 382 chaperone protein DnaJ; Provisional 99.42
PRK14280 376 chaperone protein DnaJ; Provisional 99.42
PRK14277 386 chaperone protein DnaJ; Provisional 99.42
PRK10767 371 chaperone protein DnaJ; Provisional 99.42
PRK14281 397 chaperone protein DnaJ; Provisional 99.41
PRK14299 291 chaperone protein DnaJ; Provisional 99.41
PRK14284 391 chaperone protein DnaJ; Provisional 99.41
PRK14278 378 chaperone protein DnaJ; Provisional 99.4
PRK14285 365 chaperone protein DnaJ; Provisional 99.39
PRK14290 365 chaperone protein DnaJ; Provisional 99.39
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 99.39
PTZ00037 421 DnaJ_C chaperone protein; Provisional 99.39
PRK14293 374 chaperone protein DnaJ; Provisional 99.39
PRK14300 372 chaperone protein DnaJ; Provisional 99.38
PRK14283 378 chaperone protein DnaJ; Provisional 99.37
PRK14292 371 chaperone protein DnaJ; Provisional 99.37
TIGR02349 354 DnaJ_bact chaperone protein DnaJ. This model repre 99.36
KOG0719 264 consensus Molecular chaperone (DnaJ superfamily) [ 99.36
PRK10266 306 curved DNA-binding protein CbpA; Provisional 99.36
KOG0712 337 consensus Molecular chaperone (DnaJ superfamily) [ 99.36
PRK14289 386 chaperone protein DnaJ; Provisional 99.35
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 99.31
KOG0691 296 consensus Molecular chaperone (DnaJ superfamily) [ 99.29
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 99.26
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 99.25
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 99.23
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 99.16
PHA03102153 Small T antigen; Reviewed 99.08
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 98.98
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 98.92
KOG0720 490 consensus Molecular chaperone (DnaJ superfamily) [ 98.87
KOG0722 329 consensus Molecular chaperone (DnaJ superfamily) [ 98.84
PTZ00100116 DnaJ chaperone protein; Provisional 98.71
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 98.69
PHA02624 647 large T antigen; Provisional 98.6
KOG0714 306 consensus Molecular chaperone (DnaJ superfamily) [ 98.59
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 98.52
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 98.41
COG5269 379 ZUO1 Ribosome-associated chaperone zuotin [Transla 98.02
KOG0568 342 consensus Molecular chaperone (DnaJ superfamily) [ 97.21
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 96.94
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 96.79
KOG0431453 consensus Auxilin-like protein and related protein 94.91
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 94.68
PF1324826 zf-ribbon_3: zinc-ribbon domain 93.68
PF14687112 DUF4460: Domain of unknown function (DUF4460) 93.15
PF1324023 zinc_ribbon_2: zinc-ribbon domain 91.02
PF09538108 FYDLN_acid: Protein of unknown function (FYDLN_aci 88.46
PRK14559 645 putative protein serine/threonine phosphatase; Pro 84.91
PF1057126 UPF0547: Uncharacterised protein family UPF0547; I 83.28
TIGR02300129 FYDLN_acid conserved hypothetical protein TIGR0230 80.01
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.3e-45  Score=315.68  Aligned_cols=160  Identities=25%  Similarity=0.430  Sum_probs=151.9

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHhh-CCcC
Q 024044          113 VDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLE-GVEV  191 (273)
Q Consensus       113 ~nyFellgl~~~f~Id~~~Lk~~Yr~Lqk~~HPDk~~~~~~~E~~~a~~~s~~IN~AY~tL~dP~~Ra~YlL~L~-G~~~  191 (273)
                      .|||++||||++|+||...|+++|++||+.+|||+|+++++.|+++|.++|+.||+||+||+||++||.|+|.|+ |+++
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~~g~~~   81 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALNTGEQQ   81 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhccCCCC
Confidence            589999999999999999999999999999999999999999999999999999999999999999999999999 8875


Q ss_pred             C-CCCCCCCHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHhHHHHHH
Q 024044          192 N-EDETVSEPELLMEIMEIREAVEDA---ADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFDEARVCIRRMTYYHRVNE  267 (273)
Q Consensus       192 ~-ee~~~~d~efLmeiME~rE~leea---~d~~~L~~l~~~~~~~i~~~~~~l~~af~~~d~~~A~~~l~kLkYl~ki~~  267 (273)
                      . ++.+..||+|||+||||||+||++   .|.++|++|..+++++++++.+.|+++|+.+||++|+..++||+||.||.+
T Consensus        82 ~~e~~~~~d~~fLme~ME~rE~lee~~~~~d~~~L~~l~~~v~~~~~~~~~~l~~~~~~~d~~~A~~~~~rL~y~~kl~~  161 (173)
T PRK01773         82 NLEEKSTQDMAFLMQQMEWREQLEEIEQQQDEDALTAFSKEIKQEQQAILTELSTALNSQQWQQASQINDRLRFIKKLII  161 (173)
T ss_pred             CcccccCCCHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            4 456778999999999999999986   367889999999999999999999999999999999999999999999999


Q ss_pred             HHHhh
Q 024044          268 EIAKK  272 (273)
Q Consensus       268 eI~~K  272 (273)
                      +|++.
T Consensus       162 ei~~~  166 (173)
T PRK01773        162 EIERV  166 (173)
T ss_pred             HHHHH
Confidence            99853

>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07743 HSCB_C: HSCB C-terminal oligomerisation domain; InterPro: IPR009073 This entry represents the C-terminal oligomerisation domain found in HscB (heat shock cognate protein B), which is also known as HSC20 (20K heat shock cognate protein) Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13248 zf-ribbon_3: zinc-ribbon domain Back     alignment and domain information
>PF14687 DUF4460: Domain of unknown function (DUF4460) Back     alignment and domain information
>PF13240 zinc_ribbon_2: zinc-ribbon domain Back     alignment and domain information
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines Back     alignment and domain information
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query273
3bvo_A207 Crystal Structure Of Human Co-Chaperone Protein Hsc 8e-25
1fpo_A171 Hsc20 (Hscb), A J-Type Co-Chaperone From E. Coli Le 2e-16
4it5_A174 Chaperone Hscb From Vibrio Cholerae Length = 174 2e-15
3uo3_A181 Jac1 Co-Chaperone From Saccharomyces Cerevisiae, 5- 6e-09
3uo2_A175 Jac1 Co-Chaperone From Saccharomyces Cerevisiae Len 6e-09
>pdb|3BVO|A Chain A, Crystal Structure Of Human Co-Chaperone Protein Hscb Length = 207 Back     alignment and structure 
Iteration: 1

 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 4/203 (1%)
Query: 74  SESAEKASN-ATCWNCNE--APKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNE 130
           S +++  SN   CWNC     P      FC  CR++Q  D + DYF +    + + +   
Sbjct: 1   SAASQAGSNYPRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLXDCNRSFRVDTA 60
Query: 131 KLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEGVE 190
           KL+ +Y+  Q+ +HPD    +S+ E++++ + S  V +AY+TL  PL+R +Y+L+L G+E
Sbjct: 61  KLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIE 120
Query: 191 VNE-DETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNF 249
           + E  +   + + L+EI EI E + +A      KEI+S ++ K   + ++ + A++  +F
Sbjct: 121 IPERTDYEXDRQFLIEIXEINEKLAEAESEAAXKEIESIVKAKQKEFTDNVSSAFEQDDF 180
Query: 250 DEARVCIRRMTYYHRVNEEIAKK 272
           +EA+  + +  Y+  + E+I  K
Sbjct: 181 EEAKEILTKXRYFSNIEEKIKLK 203
>pdb|1FPO|A Chain A, Hsc20 (Hscb), A J-Type Co-Chaperone From E. Coli Length = 171 Back     alignment and structure
>pdb|4IT5|A Chain A, Chaperone Hscb From Vibrio Cholerae Length = 174 Back     alignment and structure
>pdb|3UO3|A Chain A, Jac1 Co-Chaperone From Saccharomyces Cerevisiae, 5-182 Clone Length = 181 Back     alignment and structure
>pdb|3UO2|A Chain A, Jac1 Co-Chaperone From Saccharomyces Cerevisiae Length = 175 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query273
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 2e-52
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 2e-42
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 3e-40
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 3e-35
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 Back     alignment and structure
 Score =  169 bits (428), Expect = 2e-52
 Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 3/203 (1%)

Query: 74  SESAEKASNATCWNCNE--APKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEK 131
           + S   ++   CWNC     P      FC  CR++Q  D + DYF +    + + +   K
Sbjct: 2   AASQAGSNYPRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAK 61

Query: 132 LEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEGVEV 191
           L+ +Y+  Q+ +HPD    +S+ E++++ + S  V +AY+TL  PL+R +Y+L+L G+E+
Sbjct: 62  LQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEI 121

Query: 192 NEDE-TVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFADAYQNRNFD 250
            E      + + L+EIMEI E + +A     +KEI+S ++ K   + ++ + A++  +F+
Sbjct: 122 PERTDYEMDRQFLIEIMEINEKLAEAESEAAMKEIESIVKAKQKEFTDNVSSAFEQDDFE 181

Query: 251 EARVCIRRMTYYHRVNEEIAKKL 273
           EA+  + +M Y+  + E+I  K 
Sbjct: 182 EAKEILTKMRYFSNIEEKIKLKK 204
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query273
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 100.0
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 100.0
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 100.0
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 100.0
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.84
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.71
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.65
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.65
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.64
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.64
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.63
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.62
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.62
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.61
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.61
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.61
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.6
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.59
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.58
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.57
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.53
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 99.52
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.47
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.47
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 99.45
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 99.43
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.39
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 99.38
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.33
3lz8_A 329 Putative chaperone DNAJ; structure genomics, struc 99.28
2guz_A71 Mitochondrial import inner membrane translocase su 99.27
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.21
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 99.11
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 98.54
2guz_B65 Mitochondrial import inner membrane translocase su 97.97
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=6.6e-53  Score=373.73  Aligned_cols=194  Identities=31%  Similarity=0.690  Sum_probs=182.7

Q ss_pred             CCCCCCCCCCCC--CCCCCcccCCCCCCCCCCCCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCCCHHHHH
Q 024044           80 ASNATCWNCNEA--PKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKERE  157 (273)
Q Consensus        80 ~~~~~Cw~C~~~--~~~~~~~fC~~C~~iqp~~~~~nyFellgl~~~f~Id~~~Lk~~Yr~Lqk~~HPDk~~~~~~~E~~  157 (273)
                      .....||+|+..  +.....+||++|+++||++...|||++|||+++|++|..+|+++||+|++++|||++++.++.|++
T Consensus         8 ~~~~~Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~   87 (207)
T 3bvo_A            8 SNYPRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKD   87 (207)
T ss_dssp             ---CBCSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHH
T ss_pred             CCCCCCCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHH
Confidence            346899999985  245678999999999999989999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCcchhHHHHHHhhCCcCCCC-CCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q 024044          158 YAAEQSGRVIEAYRTLTNPLARAIYILRLEGVEVNED-ETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHW  236 (273)
Q Consensus       158 ~a~~~s~~IN~AY~tL~dP~~Ra~YlL~L~G~~~~ee-~~~~d~efLmeiME~rE~leea~d~~~L~~l~~~~~~~i~~~  236 (273)
                      .+.++|..||+||+||+||.+|+.|++.++|+++.++ ++.+||+|||++|||||+|+++.+.++|++|..+++++++++
T Consensus        88 ~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~~~~~e~~~~~d~~fLme~me~~E~le~~~~~~~l~~l~~~~~~~~~~~  167 (207)
T 3bvo_A           88 FSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIPERTDYEMDRQFLIEIMEINEKLAEAESEAAMKEIESIVKAKQKEF  167 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCCCSSCSSSSCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHHHHhcCCCcccccccCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998866 688999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCHHHHHHHHHHHHhHHHHHHHHHhhC
Q 024044          237 GNSFADAYQNRNFDEARVCIRRMTYYHRVNEEIAKKL  273 (273)
Q Consensus       237 ~~~l~~af~~~d~~~A~~~l~kLkYl~ki~~eI~~Kl  273 (273)
                      .+.|.++|+.+||++|++.++|||||.||.++|++|+
T Consensus       168 ~~~l~~~~~~~d~~~A~~~v~kL~y~~kl~~~i~~~~  204 (207)
T 3bvo_A          168 TDNVSSAFEQDDFEEAKEILTKMRYFSNIEEKIKLKK  204 (207)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999985
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 273
d1fpoa295 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligo 2e-16
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 3e-12
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure

class: All alpha proteins
fold: Open three-helical up-and-down bundle
superfamily: HSC20 (HSCB), C-terminal oligomerisation domain
family: HSC20 (HSCB), C-terminal oligomerisation domain
domain: HSC20 (HSCB), C-terminal oligomerisation domain
species: Escherichia coli [TaxId: 562]

 Score = 70.6 bits (173), Expect = 2e-16
 Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 192 NEDETVSEPELLMEIMEIREAVEDA---ADSQTLKEIQSQMQEKLIHWGNSFADAYQNRN 248
           +E  TV +   LME +E+RE +++     D   L+    ++++          +   N  
Sbjct: 5   SEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNET 64

Query: 249 FDEARVCIRRMTYYHRVNEEIAKK 272
           +D A    R++ +  ++     + 
Sbjct: 65  WDAAADTCRKLRFLDKLRSSAEQL 88
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query273
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.89
d1fpoa295 HSC20 (HSCB), C-terminal oligomerisation domain {E 99.76
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.72
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.65
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.6
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 99.53
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.51
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.41
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 99.19
d1yvia1142 Histidine-containing phosphotransfer protein HP1 { 80.92
d2a0ba_118 Aerobic respiration control sensor protein, ArcB { 80.57
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.1e-24  Score=159.62  Aligned_cols=76  Identities=39%  Similarity=0.717  Sum_probs=74.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHhhC
Q 024044          113 VDYFQIFGLGKKYEIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILRLEG  188 (273)
Q Consensus       113 ~nyFellgl~~~f~Id~~~Lk~~Yr~Lqk~~HPDk~~~~~~~E~~~a~~~s~~IN~AY~tL~dP~~Ra~YlL~L~G  188 (273)
                      +|||++|||+++|+||.++|+++|+++++.+|||++.+.++.++..+.+.++.||+||+||+||.+|++|+|+|+|
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~l~g   76 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHG   76 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTT
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHccC
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999988
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d2a0ba_ a.24.10.1 (A:) Aerobic respiration control sensor protein, ArcB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure