Citrus Sinensis ID: 024050
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 273 | 2.2.26 [Sep-21-2011] | |||||||
| C6TBN2 | 346 | Probable aldo-keto reduct | yes | no | 0.912 | 0.719 | 0.741 | 1e-108 | |
| Q3L181 | 337 | Perakine reductase OS=Rau | N/A | no | 0.919 | 0.744 | 0.683 | 1e-100 | |
| Q93ZN2 | 345 | Probable aldo-keto reduct | yes | no | 0.945 | 0.747 | 0.612 | 2e-83 | |
| O22707 | 345 | Probable aldo-keto reduct | no | no | 0.915 | 0.724 | 0.614 | 5e-83 | |
| F4HPY8 | 330 | Probable aldo-keto reduct | no | no | 0.802 | 0.663 | 0.666 | 2e-82 | |
| Q84M96 | 346 | Probable aldo-keto reduct | no | no | 0.919 | 0.725 | 0.602 | 8e-82 | |
| P40691 | 307 | Auxin-induced protein PCN | N/A | no | 0.849 | 0.755 | 0.641 | 1e-81 | |
| Q9ASZ9 | 345 | Probable aldo-keto reduct | no | no | 0.901 | 0.713 | 0.62 | 8e-81 | |
| A2XRZ0 | 351 | Probable aldo-keto reduct | N/A | no | 0.901 | 0.700 | 0.611 | 9e-80 | |
| Q7XT99 | 351 | Probable aldo-keto reduct | no | no | 0.904 | 0.703 | 0.605 | 1e-79 |
| >sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/251 (74%), Positives = 218/251 (86%), Gaps = 2/251 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+ VKLGTQG EVSKLG+GCM L+G Y+ P+ E+DGIS+IK+AFSKGITFFDTADVYG
Sbjct: 5 QIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NANE+L+GKALKQLPREKIQ+ATKFGIA G + ++G+P+YVRSCCE LKRLDV+YI
Sbjct: 65 NANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVEYI 124
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASP TIRRAHA+HPITAVQ+EWS
Sbjct: 125 DLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIEWS 184
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246
LWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGK VVENVP +S L + P + E L
Sbjct: 185 LWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL--KAHPRFQAENL 242
Query: 247 FSHREPCQKVQ 257
++ ++++
Sbjct: 243 DKNKNIYERIE 253
|
May interfere with the nodulation process and inhibits nodule development. Glycine max (taxid: 3847) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q3L181|PERR_RAUSE Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 214/262 (81%), Gaps = 11/262 (4%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+PRVKLGTQGLEVSKLG+GCM LSG Y+ + EE GI++IK AF+ GITFFDT+D+YG+N
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 68 -ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
+NE LLGKALKQLPREKIQV TKFGI IG +GV KG PDYVRSCCEASLKRLDVDYI
Sbjct: 61 GSNEELLGKALKQLPREKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYI 120
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DL+Y HR+DT+VPIE T+GE+KKLVEEGKIKY+GLSEASP TIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS-------FLVQRREP 239
LWTRDIE+EI+PLCR+LGIGIVPYSP+GRG F GKA+ E++P +S F+ + E
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFAGKAIKESLPENSVLTSHPRFVGENLEK 240
Query: 240 GQEQEY---LFSHREPCQKVQL 258
++ Y S + C VQL
Sbjct: 241 NKQIYYRIEALSQKHGCTPVQL 262
|
Aldo-keto reductase involved in the biosynthesis of monoterpenoid indole alkaloids. Broad substrate specificity enzyme with a high selectivity in the group of alkaloids. Can use perakine, 19(S),20(R)-dihydro-peraksine-17,21-al, cinnamic aldehyde, p-coumaric aldehyde and 3-(3,4,5-trimethoxyphenyl)propanal as substrates, but not ketosteroids such as progesterone. NADPH could not be replaced by NADH. Rauvolfia serpentina (taxid: 4060) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 7 |
| >sp|Q93ZN2|ALKR4_ARATH Probable aldo-keto reductase 4 OS=Arabidopsis thaliana GN=At1g60710 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/266 (61%), Positives = 194/266 (72%), Gaps = 8/266 (3%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D+YG
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NEVLLGKALK REK+++ATKFGI+ V+G P+YVR+ CEASLKRLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFGIS-YAEGKREVRGDPEYVRAACEASLKRLDIACID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQEQEYL 246
WTRD+EEEIIP CRELGIGIV YSPLGRGFF G +VEN+ D F ++ P ++E L
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF--RKALPRFQEENL 243
Query: 247 FSHREPCQKVQLHFCSTSPSMGSRTG 272
++ +KV C+ S G G
Sbjct: 244 DHNKIVYEKV----CAISEKKGCTPG 265
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|O22707|ALKR3_ARATH Probable aldo-keto reductase 3 OS=Arabidopsis thaliana GN=At1g60690 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 307 bits (786), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 190/254 (74%), Gaps = 4/254 (1%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF DT+D+
Sbjct: 3 ESCRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK REK+++ATKFGI+ +KG P YVR+ CEASLKRLDV
Sbjct: 63 YGPETNEILLGKALKDGVREKVELATKFGIS-YAEGNREIKGDPAYVRAACEASLKRLDV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPITAVQ+
Sbjct: 122 TCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPITAVQL 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQE 242
EWSLWTRD+EEEI+P CRELGIGIV YSPLGRGFF G +VEN+ + F ++ P +
Sbjct: 182 EWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF--RKALPRFQ 239
Query: 243 QEYLFSHREPCQKV 256
QE L ++ +KV
Sbjct: 240 QENLDHNKILYEKV 253
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|F4HPY8|AKR6_ARATH Probable aldo-keto reductase 6 OS=Arabidopsis thaliana GN=At1g60750 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/219 (66%), Positives = 174/219 (79%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MAEE QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF DT
Sbjct: 1 MAEEACQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
+D+YG NE+LLGKALK R+K+++ATKFGI +G P+YVR CEASLKR
Sbjct: 61 SDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLKR 120
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180
L V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA
Sbjct: 121 LGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITA 180
Query: 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219
VQ+EWSLW+RD+EE+IIP CRELGIGIV YSPLGRGF G
Sbjct: 181 VQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q84M96|ALKR2_ARATH Probable aldo-keto reductase 2 OS=Arabidopsis thaliana GN=AGD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (776), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 153/254 (60%), Positives = 190/254 (74%), Gaps = 3/254 (1%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM LS Y +P E D I+++ HA + G+TFFDT+D+
Sbjct: 3 EACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK +EK+++ATKFG + V+G P+YVR+ CEASLKRLD+
Sbjct: 63 YGPETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDI 122
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+
Sbjct: 123 ACIDLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQI 182
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLVQRREPGQE 242
EWSLW+RD EE+IIP+CRELGIGIV YSPLGRGF G + EN+ D F ++ P +
Sbjct: 183 EWSLWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF--RKTLPRFQ 240
Query: 243 QEYLFSHREPCQKV 256
QE + ++ +KV
Sbjct: 241 QENVDHNKILFEKV 254
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P40691|A115_TOBAC Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (775), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 179/237 (75%), Gaps = 5/237 (2%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA+E +VPR+KLG+QGLEVS G GCM +S Y P E D I +I HA + GIT DT
Sbjct: 1 MAKEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFGIA----GIGVAGVIVKGAPDYVRSCCEA 116
+DVYG + NE+LLGKALK RE++ +ATKFGI V G P YVR+ CEA
Sbjct: 61 SDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEA 120
Query: 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH 176
SLKRLD+D IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS TIRRAHAVH
Sbjct: 121 SLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVH 180
Query: 177 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSF 232
PITAVQ+EWSLW+RD+EEEIIP CRELGIGIV YSPLGRGF G ++E++ + +
Sbjct: 181 PITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDY 237
|
Nicotiana tabacum (taxid: 4097) |
| >sp|Q9ASZ9|ALKR5_ARATH Probable aldo-keto reductase 5 OS=Arabidopsis thaliana GN=At1g60730 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (768), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 155/250 (62%), Positives = 187/250 (74%), Gaps = 4/250 (1%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+TF DT+D+YG
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSAFYGTPKPETEAIALIHHAIHSGVTFLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NE+LL KALK REK+++ATK+GI V KG P YVR+ CEASL R+DV ID
Sbjct: 67 TNELLLSKALKDGVREKVELATKYGIR-YAEGKVEFKGDPAYVRAACEASLMRVDVACID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHR+DT VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA+Q+EWSL
Sbjct: 126 LYYQHRIDTRVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITALQIEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQEQEYL 246
W+RD+EE+IIP CRELGIGIV YSPLGRGFF G +VEN+ D+ V++ P +QE L
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGRGFFASGPKLVENL--DNNDVRKTLPRFQQENL 243
Query: 247 FSHREPCQKV 256
++ +KV
Sbjct: 244 DHNKILFEKV 253
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A2XRZ0|AKR2_ORYSI Probable aldo-keto reductase 2 OS=Oryza sativa subsp. indica GN=OsI_15387 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (758), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 154/252 (61%), Positives = 188/252 (74%), Gaps = 6/252 (2%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D+YG +
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIA-GIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NE+LLGKAL+ R+K+++ATKFGIA G GV +G P YVR+ CE SL+RL VD I
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIAFEDGKRGV--RGDPAYVRAACEGSLRRLGVDSI 128
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWS
Sbjct: 129 DLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWS 188
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLVQRREPGQEQEY 245
LW+RD+EE+IIP CRELGIGIV YSPLGRGFF G +VE++ F ++ P +QE
Sbjct: 189 LWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF--RKHIPRFQQEN 246
Query: 246 LFSHREPCQKVQ 257
L + E ++V
Sbjct: 247 LEKNAEIFERVN 258
|
Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q7XT99|AKR2_ORYSJ Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 296 bits (758), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/251 (60%), Positives = 186/251 (74%), Gaps = 4/251 (1%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D+YG +
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NE+LLGKAL+ R+K+++ATKFGIA V+G P YVR+ CE SL+RL VD ID
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIA-FEDGKRDVRGDPAYVRAACEGSLRRLGVDSID 129
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 130 LYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSL 189
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLVQRREPGQEQEYL 246
W+RD+EE+IIP CRELGIGIV YSPLGRGFF G +VE++ F ++ P +QE L
Sbjct: 190 WSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF--RKHIPRFQQENL 247
Query: 247 FSHREPCQKVQ 257
+ E ++V
Sbjct: 248 EKNAEIFERVN 258
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 273 | ||||||
| 378548275 | 346 | RecName: Full=Probable aldo-keto reducta | 0.912 | 0.719 | 0.741 | 1e-107 | |
| 225451318 | 343 | PREDICTED: auxin-induced protein PCNT115 | 0.831 | 0.661 | 0.824 | 1e-107 | |
| 356571605 | 345 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.912 | 0.721 | 0.745 | 1e-106 | |
| 255542314 | 343 | aldo/keto reductase, putative [Ricinus c | 0.857 | 0.682 | 0.769 | 1e-106 | |
| 225451312 | 342 | PREDICTED: auxin-induced protein PCNT115 | 0.937 | 0.748 | 0.726 | 1e-105 | |
| 110289083 | 249 | Auxin-induced protein PCNT115, putative, | 0.897 | 0.983 | 0.725 | 1e-105 | |
| 359487894 | 362 | PREDICTED: auxin-induced protein PCNT115 | 0.831 | 0.627 | 0.815 | 1e-104 | |
| 356573095 | 346 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.835 | 0.658 | 0.799 | 1e-104 | |
| 298204875 | 342 | unnamed protein product [Vitis vinifera] | 0.831 | 0.663 | 0.815 | 1e-104 | |
| 78708648 | 343 | Auxin-induced protein PCNT115, putative, | 0.849 | 0.676 | 0.754 | 1e-104 |
| >gi|378548275|sp|C6TBN2.1|AKR1_SOYBN RecName: Full=Probable aldo-keto reductase 1; Short=GmAKR1 gi|255637828|gb|ACU19234.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/251 (74%), Positives = 218/251 (86%), Gaps = 2/251 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+ VKLGTQG EVSKLG+GCM L+G Y+ P+ E+DGIS+IK+AFSKGITFFDTADVYG
Sbjct: 5 QIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NANE+L+GKALKQLPREKIQ+ATKFGIA G + ++G+P+YVRSCCE LKRLDV+YI
Sbjct: 65 NANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVEYI 124
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASP TIRRAHA+HPITAVQ+EWS
Sbjct: 125 DLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIEWS 184
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246
LWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGK VVENVP +S L + P + E L
Sbjct: 185 LWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL--KAHPRFQAENL 242
Query: 247 FSHREPCQKVQ 257
++ ++++
Sbjct: 243 DKNKNIYERIE 253
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451318|ref|XP_002273776.1| PREDICTED: auxin-induced protein PCNT115 [Vitis vinifera] gi|298204867|emb|CBI34174.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/228 (82%), Positives = 211/228 (92%), Gaps = 1/228 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG+GCM L+G Y+ PVSE+ GIS+IK+AFSKGITFFDT+DVYG
Sbjct: 5 QIPRVKLGNQGLEVSKLGFGCMGLTGEYNHPVSEDVGISIIKYAFSKGITFFDTSDVYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIA-GIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
NANE+L+GKALK+LPREKIQ+ATKFG+A G AG+IVKG P+YVRS C ASLKR+DV+Y
Sbjct: 65 NANEILVGKALKELPREKIQLATKFGVAPGDYTAGIIVKGTPEYVRSSCVASLKRIDVEY 124
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHRVD SVPIEET+GE+KKLVEEGKIKYIGLSEASP TIRRAHAVHPITA+QMEW
Sbjct: 125 IDLYYQHRVDRSVPIEETMGELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITALQMEW 184
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
SLWTR+IEEEI+PLCRELGIGIVPYSPLGRGFFGGKAV ENVPA+S L
Sbjct: 185 SLWTREIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVSENVPANSLL 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571605|ref|XP_003553967.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/251 (74%), Positives = 217/251 (86%), Gaps = 2/251 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLGTQGLEVSKLGYGCM L+G Y+ P+ EE+GIS+IKHAFSKGITFFDT+D+YG
Sbjct: 6 QMPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISVIKHAFSKGITFFDTSDMYGP 65
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
+ANE++LGKA+KQLPREKIQ+ATKFGI I +G++VKG P+Y RSCCEASLKRL V+YI
Sbjct: 66 HANEIVLGKAIKQLPREKIQIATKFGITKIDSSGMVVKGTPEYARSCCEASLKRLGVEYI 125
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASP TIRRAHAVHPITAVQMEWS
Sbjct: 126 DLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQMEWS 185
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246
LWTRDIE+EIIPLC+ELGIGIVPYSPLGRGFFGGK V+E V S L+ P + E L
Sbjct: 186 LWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLITH--PRFQAENL 243
Query: 247 FSHREPCQKVQ 257
++ K++
Sbjct: 244 DKNKNXYDKIE 254
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542314|ref|XP_002512220.1| aldo/keto reductase, putative [Ricinus communis] gi|223548181|gb|EEF49672.1| aldo/keto reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/234 (76%), Positives = 210/234 (89%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA+E Q+PR KLG+QGLEVSKLG+GCM L+G Y+SP+S+EDGIS+++HAF KGITFFDT
Sbjct: 1 MAQENFQIPRTKLGSQGLEVSKLGFGCMGLTGVYNSPLSDEDGISILRHAFDKGITFFDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
+DVYG + NE+L+GKALKQLPREK+Q+ATKFGI + +IV G P+YVRS CEASLKR
Sbjct: 61 SDVYGPHTNEILVGKALKQLPREKVQLATKFGIVKMPPPKMIVNGIPEYVRSSCEASLKR 120
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180
L +DYIDLYYQHRVDTSVPIEET+ E+KKLVEEGKIKYIGLSEASP TIRRAHAVHPITA
Sbjct: 121 LGIDYIDLYYQHRVDTSVPIEETMSELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITA 180
Query: 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
+Q+EWSLWTRD+EEEI+PLC+ELGIGIVPYSPLGRGFF GK VVE +PA+S LV
Sbjct: 181 LQIEWSLWTRDVEEEIVPLCKELGIGIVPYSPLGRGFFAGKGVVERLPANSMLV 234
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451312|ref|XP_002278643.1| PREDICTED: auxin-induced protein PCNT115 [Vitis vinifera] gi|298204874|emb|CBI34181.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/263 (72%), Positives = 218/263 (82%), Gaps = 7/263 (2%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG+GCM LSG Y++PV ++ GI++IKHAFSKGITFFDTADVYG
Sbjct: 5 QIPRVKLGNQGLEVSKLGFGCMGLSGVYNNPVPDDVGIAIIKHAFSKGITFFDTADVYGP 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDY 125
NEVL+GKALK+LPREKIQ+ATKFGIAG A G+ V G P YVRSCCEASLKRLDV+Y
Sbjct: 65 FTNEVLIGKALKELPREKIQLATKFGIAGFDPATGMTVNGTPKYVRSCCEASLKRLDVEY 124
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHRVD SVPIEET+ E+KKLV EGKIKYIGLSE SP TIRRAHAVHPITA+QMEW
Sbjct: 125 IDLYYQHRVDKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHAVHPITALQMEW 184
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEY 245
SLWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGK V EN PA++FL R P + E
Sbjct: 185 SLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFL--RLNPRFQGEN 242
Query: 246 LFSHREPCQKVQL----HFCSTS 264
++ K+++ H C+ +
Sbjct: 243 FEKNKNIYTKMEMLAEKHRCTPA 265
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110289083|gb|ABG66079.1| Auxin-induced protein PCNT115, putative, expressed [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/248 (72%), Positives = 215/248 (86%), Gaps = 3/248 (1%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E Q+PRVKLGTQGLEVSKLG+GCM L+G Y++PV+EEDG+++++ AF G+TFFDT+D
Sbjct: 2 EHVQIPRVKLGTQGLEVSKLGFGCMGLTGVYNAPVAEEDGVAVVRRAFEAGVTFFDTSDA 61
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG + NEVLLGKALKQLPREK+QVATKFGIAG G++VKG PDYVR+CCEASL+RL V
Sbjct: 62 YGPHTNEVLLGKALKQLPREKVQVATKFGIAGFDANGMLVKGTPDYVRACCEASLERLAV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
DYIDLYYQHR+D SVPIEET+GE+KKLVEEGK+K++GLSEAS TIRRAHAV+PITAVQM
Sbjct: 122 DYIDLYYQHRIDQSVPIEETMGELKKLVEEGKVKFVGLSEASADTIRRAHAVYPITAVQM 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQ 243
EWSLWTRDIEEEIIPLCRELGIGIVPYSP+GRGFF G+A V+++P++S+LV+
Sbjct: 182 EWSLWTRDIEEEIIPLCRELGIGIVPYSPIGRGFFAGRAAVQSIPSESWLVKL---NSHY 238
Query: 244 EYLFSHRE 251
L HRE
Sbjct: 239 YNLLLHRE 246
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487894|ref|XP_002273300.2| PREDICTED: auxin-induced protein PCNT115-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/228 (81%), Positives = 206/228 (90%), Gaps = 1/228 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG GC LSGGY++PV ++ GI++IKHAFSKGITFFDTAD YG
Sbjct: 10 QLPRVKLGNQGLEVSKLGLGCRGLSGGYNNPVPDDVGIAIIKHAFSKGITFFDTADAYGA 69
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDY 125
ANEVL+GKALK+LPREKIQ+ATKFG AG A G+IV G P YVRSCCEASLK LDV+Y
Sbjct: 70 QANEVLIGKALKELPREKIQLATKFGHAGFDPATGLIVNGTPKYVRSCCEASLKCLDVEY 129
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHR+D SVPIEET+GE+KKLVEE KIKYIGLSEASP TIRRA+AVHP+TA+QMEW
Sbjct: 130 IDLYYQHRIDKSVPIEETMGELKKLVEEEKIKYIGLSEASPDTIRRAYAVHPVTALQMEW 189
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
SLWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGKAV ENVPA+SFL
Sbjct: 190 SLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVDENVPANSFL 237
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573095|ref|XP_003554700.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/229 (79%), Positives = 207/229 (90%), Gaps = 1/229 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG- 65
++PRVKLGTQGLEVSKLGYGCM L+G Y+ P+ EE+GIS+IKHAFSKGITFFDT+D+YG
Sbjct: 6 EIPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISIIKHAFSKGITFFDTSDIYGP 65
Query: 66 QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
+ANE+++GKALKQLPREKIQ+ATKFGI I +G+ VKG P+Y RSCCEASLKRL V+Y
Sbjct: 66 DHANEIVVGKALKQLPREKIQIATKFGITKIDSSGMFVKGTPEYARSCCEASLKRLGVEY 125
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASP TIRRAHAVHPITAVQMEW
Sbjct: 126 IDLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQMEW 185
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV 234
SLWTRDIE+EIIPLC+ELGIGIVPYSPLGRGFFGGK V+E V S LV
Sbjct: 186 SLWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLV 234
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298204875|emb|CBI34182.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/228 (81%), Positives = 206/228 (90%), Gaps = 1/228 (0%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+PRVKLG QGLEVSKLG GC LSGGY++PV ++ GI++IKHAFSKGITFFDTAD YG
Sbjct: 5 QLPRVKLGNQGLEVSKLGLGCRGLSGGYNNPVPDDVGIAIIKHAFSKGITFFDTADAYGA 64
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVA-GVIVKGAPDYVRSCCEASLKRLDVDY 125
ANEVL+GKALK+LPREKIQ+ATKFG AG A G+IV G P YVRSCCEASLK LDV+Y
Sbjct: 65 QANEVLIGKALKELPREKIQLATKFGHAGFDPATGLIVNGTPKYVRSCCEASLKCLDVEY 124
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYYQHR+D SVPIEET+GE+KKLVEE KIKYIGLSEASP TIRRA+AVHP+TA+QMEW
Sbjct: 125 IDLYYQHRIDKSVPIEETMGELKKLVEEEKIKYIGLSEASPDTIRRAYAVHPVTALQMEW 184
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL 233
SLWTRDIEEEI+PLCRELGIGIVPYSPLGRGFFGGKAV ENVPA+SFL
Sbjct: 185 SLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVDENVPANSFL 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|78708648|gb|ABB47623.1| Auxin-induced protein PCNT115, putative, expressed [Oryza sativa Japonica Group] gi|215693877|dbj|BAG89076.1| unnamed protein product [Oryza sativa Japonica Group] gi|218184528|gb|EEC66955.1| hypothetical protein OsI_33599 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/232 (75%), Positives = 210/232 (90%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E Q+PRVKLGTQGLEVSKLG+GCM L+G Y++PV+EEDG+++++ AF G+TFFDT+D
Sbjct: 2 EHVQIPRVKLGTQGLEVSKLGFGCMGLTGVYNAPVAEEDGVAVVRRAFEAGVTFFDTSDA 61
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDV 123
YG + NEVLLGKALKQLPREK+QVATKFGIAG G++VKG PDYVR+CCEASL+RL V
Sbjct: 62 YGPHTNEVLLGKALKQLPREKVQVATKFGIAGFDANGMLVKGTPDYVRACCEASLERLAV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
DYIDLYYQHR+D SVPIEET+GE+KKLVEEGK+K++GLSEAS TIRRAHAV+PITAVQM
Sbjct: 122 DYIDLYYQHRIDQSVPIEETMGELKKLVEEGKVKFVGLSEASADTIRRAHAVYPITAVQM 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ 235
EWSLWTRDIEEEIIPLCRELGIGIVPYSP+GRGFF G+A V+++P++S+L +
Sbjct: 182 EWSLWTRDIEEEIIPLCRELGIGIVPYSPIGRGFFAGRAAVQSIPSESWLTR 233
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 273 | ||||||
| TAIR|locus:2036504 | 345 | ATB2 [Arabidopsis thaliana (ta | 0.945 | 0.747 | 0.597 | 3.9e-76 | |
| TAIR|locus:2036611 | 345 | AT1G60690 "AT1G60690" [Arabido | 0.915 | 0.724 | 0.598 | 1.2e-74 | |
| TAIR|locus:2036551 | 330 | AT1G60750 [Arabidopsis thalian | 0.864 | 0.715 | 0.616 | 1.5e-74 | |
| TAIR|locus:2036591 | 346 | AT1G60680 "AT1G60680" [Arabido | 0.919 | 0.725 | 0.590 | 4e-74 | |
| TAIR|locus:2196446 | 344 | AT1G10810 "AT1G10810" [Arabido | 0.901 | 0.715 | 0.576 | 5.6e-68 | |
| TIGR_CMR|SPO_A0345 | 327 | SPO_A0345 "oxidoreductase, ald | 0.765 | 0.639 | 0.535 | 1.3e-52 | |
| TIGR_CMR|GSU_3126 | 334 | GSU_3126 "oxidoreductase, aldo | 0.761 | 0.622 | 0.506 | 2.4e-51 | |
| UNIPROTKB|G4NAH9 | 341 | MGG_09715 "Aldo-keto reductase | 0.772 | 0.618 | 0.445 | 3.9e-44 | |
| POMBASE|SPAC1F7.12 | 340 | yak3 "aldose reductase ARK13 f | 0.897 | 0.720 | 0.414 | 1.7e-43 | |
| ASPGD|ASPL0000072041 | 351 | AN8733 [Emericella nidulans (t | 0.758 | 0.589 | 0.413 | 4.2e-40 |
| TAIR|locus:2036504 ATB2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 159/266 (59%), Positives = 188/266 (70%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D+YG
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYID 127
NEVLLGKALK REK+++ATKF P+YVR+ CEASLKRLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFGISYAEGKREVRGD-PEYVRAACEASLKRLDIACID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQEQEYL 246
WTRD+EEEIIP CRELGIGIV YSPLGRGFF G +VEN+ D F ++ P ++E L
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF--RKALPRFQEENL 243
Query: 247 FSHREPCQKVQLHFCSTSPSMGSRTG 272
++ +KV C+ S G G
Sbjct: 244 DHNKIVYEKV----CAISEKKGCTPG 265
|
|
| TAIR|locus:2036611 AT1G60690 "AT1G60690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 152/254 (59%), Positives = 184/254 (72%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF DT+D+
Sbjct: 3 ESCRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK REK+++ATKF P YVR+ CEASLKRLDV
Sbjct: 63 YGPETNEILLGKALKDGVREKVELATKFGISYAEGNREIKGD-PAYVRAACEASLKRLDV 121
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPITAVQ+
Sbjct: 122 TCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPITAVQL 181
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQE 242
EWSLWTRD+EEEI+P CRELGIGIV YSPLGRGFF G +VEN+ + F ++ P +
Sbjct: 182 EWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF--RKALPRFQ 239
Query: 243 QEYLFSHREPCQKV 256
QE L ++ +KV
Sbjct: 240 QENLDHNKILYEKV 253
|
|
| TAIR|locus:2036551 AT1G60750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 146/237 (61%), Positives = 178/237 (75%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MAEE QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF DT
Sbjct: 1 MAEEACQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLDT 60
Query: 61 ADVYGQNANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKR 120
+D+YG NE+LLGKALK R+K+++ATKF P+YVR CEASLKR
Sbjct: 61 SDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLKR 120
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180
L V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA
Sbjct: 121 LGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITA 180
Query: 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQR 236
VQ+EWSLW+RD+EE+IIP CRELGIGIV YSPLGRGF G + EN+ + L ++
Sbjct: 181 VQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLGLPRFQQENLENNKILYEK 237
|
|
| TAIR|locus:2036591 AT1G60680 "AT1G60680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 150/254 (59%), Positives = 185/254 (72%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
E +V R+KLG+QGLEVS G GCM LS Y +P E D I+++ HA + G+TFFDT+D+
Sbjct: 3 EACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDM 62
Query: 64 YGQNANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDV 123
YG NE+LLGKALK +EK+++ATKF P+YVR+ CEASLKRLD+
Sbjct: 63 YGPETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDI 122
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183
IDLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+
Sbjct: 123 ACIDLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQI 182
Query: 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQE 242
EWSLW+RD EE+IIP+CRELGIGIV YSPLGRGF G + EN+ D F ++ P +
Sbjct: 183 EWSLWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF--RKTLPRFQ 240
Query: 243 QEYLFSHREPCQKV 256
QE + ++ +KV
Sbjct: 241 QENVDHNKILFEKV 254
|
|
| TAIR|locus:2196446 AT1G10810 "AT1G10810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 144/250 (57%), Positives = 177/250 (70%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+KLG+QGLEVS G GCM LS + E D I++I HA + GIT DT+D+YG
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSIFDGTTKVETDLIALIHHAINSGITLLDTSDIYGPE 66
Query: 68 ANEVLLGKALKQLPREKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYID 127
NE+LLG+ALK REK+++ATKF P YVR+ CEASL+RL V ID
Sbjct: 67 TNELLLGQALKDGMREKVELATKFGLLLKDQKLGYRGD-PAYVRAACEASLRRLGVSCID 125
Query: 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
LYYQHR+DT+VPIE TIGE+KKLVEEGKIKYIGLSEA TIRRAHAVHP+TAVQ+EWSL
Sbjct: 126 LYYQHRIDTTVPIEVTIGELKKLVEEGKIKYIGLSEACASTIRRAHAVHPLTAVQLEWSL 185
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG-GKAVVENVPADSFLVQRREPGQEQEYL 246
W+RD+EE+IIP CRELGIGIV YSPLG GFF G +E++ + ++ P +QE L
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGLGFFAAGPKFIESMDNGDY--RKGLPRFQQENL 243
Query: 247 FSHREPCQKV 256
++ +KV
Sbjct: 244 DHNKILYEKV 253
|
|
| TIGR_CMR|SPO_A0345 SPO_A0345 "oxidoreductase, aldo/keto reductase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 114/213 (53%), Positives = 141/213 (66%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
R KLG Q LEVS +G GCM +S Y P +E + ++ A GI FFDTAD+YG + N
Sbjct: 3 RRKLG-QDLEVSAIGLGCMGMSEFYG-PRDDEKSLDVMSRAVVLGIDFFDTADMYGPHHN 60
Query: 70 EVLLGKALKQLPREKIQVATKFXXXXX-XXXXXXXXXXPDYVRSCCEASLKRLDVDYIDL 128
E L+G L+Q R +IQVATKF Y R+ CE SL+RL VD IDL
Sbjct: 61 EELIGTFLRQ-SRARIQVATKFGIVRNPGEYKRSLDNSASYARTACEGSLRRLGVDCIDL 119
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
YY HRV+T+ PIEET+ + LV+EGKI IGL E S T+RRAHAVHP+TAVQ E+SLW
Sbjct: 120 YYVHRVNTNQPIEETMEGLAALVKEGKIARIGLCEVSAETLRRAHAVHPVTAVQTEYSLW 179
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+R++E ++P CR LGIG VPYSPLGRGF G+
Sbjct: 180 SREVENSVLPTCRALGIGFVPYSPLGRGFLTGR 212
|
|
| TIGR_CMR|GSU_3126 GSU_3126 "oxidoreductase, aldo/keto reductase family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 109/215 (50%), Positives = 141/215 (65%)
Query: 13 LGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72
LG GLEVS LG GCM +S Y P E+ I++++ A +GITFFDTA+VYG NE L
Sbjct: 6 LGKSGLEVSALGLGCMGMSFSYGPPKDREEMIALLRTAVERGITFFDTAEVYGPFINEEL 65
Query: 73 LGKALKQLPREKIQVATKFXXXXXXXXXXXXX------XXPDYVRSCCEASLKRLDVDYI 126
+G+AL L RE++ +ATKF P+++R+ EASL+RL D I
Sbjct: 66 VGEALAPL-RERVVIATKFGFDTSVDPRAMKGQGPVLNSRPEHIRAVAEASLRRLRTDVI 124
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DL+YQHRVD +VPIEE G +K+L+ EGK+K+ GLSEA T+RRAHAV P+ VQ E+S
Sbjct: 125 DLFYQHRVDPAVPIEEVAGAVKELIREGKVKHFGLSEAGIETVRRAHAVQPVACVQNEYS 184
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
LW R EE ++ ELGIG+V YSPLG+GF GK
Sbjct: 185 LWFRRPEEGLLQALEELGIGLVAYSPLGKGFLTGK 219
|
|
| UNIPROTKB|G4NAH9 MGG_09715 "Aldo-keto reductase yakc" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 98/220 (44%), Positives = 135/220 (61%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
Q+P ++G G EV+ +G+G M LS GY + SEE+ ++ A+ G T +DTAD+YG
Sbjct: 6 QIPTRRMGKDGPEVACIGFGLMGLSFGYGAVESEEERFKVLDRAWEIGATNWDTADIYGD 65
Query: 67 NANEVLLGKALKQLP--REKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVD 124
+ E L+GK K P R+ I +ATKF P+Y R S +RL VD
Sbjct: 66 S--EDLVGKWFKMHPERRKDIFLATKFGVTGTIENLSANSS-PEYCRQASRRSFERLGVD 122
Query: 125 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184
Y+DLYY HR+ SVP+E+TI M +LV+EGK+KY+G+SE S ++RRAH VHPI AVQ+E
Sbjct: 123 YVDLYYVHRLTESVPVEKTIEAMAELVKEGKVKYLGMSECSSSSVRRAHKVHPIAAVQVE 182
Query: 185 WSLWTRDIEEE----IIPLCRELGIGIVPYSPLGRGFFGG 220
++ W IE + ++ CRELGI +V YSP RG G
Sbjct: 183 YNPWDLAIEGDEGTNLLATCRELGISVVAYSPFSRGLLTG 222
|
|
| POMBASE|SPAC1F7.12 yak3 "aldose reductase ARK13 family YakC" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 106/256 (41%), Positives = 148/256 (57%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+P K+G V +G+GCM L Y P SEE +++ HA G TF+D++D+YG
Sbjct: 3 IPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFG 59
Query: 68 ANEVLLGKALKQLPREK-IQVATKFXXXXX-XXXXXXXXXXPDYVRSCCEASLKRLDVDY 125
ANE +G+ KQ R K I +ATKF PDY+ + SLKRL +D
Sbjct: 60 ANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDC 119
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEW 185
IDLYY HR PIE+ +G +KK VE GKI+YIGLSE S TIRRA AV+P++AVQ+E+
Sbjct: 120 IDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEY 179
Query: 186 SLWTRDIEEE---IIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLVQRREPGQ 241
S ++ +IE ++ CRE I IV Y+PLGRGF G ++ P F +R+ P
Sbjct: 180 SPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDF--RRKAPRY 237
Query: 242 EQEYLFSHREPCQKVQ 257
++E + + E K++
Sbjct: 238 QKENFYKNLELVTKIE 253
|
|
| ASPGD|ASPL0000072041 AN8733 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 88/213 (41%), Positives = 132/213 (61%)
Query: 14 GTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLL 73
G +V +G G +LSG Y S E +S++ +A++ G+ F+D AD+YG +A +++
Sbjct: 11 GPDAPQVPCMGLGFGSLSGFYGPAGSPESRLSLLDNAYAAGLRFWDLADIYG-DAEDLVS 69
Query: 74 GKALKQLP--REKIQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQ 131
+ P R+ + +ATKF PDYV+ CE SLKRL V+ IDLYY
Sbjct: 70 EWVKRSDPAKRDDVFIATKFGLQRQADGMHRFRSDPDYVKEACERSLKRLGVNTIDLYYC 129
Query: 132 HRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD 191
HRVD P+E T+ M L ++GKI+++GLS+ S T+RRAHAVHPI A+Q+E+SL+T D
Sbjct: 130 HRVDGVTPVERTVEAMVDLKKQGKIRHLGLSDISASTLRRAHAVHPIAALQVEYSLFTLD 189
Query: 192 IEE---EIIPLCRELGIGIVPYSPLGRGFFGGK 221
IE +++ RELG+ ++ +SP+GRG G+
Sbjct: 190 IESSESDVLQTARELGVTVIAFSPIGRGILSGQ 222
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C6TBN2 | AKR1_SOYBN | 1, ., 1, ., 1, ., - | 0.7410 | 0.9120 | 0.7196 | yes | no |
| Q93ZN2 | ALKR4_ARATH | 1, ., 1, ., 1, ., - | 0.6127 | 0.9450 | 0.7478 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 273 | |||
| cd06660 | 285 | cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) | 3e-89 | |
| COG0667 | 316 | COG0667, Tas, Predicted oxidoreductases (related t | 2e-85 | |
| pfam00248 | 277 | pfam00248, Aldo_ket_red, Aldo/keto reductase famil | 5e-70 | |
| COG0656 | 280 | COG0656, ARA1, Aldo/keto reductases, related to di | 1e-38 | |
| COG4989 | 298 | COG4989, COG4989, Predicted oxidoreductase [Genera | 1e-31 | |
| PLN02587 | 314 | PLN02587, PLN02587, L-galactose dehydrogenase | 7e-30 | |
| COG1453 | 391 | COG1453, COG1453, Predicted oxidoreductases of the | 3e-28 | |
| PRK09912 | 346 | PRK09912, PRK09912, L-glyceraldehyde 3-phosphate r | 1e-21 | |
| TIGR01293 | 317 | TIGR01293, Kv_beta, voltage-dependent potassium ch | 4e-21 | |
| PRK10625 | 346 | PRK10625, tas, putative aldo-keto reductase; Provi | 7e-20 | |
| PRK10376 | 290 | PRK10376, PRK10376, putative oxidoreductase; Provi | 2e-17 | |
| PRK11565 | 275 | PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A | 2e-10 | |
| PRK11172 | 267 | PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B | 2e-07 |
| >gnl|CDD|119408 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Score = 265 bits (681), Expect = 3e-89
Identities = 97/231 (41%), Positives = 132/231 (57%), Gaps = 11/231 (4%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
LG GL+VS+LG G L GGY V EE+ + ++ A GI F DTADVYG +
Sbjct: 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGES 57
Query: 70 EVLLGKALKQLP-REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
E LLG+ALK+ RE++ +ATK G +P+++R E SLKRL DYIDL
Sbjct: 58 EELLGEALKERGPREEVFIATKVGPRPGDGRD----LSPEHIRRAVEESLKRLGTDYIDL 113
Query: 129 YYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEW 185
Y H D P IEET+ +++LV+EGKI+ IG+S S + A A P Q+E+
Sbjct: 114 YLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAEQLEEALAAAGVPPAVNQVEY 173
Query: 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQR 236
+L R EEE++P CRE GIG++ YSPL G GK + P + L++
Sbjct: 174 NLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGDLLEA 224
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. Length = 285 |
| >gnl|CDD|223739 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-85
Identities = 103/239 (43%), Positives = 139/239 (58%), Gaps = 4/239 (1%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+LG GL+VS LG G M L G E + I ++ A GI FFDTADVYG +E
Sbjct: 4 RRLGRSGLKVSPLGLGTMTLGGDTDDE-EEAEAIEILDAALDAGINFFDTADVYGDGRSE 62
Query: 71 VLLGKALKQLP-REKIQVATKFG-IAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
+LG+ALK+ R+K+ +ATK G G + + D++R EASLKRL DYIDL
Sbjct: 63 EILGEALKERGRRDKVVIATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDL 122
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-HPITAVQMEWSL 187
Y HR D PIEET+ + +LV EGKI+YIG+S S I A AV PI ++Q E++L
Sbjct: 123 YQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYSAEQIAEALAVAAPIDSLQPEYNL 182
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246
RD E+E++PLCRE GIG++ YSPL G GK + + + + R + + L
Sbjct: 183 LERDAEKELLPLCREEGIGLLAYSPLASGLLTGKYLPGPEGSRASELPRFQRELTERGL 241
|
Length = 316 |
| >gnl|CDD|215817 pfam00248, Aldo_ket_red, Aldo/keto reductase family | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 5e-70
Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 10/203 (4%)
Query: 22 KLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQL- 80
+LG G +L G +S+E+ + +++ A GI DTA+VYG +E LLG+ALK+
Sbjct: 1 RLGLGTWSLGGL---AISKEEALELLRAALEAGINLIDTAEVYGDGPSEELLGEALKKYV 57
Query: 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPI 140
PR+++ +ATK G G G+ + ++ E SLKRL DY+DLY H D S+PI
Sbjct: 58 PRDEVFIATKVGPPGPPPDD----GSRENIKKSIEESLKRLGTDYLDLYLLHWPDPSLPI 113
Query: 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRA--HAVHPITAVQMEWSLWTRDIEEEIIP 198
EET+ +++L +EGKI++IG+S S +R A H PI VQ+E+SL R EE ++
Sbjct: 114 EETLEALEELKKEGKIRHIGVSNFSVEQLREALEHGKVPIVVVQVEYSLLRRLAEEGLLE 173
Query: 199 LCRELGIGIVPYSPLGRGFFGGK 221
LC+E GIGI+ YSPLG G GK
Sbjct: 174 LCQENGIGIIAYSPLGGGLLTGK 196
|
This family includes a number of K+ ion channel beta chain regulatory domains - these are reported to have oxidoreductase activity. Length = 277 |
| >gnl|CDD|223729 COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 1e-38
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+V L G+E+ +G G + E + ++ A G DTA++YG
Sbjct: 4 TKVTLNN-GVEIPAIGLGTWQIGDD-------EWAVRAVRAALELGYRLIDTAEIYG--- 52
Query: 69 NEVLLGKALKQL--PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NE +G+A+K+ PRE++ + TK V D EASLKRL +DY+
Sbjct: 53 NEEEVGEAIKESGVPREELFITTK-------VW--PSDLGYDETLKALEASLKRLGLDYV 103
Query: 127 DLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA--HAVHPITAVQ 182
DLY H + V IEET +++LV+EG I+ IG+S + A Q
Sbjct: 104 DLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSNFGVEHLEELLSLAKVKPAVNQ 163
Query: 183 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+E+ + R + E++P C+ GI + YSPL +G
Sbjct: 164 IEYHPYLR--QPELLPFCQRHGIAVEAYSPLAKG 195
|
Length = 280 |
| >gnl|CDD|227322 COG4989, COG4989, Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-31
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
R+ L GLE S++ G L+ +S + +S I+ A GIT FD AD+YG
Sbjct: 3 RITLAPDGLEFSRIVLGYWRLNDW---NMSARELLSFIETALELGITTFDHADIYGGYQC 59
Query: 70 EVLLGKALKQLP--REKIQVATKFGIAGIGVAGVIVKG----APDYVRSCCEASLKRLDV 123
E L G+ALK P REKI++ +K GI + G + +++ E SL L
Sbjct: 60 EALFGEALKLAPGLREKIEIVSKCGIR-LPSREEPRIGHYDTSKEHIIKSVEQSLINLKT 118
Query: 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIR--RAHAVHPITAV 181
DY+DL HR D + EE L + GK+++ G+S +P ++ +
Sbjct: 119 DYLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVSNFNPAQFELLQSRLPFTLVTN 178
Query: 182 QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
Q+E S L T + + + C++L + + +SPLG G
Sbjct: 179 QLELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGG 214
|
Length = 298 |
| >gnl|CDD|178198 PLN02587, PLN02587, L-galactose dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 7e-30
Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEV 71
+LG+ GL+VS +G+G L G PVSEED I+ ++ AF GI FFDT+ YG +E
Sbjct: 3 ELGSTGLKVSSVGFGASPL-GSVFGPVSEEDAIASVREAFRLGINFFDTSPYYGGTLSEK 61
Query: 72 LLGKALK--QLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
+LGKALK +PREK V+TK G G G + + V + SL RL +DY+D+
Sbjct: 62 VLGKALKALGIPREKYVVSTKCGRYGEG-----FDFSAERVTKSVDESLARLQLDYVDIL 116
Query: 130 YQHRVD-TSVP--IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
+ H ++ S+ + ETI ++KL E GK+++IG++ P V + S
Sbjct: 117 HCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGLPLAIFTYVLDRVPPGTVDVILS 176
Query: 187 LWTRDIE----EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPA 229
+ E+++P + G+G++ SPL G E PA
Sbjct: 177 YCHYSLNDSSLEDLLPYLKSKGVGVISASPLAMGLLTENGPPEWHPA 223
|
Length = 314 |
| >gnl|CDD|224370 COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 3e-28
Identities = 74/258 (28%), Positives = 104/258 (40%), Gaps = 36/258 (13%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEV 71
K G E+S LG+GCM L + EE+ I +A GI + DTA Y +E
Sbjct: 5 KFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEE 64
Query: 72 LLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQ 131
LGKALK REK+++ATK + VK D L++L DYID Y
Sbjct: 65 FLGKALKDGYREKVKLATK-------LPSWPVKDREDM-ERIFNEQLEKLGTDYIDYYLI 116
Query: 132 HRVDTSVPIEETIGEMK---------KLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAV 181
H ++T ET +++ K EGKI+ G S S + +P V
Sbjct: 117 HGLNT-----ETWEKIERLGVFDFLEKAKAEGKIRNAGFSFHGSTEVFKEIVDAYPWDFV 171
Query: 182 QMEWSL--WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPA------DSFL 233
Q++++ E + G+GI PL G ++ NVP
Sbjct: 172 QLQYNYIDQKNQAGTEGLKYAASKGLGIFIMEPLDGG-----GLLYNVPEKLEELCRPAS 226
Query: 234 VQRREPGQEQEYLFSHRE 251
+R YL SH E
Sbjct: 227 PKRSPAEWALRYLLSHPE 244
|
Length = 391 |
| >gnl|CDD|182140 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 1e-21
Identities = 65/235 (27%), Positives = 120/235 (51%), Gaps = 28/235 (11%)
Query: 14 GTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG--QNANEV 71
G GL + L G + + G+ + + + ++++ AF GIT FD A+ YG + E
Sbjct: 19 GKSGLRLPALSLGLWH-NFGHVNALESQR--AILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 72 LLGKALKQ---LPREKIQVATKFGIA------GIGVAGVIVKGAPDYVRSCCEASLKRLD 122
G+ L++ R+++ ++TK G G G G+ Y+ + + SLKR+
Sbjct: 76 NFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSG-------GSRKYLLASLDQSLKRMG 128
Query: 123 VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG-TIRRAHAVH----P 177
++Y+D++Y HRVD + P+EET + V+ GK Y+G+S SP T + + P
Sbjct: 129 LEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIP 188
Query: 178 ITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
+ Q ++L R +++ ++ + G+G + ++PL +G GK + +P DS
Sbjct: 189 LLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDS 242
|
Length = 346 |
| >gnl|CDD|213602 TIGR01293, Kv_beta, voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Score = 90.4 bits (224), Expect = 4e-21
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 13 LGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72
LG GL VS LG G + +S+E ++ A+ GI FDTA+VY EV+
Sbjct: 4 LGKSGLRVSCLGLGTWVT---FGGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVV 60
Query: 73 LGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
LG LK+ R + TK I G A + ++ +ASL+RL ++Y+D+ +
Sbjct: 61 LGNILKKKGWRRSSYVITTK--IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDIVF 118
Query: 131 QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH------PITAVQME 184
+R D + P+EET+ M ++ +G Y G S S I A++V P Q E
Sbjct: 119 ANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAE 178
Query: 185 WSLWTRDIEEEIIP-LCRELGIGIVPYSPLGRGFFGGK 221
+ ++ R+ E +P L ++G+G + +SPL G GK
Sbjct: 179 YHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGK 216
|
This model describes the conserved core region of the beta subunit of voltage-gated potassium (Kv) channels in animals. Amino-terminal regions differ substantially, in part by alternative splicing, and are not included in the model. Four beta subunits form a complex with four alpha subunit cytoplasmic (T1) regions, and the structure of the complex is solved. The beta subunit belongs to a family of NAD(P)H-dependent aldo-keto reductases, binds NADPH, and couples voltage-gated channel activity to the redox potential of the cell. Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. Length = 317 |
| >gnl|CDD|236727 PRK10625, tas, putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 7e-20
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 43/260 (16%)
Query: 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY- 64
H++P LEVS LG G M + SE D + + +A ++GI D A++Y
Sbjct: 4 HRIPH-----SSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYP 54
Query: 65 ------GQNANEVLLGKALKQL-PREKIQVATKF-GIAGIGVAGVIVKGAPDY--VRSCC 114
Q E +G L + REK+ +A+K G + G+ A D +R
Sbjct: 55 VPPRPETQGLTETYIGNWLAKRGSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREAL 114
Query: 115 EASLKRLDVDYIDLY----------------YQHRVDT-SVPIEETIGEMKKLVEEGKIK 157
SLKRL DY+DLY Y +V + ET+ + + GKI+
Sbjct: 115 HDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLETLDALAEQQRAGKIR 174
Query: 158 YIGLSEASP-GTIR-----RAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 211
YIG+S + G +R H + I +Q +SL R E + + + G+ ++ YS
Sbjct: 175 YIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYS 234
Query: 212 PLGRGFFGGKAVVENVPADS 231
L G GK + PA +
Sbjct: 235 CLAFGTLTGKYLNGAKPAGA 254
|
Length = 346 |
| >gnl|CDD|236676 PRK10376, PRK10376, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 2e-17
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 17 GLEVSKLGYGCMNLSG-GYSSPVSEEDG-ISMIKHAFSKGITFFDTADVYGQNANEVLLG 74
G V++LGYG M L+G G P + D I++++ A + G+ DT+D YG + L+
Sbjct: 14 GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQLIR 73
Query: 75 KALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRV 134
+AL P + V TK G + +P +R +L+ L +D +D+ R+
Sbjct: 74 EALHPYPDDLTIV-TKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVV-NLRL 131
Query: 135 --DTSVPIEETIGE-MKKLVE---EGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
D P E +I E + L E +G +++IGLS +P + A + I VQ ++L
Sbjct: 132 MGDGHGPAEGSIEEPLTVLAELQRQGLVRHIGLSNVTPTQVAEARKIAEIVCVQNHYNLA 191
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGF 217
R + I L R+ GI VP+ PLG GF
Sbjct: 192 HRADDALIDALARD-GIAYVPFFPLG-GF 218
|
Length = 290 |
| >gnl|CDD|183203 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 2e-10
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 38 VSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAG 95
S E+ I+ I A G DTA +Y NE +GKALK+ + RE++ + TK
Sbjct: 25 ASNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFITTK----- 76
Query: 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH----RVDTSVPIEETIGEMKKLV 151
+ R E SLK+L +DY+DLY H +D V E M +L
Sbjct: 77 ------LWNDDHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYV---EAWKGMIELQ 127
Query: 152 EEGKIKYIGLSEASPGTIRR 171
+EG IK IG+ ++R
Sbjct: 128 KEGLIKSIGVCNFQIHHLQR 147
|
Length = 275 |
| >gnl|CDD|183012 PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 44 ISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGV 101
I +K A G DTA +Y NE +G+A+ + +PR+++ + TK I +
Sbjct: 19 IDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWIDNL----- 70
Query: 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYI 159
A D + + SL++L DY+DL H + V +EE + + + ++G + I
Sbjct: 71 ----AKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREI 126
Query: 160 GLSEASPGTIRRAHAV---HPITAVQMEWS--LWTRDIEEEIIPLCRELGIGIVPYSPLG 214
G+S + +++A A I Q+E S L R +++ +E GI + Y L
Sbjct: 127 GISNFTIALMKQAIAAVGAENIATNQIELSPYLQNR----KVVAFAKEHGIHVTSYMTLA 182
Query: 215 RG 216
G
Sbjct: 183 YG 184
|
Length = 267 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 273 | |||
| COG0667 | 316 | Tas Predicted oxidoreductases (related to aryl-alc | 100.0 | |
| KOG1575 | 336 | consensus Voltage-gated shaker-like K+ channel, su | 100.0 | |
| TIGR01293 | 317 | Kv_beta voltage-dependent potassium channel beta s | 100.0 | |
| PRK10625 | 346 | tas putative aldo-keto reductase; Provisional | 100.0 | |
| PRK09912 | 346 | L-glyceraldehyde 3-phosphate reductase; Provisiona | 100.0 | |
| PLN02587 | 314 | L-galactose dehydrogenase | 100.0 | |
| COG0656 | 280 | ARA1 Aldo/keto reductases, related to diketogulona | 100.0 | |
| cd06660 | 285 | Aldo_ket_red Aldo-keto reductases (AKRs) are a sup | 100.0 | |
| PRK10376 | 290 | putative oxidoreductase; Provisional | 100.0 | |
| PF00248 | 283 | Aldo_ket_red: Aldo/keto reductase family; InterPro | 100.0 | |
| PRK14863 | 292 | bifunctional regulator KidO; Provisional | 100.0 | |
| PRK11172 | 267 | dkgB 2,5-diketo-D-gluconate reductase B; Provision | 100.0 | |
| KOG1576 | 342 | consensus Predicted oxidoreductase [Energy product | 100.0 | |
| KOG1577 | 300 | consensus Aldo/keto reductase family proteins [Gen | 100.0 | |
| PRK11565 | 275 | dkgA 2,5-diketo-D-gluconate reductase A; Provision | 100.0 | |
| COG4989 | 298 | Predicted oxidoreductase [General function predict | 100.0 | |
| COG1453 | 391 | Predicted oxidoreductases of the aldo/keto reducta | 100.0 | |
| KOG3023 | 285 | consensus Glutamate-cysteine ligase regulatory sub | 98.17 | |
| cd03319 | 316 | L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat | 94.95 | |
| cd03316 | 357 | MR_like Mandelate racemase (MR)-like subfamily of | 92.54 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 90.93 | |
| PRK08392 | 215 | hypothetical protein; Provisional | 89.98 | |
| cd03315 | 265 | MLE_like Muconate lactonizing enzyme (MLE) like su | 88.77 | |
| PRK10550 | 312 | tRNA-dihydrouridine synthase C; Provisional | 88.49 | |
| cd03174 | 265 | DRE_TIM_metallolyase DRE-TIM metallolyase superfam | 88.4 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 86.91 | |
| cd03323 | 395 | D-glucarate_dehydratase D-Glucarate dehydratase (G | 85.59 | |
| PRK13958 | 207 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 84.97 | |
| cd07943 | 263 | DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-te | 84.47 | |
| cd03322 | 361 | rpsA The starvation sensing protein RpsA from E.co | 84.39 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 83.54 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 83.49 | |
| PF00682 | 237 | HMGL-like: HMGL-like of this family is not conserv | 83.45 | |
| COG1140 | 513 | NarY Nitrate reductase beta subunit [Energy produc | 83.05 | |
| cd04740 | 296 | DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c | 82.58 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 82.46 | |
| PRK08609 | 570 | hypothetical protein; Provisional | 82.43 | |
| cd00740 | 252 | MeTr MeTr subgroup of pterin binding enzymes. This | 81.28 | |
| cd03318 | 365 | MLE Muconate Lactonizing Enzyme (MLE), an homoocta | 81.04 |
| >COG0667 Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-64 Score=442.57 Aligned_cols=263 Identities=41% Similarity=0.632 Sum_probs=229.6
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCC-CCCEE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKIQ 86 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~-r~~~~ 86 (273)
|++|+||++|++||+||||||.+|+.+ ...+.+++.++|++|+++||||||||+.||.|.||+++|++|++.+ |++++
T Consensus 1 m~~r~lG~~gl~vs~lglG~~~~g~~~-~~~~~~~a~~il~~A~d~Gin~~DTA~~Yg~g~sE~ilG~~l~~~~~Rd~vv 79 (316)
T COG0667 1 MKYRRLGRSGLKVSPLGLGTMTLGGDT-DDEEEAEAIEILDAALDAGINFFDTADVYGDGRSEEILGEALKERGRRDKVV 79 (316)
T ss_pred CCceecCCCCceecceeeeccccCCCC-CchhhhHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHhccCCCCeEE
Confidence 789999999999999999999998742 2235667888999999999999999999999999999999999744 89999
Q ss_pred EEeccCcCCCCCccc-cccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCC
Q 024050 87 VATKFGIAGIGVAGV-IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 87 i~tK~~~~~~~~~~~-~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~ 165 (273)
|+||++......... ..+.++++|+++++.||+||||||||+||+|+||...+.++++++|.+|+++|+||+||+||++
T Consensus 80 IaTK~g~~~~~~~~~~~~~~s~~~i~~~v~~SL~RLgtd~IDl~~iH~~d~~~p~~e~~~aL~~l~~~G~ir~iG~S~~~ 159 (316)
T COG0667 80 IATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDLYQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYS 159 (316)
T ss_pred EEEeeccCCCCCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCC
Confidence 999998776321111 3567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh--c------
Q 024050 166 PGTIRRAHAV-HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ--R------ 236 (273)
Q Consensus 166 ~~~l~~~~~~-~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~--~------ 236 (273)
++++.++++. .+++++|.+||+++|+.+.+++++|+++||++++||||++|+|++++..+ +...+... +
T Consensus 160 ~~~i~~a~~~~~~~~~~Q~~ynl~~R~~e~~l~~~~~~~gi~~~~~spla~G~Ltgk~~~~--~~~~r~~~~~~~~~~~~ 237 (316)
T COG0667 160 AEQIAEALAVAAPIDSLQPEYNLLERDAEKELLPLCREEGIGLLAYSPLASGLLTGKYLPG--PEGSRASELPRFQRELT 237 (316)
T ss_pred HHHHHHHHHhcCCceeecccCccccccchhHHHHHHHHcCCeEEEecCccccccCCCcCCC--cchhhccccccchhhhh
Confidence 9999999999 69999999999999987777999999999999999999999999996653 22221110 0
Q ss_pred ----cCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 237 ----REPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 237 ----~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.....++.++..+|.+++|+||+|++++|.|+++++|
T Consensus 238 ~~~~~~~~~l~~~a~~~g~t~aq~ALawvl~~~~v~~~I~G 278 (316)
T COG0667 238 ERGLAILRALEELAKELGATPAQVALAWVLAQPGVTSPIVG 278 (316)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceEeec
Confidence 1122357889999999999999999999999999987
|
|
| >KOG1575 consensus Voltage-gated shaker-like K+ channel, subunit beta/KCNAB [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-62 Score=423.37 Aligned_cols=268 Identities=41% Similarity=0.637 Sum_probs=234.5
Q ss_pred ccccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--C
Q 024050 3 EEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--L 80 (273)
Q Consensus 3 ~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~ 80 (273)
...+.|+++++|++|++||++|||||.+.. |+...++++++++|++|+|+|+||||||++||+|.||.++|++|++ .
T Consensus 7 ~~~~~~~~~~lg~~gl~Vs~lglG~m~~~~-~~~~~~~e~a~~~m~~a~e~Gin~fDtAe~Yg~~~~E~llg~~i~~~~~ 85 (336)
T KOG1575|consen 7 STELGMLRRKLGNSGLKVSPLGLGCMGWTT-FGGQIDKEEAFELLDHAYEAGINFFDTAEVYGNGQSEELLGEFIKSRGW 85 (336)
T ss_pred cchhcceeeeccCCCceecceeecceeeec-cccCCCHHHHHHHHHHHHHcCCCEEehhhhcCCcccHHHHHHHHHhcCC
Confidence 445569999999999999999999985443 5555799999999999999999999999999999999999999998 6
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEe
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 160 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG 160 (273)
+|++++|+||++.... +......+..++.+.++.|++||+++|||+||+||+|+..|+++++++|.+++++|||||||
T Consensus 86 ~R~~vviaTK~~~~~~--~~~~~G~~~~~i~~~~~~s~~rl~~~~IDl~q~Hr~D~~~piee~m~aL~~lve~Gki~yiG 163 (336)
T KOG1575|consen 86 RRDKVVIATKFGFDYG--GETPRGLSRKHIIEGVRDSLRRLQTDYIDLLQVHRWDPMVPIEETMRALTDLVEQGKIRYWG 163 (336)
T ss_pred cCCcEEEEEEEeccCC--CcCCCCCcHHHHHHHHHHHHHhcCCCeeEEEEEcccCCCCCHHHHHHHHHHHHhcCceEEEE
Confidence 7999999999987662 11234567889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhcCC--ceEEeeeccccccccc-ccHHHHHHHhCCeEEecccCCCccCCCCCC-CCCCCCchhhhh-
Q 024050 161 LSEASPGTIRRAHAVHP--ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAV-VENVPADSFLVQ- 235 (273)
Q Consensus 161 vS~~~~~~l~~~~~~~~--~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~-~~~~~~~~~~~~- 235 (273)
+|++++++|.+++...+ ++++|++||++.|+.+ .++++.|++.||++++||||++|+||+++. .++.+.+.....
T Consensus 164 lSe~sa~~I~~a~~~~~~p~~s~Q~eysl~~Rd~ee~~i~~~c~~~Gi~li~ysPL~~G~Ltgk~~~~e~~~~~~~~~~~ 243 (336)
T KOG1575|consen 164 LSEWSAEEIREAHAVAPIPIVAVQVEYSLLSRDKEERGIIPLCRELGIGLIAWSPLGRGLLTGKYKLGEDSRNGDKRFQF 243 (336)
T ss_pred eccCCHHHHHHHHHhcCCCceEeeeechhhhcchhhhhHHHHHHHcCcceEEecccccceeccCcccccccccccccccc
Confidence 99999999999999977 9999999999999955 669999999999999999999999999944 344444432110
Q ss_pred -----c--------cCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 -----R--------REPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 -----~--------~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+ ....++.++|.++|+|++|+||+||++++.|.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~iA~k~g~T~~qlALawv~~~~~v~~pIpG 294 (336)
T KOG1575|consen 244 LGLSPQTEEGDKQKPILEALSKIAEKHGCTVPQLALAWVLSNGKVSSPIPG 294 (336)
T ss_pred cccccccchhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCEEecCC
Confidence 1 0122357899999999999999999999999999987
|
|
| >TIGR01293 Kv_beta voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-58 Score=404.55 Aligned_cols=258 Identities=28% Similarity=0.425 Sum_probs=217.2
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQV 87 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i 87 (273)
||+||++|++||+||||||.+ +|...+.+++.++|++|+++|||+||||+.||.|.||+++|++|+. .+|++++|
T Consensus 1 ~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~g~sE~~lG~~l~~~~~~R~~~~i 77 (317)
T TIGR01293 1 YRNLGKSGLRVSCLGLGTWVT---FGGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVVLGNILKKKGWRRSSYVI 77 (317)
T ss_pred CcccCCCCCeecceeecCCcc---CCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCccHHHHHHHHHhcCCCcccEEE
Confidence 589999999999999999974 2334578999999999999999999999999999999999999985 36999999
Q ss_pred EeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHH
Q 024050 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (273)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~ 167 (273)
+||+++.... ....+.+++.+++++++||+|||+||||+|++|+|+...++++++++|++|+++||||+||+|||+++
T Consensus 78 aTK~~~~~~~--~~~~~~~~~~i~~~~~~SL~rL~td~iDl~~lH~~~~~~~~~e~~~aL~~l~~~G~ir~iGvSn~~~~ 155 (317)
T TIGR01293 78 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDIVFANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSM 155 (317)
T ss_pred EeeeccCCCC--CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEeccCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHH
Confidence 9998643210 01124579999999999999999999999999999988889999999999999999999999999998
Q ss_pred HHHHHhhc------CCceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh------
Q 024050 168 TIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV------ 234 (273)
Q Consensus 168 ~l~~~~~~------~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~------ 234 (273)
.++++... .+++++|++||+++++. +.+++++|+++||++++|+||++|+|++++... .|.+.+..
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~Q~~~~l~~r~~~e~~l~~~~~~~gi~v~a~spl~~G~Ltg~~~~~-~~~~~~~~~~~~~~ 234 (317)
T TIGR01293 156 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGKYDSG-IPPYSRATLKGYQW 234 (317)
T ss_pred HHHHHHHHHHHcCCCCcceeccccChHhcchhHHHHHHHHHHcCCeEEEeccccccccCCCCCCC-CCCcccccccccch
Confidence 88776432 46789999999999874 568999999999999999999999999986432 22221100
Q ss_pred ------------hccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 ------------QRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 ------------~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.......+.++|.++|++++|+||+|++++|.|+++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqlal~w~l~~~~v~~~i~G 285 (317)
T TIGR01293 235 LKDKILSEEGRRQQARLKDLQAIAERLGCTLPQLAIAWCLRNEGVSSVLLG 285 (317)
T ss_pred hhhhhcchhhHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhcCCCCeEEEeC
Confidence 000013467889999999999999999999999998887
|
Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. |
| >PRK10625 tas putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-57 Score=404.37 Aligned_cols=262 Identities=27% Similarity=0.359 Sum_probs=217.3
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCC-------CCcHHHHHHHHHhc-
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg-------~g~se~~lg~~l~~- 79 (273)
|+||+||+||++||+||||||++|. ..+.+++.++|++|+++|||+||||+.|| .|.||+.+|++|+.
T Consensus 1 m~~r~lg~t~~~vs~iglGt~~~g~----~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~~~~~~~~g~sE~~iG~aL~~~ 76 (346)
T PRK10625 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYIGNWLAKR 76 (346)
T ss_pred CCceecCCCCCccccEeEeccccCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCcCCCCCCchHHHHHHHHhhc
Confidence 7899999999999999999999864 34689999999999999999999999998 48899999999985
Q ss_pred CCCCCEEEEeccCcCCCCCc---cccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-----------------CCC
Q 024050 80 LPREKIQVATKFGIAGIGVA---GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-----------------SVP 139 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~---~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-----------------~~~ 139 (273)
.+|++++|+||++....... ....+.+++.+++++++||+|||+||||+|++|+|+. ..+
T Consensus 77 ~~R~~v~i~TK~~~~~~~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T PRK10625 77 GSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_pred CCcceEEEEcccccCCcCCCCCcCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEeeccCcccccccccccccccccCCCC
Confidence 46999999999853211000 0112467999999999999999999999999999964 246
Q ss_pred HHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc------CCceEEeeecccccccccccHHHHHHHhCCeEEecccC
Q 024050 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl 213 (273)
+.++|++|++|+++||||+||+|||+.+.++++... ..+.++|++||++++..+.+++++|+++||++++|+||
T Consensus 157 ~~e~~~aL~~l~~~GkIr~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~q~~y~l~~r~~~~~ll~~~~~~gi~via~spL 236 (346)
T PRK10625 157 LLETLDALAEQQRAGKIRYIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCHHHHHHHHHHHHHcCCCCcEEecCCCCcccccchhHHHHHHHHcCCeEEEeccc
Confidence 789999999999999999999999999888776532 35789999999999876678999999999999999999
Q ss_pred CCccCCCCCCCCCCCCchhh--hhcc----------CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 214 GRGFFGGKAVVENVPADSFL--VQRR----------EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 214 ~~G~L~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++|+|++++.....|.+.+. ..++ ....+.++|.+++++++|+||+|++++|.|+++++|
T Consensus 237 ~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~g~t~aqval~w~l~~~~v~~~I~G 308 (346)
T PRK10625 237 AFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIAKRHGLDPAQMALAFVRRQPFVASTLLG 308 (346)
T ss_pred cCeeccCCCCCCCCCCCcccccccccccccchhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeeEEeC
Confidence 99999998543333322110 0000 023467899999999999999999999999998887
|
|
| >PRK09912 L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-57 Score=402.54 Aligned_cols=262 Identities=26% Similarity=0.447 Sum_probs=217.8
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC--CcHHHHHHHHHhc---CC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKALKQ---LP 81 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g~se~~lg~~l~~---~~ 81 (273)
.|++|+||++|++||+||||||+. +|...+.+++.++|++|+++|||+||||+.||+ |.||+.+|++|++ .+
T Consensus 12 ~m~~r~lg~tg~~vs~lglG~~~~---~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~YG~~~g~sE~~lG~~l~~~~~~~ 88 (346)
T PRK09912 12 QMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAY 88 (346)
T ss_pred CcceeecCCCCcccccccccCccc---cCCCCCHHHHHHHHHHHHHCCCCEEEChhhhCCCCCCcHHHHHHHHHhcccCC
Confidence 589999999999999999999972 333336778899999999999999999999995 8999999999985 26
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
|++++|+||++....+ .......+++++++++++||+|||+||||+|++|+|+...++++++++|++|+++||||+|||
T Consensus 89 Rd~~~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~e~~~al~~l~~~GkIr~iGv 167 (346)
T PRK09912 89 RDELIISTKAGYDMWP-GPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGI 167 (346)
T ss_pred CCeEEEEEEecccCCC-CcCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEEEe
Confidence 9999999998753111 001123579999999999999999999999999999988889999999999999999999999
Q ss_pred CCCCHHHHHHHhhc-----CCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhh--
Q 024050 162 SEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFL-- 233 (273)
Q Consensus 162 S~~~~~~l~~~~~~-----~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~-- 233 (273)
|||++++++++.+. .++.++|++||++++..+ .+++++|+++||+|++|+||++|+|++++... .|.+.+.
T Consensus 168 Sn~~~~~~~~~~~~~~~~~~~~~~~Q~~ynll~~~~~~~~ll~~~~~~gI~via~spl~~G~Lt~~~~~~-~~~~~~~~~ 246 (346)
T PRK09912 168 SSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-IPQDSRMHR 246 (346)
T ss_pred cCCCHHHHHHHHHHHHhcCCCcEEeeccCCceecccchhhHHHHHHHcCceEEEehhhcCccccCCCCCC-CCCCccccc
Confidence 99999988765542 367899999999998754 57999999999999999999999999985332 1211100
Q ss_pred --------hhcc-------CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 234 --------VQRR-------EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 234 --------~~~~-------~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.... ....+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~g~t~aq~AL~w~l~~~~v~~~i~G 301 (346)
T PRK09912 247 EGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDERVTSVLIG 301 (346)
T ss_pred cccchhhhchhhccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 0000 013467889999999999999999999999999887
|
|
| >PLN02587 L-galactose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-56 Score=391.96 Aligned_cols=255 Identities=30% Similarity=0.488 Sum_probs=212.6
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQV 87 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i 87 (273)
||+||+||++||.||||||++|..|+. ++.+++.++|++|++.|||+||||+.||.|.+|+.+|++|++ .+|++++|
T Consensus 1 ~r~lg~t~~~vs~lglG~~~~g~~~~~-~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~al~~~~~~R~~v~I 79 (314)
T PLN02587 1 LRELGSTGLKVSSVGFGASPLGSVFGP-VSEEDAIASVREAFRLGINFFDTSPYYGGTLSEKVLGKALKALGIPREKYVV 79 (314)
T ss_pred CCcCCCCCCcccCcccccccccCCCCC-CCHHHHHHHHHHHHHcCCCEEECcCccCCCchHHHHHHHHHhCCCCcceEEE
Confidence 689999999999999999999865553 588999999999999999999999999999999999999986 47999999
Q ss_pred EeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC---CCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~---~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||++.... ..+.+++.+++++++||+|||+||||+|++|+|+.. .+++++|++|++|+++||||+||+|||
T Consensus 80 ~TK~~~~~~-----~~~~~~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~ 154 (314)
T PLN02587 80 STKCGRYGE-----GFDFSAERVTKSVDESLARLQLDYVDILHCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGL 154 (314)
T ss_pred EeccccCCC-----CCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCcchhhhHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 999874321 124679999999999999999999999999999642 346789999999999999999999999
Q ss_pred CHHHHHHHhhc-----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 165 SPGTIRRAHAV-----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 165 ~~~~l~~~~~~-----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
++++++.+... ..+..+|++||+.++.. .+++++|+++||++++|+||++|+|+++......+..... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ll~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~--~~~~ 231 (314)
T PLN02587 155 PLAIFTYVLDRVPPGTVDVILSYCHYSLNDSSL-EDLLPYLKSKGVGVISASPLAMGLLTENGPPEWHPAPPEL--KSAC 231 (314)
T ss_pred CHHHHHHHHHhhhcCCCCeEEeccccCcchhhH-HHHHHHHHHcCceEEEechhhccccCCCCCCCCCCCCHHH--HHHH
Confidence 99888776643 23445678999988754 5899999999999999999999999987322111111111 1112
Q ss_pred hhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..+.++|.++++|++|+||+|++++|.|+++++|
T Consensus 232 ~~l~~~a~~~~~s~aq~al~~~l~~~~v~~~i~G 265 (314)
T PLN02587 232 AAAATHCKEKGKNISKLALQYSLSNKDISTTLVG 265 (314)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCeeEEec
Confidence 2356789999999999999999999999999887
|
|
| >COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-55 Score=370.98 Aligned_cols=221 Identities=30% Similarity=0.470 Sum_probs=194.9
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~ 85 (273)
+.+.+| ++|.+||.||||||++++ .+...+++.+|++.|+|+||||..|| ||+.+|+++++ .+|+++
T Consensus 3 ~~~~~l-~~g~~iP~iGlGt~~~~~-------~~~~~~av~~Al~~Gyr~IDTA~~Yg---nE~~VG~aI~~s~v~Reel 71 (280)
T COG0656 3 KTKVTL-NNGVEIPAIGLGTWQIGD-------DEWAVRAVRAALELGYRLIDTAEIYG---NEEEVGEAIKESGVPREEL 71 (280)
T ss_pred Cceeec-CCCCcccCcceEeeecCC-------chhHHHHHHHHHHhCcceEecHhHhc---CHHHHHHHHHhcCCCHHHe
Confidence 455777 567789999999999764 33399999999999999999999999 99999999998 789999
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC--CCHHHHHHHHHHHHHcCCccEEecCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSE 163 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGvS~ 163 (273)
||+||++... .+.+.+.+++++||+|||+||+|||+||||.+. ..+.++|++|++++++|+||+|||||
T Consensus 72 FittKvw~~~---------~~~~~~~~a~e~Sl~rLg~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVSN 142 (280)
T COG0656 72 FITTKVWPSD---------LGYDETLKALEASLKRLGLDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSN 142 (280)
T ss_pred EEEeecCCcc---------CCcchHHHHHHHHHHHhCCCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEeeC
Confidence 9999998766 457889999999999999999999999999752 33789999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCcc-CCCCCCCCCCCCchhhhhccCch
Q 024050 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF-FGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~-L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
|++++|+++++. ..|+++|++||++.++. +++++|+++||.++|||||++|. |.. .+
T Consensus 143 F~~~~L~~l~~~~~~~p~~NQIe~hp~~~q~--el~~~~~~~gI~v~AysPL~~g~~l~~------------------~~ 202 (280)
T COG0656 143 FGVEHLEELLSLAKVKPAVNQIEYHPYLRQP--ELLPFCQRHGIAVEAYSPLAKGGKLLD------------------NP 202 (280)
T ss_pred CCHHHHHHHHHhcCCCCceEEEEeccCCCcH--HHHHHHHHcCCEEEEECCccccccccc------------------Ch
Confidence 999999999877 45899999999999985 49999999999999999999643 221 12
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcc
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMG 268 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~ 268 (273)
.+..++.+||+|++|++|+|+++++.+.
T Consensus 203 ~l~~Ia~k~g~t~AQv~L~W~i~~gv~~ 230 (280)
T COG0656 203 VLAEIAKKYGKTPAQVALRWHIQRGVIV 230 (280)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCcEE
Confidence 4678999999999999999999988443
|
|
| >cd06660 Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-54 Score=375.91 Aligned_cols=252 Identities=41% Similarity=0.631 Sum_probs=221.9
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCC-CCCEEEE
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKIQVA 88 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~-r~~~~i~ 88 (273)
+|+||++|++||+||||||.++..+ .+.+++.+++++|++.|||+||||+.||.|.+|+.+|++|+..+ |++++|+
T Consensus 1 ~r~lg~tg~~vs~lg~G~~~~~~~~---~~~~~~~~~l~~A~~~Gi~~iDTA~~Yg~g~sE~~lG~al~~~~~R~~~~i~ 77 (285)
T cd06660 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGESEELLGEALKERGPREEVFIA 77 (285)
T ss_pred CcccCCCCceecCcceeccccCCCC---CCHHHHHHHHHHHHHcCCCeEECccccCCCCCHHHHHHHHhccCCcCcEEEE
Confidence 5899999999999999999987644 47899999999999999999999999999999999999999754 9999999
Q ss_pred eccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCC-HHHHHHHHHHHHHcCCccEEecCCCCHH
Q 024050 89 TKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPG 167 (273)
Q Consensus 89 tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~-~~~~~~~L~~l~~~G~ir~iGvS~~~~~ 167 (273)
||++..... ..+.+++.+++++++||++|++||||+|+||+|+.... ..++|++|++++++|+||+|||||++++
T Consensus 78 tK~~~~~~~----~~~~~~~~~~~~l~~sL~~L~~~~iDl~~lh~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 153 (285)
T cd06660 78 TKVGPRPGD----GRDLSPEHIRRAVEESLKRLGTDYIDLYLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAE 153 (285)
T ss_pred eeecCCCCC----CCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCCHHHHHHHHHHHHHcCCccEEEeeCCCHH
Confidence 999865421 13467999999999999999999999999999988766 8999999999999999999999999999
Q ss_pred HHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHHHH
Q 024050 168 TIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEY 245 (273)
Q Consensus 168 ~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
.+.+++.. .+++++|++||++++..+.+++++|+++||+|++|+||++|.|+++......+.... ....+..+
T Consensus 154 ~l~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~~l~~g~l~~~~~~~~~~~~~~-----~~~~~~~~ 228 (285)
T cd06660 154 QLEEALAAAGVPPAVNQVEYNLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGD-----LLEALKEI 228 (285)
T ss_pred HHHHHHHhhCCCceEEecccCcccCchHHHHHHHHHHcCcEEEEeccccCceecCCCCCCCCCChhh-----HHHHHHHH
Confidence 99999888 899999999999999865579999999999999999999999987643322211111 12346788
Q ss_pred HHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 246 LFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 246 ~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+..++.+++|+||+|++++|.+.++++|
T Consensus 229 ~~~~~~s~~q~al~~~l~~p~~~~~i~g 256 (285)
T cd06660 229 AEKHGVTPAQVALRWLLQQPGVTSVIPG 256 (285)
T ss_pred HHHhCCCHHHHHHHHHhcCCCCeEEEeC
Confidence 9999999999999999999999999886
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. |
| >PRK10376 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-52 Score=361.83 Aligned_cols=247 Identities=25% Similarity=0.380 Sum_probs=206.8
Q ss_pred ccCCCcccCCCCCcccCcceeccccCCC--CCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCC
Q 024050 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSG--GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPR 82 (273)
Q Consensus 5 ~~~m~~r~lg~sg~~vs~lglG~~~~~~--~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r 82 (273)
.|+-.+.+|+ |++||+||||||++|+ .||...+++++.++|++|++.|||+||||+.||.|.+|+.+|++++ ..|
T Consensus 4 ~~~~~~~~l~--g~~vs~iglG~~~lg~~~~~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~~~sE~~lg~~l~-~~R 80 (290)
T PRK10376 4 IMSSGTFTLG--GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQLIREALH-PYP 80 (290)
T ss_pred cccCCceecC--CeeecccceeccccCCCCcCCCCCCHHHHHHHHHHHHHcCCCeEEChhhcCCCcHHHHHHHHHh-cCC
Confidence 3444456674 9999999999999975 3565557899999999999999999999999999999999999997 469
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-----CCCHHHHHHHHHHHHHcCCcc
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-----SVPIEETIGEMKKLVEEGKIK 157 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-----~~~~~~~~~~L~~l~~~G~ir 157 (273)
++++|+||++........+....+++.+++++++||+||++||||+|++|+++. ..+..++|++|++|+++||||
T Consensus 81 ~~~~i~TK~g~~~~~~~~~~~~~~~~~i~~~~e~SL~rL~td~iDl~~~H~~~~~h~p~~~~~~~~~~~l~~l~~~Gkir 160 (290)
T PRK10376 81 DDLTIVTKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVVNLRLMGDGHGPAEGSIEEPLTVLAELQRQGLVR 160 (290)
T ss_pred CeEEEEeeecccCCCCCccCCCCCHHHHHHHHHHHHHHhCCCeEEEEEEeccCCCCCCCCCCHHHHHHHHHHHHHCCcee
Confidence 999999998754311111223567999999999999999999999999887521 234789999999999999999
Q ss_pred EEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhcc
Q 024050 158 YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRR 237 (273)
Q Consensus 158 ~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~ 237 (273)
+||||||+++.++++.+..+++++|++||++++.. .+++++|+++||++++|+||+++. + .
T Consensus 161 ~iGvSn~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~~~~~~~~gi~v~a~~pL~g~~----------~--------~ 221 (290)
T PRK10376 161 HIGLSNVTPTQVAEARKIAEIVCVQNHYNLAHRAD-DALIDALARDGIAYVPFFPLGGFT----------P--------L 221 (290)
T ss_pred EEEecCCCHHHHHHHHhhCCeEEEecccCCCcCCh-HHHHHHHHHcCCEEEEeecCCCCC----------h--------h
Confidence 99999999999999988889999999999999764 679999999999999999997331 0 0
Q ss_pred CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 238 EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 238 ~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..+.+.++|.+++.+++|+||+|++++|.+.++++|
T Consensus 222 ~~~~l~~ia~~~~~t~aq~al~w~l~~~~~~~~i~G 257 (290)
T PRK10376 222 QSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPG 257 (290)
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHhCCCCeeEeeC
Confidence 123467899999999999999999998766677776
|
|
| >PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-52 Score=364.17 Aligned_cols=245 Identities=35% Similarity=0.554 Sum_probs=206.5
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCCCCc
Q 024050 22 KLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVA 99 (273)
Q Consensus 22 ~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~~~~ 99 (273)
+||||||++++. ..+.+++.++|+.|++.|||+||||+.||.|.+|+.+|++|++ .+|++++|+||+... .
T Consensus 1 ~l~lG~~~~~~~---~~~~~~~~~~l~~a~~~Gin~~DtA~~Y~~g~sE~~lg~~l~~~~~~r~~~~i~tK~~~~----~ 73 (283)
T PF00248_consen 1 PLGLGTWRLGGE---RVSEEEAEAILRRALEAGINFFDTADSYGNGRSERILGRALRKSRVPRDDIFISTKVYGD----G 73 (283)
T ss_dssp SBEEECTTBTTT---TSTHHHHHHHHHHHHHTT--EEEECGGGGGGTHHHHHHHHHHHTSSTGGGSEEEEEEESS----S
T ss_pred CEEEEccccCCC---CCCHHHHHHHHHHHHHcCCCeecccccccccccccccccccccccccccccccccccccc----c
Confidence 589999998753 5689999999999999999999999999999999999999997 789999999999222 2
Q ss_pred cccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCC-HHHHHHHHHHHHHcCCccEEecCCCCHHHHHHH--hhcC
Q 024050 100 GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA--HAVH 176 (273)
Q Consensus 100 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~-~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~--~~~~ 176 (273)
.+....+++.+++++++||++||+||||+|++|+|+.... ..++|++|++|+++|+||+||||||+++.++++ ....
T Consensus 74 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 153 (283)
T PF00248_consen 74 KPEPDYSPDSIRESLERSLERLGTDYIDLLLLHWPDPSEDALEEVWEALEELKKEGKIRHIGVSNFSPEQLEAALKIGSI 153 (283)
T ss_dssp STGGGSSHHHHHHHHHHHHHHHTSSSEEEEEESSSSTTSSHHHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHTCTSS
T ss_pred cccccccccccccccccccccccccchhccccccccccccccchhhhhhhhccccccccccccccccccccccccccccc
Confidence 3355678999999999999999999999999999999988 999999999999999999999999999999999 5558
Q ss_pred CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh--hccCchhHHHHHHhcCCChH
Q 024050 177 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV--QRREPGQEQEYLFSHREPCQ 254 (273)
Q Consensus 177 ~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 254 (273)
+|+++|++||++++....+++++|+++||++++|+||++|+|++++.....+...... .......+.+++.+++++++
T Consensus 154 ~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~~~l~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~g~s~~ 233 (283)
T PF00248_consen 154 PPDVVQINYNLLNRREEEGLLEFCREHGIGVIAYSPLAGGLLTGKYKSPPPPPSRASLRDAQELADALRELAEEHGVSPA 233 (283)
T ss_dssp -ESEEEEE-BTTBHBGGHHHHHHHHHTT-EEEEESTTGGGCGGTTTTTTTTSTTTSGSSTHGGGHHHHHHHHHHHTSSHH
T ss_pred cccccccccccccccccccccccccccccccccccccccCccccccccCCCcccccccchhhhhhhhhhhhhhhcccccc
Confidence 8999999999997666689999999999999999999999999885443322211110 11223456789999999999
Q ss_pred HHHHHhhhcCCCcccccCC
Q 024050 255 KVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 255 q~aL~~~l~~p~v~s~~~g 273 (273)
|+||+|++++|.++++++|
T Consensus 234 q~al~~~l~~~~~~~~i~g 252 (283)
T PF00248_consen 234 QLALRWVLSHPGVASVIVG 252 (283)
T ss_dssp HHHHHHHHTSHTTEEEEEB
T ss_pred hhhhhhhhhccccccccCC
Confidence 9999999999999999887
|
All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A .... |
| >PRK14863 bifunctional regulator KidO; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-52 Score=361.88 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=199.9
Q ss_pred CcccCcceeccccCCCC-------CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEe
Q 024050 17 GLEVSKLGYGCMNLSGG-------YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVAT 89 (273)
Q Consensus 17 g~~vs~lglG~~~~~~~-------~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~t 89 (273)
+++||+||||||++|.. |+ .++++++.++|+.|++.||||||||+.|| .||+.+|++|+...+++++|+|
T Consensus 2 ~~~vs~iglGt~~~g~~~~~~~~~~~-~~~~~ea~~~l~~A~~~Gin~~DTA~~YG--~SE~~lG~al~~~~~~~~~i~t 78 (292)
T PRK14863 2 SSPVSKLGLAAAQFGLDPGSSSAPRG-RTPEAEARDILNIAARAGLSVLDASGLFG--RAETVLGQLIPRPVPFRVTLST 78 (292)
T ss_pred CCcceeeeeeeeccCCCcccccCCCC-CCCHHHHHHHHHHHHHcCCCEEecchhhh--hHHHHHhhhhccCCceEeeccc
Confidence 57899999999999863 33 46899999999999999999999999997 7999999999843346788999
Q ss_pred ccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCH-HHHHHHHHHHHHcCCccEEecCCCCHH
Q 024050 90 KFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPI-EETIGEMKKLVEEGKIKYIGLSEASPG 167 (273)
Q Consensus 90 K~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~-~~~~~~L~~l~~~G~ir~iGvS~~~~~ 167 (273)
|.. +.+++.+++++++||+|||+||||+|++|+|+.. .+. +++|++|++|+++||||+|||||++++
T Consensus 79 k~~-----------~~~~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~ 147 (292)
T PRK14863 79 VRA-----------DRGPDFVEAEARASLRRMGVERADAILVHSPTELFGPHGAALWERLQALKDQGLFAKIGVSAHASD 147 (292)
T ss_pred ccc-----------cccHHHHHHHHHHHHHHhCCCccCeEEEeCchhhcCcchHHHHHHHHHHHHcCCcceEeeeccCHH
Confidence 842 1348899999999999999999999999999763 333 578999999999999999999999999
Q ss_pred HHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHHHHH
Q 024050 168 TIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246 (273)
Q Consensus 168 ~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (273)
++..+....+++++|++||+++++.+ .+++++|+++||++++|+||++|+|+++.. ..+.. ..........+.+++
T Consensus 148 ~~~~~~~~~~~~~~Q~~~n~l~~~~~~~~~l~~~~~~gi~v~a~spl~~G~L~~~~~--~~~~~-~~~~~~~~~~~~~~~ 224 (292)
T PRK14863 148 DPVGVARRFKPDILQAPASLLDQRLLADGSLQRIAGMGVEVHLRSIFLNGLLFLPPD--RVPAQ-LKGASGRLSRVRRMI 224 (292)
T ss_pred HHHHHHhcCCCCEEEecCCcccccccccchHHHHHhCCCEEEEechhhCccccCCcc--cCccc-hhhhhHHHHHHHHHH
Confidence 98888777899999999999998754 579999999999999999999999986421 11111 000001122345677
Q ss_pred HhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 247 FSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 247 ~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..++.+++|+||+|++++|.|+++++|
T Consensus 225 ~~~~~s~aqlalaw~l~~p~v~~~I~G 251 (292)
T PRK14863 225 AEGRSDPLQAALGFALSRPEGSAVLVG 251 (292)
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEe
Confidence 788999999999999999999999887
|
|
| >PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-50 Score=344.80 Aligned_cols=214 Identities=24% Similarity=0.369 Sum_probs=187.8
Q ss_pred cccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCC
Q 024050 18 LEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAG 95 (273)
Q Consensus 18 ~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~ 95 (273)
++||+||||||+++ .+++.+++++|++.|||+||||+.|| +|+.+|++|+. .+|+++||+||++..
T Consensus 1 ~~vs~lglGt~~~~--------~~~~~~~i~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~- 68 (267)
T PRK11172 1 MSIPAFGLGTFRLK--------DQVVIDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWID- 68 (267)
T ss_pred CCCCCEeeEccccC--------hHHHHHHHHHHHHcCCCEEEccchhC---CHHHHHHHHHHcCCChhHeEEEEEeCCC-
Confidence 36999999999753 47799999999999999999999998 79999999985 479999999998532
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC--CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHh
Q 024050 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAH 173 (273)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~ 173 (273)
..+++.+++++++||+|||+||||+|++|+|++. .+..++|++|++|+++||||+||||||+++++++++
T Consensus 69 --------~~~~~~~~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~ 140 (267)
T PRK11172 69 --------NLAKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIALMKQAI 140 (267)
T ss_pred --------CCCHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEccCCHHHHHHHH
Confidence 2468999999999999999999999999999764 567899999999999999999999999999999887
Q ss_pred hc---CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHHHHHHhcC
Q 024050 174 AV---HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYLFSHR 250 (273)
Q Consensus 174 ~~---~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (273)
+. .+++++|++||++++. .+++++|+++||+|++|+||++|.+.. ...+.++|.+++
T Consensus 141 ~~~~~~~~~~~Q~~~~~~~~~--~~ll~~~~~~gi~v~a~spl~~G~~~~------------------~~~l~~~a~~~~ 200 (267)
T PRK11172 141 AAVGAENIATNQIELSPYLQN--RKVVAFAKEHGIHVTSYMTLAYGKVLK------------------DPVIARIAAKHN 200 (267)
T ss_pred HhcCCCCCeEEeeecCCCCCc--HHHHHHHHHCCCEEEEECCCCCCcccC------------------CHHHHHHHHHhC
Confidence 64 3689999999999885 679999999999999999999986542 123678999999
Q ss_pred CChHHHHHHhhhcCCCcccccCC
Q 024050 251 EPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 251 ~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|++|+||+|++++|.+ +++|
T Consensus 201 ~s~aqval~w~l~~~~~--~i~g 221 (267)
T PRK11172 201 ATPAQVILAWAMQLGYS--VIPS 221 (267)
T ss_pred CCHHHHHHHHHHhCCCE--eecC
Confidence 99999999999999843 5554
|
|
| >KOG1576 consensus Predicted oxidoreductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-50 Score=329.70 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=230.1
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEE
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQ 86 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~ 86 (273)
.|.||.+|++|++||+|+||++.++..|+. .++++....+..|++.|||+|||++.||++++|+.+|.++++.||+.+|
T Consensus 21 rmeyR~lg~tgl~VSk~~fGga~L~~~fgd-~~~e~~i~tv~eA~k~GINyiDTsp~Ygqs~se~~lg~al~~vPR~aYy 99 (342)
T KOG1576|consen 21 RMEYRQLGSTGLRVSKLGFGGAALGQLFGD-EDEEEGILTVIEAFKSGINYIDTSPYYGQSRSEEGLGLALKDVPREAYY 99 (342)
T ss_pred HHHHhhcCCCcceeeeeeecchhhhhhcCC-cchhhhHHHHHHHHHccccceecCcccCcchhHHHHHHHHhhCChhhee
Confidence 489999999999999999999999998887 4788888877789999999999999999999999999999999999999
Q ss_pred EEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC----CCHHHHHHHHHHHHHcCCccEEecC
Q 024050 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS----VPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~----~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
|+||++....+ .....+++++.+++++++|||||++||+|++++|+.+.. ..+.|++.+|+++|++||||+||++
T Consensus 100 IaTKvgRy~ld-~~~~FdfsadkvreSv~rSlerLqldyvDilqiHDvefap~ld~vl~Etlp~Le~lk~~Gk~RfiGit 178 (342)
T KOG1576|consen 100 IATKVGRYELD-YANMFDFSADKVRESVKRSLERLQLDYVDILQIHDVEFAPNLDIVLNETLPALEELKQEGKIRFIGIT 178 (342)
T ss_pred eeeeeeecccC-ccccccchHHHHHHHHHHHHHHhCCceeEEEEeecccccccccHHHHHHHHHHHHHHhcCceeEeeec
Confidence 99999876532 234578999999999999999999999999999998754 3367999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEe--eecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccC
Q 024050 163 EASPGTIRRAHAVH--PITAVQ--MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRRE 238 (273)
Q Consensus 163 ~~~~~~l~~~~~~~--~~~~~q--~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~ 238 (273)
.++.+.+.++.+.. .++++- ..|++.+... -..+++.+.+|++|+.-++++.|+|+...++++.|.++..+.-
T Consensus 179 gypldvl~~~ae~~~G~~dvvlsY~ry~l~d~tL-l~~~~~~~sk~vgVi~AsalsmgLLt~~gp~~wHPaS~Elk~~-- 255 (342)
T KOG1576|consen 179 GYPLDVLTECAERGKGRLDVVLSYCRYTLNDNTL-LRYLKRLKSKGVGVINASALSMGLLTNQGPPPWHPASDELKEA-- 255 (342)
T ss_pred ccchHHHHHHHhcCCCceeeehhhhhhccccHHH-HHHHHHHHhcCceEEehhhHHHHHhhcCCCCCCCCCCHHHHHH--
Confidence 99999999988763 455554 5666666543 6678888999999999999999999999888899987765443
Q ss_pred chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 239 PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 239 ~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..+..++|.+.++.++.+|+.|+++.|.++++.+|
T Consensus 256 a~~aa~~Cq~rnv~l~kLA~~Yam~~~~~~~~lvG 290 (342)
T KOG1576|consen 256 AKAAAEYCQSRNVELGKLAMYYAMSLPGVSTVLVG 290 (342)
T ss_pred HHHHHHHHHHcCccHHHHHHHHHHccCCcceEEec
Confidence 33456899999999999999999999999999887
|
|
| >KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-50 Score=340.09 Aligned_cols=222 Identities=29% Similarity=0.409 Sum_probs=196.9
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCCC
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r~ 83 (273)
..+| ++|.++|.||||||+. +..++.++++.|++.|+|+||||..|+ ||+.+|++|++ .+|+
T Consensus 6 ~~~L-n~G~~mP~iGlGTw~~--------~~~~~~~aV~~Al~~GYRHIDtA~~Y~---NE~evG~aik~~i~~~~v~Re 73 (300)
T KOG1577|consen 6 TVKL-NNGFKMPIIGLGTWQS--------PPGQVAEAVKAAIKAGYRHIDTAHVYG---NEKEVGEAIKELLAEGGVKRE 73 (300)
T ss_pred eEec-cCCCccceeeeEeccc--------ChhhHHHHHHHHHHhCcceeechhhhC---ChHHHHHHHHHHhhhCCcchh
Confidence 5788 8999999999999972 678999999999999999999999998 99999999995 6899
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC----------------CCHHHHHHHH
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS----------------VPIEETIGEM 147 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~----------------~~~~~~~~~L 147 (273)
++||+||+++.. ..++.++.++++||++||+||+|||++|||-.. .+..++|++|
T Consensus 74 diFiTSKlw~~~---------~~~~~v~~al~~sLk~L~ldYvDLyLiH~P~~~k~~~~~~~~~~~~~~~~~~~~tW~am 144 (300)
T KOG1577|consen 74 DIFITSKLWPTD---------HAPELVEKALEKSLKKLQLDYVDLYLIHWPVAFKDSFPKDENGKVNYDDVDRIETWKAM 144 (300)
T ss_pred hheeeeccCccc---------cChhhHHHHHHHHHHHhChhhhheeeEecccccCCCCCcccccccccccchHHHHHHHH
Confidence 999999999764 458899999999999999999999999999653 3467899999
Q ss_pred HHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCC
Q 024050 148 KKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE 225 (273)
Q Consensus 148 ~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~ 225 (273)
+++++.|++|+||||||+..+|+++++. .+|.++|+++|++-++ .+++++|+++||.|.|||||+.+-- +
T Consensus 145 E~~~~~Gl~rsIGVSNF~~~~le~ll~~~ki~P~vnQvE~HP~~~Q--~~L~~fCk~~~I~v~AYSpLg~~~~-~----- 216 (300)
T KOG1577|consen 145 EKLVDEGLVRSIGVSNFNIKQLEELLNLAKIKPAVNQVECHPYLQQ--KKLVEFCKSKGIVVTAYSPLGSPGR-G----- 216 (300)
T ss_pred HHHHHcCCceEeeeecCCHHHHHHHHhcCCCCCccceeeccCCcCh--HHHHHHHhhCCcEEEEecCCCCCCC-c-----
Confidence 9999999999999999999999999987 6899999999998886 6799999999999999999996642 0
Q ss_pred CCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcc
Q 024050 226 NVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMG 268 (273)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~ 268 (273)
. .-...+.+.++|++|++|++|++|+|++++..+.
T Consensus 217 ~--------~ll~~~~l~~iA~K~~kt~aQIlLrw~~q~g~~v 251 (300)
T KOG1577|consen 217 S--------DLLEDPVLKEIAKKYNKTPAQILLRWALQRGVSV 251 (300)
T ss_pred c--------ccccCHHHHHHHHHhCCCHHHHHHHHHHhCCcEE
Confidence 0 1122455789999999999999999999986543
|
|
| >PRK11565 dkgA 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-48 Score=335.13 Aligned_cols=220 Identities=26% Similarity=0.315 Sum_probs=190.9
Q ss_pred ccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEE
Q 024050 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVA 88 (273)
Q Consensus 11 r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~ 88 (273)
.+| ++|++||.||||||++ +.+++.++|++|++.|+|+||||+.|| +|+.+|++|+. .+|++++|+
T Consensus 7 ~~l-~~g~~v~~lglG~~~~--------~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~ 74 (275)
T PRK11565 7 IKL-QDGNVMPQLGLGVWQA--------SNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFIT 74 (275)
T ss_pred EEc-CCCCccCCcceECccC--------CHHHHHHHHHHHHHhCCCEEEchhhhC---CHHHHHHHHHHcCCCHHHEEEE
Confidence 557 8899999999999974 468899999999999999999999998 79999999986 469999999
Q ss_pred eccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCC-CHHHHHHHHHHHHHcCCccEEecCCCCHH
Q 024050 89 TKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (273)
Q Consensus 89 tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~-~~~~~~~~L~~l~~~G~ir~iGvS~~~~~ 167 (273)
||++.. +++.+++++++||+||++||||+|++|+|+... +..++|++|++|+++|+||+||||||+++
T Consensus 75 tK~~~~-----------~~~~~~~~~~~sL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 143 (275)
T PRK11565 75 TKLWND-----------DHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIH 143 (275)
T ss_pred EEecCc-----------chHHHHHHHHHHHHHhCCCceEEEEecCCCCCcCcHHHHHHHHHHHHHcCCeeEEeeccCCHH
Confidence 998532 367899999999999999999999999998753 47899999999999999999999999999
Q ss_pred HHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHHHH
Q 024050 168 TIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEY 245 (273)
Q Consensus 168 ~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
++++++.. ..+.++|++||++.+. .+++++|+++||.+++|+||++|.. + ....+.+.++
T Consensus 144 ~l~~~~~~~~v~~~~~Q~~~~~~~~~--~~~~~~~~~~~i~~~a~spl~~G~~-~---------------~~~~~~l~~i 205 (275)
T PRK11565 144 HLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGK-G---------------VFDQKVIRDL 205 (275)
T ss_pred HHHHHHHhCCCCceeeeeecCCccch--HHHHHHHHHCCCEEEEEccCCCCCc-c---------------cccCHHHHHH
Confidence 99988754 3578999999999875 5799999999999999999997631 0 0112457789
Q ss_pred HHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 246 LFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 246 ~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
|.++|+|++|+||+|++++|.+ +++|
T Consensus 206 a~~~g~s~aq~aL~w~l~~~~~--~I~g 231 (275)
T PRK11565 206 ADKYGKTPAQIVIRWHLDSGLV--VIPK 231 (275)
T ss_pred HHHhCCCHHHHHHHHHHcCCCE--eeCC
Confidence 9999999999999999999865 4554
|
|
| >COG4989 Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-48 Score=318.20 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=218.9
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~ 85 (273)
|++.+|++.++++|++.+|+|++.. |+ ++..+....++.|+|.|||+||-|+.||.+..|+++|.+|+- ..|+++
T Consensus 1 m~rI~l~~~~~e~Sriv~G~wRl~d-~~--~~~~e~~~~Ie~~le~Gitt~DhADIYGgy~cE~~fg~aL~l~p~lReki 77 (298)
T COG4989 1 MQRITLAPDGLEFSRIVLGYWRLND-WN--MSARELLSFIETALELGITTFDHADIYGGYQCEALFGEALKLAPGLREKI 77 (298)
T ss_pred CceEEecCCCccHHHHHHHHHhhhh-cc--CCHHHHHHHHHHHHHcCcccchhhhhcCCccHHHHHHHHHhcChhhhhhe
Confidence 6789999999999999999999875 43 467899999999999999999999999999999999999986 569999
Q ss_pred EEEeccCcCCCCC---ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 86 QVATKFGIAGIGV---AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 86 ~i~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
.|.||++...+.. ...+.+.+.++|.+++++||++|+|||+|+++||+||+..+.+|+.+|+..|+++||||++|||
T Consensus 78 eivsKCGI~~~s~~~~~~~hydts~~HI~~SVe~SL~~L~tDylD~LLiHRPDpLmd~eeVAeAf~~L~~sGKVr~fGVS 157 (298)
T COG4989 78 EIVSKCGIRLPSREEPRIGHYDTSKEHIIKSVEQSLINLKTDYLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVS 157 (298)
T ss_pred EeeeccccccccccccccccccCcHHHHHHHHHHHHHHhccchhhhhhccCCcccCCHHHHHHHHHHHHhcCCeeeeecC
Confidence 9999999776432 1235678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
||++.+++-+-.. .+++++|++.|++.... ..+.+++|+++.|.++|||||++|-++.. .+. .....
T Consensus 158 Nf~p~Q~~LL~s~l~~~LvtNQlelS~~~~~~~~DGtLd~~q~~~v~pmaWSpl~gG~~F~g--~~~--------~q~l~ 227 (298)
T COG4989 158 NFNPAQFELLQSRLPFTLVTNQLELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGGGLFLG--DDK--------FQRLR 227 (298)
T ss_pred CCCHHHHHHHHHhccchhhhcceeeccccccccccchHHHHHHcCCCcccccccCCCccccC--Ccc--------hHHHH
Confidence 9999998877665 46899999999998763 37899999999999999999999855532 111 11223
Q ss_pred hhHHHHHHhcC-CChHHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHR-EPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~-~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..++.++.+.| .+.++++++|++.+|.=--+++|
T Consensus 228 ~~l~~ia~e~ga~s~~~VaiAWllR~Pa~~~PiiG 262 (298)
T COG4989 228 KVLDRIAEEYGAVSITAVAIAWLLRHPAKPQPIIG 262 (298)
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHhCcCcccceec
Confidence 45789999999 79999999999999975555544
|
|
| >COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=328.80 Aligned_cols=241 Identities=27% Similarity=0.376 Sum_probs=212.8
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQV 87 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i 87 (273)
|.||++|++|.++|.+|||||++...+...++.+.+.++|++|+++|||+||||..|+.|.||..+|++|++.+|++|++
T Consensus 1 Mlyr~~~k~g~~~s~lgfG~MRlp~~~~~~id~~~~~~~i~~aie~GiNyidTA~~Yh~g~sE~~lgkaL~~~~Rekv~L 80 (391)
T COG1453 1 MLYRKFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEEFLGKALKDGYREKVKL 80 (391)
T ss_pred CchhhcCCCCcccceeccceeecccccCCCccHHHHHHHHHHHHHcCCceEeecccccCCCchHHHHHHhhhcccceEEE
Confidence 78999999999999999999999876666779999999999999999999999999988899999999999988999999
Q ss_pred EeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHH-----HHHHHHHHHHHcCCccEEecC
Q 024050 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIE-----ETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~-----~~~~~L~~l~~~G~ir~iGvS 162 (273)
+||++.... -+++.+++-++++|++|++||+|+|+||..+.. ..+ ..++.+++++++|+||++|+|
T Consensus 81 aTKlp~~~~--------~~~edm~r~fneqLekl~~Dy~D~yliH~l~~e-~~~k~~~~g~~df~~kak~eGkIr~~GFS 151 (391)
T COG1453 81 ATKLPSWPV--------KDREDMERIFNEQLEKLGTDYIDYYLIHGLNTE-TWEKIERLGVFDFLEKAKAEGKIRNAGFS 151 (391)
T ss_pred EeecCCccc--------cCHHHHHHHHHHHHHHhCCchhhhhhhccccHH-HHHHHHccChHHHHHHHHhcCcEEEeeec
Confidence 999985431 358899999999999999999999999999773 222 369999999999999999999
Q ss_pred CCC-HHHHHHHhhcCCceEEeeeccccccccc--ccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 163 EAS-PGTIRRAHAVHPITAVQMEWSLWTRDIE--EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 163 ~~~-~~~l~~~~~~~~~~~~q~~~~l~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
.|+ .+.+.+++...+++++|++||.++.... .+.+++|.++|++|+.++|+.+|-|... + +
T Consensus 152 fHgs~e~~~~iv~a~~~dfvqlq~ny~d~~n~~~~~~l~~A~~~~~gI~IMeP~~gG~l~~~-----v-----------P 215 (391)
T COG1453 152 FHGSTEVFKEIVDAYPWDFVQLQYNYIDQKNQAGTEGLKYAASKGLGIFIMEPLDGGGLLYN-----V-----------P 215 (391)
T ss_pred CCCCHHHHHHHHhcCCcceEEeeeeeeccchhcccHHHHHHHhCCCcEEEEeeCCCCCcccC-----C-----------C
Confidence 985 5789999999999999999999998754 4899999999999999999999987742 1 2
Q ss_pred hhHHHHHHhcC--CChHHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHR--EPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~--~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..+++++...+ .|+...|++|++++|.|+++.+|
T Consensus 216 ~~~~~l~~~~~~~~sP~~wa~R~~~shp~V~~vlsG 251 (391)
T COG1453 216 EKLEELCRPASPKRSPAEWALRYLLSHPEVTTVLSG 251 (391)
T ss_pred HHHHHHHHhcCCCCCcHHHHHHHHhcCCCeEEEecC
Confidence 23456666554 57888999999999999999987
|
|
| >KOG3023 consensus Glutamate-cysteine ligase regulatory subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.4e-06 Score=69.11 Aligned_cols=71 Identities=17% Similarity=0.200 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecc
Q 024050 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~s 211 (273)
+.+.|+.|++++.+|+|..||||.|++.+|++++... .|.++|+...-...-+ .++.++|.+|+|.+...+
T Consensus 155 lkplwk~LE~lv~~~kI~~lGvSDfda~qLe~Li~saqVvP~snqVnL~~cCvvP-pdLqafa~~hdiQLltHs 227 (285)
T KOG3023|consen 155 LKPLWKLLEELVGEGKIGTLGVSDFDANQLERLISSAQVVPESNQVNLGQCCVVP-PDLQAFADRHDIQLLTHS 227 (285)
T ss_pred HHHHHHHHHHHhccCceeeeeecccCHHHHHHHHhhhccccccceeeccccccCC-HHHHHHhhhcceeeeecC
Confidence 3468999999999999999999999999999999884 5667777655554444 789999999999999875
|
|
| >cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.91 Score=40.15 Aligned_cols=155 Identities=11% Similarity=0.066 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+.+.|++.|+.-- |.. ..+...=+.+++.-. ++-|.-+.... ++.+... .+-+.
T Consensus 134 ~~~~~~~~~~~~~~~Gf~~iKik~--g~~~~~d~~~v~~lr~~~g-~~~l~vD~n~~----------~~~~~A~-~~~~~ 199 (316)
T cd03319 134 TPEAMAAAAKKAAKRGFPLLKIKL--GGDLEDDIERIRAIREAAP-DARLRVDANQG----------WTPEEAV-ELLRE 199 (316)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEe--CCChhhHHHHHHHHHHhCC-CCeEEEeCCCC----------cCHHHHH-HHHHH
Confidence 567788888999999999998753 211 122222234443222 56676665422 2333322 23334
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccc-cccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IEEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~-~~~~ 195 (273)
|+.++ +.++..|-.. +-++.+.+|++...+. ..|=+-++.+.+.++++....+++|+..+..--- .-..
T Consensus 200 l~~~~-----l~~iEeP~~~----~d~~~~~~L~~~~~ipIa~~E~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~ 270 (316)
T cd03319 200 LAELG-----VELIEQPVPA----GDDDGLAYLRDKSPLPIMADESCFSAADAARLAGGGAYDGINIKLMKTGGLTEALR 270 (316)
T ss_pred HHhcC-----CCEEECCCCC----CCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHH
Confidence 45444 4444444322 2466777888877766 2344557888999999988899999977665321 1267
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+-+..+
T Consensus 271 ~~~~a~~~gi~~~~~~~~~~~ 291 (316)
T cd03319 271 IADLARAAGLKVMVGCMVESS 291 (316)
T ss_pred HHHHHHHcCCCEEEECchhhH
Confidence 899999999999987555433
|
The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily | Back alignment and domain information |
|---|
Probab=92.54 E-value=2.8 Score=37.62 Aligned_cols=154 Identities=12% Similarity=0.093 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC-----CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-----NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSC 113 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-----g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~ 113 (273)
+.++..+.++.+.+.|++.|-.--..+. -+-...+=+.+++.-.+++.|...... .++.+...
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~d~~~v~~ir~~~g~~~~l~vDaN~----------~~~~~~a~-- 206 (357)
T cd03316 139 SPEELAEEAKRAVAEGFTAVKLKVGGPDSGGEDLREDLARVRAVREAVGPDVDLMVDANG----------RWDLAEAI-- 206 (357)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHH--
Confidence 4677888888889999998765322211 011122223444322345555555421 13444333
Q ss_pred HHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc
Q 024050 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI 192 (273)
Q Consensus 114 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~ 192 (273)
+.+++|. ..++.+++.|-.. +.++.+.++++.-.+. ..|=|.++++.++++++....+++|+..+..---.
T Consensus 207 --~~~~~l~--~~~i~~iEqP~~~----~~~~~~~~l~~~~~ipi~~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~ 278 (357)
T cd03316 207 --RLARALE--EYDLFWFEEPVPP----DDLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPDVTKVGGIT 278 (357)
T ss_pred --HHHHHhC--ccCCCeEcCCCCc----cCHHHHHHHHHhCCCCEEeccccccHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 3333332 2345556666432 2567777888776555 33335578899999998888889998766653211
Q ss_pred -cccHHHHHHHhCCeEEeccc
Q 024050 193 -EEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 193 -~~~l~~~~~~~gi~v~a~sp 212 (273)
-..+...|+++|+.++..+.
T Consensus 279 ~~~~i~~~a~~~g~~~~~~~~ 299 (357)
T cd03316 279 EAKKIAALAEAHGVRVAPHGA 299 (357)
T ss_pred HHHHHHHHHHHcCCeEeccCC
Confidence 16799999999999887754
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD). |
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=90.93 E-value=1.7 Score=40.15 Aligned_cols=109 Identities=19% Similarity=0.276 Sum_probs=71.5
Q ss_pred cCcceeccccCCC----CCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCC
Q 024050 20 VSKLGYGCMNLSG----GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAG 95 (273)
Q Consensus 20 vs~lglG~~~~~~----~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~ 95 (273)
|-++++|..+|.. ..|+.-+.+++..+++.+.+.|+.-|-.-=.|| .
T Consensus 148 vNRiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIyg--------------l--------------- 198 (416)
T COG0635 148 VNRISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFTSINIDLIYG--------------L--------------- 198 (416)
T ss_pred CCEEEeccccCCHHHHHHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecC--------------C---------------
Confidence 3488888877754 124444677888888888888877665555665 1
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEec-CCCCC----------CCH----HHHHHHH-HHHHHcCCccEE
Q 024050 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH-RVDTS----------VPI----EETIGEM-KKLVEEGKIKYI 159 (273)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~----------~~~----~~~~~~L-~~l~~~G~ir~i 159 (273)
|..+.+.+.+.+++.++ |+.|+|.+|.+- -|... .|. .+.++.. +.|.+.|. +.+
T Consensus 199 -------P~QT~~~~~~~l~~a~~-l~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy-~~y 269 (416)
T COG0635 199 -------PGQTLESLKEDLEQALE-LGPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGY-RQY 269 (416)
T ss_pred -------CCCCHHHHHHHHHHHHh-CCCCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCC-cEE
Confidence 11356777777777766 779999999884 44211 111 1344443 55667777 899
Q ss_pred ecCCCCH
Q 024050 160 GLSEASP 166 (273)
Q Consensus 160 GvS~~~~ 166 (273)
|+|||.-
T Consensus 270 eisnfa~ 276 (416)
T COG0635 270 EISNFAK 276 (416)
T ss_pred eechhcC
Confidence 9999975
|
|
| >PRK08392 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.98 E-value=7.8 Score=32.20 Aligned_cols=149 Identities=17% Similarity=0.143 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc---C-CCCCE--EEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 41 EDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ---L-PREKI--QVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~---~-~r~~~--~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
....++++.|.+.|++.|=.+++......+ -+-..++. . .+.++ ++..-+... +.. .+..
T Consensus 14 ~~~~e~v~~A~~~Gl~~i~iTdH~~~~~~~-~~~~y~~~i~~l~~~~~i~il~GiE~~~~------------~~~-~~~~ 79 (215)
T PRK08392 14 GSVRDNIAEAERKGLRLVGISDHIHYFTPS-KFNAYINEIRQWGEESEIVVLAGIEANIT------------PNG-VDIT 79 (215)
T ss_pred CCHHHHHHHHHHcCCCEEEEccCCCccchh-hHHHHHHHHHHHhhccCceEEEeEEeeec------------CCc-chhH
Confidence 347789999999999988666665311111 12222221 1 12233 222222211 111 2233
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC-------C-HHHHHHHhhc---CCceEEee
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-------S-PGTIRRAHAV---HPITAVQM 183 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~-------~-~~~l~~~~~~---~~~~~~q~ 183 (273)
++.+++ .||+ +..+|.+.......+.++.+.++.+.+.+.-+|=-.. . .+.++++++. .. ..+
T Consensus 80 ~~~~~~--~D~v-I~SvH~~~~~~~~~~Y~~~~~~~~~~~~~dvlgH~d~~~~~~~~~~~~~~~~i~~~~~~~g---~~l 153 (215)
T PRK08392 80 DDFAKK--LDYV-IASVHEWFGRPEHHEYIELVKLALMDENVDIIGHFGNSFPYIGYPSEEELKEILDLAEAYG---KAF 153 (215)
T ss_pred HHHHhh--CCEE-EEEeecCcCCcHHHHHHHHHHHHHhcCCCCEEeCCCccccCCCCchHHHHHHHHHHHHHhC---CEE
Confidence 344443 4666 6778954333335678889999999998777764321 1 1233333322 11 112
Q ss_pred ecccccccccccHHHHHHHhCCeEEe
Q 024050 184 EWSLWTRDIEEEIIPLCRELGIGIVP 209 (273)
Q Consensus 184 ~~~l~~~~~~~~l~~~~~~~gi~v~a 209 (273)
+.|-..+.+...+++.|++.|+.++.
T Consensus 154 EiNt~~~~p~~~~l~~~~~~G~~~~i 179 (215)
T PRK08392 154 EISSRYRVPDLEFIRECIKRGIKLTF 179 (215)
T ss_pred EEeCCCCCCCHHHHHHHHHcCCEEEE
Confidence 22221122235788999999876543
|
|
| >cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily | Back alignment and domain information |
|---|
Probab=88.77 E-value=14 Score=31.59 Aligned_cols=157 Identities=15% Similarity=0.145 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+.+.|++.|-.--.-.+ ..+...=+.+++.-.+++.|.-.... .++.+...+-+ +.|
T Consensus 85 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~-~~d~~~v~~vr~~~g~~~~l~vDan~----------~~~~~~a~~~~-~~l 152 (265)
T cd03315 85 EPAEVAEEARRALEAGFRTFKLKVGRDP-ARDVAVVAALREAVGDDAELRVDANR----------GWTPKQAIRAL-RAL 152 (265)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCCH-HHHHHHHHHHHHhcCCCCEEEEeCCC----------CcCHHHHHHHH-HHH
Confidence 4577778888889999998875421111 12222233444422335545444321 13444333332 333
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-cccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~l 196 (273)
+.++ +.+++.|-.. +.++.+.++++.-.+. ..|=+-++++.+.++++...++++|+..+..---. -..+
T Consensus 153 ~~~~-----i~~iEeP~~~----~d~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~ 223 (265)
T cd03315 153 EDLG-----LDYVEQPLPA----DDLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRV 223 (265)
T ss_pred HhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHH
Confidence 4444 4445555432 2356677777776555 33445578888999888888899999877654311 2678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 224 ~~~A~~~gi~~~~~~~~~s~ 243 (265)
T cd03315 224 LAVAEALGLPVMVGSMIESG 243 (265)
T ss_pred HHHHHHcCCcEEecCccchH
Confidence 99999999999987666544
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions. |
| >PRK10550 tRNA-dihydrouridine synthase C; Provisional | Back alignment and domain information |
|---|
Probab=88.49 E-value=16 Score=32.44 Aligned_cols=132 Identities=11% Similarity=0.006 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHHHCCCCcccc---cc-----CCCCC----cHHHHHHHHHhcC---CCCCEEEEeccCcCCCCCccccc
Q 024050 39 SEEDGISMIKHAFSKGITFFDT---AD-----VYGQN----ANEVLLGKALKQL---PREKIQVATKFGIAGIGVAGVIV 103 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dt---A~-----~Yg~g----~se~~lg~~l~~~---~r~~~~i~tK~~~~~~~~~~~~~ 103 (273)
+.++..++...+.+.|+..||. ++ .||.| ..-+.+.+.++.. -..++-|+.|+.....
T Consensus 73 ~p~~~~~aA~~~~~~g~d~IdiN~GCP~~~v~~~g~Gs~Ll~~~~~~~eiv~avr~~~~~~~pVsvKiR~g~~------- 145 (312)
T PRK10550 73 YPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVTVKVRLGWD------- 145 (312)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCchHHhcCCCchHhhcCHHHHHHHHHHHHHhcCCCcceEEEEECCCC-------
Confidence 6788888888888999988883 22 25544 2334555555541 1225778888754320
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHH---HHHHHHHHHHcCCccEEecCC-CCHHHHHHHhhcCCce
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEE---TIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPIT 179 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~---~~~~L~~l~~~G~ir~iGvS~-~~~~~l~~~~~~~~~~ 179 (273)
+.+. ...+-+.++..| +|.+.+|.-........ -|+...++++.-.|--||.-. .+++..+++++....+
T Consensus 146 --~~~~-~~~~a~~l~~~G---vd~i~Vh~Rt~~~~y~g~~~~~~~i~~ik~~~~iPVi~nGdI~t~~da~~~l~~~g~D 219 (312)
T PRK10550 146 --SGER-KFEIADAVQQAG---ATELVVHGRTKEDGYRAEHINWQAIGEIRQRLTIPVIANGEIWDWQSAQQCMAITGCD 219 (312)
T ss_pred --CchH-HHHHHHHHHhcC---CCEEEECCCCCccCCCCCcccHHHHHHHHhhcCCcEEEeCCcCCHHHHHHHHhccCCC
Confidence 1122 235556677777 57778886544322111 367788888877788888777 4788888888766666
Q ss_pred EEee
Q 024050 180 AVQM 183 (273)
Q Consensus 180 ~~q~ 183 (273)
.+++
T Consensus 220 gVmi 223 (312)
T PRK10550 220 AVMI 223 (312)
T ss_pred EEEE
Confidence 6665
|
|
| >cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily | Back alignment and domain information |
|---|
Probab=88.40 E-value=4.7 Score=34.36 Aligned_cols=105 Identities=17% Similarity=0.138 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEecCCCCHHHHHHHhhcCCceEEee
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
++.+...+-++ .|..+|+++|.+-..-.+.......+.++.++++.+.+ .++...++....+.++.+.+.. ++.+++
T Consensus 16 ~s~e~~~~i~~-~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~~~~~~l~~~~~~~i~~a~~~g-~~~i~i 93 (265)
T cd03174 16 FSTEDKLEIAE-ALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPNVKLQALVRNREKGIERALEAG-VDEVRI 93 (265)
T ss_pred CCHHHHHHHHH-HHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCCcEEEEEccCchhhHHHHHhCC-cCEEEE
Confidence 45555554444 47789999998887665533222356788888899888 5776677765566677766654 455666
Q ss_pred eccccc--------c------cccccHHHHHHHhCCeEEecc
Q 024050 184 EWSLWT--------R------DIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 184 ~~~l~~--------~------~~~~~l~~~~~~~gi~v~a~s 211 (273)
.+..-+ + +.....+++++++|+.+...-
T Consensus 94 ~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~ 135 (265)
T cd03174 94 FDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSL 135 (265)
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 554431 1 111567888899998877654
|
The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM". |
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=86.91 E-value=11 Score=30.83 Aligned_cols=149 Identities=12% Similarity=0.032 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.+++.+.++.|++.|++..|.-...- -..-..+|+... ++++++.-=. ...+.+++.+....
T Consensus 10 d~~~~~~~v~~~l~~g~~~~~i~~~~l-~p~m~~iG~~w~---~gei~va~~~-------------~a~~~~~~~l~~l~ 72 (197)
T TIGR02370 10 EEDDVVEGAQKALDAGIDPIELIEKGL-MAGMGVVGKLFE---DGELFLPHVM-------------MSADAMLAGIKVLT 72 (197)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHc---CCCccHHHHH-------------HHHHHHHHHHHHHH
Confidence 789999999999999998776432110 012233444333 4454432111 12334455555544
Q ss_pred HHcCCC----cccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 119 KRLDVD----YIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 119 ~~L~~d----~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
..+..+ .---+++-.+..+...-...-.-.-+...|. +.++|. +-+++.+.+......++++.+.+++......
T Consensus 73 ~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~-~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~ 151 (197)
T TIGR02370 73 PEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGR-DVPIDTVVEKVKKEKPLMLTGSALMTTTMYG 151 (197)
T ss_pred HHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCC-CCCHHHHHHHHHHcCCCEEEEccccccCHHH
Confidence 444321 1123344444333333333333345666776 677784 4566777777888888888887776554333
Q ss_pred -ccHHHHHHHhCC
Q 024050 194 -EEIIPLCRELGI 205 (273)
Q Consensus 194 -~~l~~~~~~~gi 205 (273)
.++++.+++.|.
T Consensus 152 ~~~~i~~l~~~~~ 164 (197)
T TIGR02370 152 QKDINDKLKEEGY 164 (197)
T ss_pred HHHHHHHHHHcCC
Confidence 778888988854
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate | Back alignment and domain information |
|---|
Probab=85.59 E-value=29 Score=31.81 Aligned_cols=150 Identities=13% Similarity=0.113 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+.++.+.+ .|++.|=.--.-.....+...=+++++ .+ ++.|..-... .++++. ..+
T Consensus 168 ~~e~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avRea~~--~~~l~vDaN~----------~w~~~~----A~~ 231 (395)
T cd03323 168 TPEGVVRLARAAIDRYGFKSFKLKGGVLPGEEEIEAVKALAEAFP--GARLRLDPNG----------AWSLET----AIR 231 (395)
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEecCCCCHHHHHHHHHHHHHhCC--CCcEEEeCCC----------CcCHHH----HHH
Confidence 56777777777775 699876432210000111222234443 32 3444443221 134443 333
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-cc
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EE 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~ 194 (273)
.+++|. + ++.++..|-. -++.+.+|++...+- ..|=|.++...+.++++..-++++|...+..---. -.
T Consensus 232 ~~~~l~-~--~l~~iEeP~~------d~~~~~~L~~~~~~PIa~dEs~~~~~~~~~~i~~~avdil~~d~~~~GGit~~~ 302 (395)
T cd03323 232 LAKELE-G--VLAYLEDPCG------GREGMAEFRRATGLPLATNMIVTDFRQLGHAIQLNAVDIPLADHHFWGGMRGSV 302 (395)
T ss_pred HHHhcC-c--CCCEEECCCC------CHHHHHHHHHhcCCCEEcCCcccCHHHHHHHHHcCCCcEEeeccccccCHHHHH
Confidence 444553 2 6666666643 477888888887665 55656678888999888888899998776543211 16
Q ss_pred cHHHHHHHhCCeEEecccC
Q 024050 195 EIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl 213 (273)
.+...|+++|+.+...+..
T Consensus 303 kia~~A~~~gi~~~~h~~~ 321 (395)
T cd03323 303 RVAQVCETWGLGWGMHSNN 321 (395)
T ss_pred HHHHHHHHcCCeEEEecCc
Confidence 7999999999999988765
|
GlucD belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >PRK13958 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=84.97 E-value=4.2 Score=33.76 Aligned_cols=67 Identities=16% Similarity=0.213 Sum_probs=45.5
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC-CCCHHHHHHHhhcCCceEEeeec
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEW 185 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~~ 185 (273)
....+|.|++-+++........+. +....+.+.. .+.++.+||. |-+++.+.++.+...++++|++-
T Consensus 16 ~~~~~GaD~iGfIf~~~SpR~V~~-~~a~~i~~~~-~~~~~~VgVf~~~~~~~i~~~~~~~~~d~vQLHG 83 (207)
T PRK13958 16 AASQLPIDAIGFIHYEKSKRHQTI-TQIKKLASAV-PNHIDKVCVVVNPDLTTIEHILSNTSINTIQLHG 83 (207)
T ss_pred HHHHcCCCEEEEecCCCCcccCCH-HHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhCCCCEEEECC
Confidence 345599999999754432222333 3333333332 3568889996 78899999999988999999965
|
|
| >cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain | Back alignment and domain information |
|---|
Probab=84.47 E-value=25 Score=30.13 Aligned_cols=25 Identities=8% Similarity=0.177 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCccccc
Q 024050 37 PVSEEDGISMIKHAFSKGITFFDTA 61 (273)
Q Consensus 37 ~~~~~~~~~~l~~A~~~Gin~~DtA 61 (273)
..+.++..++++...+.||..++..
T Consensus 18 ~~~~~~k~~i~~~L~~~Gv~~iEvg 42 (263)
T cd07943 18 QFTLEQVRAIARALDAAGVPLIEVG 42 (263)
T ss_pred ecCHHHHHHHHHHHHHcCCCEEEee
Confidence 4578999999999999999999987
|
4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate |
| >cd03322 rpsA The starvation sensing protein RpsA from E | Back alignment and domain information |
|---|
Probab=84.39 E-value=27 Score=31.55 Aligned_cols=146 Identities=10% Similarity=0.049 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+.+.|++.|=.-- .+.+ +++++.-.+++.|..-... .++.+.. .+.+
T Consensus 126 ~~~~~~~~a~~~~~~Gf~~~KiKv-------~~~v-~avre~~G~~~~l~vDaN~----------~w~~~~A----~~~~ 183 (361)
T cd03322 126 DIPELLEAVERHLAQGYRAIRVQL-------PKLF-EAVREKFGFEFHLLHDVHH----------RLTPNQA----ARFG 183 (361)
T ss_pred CHHHHHHHHHHHHHcCCCeEeeCH-------HHHH-HHHHhccCCCceEEEECCC----------CCCHHHH----HHHH
Confidence 456677778888889998664210 2222 2344322234444332211 1344432 2233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-cccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~l 196 (273)
++|. .+++.++..|-+. +-++.+.+|++...+. ..|=|.+++..+..+++...++++|+..+..---. -..+
T Consensus 184 ~~l~--~~~l~~iEeP~~~----~d~~~~~~L~~~~~~pia~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i 257 (361)
T cd03322 184 KDVE--PYRLFWMEDPTPA----ENQEAFRLIRQHTATPLAVGEVFNSIWDWQNLIQERLIDYIRTTVSHAGGITPARKI 257 (361)
T ss_pred HHhh--hcCCCEEECCCCc----ccHHHHHHHHhcCCCCEEeccCCcCHHHHHHHHHhCCCCEEecCccccCCHHHHHHH
Confidence 3332 2466666666432 3477788888887765 56667788999999998888889998776543211 1678
Q ss_pred HHHHHHhCCeEEeccc
Q 024050 197 IPLCRELGIGIVPYSP 212 (273)
Q Consensus 197 ~~~~~~~gi~v~a~sp 212 (273)
.+.|+++|+.+...+.
T Consensus 258 a~~A~~~gi~~~~h~~ 273 (361)
T cd03322 258 ADLASLYGVRTGWHGP 273 (361)
T ss_pred HHHHHHcCCeeeccCC
Confidence 9999999999987644
|
coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.54 E-value=6.3 Score=36.02 Aligned_cols=83 Identities=12% Similarity=0.161 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+......++++|++.|++++|||.+.. ....+..- ..+..+.+..-+|..+ ..+--.....+++-.
T Consensus 77 p~~~~~~i~ka~i~~gv~yvDts~~~~---~~~~~~~~---a~~Agit~v~~~G~dP--------Gi~nv~a~~a~~~~~ 142 (389)
T COG1748 77 PPFVDLTILKACIKTGVDYVDTSYYEE---PPWKLDEE---AKKAGITAVLGCGFDP--------GITNVLAAYAAKELF 142 (389)
T ss_pred CchhhHHHHHHHHHhCCCEEEcccCCc---hhhhhhHH---HHHcCeEEEcccCcCc--------chHHHHHHHHHHHhh
Confidence 455566999999999999999998775 22222222 2244555555444322 232222333333333
Q ss_pred HHcCCCcccEEEecCCCCC
Q 024050 119 KRLDVDYIDLYYQHRVDTS 137 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~ 137 (273)
+ .++++|+|..+.|++.
T Consensus 143 ~--~i~si~iy~g~~g~~~ 159 (389)
T COG1748 143 D--EIESIDIYVGGLGEHG 159 (389)
T ss_pred c--cccEEEEEEecCCCCC
Confidence 3 5899999999999876
|
|
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=83.49 E-value=23 Score=29.01 Aligned_cols=149 Identities=17% Similarity=0.128 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.+++.++++.|++.|+...|.-..+= -..-..+|+... ++++++.-=. ...+.+++.+....
T Consensus 9 D~~~~~~~v~~~l~~g~~~~~i~~~~l-~p~m~~vG~~w~---~~~i~va~e~-------------~as~~~~~~l~~l~ 71 (201)
T cd02070 9 DEEETVELVKKALEAGIDPQDIIEEGL-APGMDIVGDKYE---EGEIFVPELL-------------MAADAMKAGLDLLK 71 (201)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHc---cCCeeHHHHH-------------HHHHHHHHHHHHHH
Confidence 789999999999999987665332110 012233444333 4454443211 11233444444444
Q ss_pred HHcCCCc---ccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 119 KRLDVDY---IDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 119 ~~L~~d~---iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
..+.... ---+++-.+..+...-...=.-.-|+..|. +.++| .+.+++.+.+......++++-+..++-.....
T Consensus 72 ~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG-~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~ 150 (201)
T cd02070 72 PLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLG-RDVPPEEFVEAVKEHKPDILGLSALMTTTMGGM 150 (201)
T ss_pred HHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHcCCCEEEEeccccccHHHH
Confidence 4443221 123444554444433333333345677887 46778 66677888888777788888887765554322
Q ss_pred ccHHHHHHHhCC
Q 024050 194 EEIIPLCRELGI 205 (273)
Q Consensus 194 ~~l~~~~~~~gi 205 (273)
.++++.+++.+.
T Consensus 151 ~~~i~~lr~~~~ 162 (201)
T cd02070 151 KEVIEALKEAGL 162 (201)
T ss_pred HHHHHHHHHCCC
Confidence 778888888753
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PF00682 HMGL-like: HMGL-like of this family is not conserved in other members | Back alignment and domain information |
|---|
Probab=83.45 E-value=13 Score=31.07 Aligned_cols=162 Identities=15% Similarity=0.220 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHHCCCCccccc-cCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTA-DVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA-~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
.+.++..++++...+.||..|+.. +..++ ...+.+.+..+..+...+...+. ...+.++..++.
T Consensus 11 ~~~~~k~~i~~~L~~~Gv~~iEvg~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~i~~~~~~ 75 (237)
T PF00682_consen 11 FSTEEKLEIAKALDEAGVDYIEVGFPFASE-DDFEQVRRLREALPNARLQALCR--------------ANEEDIERAVEA 75 (237)
T ss_dssp --HHHHHHHHHHHHHHTTSEEEEEHCTSSH-HHHHHHHHHHHHHHSSEEEEEEE--------------SCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCEEEEcccccCH-HHHHHhhhhhhhhcccccceeee--------------ehHHHHHHHHHh
Confidence 578999999999999999999999 33331 22333444443323333322222 225556666654
Q ss_pred HHHHcCCCcccEEEecCCCC---------CCCHHHHHHHHHHHHHcCCccEEecCC---CCHHHHHHHhhc---CCceEE
Q 024050 117 SLKRLDVDYIDLYYQHRVDT---------SVPIEETIGEMKKLVEEGKIKYIGLSE---ASPGTIRRAHAV---HPITAV 181 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~---------~~~~~~~~~~L~~l~~~G~ir~iGvS~---~~~~~l~~~~~~---~~~~~~ 181 (273)
. ...|.+.+.++.--++.. ...++...+.++..++.|..-.+++.. ++++.+.++.+. ..++.+
T Consensus 76 ~-~~~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~v~~ak~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i 154 (237)
T PF00682_consen 76 A-KEAGIDIIRIFISVSDLHIRKNLNKSREEALERIEEAVKYAKELGYEVAFGCEDASRTDPEELLELAEALAEAGADII 154 (237)
T ss_dssp H-HHTTSSEEEEEEETSHHHHHHHTCSHHHHHHHHHHHHHHHHHHTTSEEEEEETTTGGSSHHHHHHHHHHHHHHT-SEE
T ss_pred h-HhccCCEEEecCcccHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCceEeCccccccccHHHHHHHHHHHHHcCCeEE
Confidence 4 467777777665332200 011344556667777888877777744 455554444332 123333
Q ss_pred ee--ecccccccccccHHHHHHHh----CCeEEecccCCC
Q 024050 182 QM--EWSLWTRDIEEEIIPLCREL----GIGIVPYSPLGR 215 (273)
Q Consensus 182 q~--~~~l~~~~~~~~l~~~~~~~----gi~v~a~spl~~ 215 (273)
.+ .+..+.+....++++..+++ .+++..+.-++.
T Consensus 155 ~l~Dt~G~~~P~~v~~lv~~~~~~~~~~~l~~H~Hnd~Gl 194 (237)
T PF00682_consen 155 YLADTVGIMTPEDVAELVRALREALPDIPLGFHAHNDLGL 194 (237)
T ss_dssp EEEETTS-S-HHHHHHHHHHHHHHSTTSEEEEEEBBTTS-
T ss_pred EeeCccCCcCHHHHHHHHHHHHHhccCCeEEEEecCCccc
Confidence 32 33344443235566666553 355555555543
|
are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A .... |
| >COG1140 NarY Nitrate reductase beta subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.05 E-value=0.5 Score=42.27 Aligned_cols=55 Identities=16% Similarity=0.283 Sum_probs=35.2
Q ss_pred HcCCccEEecCCCCHHHHHHHhhcCC-ceEEeeecccccccccccHHHHHHHhCCe
Q 024050 152 EEGKIKYIGLSEASPGTIRRAHAVHP-ITAVQMEWSLWTRDIEEEIIPLCRELGIG 206 (273)
Q Consensus 152 ~~G~ir~iGvS~~~~~~l~~~~~~~~-~~~~q~~~~l~~~~~~~~l~~~~~~~gi~ 206 (273)
=-|+|||+||--|+++.++++..... -+..+.+..++-......+++.|++.||.
T Consensus 262 CVGriRYlGVlLYDaDrv~eaAs~~~e~dly~~Q~~ifLDP~DP~Vi~~A~k~Gip 317 (513)
T COG1140 262 CVGRIRYLGVLLYDADRVEEAASTENEKDLYERQLDVFLDPHDPAVIEQARKDGIP 317 (513)
T ss_pred hhcceeeeeeeeecHHHHHHhhcCccHHHHHHHHHhhhcCCCCHHHHHHHHHcCCc
Confidence 45999999999999999988876521 22223333333222235677777777754
|
|
| >cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain | Back alignment and domain information |
|---|
Probab=82.58 E-value=32 Score=29.94 Aligned_cols=151 Identities=13% Similarity=0.111 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccc----------cCCCCCcHHHHHHHHHhcCCCC-CEEEEeccCcCCCCCccccccCCH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTA----------DVYGQNANEVLLGKALKQLPRE-KIQVATKFGIAGIGVAGVIVKGAP 107 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA----------~~Yg~g~se~~lg~~l~~~~r~-~~~i~tK~~~~~~~~~~~~~~~~~ 107 (273)
+.++..++.+.+.+.|+..||.- ..|+ .+.+.+-+.++...+. ++-|..|+.+..
T Consensus 100 ~~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~--~~~~~~~eiv~~vr~~~~~Pv~vKl~~~~------------ 165 (296)
T cd04740 100 TVEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFG--TDPEAVAEIVKAVKKATDVPVIVKLTPNV------------ 165 (296)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCccccc--CCHHHHHHHHHHHHhccCCCEEEEeCCCc------------
Confidence 57888899999999999888762 1222 3556666666653222 677888986432
Q ss_pred HHHHHHHHHHHHHcCCCcccEEE------ecCCCC-------------CCCHHHHHHHHHHHHHcCCccEEecCCC-CHH
Q 024050 108 DYVRSCCEASLKRLDVDYIDLYY------QHRVDT-------------SVPIEETIGEMKKLVEEGKIKYIGLSEA-SPG 167 (273)
Q Consensus 108 ~~i~~~~~~sL~~L~~d~iDl~~------lh~~~~-------------~~~~~~~~~~L~~l~~~G~ir~iGvS~~-~~~ 167 (273)
+.+ ..+-+.++..|.|.|++.- +|.-.. .....-.++.+.++++.=.+-=||+... +++
T Consensus 166 ~~~-~~~a~~~~~~G~d~i~~~nt~~g~~~~~~~~~~~~~~~~gg~sg~~~~~~~~~~i~~i~~~~~ipii~~GGI~~~~ 244 (296)
T cd04740 166 TDI-VEIARAAEEAGADGLTLINTLKGMAIDIETRKPILGNVTGGLSGPAIKPIALRMVYQVYKAVEIPIIGVGGIASGE 244 (296)
T ss_pred hhH-HHHHHHHHHcCCCEEEEECCCcccccccccCceeecCCcceecCcccchHHHHHHHHHHHhcCCCEEEECCCCCHH
Confidence 122 2334557788988777642 111000 0001125677777777656888888884 788
Q ss_pred HHHHHhhcCCceEEeeeccccc-cc----ccccHHHHHHHhCC
Q 024050 168 TIRRAHAVHPITAVQMEWSLWT-RD----IEEEIIPLCRELGI 205 (273)
Q Consensus 168 ~l~~~~~~~~~~~~q~~~~l~~-~~----~~~~l~~~~~~~gi 205 (273)
.+.+++... .+.+|+-=.++. +. ...++.++..++|.
T Consensus 245 da~~~l~~G-Ad~V~igra~l~~p~~~~~i~~~l~~~~~~~g~ 286 (296)
T cd04740 245 DALEFLMAG-ASAVQVGTANFVDPEAFKEIIEGLEAYLDEEGI 286 (296)
T ss_pred HHHHHHHcC-CCEEEEchhhhcChHHHHHHHHHHHHHHHHcCC
Confidence 888888765 577776333332 21 12556666777664
|
DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=82.46 E-value=6.2 Score=32.30 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=69.6
Q ss_pred HHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhh-c-CCceEEeeeccccccc
Q 024050 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHA-V-HPITAVQMEWSLWTRD 191 (273)
Q Consensus 114 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~-~-~~~~~~q~~~~l~~~~ 191 (273)
+++.|..+.-+..|.+.+..- ...+....+.|+++..-|+--=|++.||.-+....-+- . .-|..-.++|+.++..
T Consensus 64 ld~gL~~f~d~sFD~VIlsqt--LQ~~~~P~~vL~EmlRVgr~~IVsFPNFg~W~~R~~l~~~GrmPvt~~lPy~WYdTP 141 (193)
T PF07021_consen 64 LDEGLADFPDQSFDYVILSQT--LQAVRRPDEVLEEMLRVGRRAIVSFPNFGHWRNRLQLLLRGRMPVTKALPYEWYDTP 141 (193)
T ss_pred HHHhHhhCCCCCccEEehHhH--HHhHhHHHHHHHHHHHhcCeEEEEecChHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Confidence 344455555566666665432 11123445667888888887779999997665544333 2 3466678899988864
Q ss_pred cc-----ccHHHHHHHhCCeEEecccCCCcc
Q 024050 192 IE-----EEIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 192 ~~-----~~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
.. .+..++|++.||.|.-..++..+.
T Consensus 142 Nih~~Ti~DFe~lc~~~~i~I~~~~~~~~~~ 172 (193)
T PF07021_consen 142 NIHLCTIKDFEDLCRELGIRIEERVFLDGGR 172 (193)
T ss_pred CcccccHHHHHHHHHHCCCEEEEEEEEcCCC
Confidence 21 788999999999999999988654
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >PRK08609 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=82.43 E-value=33 Score=33.15 Aligned_cols=149 Identities=16% Similarity=0.196 Sum_probs=81.3
Q ss_pred HHHHHHHHHHCCCCccccccCCC-----CCcHHHHHHHHH------hc-CCCCCEEEEeccCcCCCCCccccccCCHHHH
Q 024050 43 GISMIKHAFSKGITFFDTADVYG-----QNANEVLLGKAL------KQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYV 110 (273)
Q Consensus 43 ~~~~l~~A~~~Gin~~DtA~~Yg-----~g~se~~lg~~l------~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i 110 (273)
..++++.|.+.|+..|=.++|+. .|.+...+-..+ ++ ...=+|++..-+.... +..
T Consensus 351 leemv~~A~~~Gl~~i~iTdH~~~~~~~~~~~~~~l~~~~~ei~~l~~~~~~i~Il~GiEv~i~~------------~g~ 418 (570)
T PRK08609 351 IEEMVEACIAKGYEYMAITDHSQYLKVANGLTEERLLEQAEEIKALNEKYPEIDILSGIEMDILP------------DGS 418 (570)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCccccCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeecC------------Ccc
Confidence 56699999999999888887763 122333233222 22 1112333333332211 111
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC------CC--HHHHHHHhhc---CCce
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------AS--PGTIRRAHAV---HPIT 179 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~------~~--~~~l~~~~~~---~~~~ 179 (273)
..-.+..|+. .||+ +..+|++.. .+.++.++.+.++.+.|.+.-||=-. +. ...++++++. .. .
T Consensus 419 ~d~~~~~L~~--~D~v-I~SvH~~~~-~~~~~~~~~l~~a~~~~~~dILaHpd~rli~~~~~~~~d~~~i~~~a~~~G-~ 493 (570)
T PRK08609 419 LDYDDEVLAE--LDYV-IAAIHSSFS-QSEEEIMKRLENACRNPYVRLIAHPTGRLIGRRDGYDVNIDQLIELAKETN-T 493 (570)
T ss_pred hhhcHHHHHh--hCEE-EEEeecCCC-CCHHHHHHHHHHHhcCCCceEEECCCccccccCCCchHHHHHHHHHHHHhC-C
Confidence 2222334444 4666 777887532 44577888999999989887776443 11 1223333322 21 3
Q ss_pred EEeeecccccccccccHHHHHHHhCCeEE
Q 024050 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIV 208 (273)
Q Consensus 180 ~~q~~~~l~~~~~~~~l~~~~~~~gi~v~ 208 (273)
++|++-+.+.......+++.|.+.|+.++
T Consensus 494 ~lEINa~~~r~~~~~~~~~~~~e~Gv~i~ 522 (570)
T PRK08609 494 ALELNANPNRLDLSAEHLKKAQEAGVKLA 522 (570)
T ss_pred EEEEcCCccccCccHHHHHHHHHcCCEEE
Confidence 45555544332233678889999888654
|
|
| >cd00740 MeTr MeTr subgroup of pterin binding enzymes | Back alignment and domain information |
|---|
Probab=81.28 E-value=30 Score=29.59 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEe
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQ 182 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q 182 (273)
.+++.+.+..++.++ -|.|+||+-. .|......++..+.+..+++.-.+ -|.+-+++++.++++++. ... +-
T Consensus 23 ~~~d~~~~~A~~~~~-~GAdiIDIG~--~~~~~~~~ee~~r~v~~i~~~~~~-piSIDT~~~~v~e~aL~~~~G~~--iI 96 (252)
T cd00740 23 EDYDEALDVARQQVE-GGAQILDLNV--DYGGLDGVSAMKWLLNLLATEPTV-PLMLDSTNWEVIEAGLKCCQGKC--VV 96 (252)
T ss_pred CCHHHHHHHHHHHHH-CCCCEEEECC--CCCCCCHHHHHHHHHHHHHHhcCC-cEEeeCCcHHHHHHHHhhCCCCc--EE
Confidence 456777777777765 5999999865 343222223322332223322122 378888999999999987 433 33
Q ss_pred eeccccccc-ccccHHHHHHHhCCeEEecccCCCc
Q 024050 183 MEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 183 ~~~~l~~~~-~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
+..+....+ ....+++.++++|..++.+..-..|
T Consensus 97 NsIs~~~~~e~~~~~~~~~~~~~~~vV~m~~~~~g 131 (252)
T cd00740 97 NSINLEDGEERFLKVARLAKEHGAAVVVLAFDEQG 131 (252)
T ss_pred EeCCCCCCccccHHHHHHHHHhCCCEEEeccCCCC
Confidence 444443311 1256889999999999988544333
|
This family includes cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH. |
| >cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway | Back alignment and domain information |
|---|
Probab=81.04 E-value=27 Score=31.46 Aligned_cols=156 Identities=9% Similarity=0.052 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHCC-CCccccccC-CCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKG-ITFFDTADV-YGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 40 ~~~~~~~l~~A~~~G-in~~DtA~~-Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
.++..+.+..+++.| ++.|=.--. .+.....+.+ +++++.-.+++.|.-=... .++.+...+ +-+.
T Consensus 143 ~~~~~~~~~~~~~~G~f~~~KiKvg~~~~~~d~~~v-~avr~~~g~~~~l~iDaN~----------~~~~~~A~~-~~~~ 210 (365)
T cd03318 143 TERDIAEAEEMLEAGRHRRFKLKMGARPPADDLAHV-EAIAKALGDRASVRVDVNQ----------AWDESTAIR-ALPR 210 (365)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeCCCChHHHHHHH-HHHHHHcCCCcEEEEECCC----------CCCHHHHHH-HHHH
Confidence 445556667778888 887643210 0110122333 3444422234434332211 133433222 1233
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-ccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~ 195 (273)
|+.+ ++.++..|-+. +.++.+.+|.++..+. .+|=|-++...+.++++...++++|+.....---. -..
T Consensus 211 l~~~-----~~~~iEeP~~~----~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~ 281 (365)
T cd03318 211 LEAA-----GVELIEQPVPR----ENLDGLARLRSRNRVPIMADESVSGPADAFELARRGAADVFSLKIAKSGGLRRAQK 281 (365)
T ss_pred HHhc-----CcceeeCCCCc----ccHHHHHHHHhhcCCCEEcCcccCCHHHHHHHHHhCCCCeEEEeecccCCHHHHHH
Confidence 3333 44455555332 3467788888876665 44556678888999888877888888766643211 167
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+-+..+
T Consensus 282 ~~~~a~~~gi~~~~~~~~~s~ 302 (365)
T cd03318 282 VAAIAEAAGIALYGGTMLESS 302 (365)
T ss_pred HHHHHHHcCCceeecCcchhH
Confidence 899999999999865444333
|
This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 273 | ||||
| 3v0u_A | 338 | Crystal Structure Of Perakine Reductase, Founder Me | 7e-95 | ||
| 3v0t_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 7e-95 | ||
| 3uyi_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 1e-94 | ||
| 3v0s_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 3e-92 | ||
| 1pyf_A | 312 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 1e-29 | ||
| 1ynp_A | 317 | Aldo-keto Reductase Akr11c1 From Bacillus Haloduran | 8e-27 | ||
| 1pz1_A | 333 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 5e-26 | ||
| 3n2t_A | 348 | Structure Of The Glycerol Dehydrogenase Akr11b4 Fro | 9e-23 | ||
| 3eb3_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (W121a) I | 8e-20 | ||
| 1zsx_A | 347 | Crystal Structure Of Human Potassium Channel Kv Bet | 9e-20 | ||
| 3lut_A | 367 | A Structural Model For The Full-Length Shaker Potas | 9e-20 | ||
| 1qrq_A | 325 | Structure Of A Voltage-Dependent K+ Channel Beta Su | 1e-19 | ||
| 3eau_A | 327 | Voltage-Dependent K+ Channel Beta Subunit In Comple | 1e-19 | ||
| 1exb_A | 332 | Structure Of The Cytoplasmic Beta Subunit-T1 Assemb | 1e-19 | ||
| 2a79_A | 333 | Mammalian Shaker Kv1.2 Potassium Channel- Beta Subu | 1e-19 | ||
| 3eb4_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (I211r) I | 1e-19 | ||
| 3erp_A | 353 | Structure Of Idp01002, A Putative Oxidoreductase Fr | 1e-18 | ||
| 4aub_A | 366 | The Complex Structure Of The Bacterial Aldo-Keto Re | 2e-17 | ||
| 3n6q_A | 346 | Crystal Structure Of Yghz From E. Coli Length = 346 | 2e-17 | ||
| 2bp1_B | 360 | Structure Of The Aflatoxin Aldehyde Reductase In Co | 8e-15 | ||
| 2c91_A | 338 | Mouse Succinic Semialdehyde Reductase, Akr7a5 Lengt | 1e-14 | ||
| 2clp_A | 347 | Crystal Structure Of Human Aflatoxin B1 Aldehyde Re | 2e-14 | ||
| 1lqa_A | 346 | Tas Protein From Escherichia Coli In Complex With N | 9e-14 | ||
| 1gve_A | 327 | Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Live | 2e-13 | ||
| 3up8_A | 298 | Crystal Structure Of A Putative 2,5-Diketo-D-Glucon | 1e-11 | ||
| 1og6_A | 298 | Ydhf, An Aldo-keto Reductase From E.coli Complexed | 3e-11 | ||
| 3o0k_A | 283 | Crystal Structure Of AldoKETO REDUCTASE FROM BRUCEL | 2e-10 | ||
| 1ur3_M | 319 | Crystal Structure Of The Apo Form Of The E.Coli Ydh | 2e-10 | ||
| 4gac_A | 324 | High Resolution Structure Of Mouse Aldehyde Reducta | 5e-10 | ||
| 1qwk_A | 317 | Structural Genomics Of Caenorhabditis Elegans: Hypo | 1e-08 | ||
| 3krb_A | 334 | Structure Of Aldose Reductase From Giardia Lamblia | 1e-08 | ||
| 3cv7_A | 325 | Crystal Structure Of Porcine Aldehyde Reductase Ter | 2e-08 | ||
| 1cwn_A | 324 | Crystal Structure Of Porcine Aldehyde Reductase Hol | 2e-08 | ||
| 1ae4_A | 325 | Aldehyde Reductase Complexed With Cofactor And Inhi | 3e-08 | ||
| 2alr_A | 324 | Aldehyde Reductase Length = 324 | 5e-08 | ||
| 1hqt_A | 326 | The Crystal Structure Of An Aldehyde Reductase Y50f | 6e-08 | ||
| 1sm9_A | 322 | Crystal Structure Of An Engineered K274rn276d Doubl | 1e-07 | ||
| 1ye4_A | 322 | Crystal Structure Of The Lys-274 To Arg Mutant Of C | 1e-07 | ||
| 1z9a_A | 321 | Crystal Structure Of The Asn-309 To Asp Mutant Of C | 1e-07 | ||
| 1jez_A | 322 | The Structure Of Xylose Reductase, A Dimeric Aldo-K | 1e-07 | ||
| 2bgq_A | 344 | Apo Aldose Reductase From Barley Length = 344 | 3e-07 | ||
| 4fzi_A | 290 | Crystal Structure Of Prostaglandin F Synthase From | 3e-07 | ||
| 1r38_A | 322 | Crystal Structure Of H114a Mutant Of Candida Tenuis | 3e-07 | ||
| 2wzm_A | 283 | Crystal Structure Of A Mycobacterium Aldo-Keto Redu | 2e-06 | ||
| 1vbj_A | 281 | The Crystal Structure Of Prostaglandin F Synthase F | 3e-06 | ||
| 3h7r_A | 331 | Crystal Structure Of The Plant Stress-Response Enzy | 6e-06 | ||
| 1vp5_A | 298 | Crystal Structure Of 2,5-diketo-d-gluconic Acid Red | 1e-05 | ||
| 4f40_A | 288 | X-Ray Crystal Structure Of Apo Prostaglandin F Synt | 3e-05 | ||
| 1mzr_A | 296 | Structure Of Dkga From E.Coli At 2.13 A Resolution | 3e-05 | ||
| 2ipj_A | 321 | Crystal Structure Of H3alpha-Hydroxysteroid Dehydro | 6e-05 | ||
| 1ihi_A | 323 | Crystal Structure Of Human Type Iii 3-Alpha-Hydroxy | 6e-05 | ||
| 1j96_A | 323 | Human 3alpha-Hsd Type 3 In Ternary Complex With Nad | 6e-05 | ||
| 1xjb_A | 325 | Crystal Structure Of Human Type 3 3alpha-Hydroxyste | 7e-05 | ||
| 1zua_X | 317 | Crystal Structure Of Akr1b10 Complexed With Nadp+ A | 3e-04 | ||
| 3c3u_A | 323 | Crystal Structure Of Akr1c1 In Complex With Nadp An | 4e-04 | ||
| 3gug_A | 323 | Crystal Structure Of Akr1c1 L308v Mutant In Complex | 5e-04 | ||
| 1mrq_A | 323 | Crystal Structure Of Human 20alpha-hsd In Ternary C | 5e-04 | ||
| 1ral_A | 308 | Three-Dimensional Structure Of Rat Liver 3alpha- Hy | 5e-04 | ||
| 1afs_A | 323 | Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydr | 5e-04 | ||
| 1lwi_A | 322 | 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FRO | 6e-04 | ||
| 4exa_A | 292 | Crystal Structure Of The Pa4992, The Putative Aldo- | 7e-04 |
| >pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 338 | Back alignment and structure |
|
| >pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11a(Apo) Length = 312 | Back alignment and structure |
|
| >pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo Form) Length = 317 | Back alignment and structure |
|
| >pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11b(Holo) Length = 333 | Back alignment and structure |
|
| >pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From Gluconobacter Oxydans Length = 348 | Back alignment and structure |
|
| >pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv Beta-Subunit (Kcnab2) Length = 347 | Back alignment and structure |
|
| >pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium Channel Kv1.2 Length = 367 | Back alignment and structure |
|
| >pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit Length = 325 | Back alignment and structure |
|
| >pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of Voltage-Dependent K Channels Length = 332 | Back alignment and structure |
|
| >pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit Complex Length = 333 | Back alignment and structure |
|
| >pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And Essential Gene Of Salmonella Typhimurium Length = 353 | Back alignment and structure |
|
| >pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase Akr14a1 With Nadp And Citrate Length = 366 | Back alignment and structure |
|
| >pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli Length = 346 | Back alignment and structure |
|
| >pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5 Length = 338 | Back alignment and structure |
|
| >pdb|2CLP|A Chain A, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase Member 3 Length = 347 | Back alignment and structure |
|
| >pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph Length = 346 | Back alignment and structure |
|
| >pdb|1GVE|A Chain A, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver Length = 327 | Back alignment and structure |
|
| >pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid Reductase B Length = 298 | Back alignment and structure |
|
| >pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With Nadph Length = 298 | Back alignment and structure |
|
| >pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA MELITENSIS Length = 283 | Back alignment and structure |
|
| >pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf Protein Length = 319 | Back alignment and structure |
|
| >pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase (akr1a4) In Its Apo-form Length = 324 | Back alignment and structure |
|
| >pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Hypothetical 35.2 Kda Protein (Aldose Reductase Family Member) Length = 317 | Back alignment and structure |
|
| >pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At 1.75a Resolution Length = 334 | Back alignment and structure |
|
| >pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary Complex Length = 325 | Back alignment and structure |
|
| >pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme Length = 324 | Back alignment and structure |
|
| >pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor, Alpha Carbon Atoms Only Length = 325 | Back alignment and structure |
|
| >pdb|2ALR|A Chain A, Aldehyde Reductase Length = 324 | Back alignment and structure |
|
| >pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f Mutant- Nadp Complex And Its Implications For Substrate Binding Length = 326 | Back alignment and structure |
|
| >pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double Mutant Of Xylose Reductase From Candida Tenuis Optimized To Utilize Nad Length = 322 | Back alignment and structure |
|
| >pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 322 | Back alignment and structure |
|
| >pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 321 | Back alignment and structure |
|
| >pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto Reductase From Candida Tenuis Length = 322 | Back alignment and structure |
|
| >pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley Length = 344 | Back alignment and structure |
|
| >pdb|4FZI|A Chain A, Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Cruzi Length = 290 | Back alignment and structure |
|
| >pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose Reductase Length = 322 | Back alignment and structure |
|
| >pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase In Its Apo And Liganded Form Length = 283 | Back alignment and structure |
|
| >pdb|1VBJ|A Chain A, The Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Brucei Length = 281 | Back alignment and structure |
|
| >pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme Akr4c8 Length = 331 | Back alignment and structure |
|
| >pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase (tm1009) From Thermotoga Maritima At 2.40 A Resolution Length = 298 | Back alignment and structure |
|
| >pdb|4F40|A Chain A, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase From Leishmania Major Friedlin Length = 288 | Back alignment and structure |
|
| >pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved By Molecular Replacement Length = 296 | Back alignment and structure |
|
| >pdb|2IPJ|A Chain A, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase Type 3 Mutant Y24a In Complex With Nadp+ And Epi-Testosterone Length = 321 | Back alignment and structure |
|
| >pdb|1IHI|A Chain A, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2) COMPLEXED With Nadp+ And Ursodeoxycholate Length = 323 | Back alignment and structure |
|
| >pdb|1J96|A Chain A, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And Testosterone Length = 323 | Back alignment and structure |
|
| >pdb|1XJB|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid Dehydrogenase In Complex With Nadp(H), Citrate And Acetate Molecules Length = 325 | Back alignment and structure |
|
| >pdb|1ZUA|X Chain X, Crystal Structure Of Akr1b10 Complexed With Nadp+ And Tolrestat Length = 317 | Back alignment and structure |
|
| >pdb|3C3U|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And 3,5- Dichlorosalicylic Acid Length = 323 | Back alignment and structure |
|
| >pdb|3GUG|A Chain A, Crystal Structure Of Akr1c1 L308v Mutant In Complex With Nadp And 3,5-Dichlorosalicylic Acid Length = 323 | Back alignment and structure |
|
| >pdb|1MRQ|A Chain A, Crystal Structure Of Human 20alpha-hsd In Ternary Complex With Nadp And 20alpha-hydroxy-progesterone Length = 323 | Back alignment and structure |
|
| >pdb|1RAL|A Chain A, Three-Dimensional Structure Of Rat Liver 3alpha- Hydroxysteroid(Slash)dihydrodiol Dehydrogenase: A Member Of The Aldo-Keto Reductase Superfamily Length = 308 | Back alignment and structure |
|
| >pdb|1AFS|A Chain A, Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydrogenase (3-Alpha-Hsd) Complexed With Nadp And Testosterone Length = 323 | Back alignment and structure |
|
| >pdb|1LWI|A Chain A, 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FROM Rattus Norvegicus Length = 322 | Back alignment and structure |
|
| >pdb|4EXA|A Chain A, Crystal Structure Of The Pa4992, The Putative Aldo-keto Reductase From Pseudomona Aeruginosa Length = 292 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 273 | |||
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 1e-135 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 1e-134 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 1e-119 | |
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 1e-111 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 1e-107 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 1e-101 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 4e-71 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 8e-69 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 1e-64 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 2e-64 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 1e-62 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 2e-62 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 9e-56 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 1e-25 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 4e-25 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 2e-24 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 2e-24 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 2e-24 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 1e-23 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 1e-22 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 1e-22 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 2e-22 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 2e-22 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 3e-22 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 3e-22 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 4e-22 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 4e-22 | |
| 2ao0_A | 324 | Aldehyde dehydrogenase; TIM barrel, aldo-keto redu | 5e-22 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 7e-22 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 9e-22 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 9e-22 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 1e-21 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 4e-21 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 5e-21 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 8e-21 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 2e-20 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 2e-20 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 2e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Length = 312 | Back alignment and structure |
|---|
Score = 384 bits (988), Expect = e-135
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSG-GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+ KLG L+V +G G + G ++EE G +++ A G+T DTA +YG
Sbjct: 3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 62
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
+E L+G+ L++ RE + +ATK + +PD+++ + SLKRL+ DYIDL
Sbjct: 63 SEELIGEVLREFNREDVVIATKAAHR-KQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDL 121
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
+Y H D P +E + + ++ + GKI+ IG+S S ++ A+ + +Q E++L
Sbjct: 122 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 181
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK-AVVENVPADSF 232
R+ E+ P +E I +PY PL G GK P
Sbjct: 182 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDL 226
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} Length = 348 | Back alignment and structure |
|---|
Score = 382 bits (983), Expect = e-134
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 6/231 (2%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+++ +S++ G + G +++G+ I A +GI DTA VYG
Sbjct: 18 ASDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGF 77
Query: 67 NANEVLLGKALKQLPREKIQVATKFGI----AGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
+E ++G+AL + K VATK G+ V P +R E SL+RL
Sbjct: 78 GHSEEIVGRALAEK-PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLR 136
Query: 123 VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQ 182
V+ IDL H D PI+E+ E++KL ++GKI+ +G+S SP + V P+ +Q
Sbjct: 137 VETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQ 196
Query: 183 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK-AVVENVPADSF 232
+L+ R IE++I+P + ++ Y L RG GK P D
Sbjct: 197 PPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDL 247
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Length = 333 | Back alignment and structure |
|---|
Score = 344 bits (885), Expect = e-119
Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+ G+E S++G G + G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 71 VLLGKALKQL-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
++GKA+K+ R+++ +ATK + + + E SLKRL DYIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALD-WKNNQLFRHANRARIVEEVENSLKRLQTDYIDLY 122
Query: 130 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189
H D VPIEET MK+L + GKI+ IG+S S + AV P+ +Q ++L+
Sbjct: 123 QVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFE 182
Query: 190 RDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
R++EE ++P ++ I + Y L RG GK
Sbjct: 183 REMEESVLPYAKDNKITTLLYGSLCRGLLTGK 214
|
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Length = 337 | Back alignment and structure |
|---|
Score = 324 bits (831), Expect = e-111
Identities = 169/251 (67%), Positives = 205/251 (81%), Gaps = 3/251 (1%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+PRVKLGTQGLEVSKLG+GCM LSG Y+ + EE GI++IK AF+ GITFFDT+D+YG+N
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 68 -ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
+NE LLGKALKQLPRE IQV TKFGI IG +GV G PDYVRSCCEASLKRLDVDYI
Sbjct: 61 GSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYI 120
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DL+Y HR+DT+VPIE T+GE+ LVEEGKI Y+GLSEASP TIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246
LWTRDIE+EI+PLCR+LGIGIVPYSP+GRG F GKA+ E++P +S P E L
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSV--LTSHPRFVGENL 238
Query: 247 FSHREPCQKVQ 257
+++ +++
Sbjct: 239 EKNKQIYYRIE 249
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Length = 317 | Back alignment and structure |
|---|
Score = 312 bits (801), Expect = e-107
Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+LGT L VS+LG+GCM+L E ++ GI + DTAD+Y Q NE
Sbjct: 24 RQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNE 77
Query: 71 VLLGKALKQLPREKIQVATKFGIA-GIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
+GKALK R+ I +ATK G G G + Y++ + SL+RL DYIDLY
Sbjct: 78 QFVGKALKG-RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLY 136
Query: 130 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189
H PI+ETI ++L +EG I+Y G+S P I+ I ++ M++S+
Sbjct: 137 QLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILD 196
Query: 190 RDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
R EE PL +E G+ +V P+ RG +
Sbjct: 197 RRP-EEWFPLIQEHGVSVVVRGPVARGLLSRR 227
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Length = 319 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = e-101
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
+ ++ V R+ + QG E S+ G L +S +S I+ G+T D
Sbjct: 16 LYKKAGLVQRITIAPQGPEFSRFVMGYWRLMD---WNMSARQLVSFIEEHLDLGVTTVDH 72
Query: 61 ADVYGQNANEVLLGKALKQLP--REKIQVATKFGIAGIGVAGVIVKGA---PDYVRSCCE 115
AD+YG E G+ALK P RE++++ +K GIA ++ D++ E
Sbjct: 73 ADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAE 132
Query: 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175
SL L D++DL HR D + +E K L + GK+++ G+S +P +
Sbjct: 133 QSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSR 192
Query: 176 --HPITAVQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGG 220
+ Q+E S + + + + ++L + + +S LG G
Sbjct: 193 LPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFN 240
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Length = 327 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 8e-69
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 20 VSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ 79
G M + G + + ++ +G T DTA VY +E +LG
Sbjct: 5 RPATVLGAMEM-GR---RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLG 60
Query: 80 LP--REKIQVATKFGIAGIGVAGVIVKGA-PDYVRSCCEASLKRLDVDYIDLYYQHRVDT 136
L K+++ATK + G K P VR E SLKRL +DL+Y H D
Sbjct: 61 LGRSGCKVKIATKAA----PMFG---KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDH 113
Query: 137 SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTR 190
PIEET+ +L +EGK +GLS + + T Q ++ TR
Sbjct: 114 GTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITR 173
Query: 191 DIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+E E+ P R G+ ++PL G G+
Sbjct: 174 QVETELFPCLRHFGLRFYAFNPLAGGLLTGR 204
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Length = 327 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 1e-64
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 12 KLGTQGLEVSKLGYGC-MNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
LG GL VS LG G + + +++E ++ A+ GI FDTA+VY E
Sbjct: 7 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 62
Query: 71 VLLGKALKQL--PREKIQVATK--FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
V+LG +K+ R + + TK +G G+ K ++ +ASL+RL ++Y+
Sbjct: 63 VVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYV 118
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITA 180
D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P
Sbjct: 119 DVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPIC 178
Query: 181 VQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q E+ ++ R+ +E ++ L ++G+G + +SPL G GK +P S
Sbjct: 179 EQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK-YDSGIPPYS 229
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Length = 353 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 2e-64
Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 17/232 (7%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN--A 68
+ G G+++ + G + + E+ ++++ AF GIT FD A+ YG +
Sbjct: 37 RRCGRSGVKLPAISLGLWH---NFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGS 93
Query: 69 NEVLLGKALKQLP---REKIQVATK-FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVD 124
E G+ L++ R+++ ++TK G G G+ Y+ + + SLKR+ ++
Sbjct: 94 AECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGD--WGSRKYLIASLDQSLKRMGLE 151
Query: 125 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-----HPIT 179
Y+D++Y HR D P++ET+ + LV GK Y+G+S R+A + P
Sbjct: 152 YVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCL 211
Query: 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q ++SL+ R +E+ ++ L +E G+G + +SPL G + + +P DS
Sbjct: 212 IHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDR-YLNGIPEDS 262
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Length = 367 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-62
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 12 KLGTQGLEVSKLGYGC-MNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
LG GL VS LG G + + +++E ++ A+ GI FDTA+VY E
Sbjct: 41 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 96
Query: 71 VLLGKALKQL--PREKIQVATK--FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
V+LG +K+ R + + TK +G G+ K ++ +ASL+RL ++Y+
Sbjct: 97 VVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYV 152
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITA 180
D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P
Sbjct: 153 DVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPIC 212
Query: 181 VQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q E+ ++ R+ +E ++ L ++G+G + +SPL G GK +P S
Sbjct: 213 EQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK-YDSGIPPYS 263
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 2e-62
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 18/232 (7%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN--AN 69
G GL + L G + G + E ++++ AF GIT FD A+ YG +
Sbjct: 17 YCGKSGLRLPALSLGLWHNFGHV---NALESQRAILRKAFDLGITHFDLANNYGPPPGSA 73
Query: 70 EVLLGKALKQ---LPREKIQVATK-FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
E G+ L++ R+++ ++TK G G G+ Y+ + + SLKR+ ++Y
Sbjct: 74 EENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGS--GGSRKYLLASLDQSLKRMGLEY 131
Query: 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-----HPITA 180
+D++Y HRVD + P+EET + V+ GK Y+G+S SP ++ + P+
Sbjct: 132 VDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLI 191
Query: 181 VQMEWSLWTRDIEE-EIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 231
Q ++L R +++ ++ + G+G + ++PL +G GK + +P DS
Sbjct: 192 HQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDS 242
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Length = 346 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 9e-56
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN-- 69
++ LEVS LG G M + SE D + + +A ++GI D A++Y
Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60
Query: 70 -----EVLLGKALKQL-PREKIQVATKFGIAGIGVAGV-IVKGAPDY----VRSCCEASL 118
E +G L + REK+ +A+K ++G ++ +R SL
Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASK--VSGPSRNNDKGIRPDQALDRKNIREALHDSL 118
Query: 119 KRLDVDYIDLYYQHRVD-----------------TSVPIEETIGEMKKLVEEGKIKYIGL 161
KRL DY+DLY H +V + +T+ + + GKI+YIG+
Sbjct: 119 KRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGV 178
Query: 162 S-EASPGTIR-----RAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 215
S E + G +R H + I +Q +SL R E + + + G+ ++ YS LG
Sbjct: 179 SNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGF 238
Query: 216 GFFGGKAVVENVPADS 231
G GK + PA +
Sbjct: 239 GTLTGKYLNGAKPAGA 254
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Length = 317 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-25
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+KL G+E+ +G G + S + I+ +K A G DTA VY
Sbjct: 4 ATASIKLSN-GVEMPVIGLGT------WQSS--PAEVITAVKTAVKAGYRLIDTASVYQ- 53
Query: 67 NANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
NE +G A+K+ + RE++ + TK + P + SLK+
Sbjct: 54 --NEEAIGTAIKELLEEGVVKREELFITTKAWTHELA---------PGKLEGGLRESLKK 102
Query: 121 LDVDYIDLYYQH---------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRR 171
L ++Y+DLY H + P+E+ + + + G K +G+S + I R
Sbjct: 103 LQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISR 162
Query: 172 --AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
A + P+ Q+E + + + + C++ I + Y+ LG
Sbjct: 163 ALALGLTPVHNSQVELHLYFPQ---HDHVDFCKKHNISVTSYATLGSP 207
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Length = 298 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-25
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADV 63
+ + G + LG+G +SG + + ++ A G DTA +
Sbjct: 19 YFQSMMHAVS-SNGANIPALGFGTFRMSG--------AEVLRILPQALKLGFRHVDTAQI 69
Query: 64 YGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRL 121
YG NE +G+A+++ +PR + + TK + D + + SL++L
Sbjct: 70 YG---NEAEVGEAIQKSGIPRADVFLTTKVWVDNYR---------HDAFIASVDESLRKL 117
Query: 122 DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT-A 180
D++DL H + VP+ E IG + ++ GK+++IG+S + + A + A
Sbjct: 118 RTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIA 177
Query: 181 V-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
Q+E+ + +++ R LG+ + Y + G
Sbjct: 178 TNQVEYHPYLDQ---TKVLQTARRLGMSLTSYYAMANG 212
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Length = 312 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 2e-24
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 52/247 (21%)
Query: 7 QVPRVKL--GTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
++P L + L++ +G G ++D I A +G FDTA Y
Sbjct: 5 EIPTKVLTNTSSQLKMPVVGMGS------APDFTCKKDTKDAIIEAIKQGYRHFDTAAAY 58
Query: 65 GQNANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118
G +E LG+ALK+ + R+ + V +K + P V + SL
Sbjct: 59 G---SEQALGEALKEAIELGLVTRDDLFVTSKLWVTENH---------PHLVIPALQKSL 106
Query: 119 KRLDVDYIDLYYQH----------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162
K L +DY+DLY H ++ M++ ++ G K IG+S
Sbjct: 107 KTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVS 166
Query: 163 EASPGTIRR--AHA-VHPITAV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217
S + + A V P AV Q+E + W + +++ C GI + +SP+ +G
Sbjct: 167 NFSVKKLENLLSVATVLP--AVNQVEMNLAWQQ---KKLREFCNAHGIVLTAFSPVRKGA 221
Query: 218 FGGKAVV 224
G V
Sbjct: 222 SRGPNEV 228
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Length = 326 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 2e-24
Identities = 53/248 (21%), Positives = 87/248 (35%), Gaps = 62/248 (25%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDG--ISMIKHAFSKGITFFDTAD 62
R+ L G + +G G YS P S G + +K A G D A
Sbjct: 4 SAASHRIPLSD-GNSIPIIGLGT------YSEPKSTPKGACATSVKVAIDTGYRHIDGAY 56
Query: 63 VYGQNANEVLLGKALKQL------PREKIQVATK----FGIAGIGVAGVIVKGAPDYVRS 112
+Y NE +G+A+++ RE I K P+ VR
Sbjct: 57 IYQ---NEHEVGEAIREKIAEGKVRREDIFYCGKLWATNH-------------VPEMVRP 100
Query: 113 CCEASLKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEE 153
E +L+ L +DY+DLY + + T M+ +
Sbjct: 101 TLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDA 160
Query: 154 GKIKYIGLSEASPGTIRR----AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIV 208
G +K +G+S + + H + Q+E +T + +++ C++ I I
Sbjct: 161 GLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFT---QPKLLKFCQQHDIVIT 217
Query: 209 PYSPLGRG 216
YSPLG
Sbjct: 218 AYSPLGTS 225
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Length = 344 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 2e-24
Identities = 61/249 (24%), Positives = 93/249 (37%), Gaps = 50/249 (20%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
+ + L + G + +G G + + + S+ G DT
Sbjct: 30 ATMGQGEQDHFVLKS-GHAMPAVGLGT------WRAG--SDTAHSVRTAITEAGYRHVDT 80
Query: 61 ADVYGQNANEVLLGKALKQ-----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115
A YG E +GK LK + R+ + V +K AP+ VR E
Sbjct: 81 AAEYG---VEKEVGKGLKAAMEAGIDRKDLFVTSKIWCT---------NLAPERVRPALE 128
Query: 116 ASLKRLDVDYIDLYYQH---------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 160
+LK L +DYIDLY+ H +E EM+ LV++G +K IG
Sbjct: 129 NTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIG 188
Query: 161 LSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217
+ + + R A P QME W ++I C++ GI I YSPLG
Sbjct: 189 VCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN---DKIFEACKKHGIHITAYSPLGS-- 243
Query: 218 FGGKAVVEN 226
K + +
Sbjct: 244 -SEKNLAHD 251
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Length = 331 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 1e-23
Identities = 55/244 (22%), Positives = 85/244 (34%), Gaps = 59/244 (24%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+ VKL G + LG+G V + + K A G D+A +Y
Sbjct: 4 KQQCVKLND-GHFMPVLGFGTYA-----PPEVPRSKALEVTKLAIEAGFRHIDSAHLYN- 56
Query: 67 NANEVLLGKALKQL------PREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEA 116
NE +G A++ RE I +K F P+ VR E
Sbjct: 57 --NEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFH-------------RPELVRPALEN 101
Query: 117 SLKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIK 157
SLK+ +DY+DLY H + V + T M+K + G K
Sbjct: 102 SLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAK 161
Query: 158 YIGLSEASPGTIRR----AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIVPYSP 212
IG+S + + + Q+E + R +++ C+ I +V YS
Sbjct: 162 SIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR---SKLLDFCKSKDIVLVAYSA 218
Query: 213 LGRG 216
LG
Sbjct: 219 LGSQ 222
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Length = 322 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 1e-22
Identities = 58/250 (23%), Positives = 91/250 (36%), Gaps = 66/250 (26%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+P +KL + G + +G+GC + + A G FD A+ YG
Sbjct: 4 SIPDIKLSS-GHLMPSIGFGC------WKLA--NATAGEQVYQAIKAGYRLFDGAEDYG- 53
Query: 67 NANEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEA 116
NE +G +K+ + RE+I + +K + P V +
Sbjct: 54 --NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYH-------------DPKNVETALNK 98
Query: 117 SLKRLDVDYIDLYYQH-------------------------RVDTSVPIEETIGEMKKLV 151
+L L VDY+DL+ H V VPI ET ++KLV
Sbjct: 99 TLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLV 158
Query: 152 EEGKIKYIGLSEASPGTIRR--AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIV 208
GKIK IG+S + A +Q+E + ++I ++ G+ I
Sbjct: 159 AAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ---PKLIEFAQKAGVTIT 215
Query: 209 PYSPLGRGFF 218
YS G F
Sbjct: 216 AYSSFGPQSF 225
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Length = 323 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 1e-22
Identities = 56/243 (23%), Positives = 91/243 (37%), Gaps = 61/243 (25%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSP-VSEEDGISMIKHAFSKGITFFDTADVYGQN 67
RV L G + LG+G V++++ I K A G FD+A +Y
Sbjct: 6 LRVALND-GNFIPVLGFGT------TVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE-- 56
Query: 68 ANEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEAS 117
E +G+A++ + RE I +K F P+ VR+C E +
Sbjct: 57 -VEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFH-------------RPELVRTCLEKT 102
Query: 118 LKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKY 158
LK +DY+DLY H + +V I +T M+K + G K
Sbjct: 103 LKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKS 162
Query: 159 IGLSEASPGTIRR----AHAVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIVPYSPL 213
IG+S + + R + Q+E + +++ C+ I +V Y L
Sbjct: 163 IGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ---SKMLDYCKSKDIILVSYCTL 219
Query: 214 GRG 216
G
Sbjct: 220 GSS 222
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 2e-22
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 62/242 (25%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
R+ L G ++ LG G + SP +K A G D A VY
Sbjct: 3 SRILLNN-GAKMPILGLGT------WKSP--PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 69 NEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEASL 118
NE +G A+++ + RE++ + +K + V+ C+ +L
Sbjct: 51 NENEVGVAIQEKLREQVVKREELFIVSKLWCTYH-------------EKGLVKGACQKTL 97
Query: 119 KRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYI 159
L +DY+DLY H V + I +T M++LV+EG +K I
Sbjct: 98 SDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAI 157
Query: 160 GLSEASPGTIRR--AHAVHPIT-AV-QME-WSLWTRDIEEEIIPLCRELGIGIVPYSPLG 214
G+S + + AV Q+E T+ E++I C+ GI + YSPLG
Sbjct: 158 GISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ---EKLIQYCQSKGIVVTAYSPLG 214
Query: 215 RG 216
Sbjct: 215 SP 216
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Length = 335 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 2e-22
Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 52/251 (20%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA + + KL T G + +G G + + + A G D
Sbjct: 21 MA---NAITFFKLNT-GAKFPSVGLGT------WQAS--PGLVGDAVAAAVKIGYRHIDC 68
Query: 61 ADVYGQNANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114
A +YG NE +G LK+ + RE + + +K P V
Sbjct: 69 AQIYG---NEKEIGAVLKKLFEDRVVKREDLFITSKLWCT---------DHDPQDVPEAL 116
Query: 115 EASLKRLDVDYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 160
+LK L ++Y+DLY H V I T M+ L + GK + IG
Sbjct: 117 NRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIG 176
Query: 161 LSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG- 216
+S S + A P Q+E W + ++ C+ G+ + YSPLG
Sbjct: 177 VSNFSTKKLADLLELARVPPAVNQVECHPSWRQ---TKLQEFCKSKGVHLSAYSPLGSPG 233
Query: 217 -FFGGKAVVEN 226
+ V++N
Sbjct: 234 TTWLKSDVLKN 244
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Length = 283 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 3e-22
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 36/218 (16%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+P V L + +G G +S+ + + A G DTA YG
Sbjct: 11 IPTVTL-NDDNTLPVVGIGV------G--ELSDSEAERSVSAALEAGYRLIDTAAAYG-- 59
Query: 68 ANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
NE +G+A+ +PR++I V TK G ++ ASL+RL +DY
Sbjct: 60 -NEAAVGRAIAASGIPRDEIYVTTKLATPDQG---------FTSSQAAARASLERLGLDY 109
Query: 126 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT-A 180
+DLY H V ++ G + K+ E+G + IG+ + ++ T A
Sbjct: 110 VDLYLIHWPGGDTSKYV---DSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPA 166
Query: 181 V-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E L + + + I Y PLG G
Sbjct: 167 VNQIELHPLLNQ---AALREVNAGYNIVTEAYGPLGVG 201
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Length = 298 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 3e-22
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
QVP+V L G+E+ LGYG + E + A G DTA Y
Sbjct: 14 QVPKVTLNN-GVEMPILGYGVFQ--------IPPEKTEECVYEAIKVGYRLIDTAASYM- 63
Query: 67 NANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR 120
NE +G+A+K+ + RE++ V TK ++ +G + + E SLK+
Sbjct: 64 --NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVG---------YESTKKAFEKSLKK 112
Query: 121 LDVDYIDLYYQHRVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPGTIRRAHAVHP 177
L ++YIDLY H+ P + M+++ ++G ++ IG+S P + H
Sbjct: 113 LQLEYIDLYLIHQ-----PFGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHE 167
Query: 178 IT-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
I AV Q+E + R +E I R I + P G
Sbjct: 168 IVPAVNQIEIHPFYQR---QEEIEFMRNYNIQPEAWGPFAEG 206
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} PDB: 3qkz_A* Length = 316 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 4e-22
Identities = 54/243 (22%), Positives = 91/243 (37%), Gaps = 62/243 (25%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
VKL T ++ +G G + SP +K A G FD A VY
Sbjct: 2 TTFVKLRT-KAKMPLVGLGT------WKSP--PGQVKEAVKAAIDAGYRHFDCAYVYQ-- 50
Query: 68 ANEVLLGKALKQ------LPREKIQVATK----FGIAGIGVAGVIVKGAPDYVRSCCEAS 117
NE +G+A+++ + RE + + +K F ++ + +
Sbjct: 51 -NESEVGEAIQEKIKEKAVRREDLFIVSKLWSTFF-------------EKSLMKEAFQKT 96
Query: 118 LKRLDVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKY 158
L L +DY+DLY H + + + M++LV++G +K
Sbjct: 97 LSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKA 156
Query: 159 IGLSEASPGTIRR--AHAVHPIT-AV-QME-WSLWTRDIEEEIIPLCRELGIGIVPYSPL 213
+G+S + I R Q+E T+ E++I C GI ++ YSPL
Sbjct: 157 LGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ---EKLIQYCHSKGIAVIAYSPL 213
Query: 214 GRG 216
G
Sbjct: 214 GSP 216
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Length = 334 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 4e-22
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 66/253 (26%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
M + G+ +LG+G + +P E + ++ A G D
Sbjct: 9 MGTLEA--QTQGPGS-MQYPPRLGFGT------WQAP--PEAVQTAVETALMTGYRHIDC 57
Query: 61 ADVYGQNANEVLLGKALKQ--------LPREKIQVATK----FGIAGIGVAGVIVKGAPD 108
A VY NE +G+A + + RE + + +K P+
Sbjct: 58 AYVYQ---NEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNH-------------RPE 101
Query: 109 YVRSCCEASLKRLDVDYIDLYYQH---------------------RVDTSVPIEETIGEM 147
VR C+ ++ L VDY+DL+ H + VP+ +T M
Sbjct: 102 LVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAM 161
Query: 148 KKLVEEGKIKYIGLSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELG 204
++LVEEG +K+IG+S + + +A Q+E + + C + G
Sbjct: 162 EQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN---DATVKFCLDNG 218
Query: 205 IGIVPYSPLGRGF 217
IG+ YSP+G +
Sbjct: 219 IGVTAYSPMGGSY 231
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Length = 283 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 7e-22
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
VP VKL G + +LGYG + +S ++ +S + A G DTA +YG
Sbjct: 25 TVPTVKL-NDGNHIPQLGYGV------W--QISNDEAVSAVSEALKAGYRHIDTATIYG- 74
Query: 67 NANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVD 124
NE +GKA+ + R I + TK + G + + SLK+L D
Sbjct: 75 --NEEGVGKAINGSGIARADIFLTTKLWNSDQG---------YESTLKAFDTSLKKLGTD 123
Query: 125 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT- 179
Y+DLY H D + ET KL EEG++K IG+S + R +T
Sbjct: 124 YVDLYLIHWPMPSKDLFM---ETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTP 180
Query: 180 AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ Q+E + + +E+ + I +SPLG+G
Sbjct: 181 VLNQIELHPQFQQ---DELRLFHGKHDIATEAWSPLGQG 216
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Length = 331 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 9e-22
Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 54/238 (22%)
Query: 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDT 60
MA + +L T G ++ +G G Y+ V+ I+ A G D
Sbjct: 21 MAA---PIRFFELNT-GAKLPCVGLGT------YAM-VATA-----IEQAIKIGYRHIDC 64
Query: 61 ADVYGQNANEVLLGKALKQL------PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114
A +YG NE +G LK+L RE++ + +K P+ V
Sbjct: 65 ASIYG---NEKEIGGVLKKLIGDGFVKREELFITSKLWSN---------DHLPEDVPKAL 112
Query: 115 EASLKRLDVDYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 160
E +L+ L +DY+DLY H + T I T M+ L + GK + IG
Sbjct: 113 EKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIG 172
Query: 161 LSEASPGTIRR--AHAVHPITAVQMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGR 215
+S S + A Q+E +W + + + LC+ G+ + YSPLG
Sbjct: 173 VSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ---QGLHELCKSKGVHLSGYSPLGS 227
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} Length = 288 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 9e-22
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
V L + G+++ + G G + SP + E + +K A G DTA +Y
Sbjct: 7 GVDKAMVTL-SNGVKMPQFGLGV------WQSP-AGEVTENAVKWALCAGYRHIDTAAIY 58
Query: 65 GQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
NE +G L+ +PRE + + TK G + + E S ++L
Sbjct: 59 K---NEESVGAGLRASGVPREDVFITTKLWNTEQG---------YESTLAAFEESRQKLG 106
Query: 123 VDYIDLYYQH----RVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175
VDYIDLY H + S ++ + ++L +E K++ IG+S + A+
Sbjct: 107 VDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAM 166
Query: 176 HPIT-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+T V Q+E L + ++ C I + +SPLG+G
Sbjct: 167 CTVTPMVNQVELHPLNNQ---ADLRAFCDAKQIKVEAWSPLGQG 207
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Length = 278 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 1e-21
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 36/218 (16%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
VP + L G + +LGYG + V D ++ A G DTA +YG
Sbjct: 3 VPSIVL-NDGNSIPQLGYGV------F--KVPPADTQRAVEEALEVGYRHIDTAAIYG-- 51
Query: 68 ANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDY 125
NE +G A+ + R+ + + TK D + SL +L +D
Sbjct: 52 -NEEGVGAAIAASGIARDDLFITTKLWNDRHD---------GDEPAAAIAESLAKLALDQ 101
Query: 126 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT-A 180
+DLY H D V +M +L G + IG+S + R A + A
Sbjct: 102 VDLYLVHWPTPAADNYV---HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPA 158
Query: 181 V-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E + + EI + I + PLG+G
Sbjct: 159 VNQIELHPAYQQ---REITDWAAAHDVKIESWGPLGQG 193
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Length = 281 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 4e-21
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 2 AEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTA 61
E +KL + G+ + LG+G + E + A G DTA
Sbjct: 3 PEFMALTQSLKL-SNGVMMPVLGFGM------WKLQDGNE-AETATMWAIKSGYRHIDTA 54
Query: 62 DVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119
+Y NE G+A+ +PRE++ V TK + G + S E S+K
Sbjct: 55 AIYK---NEESAGRAIASCGVPREELFVTTKLWNSDQG---------YESTLSAFEKSIK 102
Query: 120 RLDVDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPGTIRRAHAV 175
+L ++Y+DLY H P ++ + +KL + K++ IG+S I
Sbjct: 103 KLGLEYVDLYLIHW-----PGKDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKH 157
Query: 176 HPIT-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ V Q+E L + + + C+ I + +SPLG+G
Sbjct: 158 CKVAPMVNQIELHPLLNQ---KALCEYCKSKNIAVTAWSPLGQG 198
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Length = 296 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 5e-21
Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
+KL G + +LG G + S E+ I+ I+ A G DTA Y
Sbjct: 24 NPTVIKL-QDGNVMPQLGLGV------W--QASNEEVITAIQKALEVGYRSIDTAAAYK- 73
Query: 67 NANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVD 124
NE +GKALK + RE++ + TK R SLK+L +D
Sbjct: 74 --NEEGVGKALKNASVNREELFITTKLWNDDH-----------KRPREALLDSLKKLQLD 120
Query: 125 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT- 179
YIDLY H +D V E M +L +EG IK IG+ ++R +T
Sbjct: 121 YIDLYLMHWPVPAIDHYV---EAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTP 177
Query: 180 AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ Q+E L + ++ I +SPL +G
Sbjct: 178 VINQIELHPLMQQ---RQLHAWNATHKIQTESWSPLAQG 213
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Length = 290 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 8e-21
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
V L + + +LG G + + E + ++ A G DTA +Y
Sbjct: 10 NCNYNCVTL-HNSVRMPQLGLGV------WRAQDGAE-TANAVRWAIEAGYRHIDTAYIY 61
Query: 65 GQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
NE +G+ +++ +PRE++ V TK + G + + E S + L
Sbjct: 62 S---NERGVGQGIRESGVPREEVWVTTKVWNSDQG---------YEKTLAAFERSRELLG 109
Query: 123 VDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPGTIRRAHAVHPI 178
++YIDLY H P ++ + ++KL EE K++ IG+S P + I
Sbjct: 110 LEYIDLYLIHW-----PGKKKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKI 164
Query: 179 T-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E L+ + + C++ I I +SPLG G
Sbjct: 165 RPMVNQVELHPLFQQ---RTLREFCKQHNIAITAWSPLGSG 202
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Length = 276 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 2e-20
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 64
VKL G+E+ G G + E +K A G DTA +Y
Sbjct: 3 TSLKDTVKL-HNGVEMPWFGLGV------FKVENGNE-ATESVKAAIKNGYRSIDTAAIY 54
Query: 65 GQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLD 122
NE +G +K+ + RE++ + +K G + + E SL+RL
Sbjct: 55 K---NEEGVGIGIKESGVAREELFITSKVWNEDQG---------YETTLAAFEKSLERLQ 102
Query: 123 VDYIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPGTIRRAHAVHPI 178
+DY+DLY H P ++ + ++KL ++GKI+ IG+S + I
Sbjct: 103 LDYLDLYLIHW-----PGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEI 157
Query: 179 T-AV-QMEWS-LWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
V Q+E+ T+ +E+ C+ GI + +SPL +G
Sbjct: 158 KPMVNQVEFHPRLTQ---KELRDYCKGQGIQLEAWSPLMQG 195
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} Length = 324 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 2e-15
Identities = 49/238 (20%), Positives = 79/238 (33%), Gaps = 49/238 (20%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V L G + LG+G V + A G DTA Y
Sbjct: 6 QHCVXLND-GHLIPALGFGT-----YXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQ-- 57
Query: 68 ANEVLLGKALKQ------LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRL 121
E +G+A++ + RE + V TK P+ V E SL L
Sbjct: 58 -VEEEIGQAIQSXIXAGVVXREDLFVTTKLWCT---------CFRPELVXPALEXSLXXL 107
Query: 122 DVDYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162
+DY+DLY H + +V +T +++ + G + IG+S
Sbjct: 108 QLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVS 167
Query: 163 EASPGTIRR----AHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ + R + Q+E L+ + ++ C I +V Y LG
Sbjct: 168 NFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQ 223
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-05
Identities = 36/251 (14%), Positives = 79/251 (31%), Gaps = 86/251 (34%)
Query: 30 LSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVAT 89
LS ++ +S + S +T + + + L + LPRE +
Sbjct: 281 LSAATTTHISLDH--------HSMTLTPDEVKSLLLKY-----LDCRPQDLPREVLTTNP 327
Query: 90 KFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHR--------VDTSVPIE 141
++ I S++ + D ++H +++S+ +
Sbjct: 328 -RRLSIIA------------------ESIRD-GLATWD-NWKHVNCDKLTTIIESSLNVL 366
Query: 142 ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCR 201
E E +K+ + LS + A I + + +W I+ +++ +
Sbjct: 367 EP-AEYRKM-------FDRLS------VFPPSA--HIPTILLS-LIWFDVIKSDVMVVVN 409
Query: 202 ELGIGIVPYSPLGRGFFGG-----------KAVVENVPA------DSFLVQRR------E 238
+L YS + + K +EN A D + + +
Sbjct: 410 KL----HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 239 PGQEQEYLFSH 249
P +Y +SH
Sbjct: 466 PPYLDQYFYSH 476
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 273 | |||
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 100.0 | |
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 100.0 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 100.0 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 100.0 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 100.0 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 100.0 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 100.0 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 100.0 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 100.0 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 100.0 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 100.0 | |
| 4exb_A | 292 | Putative uncharacterized protein; aldo-keto reduct | 100.0 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 100.0 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 100.0 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 100.0 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 100.0 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 100.0 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 100.0 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 100.0 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 100.0 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 100.0 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 100.0 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 100.0 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 100.0 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 100.0 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 100.0 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 100.0 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 100.0 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 100.0 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 100.0 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 100.0 | |
| 3b3d_A | 314 | YTBE protein, putative morphine dehydrogenase; ald | 100.0 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 100.0 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 100.0 | |
| 4gac_A | 324 | Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldhe | 100.0 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 100.0 | |
| 3cf4_A | 807 | Acetyl-COA decarboxylase/synthase alpha subunit; m | 98.04 | |
| 2pgw_A | 384 | Muconate cycloisomerase; enolase superfamily, octa | 93.47 | |
| 2rdx_A | 379 | Mandelate racemase/muconate lactonizing enzyme, P; | 93.35 | |
| 1mdl_A | 359 | Mandelate racemase; isomerase, mandelate pathway, | 93.14 | |
| 2zad_A | 345 | Muconate cycloisomerase; muconate lactonizing enzy | 92.99 | |
| 2nql_A | 388 | AGR_PAT_674P, isomerase/lactonizing enzyme; enolas | 92.68 | |
| 1nu5_A | 370 | Chloromuconate cycloisomerase; enzyme, dehalogenat | 92.39 | |
| 2ovl_A | 371 | Putative racemase; structural genomics, PSI-2, pro | 92.38 | |
| 2qgy_A | 391 | Enolase from the environmental genome shotgun sequ | 92.27 | |
| 3ik4_A | 365 | Mandelate racemase/muconate lactonizing protein; s | 91.86 | |
| 3i4k_A | 383 | Muconate lactonizing enzyme; structural genomics, | 91.85 | |
| 2qde_A | 397 | Mandelate racemase/muconate lactonizing enzyme FA | 91.68 | |
| 1r0m_A | 375 | N-acylamino acid racemase; isomerase; 1.30A {Deino | 91.57 | |
| 2o56_A | 407 | Putative mandelate racemase; dehydratase, structur | 91.49 | |
| 2og9_A | 393 | Mandelate racemase/muconate lactonizing enzyme; NY | 91.48 | |
| 1tkk_A | 366 | Similar to chloromuconate cycloisomerase; epimeras | 91.3 | |
| 3r0u_A | 379 | Enzyme of enolase superfamily; structural genomics | 91.28 | |
| 3jva_A | 354 | Dipeptide epimerase; enolase superfamily, isomeras | 91.21 | |
| 3gd6_A | 391 | Muconate cycloisomerase; structural genomics, NYSG | 91.05 | |
| 3eez_A | 378 | Putative mandelate racemase/muconate lactonizing e | 90.83 | |
| 3bjs_A | 428 | Mandelate racemase/muconate lactonizing enzyme; en | 90.61 | |
| 2ps2_A | 371 | Putative mandelate racemase/muconate lactonizing e | 90.47 | |
| 2gl5_A | 410 | Putative dehydratase protein; structural genomics, | 90.38 | |
| 2pp0_A | 398 | L-talarate/galactarate dehydratase; enolase superf | 90.28 | |
| 2p8b_A | 369 | Mandelate racemase/muconate lactonizing enzyme fam | 90.1 | |
| 2zc8_A | 369 | N-acylamino acid racemase; octamer, TIM beta/alpha | 90.08 | |
| 2poz_A | 392 | Putative dehydratase; octamer, structural genomics | 89.64 | |
| 2qdd_A | 378 | Mandelate racemase/muconate lactonizing enzyme; en | 89.61 | |
| 3s5s_A | 389 | Mandelate racemase/muconate lactonizing enzyme FA | 89.27 | |
| 1sjd_A | 368 | N-acylamino acid racemase; lyase, isomerase; HET: | 89.0 | |
| 3mwc_A | 400 | Mandelate racemase/muconate lactonizing protein; e | 88.91 | |
| 3q45_A | 368 | Mandelate racemase/muconate lactonizing enzyme FA | 88.78 | |
| 3tj4_A | 372 | Mandelate racemase; enolase, dehydratase, enzyme f | 88.75 | |
| 3i6e_A | 385 | Muconate cycloisomerase I; structural genomics, NY | 88.74 | |
| 2ox4_A | 403 | Putative mandelate racemase; enolase, dehydratase, | 88.72 | |
| 3dg3_A | 367 | Muconate cycloisomerase; muconate lactonizing enzy | 88.42 | |
| 2qq6_A | 410 | Mandelate racemase/muconate lactonizing enzyme- li | 87.81 | |
| 4e8g_A | 391 | Enolase, mandelate racemase/muconate lactonizing e | 87.68 | |
| 1rvk_A | 382 | Isomerase/lactonizing enzyme; enolase superfamily, | 87.28 | |
| 3rr1_A | 405 | GALD, putative D-galactonate dehydratase; enolase, | 87.06 | |
| 4dwd_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 86.71 | |
| 3fv9_G | 386 | Mandelate racemase/muconate lactonizing enzyme; st | 86.63 | |
| 3ozy_A | 389 | Putative mandelate racemase; beta-alpha barrel, en | 86.47 | |
| 2hzg_A | 401 | Mandelate racemase/muconate lactonizing enzyme/EN | 85.62 | |
| 2hxt_A | 441 | L-fuconate dehydratase; enolase superfamily, D-ery | 85.59 | |
| 4dye_A | 398 | Isomerase; enolase family protein, EFI, enzym func | 85.58 | |
| 3u9i_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 85.39 | |
| 1tzz_A | 392 | Hypothetical protein L1841; structural genomics, m | 85.12 | |
| 2gdq_A | 382 | YITF; mandelate racemase/muconate lactonizing enzy | 84.35 | |
| 3ro6_B | 356 | Putative chloromuconate cycloisomerase; TIM barrel | 84.34 | |
| 3va8_A | 445 | Probable dehydratase; enolase, magnesium binding s | 83.52 | |
| 3my9_A | 377 | Muconate cycloisomerase; structural genomics, PSI- | 83.52 | |
| 3qld_A | 388 | Mandelate racemase/muconate lactonizing protein; s | 83.34 | |
| 3vdg_A | 445 | Probable glucarate dehydratase; enolase, magnesium | 82.75 | |
| 3toy_A | 383 | Mandelate racemase/muconate lactonizing enzyme FA | 82.43 | |
| 1wuf_A | 393 | Hypothetical protein LIN2664; structural genomics, | 82.3 | |
| 3sjn_A | 374 | Mandelate racemase/muconate lactonizing protein; e | 82.27 | |
| 3stp_A | 412 | Galactonate dehydratase, putative; PSI biology, st | 81.48 | |
| 3vc5_A | 441 | Mandelate racemase/muconate lactonizing protein; d | 81.0 | |
| 3fcp_A | 381 | L-Ala-D/L-Glu epimerase, A muconate lactonizing en | 80.55 | |
| 1kko_A | 413 | 3-methylaspartate ammonia-lyase; enolase superfami | 80.48 |
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-65 Score=452.45 Aligned_cols=266 Identities=64% Similarity=1.043 Sum_probs=226.2
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQ 86 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~ 86 (273)
|+||+||+||++||+||||||++|..|+...+.+++.++|++|+++|||+||||+.||. |.||+.+|++|++.+|+++|
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 89999999999999999999999877776668999999999999999999999999997 68999999999966899999
Q ss_pred EEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCH
Q 024050 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 166 (273)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~ 166 (273)
|+||++......+....+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||++
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999875422222344678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh------------
Q 024050 167 GTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV------------ 234 (273)
Q Consensus 167 ~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~------------ 234 (273)
++++++++..+++++|++||+++++.+.+++++|+++||+|++|+||++|+|+|+...+.++.++...
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHPRFVGENLEK 240 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC---------------------
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCCCCCCcchhhcccccchhhhhh
Confidence 99999999999999999999999987788999999999999999999999999862222222221111
Q ss_pred hccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 QRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.....+.+.++|.++|+|++|+||+|++++|.|.++++|
T Consensus 241 ~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g 279 (337)
T 3v0s_A 241 NKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPG 279 (337)
T ss_dssp ----CHHHHHHHHHTTSCHHHHHHHHHHTTCTTBCCCCC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEcC
Confidence 011124678999999999999999999999999999987
|
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-63 Score=439.02 Aligned_cols=264 Identities=28% Similarity=0.514 Sum_probs=228.2
Q ss_pred CCcccCCCCCcccCcceeccccCCCC--CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~--~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~ 85 (273)
|+||+||+||++||+||||||+++.. |+ ..+++++.++|++|+++|||+||||+.||.|.||+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 78999999999999999999999863 43 2478999999999999999999999999999999999999985589999
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~ 165 (273)
||+||++.... .+.+..+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~g~~~~-~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRKQ-GNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEEE-TTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 99999762211 11112457899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCC-CCCCchhhhh--cc-----
Q 024050 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLVQ--RR----- 237 (273)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~-~~~~~~~~~~--~~----- 237 (273)
+++++++++..+|+++|++||+++++.+.+++++|+++||+|++|+||++|+|++++... .++..+.... ++
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~~~r~~~~~~~~~~~ 238 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERF 238 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGGGSGGGSHHHH
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCcccccccccccchhH
Confidence 999999999989999999999999987778999999999999999999999999985332 2333222100 00
Q ss_pred -----CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 238 -----EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 238 -----~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..+.+.++|.++++|++|+||+|++++|.|+++++|
T Consensus 239 ~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g 279 (312)
T 1pyf_A 239 KENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPG 279 (312)
T ss_dssp HHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 123467899999999999999999999999999987
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-63 Score=445.94 Aligned_cols=267 Identities=26% Similarity=0.432 Sum_probs=230.9
Q ss_pred cccCCCcccCCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCC
Q 024050 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPR 82 (273)
Q Consensus 4 ~~~~m~~r~lg~sg~~vs~lglG~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r 82 (273)
.+|+|+||+||+||++||+||||||++++. |+. .+.+++.++|++|+++|||+||||+.||.|.||+.+|++|+. +|
T Consensus 15 ~~m~M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R 92 (348)
T 3n2t_A 15 SHMASDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-KP 92 (348)
T ss_dssp --CTTSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-SC
T ss_pred CCCCceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-CC
Confidence 467899999999999999999999999853 443 488999999999999999999999999999999999999995 89
Q ss_pred CCEEEEeccCcCCC-CCc---cccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE
Q 024050 83 EKIQVATKFGIAGI-GVA---GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY 158 (273)
Q Consensus 83 ~~~~i~tK~~~~~~-~~~---~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~ 158 (273)
+++||+||++.... ..+ ....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++||||+
T Consensus 93 ~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~ 172 (348)
T 3n2t_A 93 NKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRA 172 (348)
T ss_dssp CCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEE
T ss_pred CeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceE
Confidence 99999999965321 111 22345789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCC-CCCchhhhh--
Q 024050 159 IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVEN-VPADSFLVQ-- 235 (273)
Q Consensus 159 iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~-~~~~~~~~~-- 235 (273)
||||||++++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.... ++..+....
T Consensus 173 iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~ 252 (348)
T 3n2t_A 173 LGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDP 252 (348)
T ss_dssp EEEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCTTSGGGGCG
T ss_pred EecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCCcchhhccc
Confidence 99999999999999999999999999999999877899999999999999999999999999854432 232222111
Q ss_pred ccC----------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 RRE----------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 ~~~----------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+. .+.+.++|.++|+|++|+||+|++++ .|+++++|
T Consensus 253 ~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~-~v~~~I~g 299 (348)
T 3n2t_A 253 KFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQ-GPVIALWG 299 (348)
T ss_dssp GGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTT-TTEEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHC-CCcEEEeC
Confidence 111 13567899999999999999999999 88888775
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-63 Score=438.33 Aligned_cols=262 Identities=27% Similarity=0.409 Sum_probs=226.0
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
|.|.||+||+||++||+||||||.. +|...+.+++.++|++|+++|||+||||+.||+|.||+.+|++|++ .+|+
T Consensus 1 ~~m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 77 (327)
T 3eau_A 1 MLQFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 77 (327)
T ss_dssp CCCSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred CcchhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccC
Confidence 6799999999999999999999842 4445689999999999999999999999999999999999999987 5799
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~ 163 (273)
++||+||+++... .....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++||||+|||||
T Consensus 78 ~v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 155 (327)
T 3eau_A 78 SLVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 155 (327)
T ss_dssp GCEEEEEESBCCS--SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEEeecCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecC
Confidence 9999999864321 12234578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhc------CCceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh-
Q 024050 164 ASPGTIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ- 235 (273)
Q Consensus 164 ~~~~~l~~~~~~------~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~- 235 (273)
|++++++++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|++++... .|...+...
T Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~-~~~~~~~~~~ 234 (327)
T 3eau_A 156 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLK 234 (327)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTS-CCTTSGGGST
T ss_pred CCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccCC-CCCCcccccc
Confidence 999999888653 58999999999999873 467999999999999999999999999986543 232221110
Q ss_pred -------c----------cCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 -------R----------REPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 -------~----------~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+ ...+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g 289 (327)
T 3eau_A 235 GYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLG 289 (327)
T ss_dssp TCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEEC
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeC
Confidence 0 0124567899999999999999999999999998887
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-62 Score=436.70 Aligned_cols=264 Identities=30% Similarity=0.479 Sum_probs=228.4
Q ss_pred CCcccCCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~ 85 (273)
|+||+||+||++||+||||||+++.. || ..+++++.++|++|+++|||+||||+.||.|.||+.+|++|++ .+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 78999999999999999999999863 55 3588999999999999999999999999999999999999986 379999
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~ 165 (273)
+|+||++...+. +.+..+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~~~~~~~-~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 999999721110 1111246899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCC-CCCCchhhhh--ccCc---
Q 024050 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLVQ--RREP--- 239 (273)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~-~~~~~~~~~~--~~~~--- 239 (273)
+++++++++..+++++|++||+++++.+.+++++|+++||+|++|+||++|+|++++... .+++.+.... .+..
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~ 238 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRF 238 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCCCCTTCGGGSCGGGSTTTH
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCccccccCCCccccccccccchhhH
Confidence 999999999999999999999999987788999999999999999999999999985432 2222221110 1111
Q ss_pred -------hhHHHHHHhcCC-ChHHHHHHhhhcCCCcccccCC
Q 024050 240 -------GQEQEYLFSHRE-PCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 -------~~~~~~~~~~~~-~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.++|.++|+ |++|+||+|++++|.|+++++|
T Consensus 239 ~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g 280 (333)
T 1pz1_A 239 KEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWG 280 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 456789999999 9999999999999999988876
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-62 Score=435.30 Aligned_cols=268 Identities=25% Similarity=0.441 Sum_probs=223.6
Q ss_pred Cccccc--CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC--CcHHHHHHHH
Q 024050 1 MAEEKH--QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKA 76 (273)
Q Consensus 1 m~~~~~--~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g~se~~lg~~ 76 (273)
|++.+. .|+||+||+||++||.||||||.. +|...+.+++.++|++|+++|||+||||+.||+ |.||+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 444444 499999999999999999999853 344557899999999999999999999999997 8999999999
Q ss_pred Hhc--C-CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc
Q 024050 77 LKQ--L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE 153 (273)
Q Consensus 77 l~~--~-~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~ 153 (273)
|++ . .|+++||+||++..... +......+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWP-GPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSS-STTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 986 3 49999999998754321 1111234799999999999999999999999999999999999999999999999
Q ss_pred CCccEEecCCCCHHHHHHHhhc-----CCceEEeeecccccccccc-cHHHHHHHhCCeEEecccCCCccCCCCCCCCCC
Q 024050 154 GKIKYIGLSEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEE-EIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV 227 (273)
Q Consensus 154 G~ir~iGvS~~~~~~l~~~~~~-----~~~~~~q~~~~l~~~~~~~-~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~ 227 (273)
||||+||||||++++++++++. .+++++|++||++++..+. +++++|+++||+|++|+||++|+|++++..+ .
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~-~ 238 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-I 238 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC----
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCccCC-C
Confidence 9999999999999999987654 5789999999999998765 8999999999999999999999999985432 2
Q ss_pred CCchhhh----------hccC-------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 228 PADSFLV----------QRRE-------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 228 ~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
|.+.+.. .... .+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 239 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g 301 (346)
T 3n6q_A 239 PQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIG 301 (346)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEEC
T ss_pred CCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcC
Confidence 2221110 0000 12567899999999999999999999999999887
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-61 Score=433.55 Aligned_cols=262 Identities=25% Similarity=0.454 Sum_probs=222.3
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC--CcHHHHHHHHHhc-C--C
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKALKQ-L--P 81 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g~se~~lg~~l~~-~--~ 81 (273)
.|+||+||+||++||+||||||.. +|...+.+++.++|++|++.|||+||||+.||+ |.||+.+|++|++ . .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 109 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW 109 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG
T ss_pred cceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC
Confidence 499999999999999999999932 333468999999999999999999999999998 9999999999985 3 3
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
|+++||+||++..... +......+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++||||+|||
T Consensus 110 R~~v~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGv 188 (353)
T 3erp_A 110 RDELIISTKAGYTMWD-GPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGI 188 (353)
T ss_dssp GGGCEEEEEESSCCSS-STTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCeEEEEeeeccCCCC-CcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 9999999999754211 111123479999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhc-----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh--
Q 024050 162 SEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV-- 234 (273)
Q Consensus 162 S~~~~~~l~~~~~~-----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~-- 234 (273)
|||++++++++++. .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..+ .|.+.+..
T Consensus 189 Sn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~~-~p~~~r~~~~ 267 (353)
T 3erp_A 189 SNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNG-IPEDSRAASG 267 (353)
T ss_dssp ESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC------------
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccCC-CCCccccccc
Confidence 99999999988764 68999999999999987788999999999999999999999999985433 33322211
Q ss_pred -----hccC-------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 -----QRRE-------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 -----~~~~-------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.... .+.+.++|.++++|++|+||+|++++|.|+++++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G 318 (353)
T 3erp_A 268 SRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIG 318 (353)
T ss_dssp --------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEeC
Confidence 0000 12577899999999999999999999999999887
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-61 Score=432.94 Aligned_cols=260 Identities=28% Similarity=0.420 Sum_probs=224.0
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
.| ||+||+||++||+||||||.. +|...+.+++.++|++|+++|||+||||+.||.|.||+.+|++|++ .+|++
T Consensus 37 ~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 112 (367)
T 3lut_A 37 QF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSS 112 (367)
T ss_dssp CS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred hc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCce
Confidence 48 999999999999999999842 3445688999999999999999999999999999999999999987 57999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||+||+++... .....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++||||+||||||
T Consensus 113 v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 190 (367)
T 3lut_A 113 LVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRW 190 (367)
T ss_dssp CEEEEEESBCCS--SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeccccCCC--CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCC
Confidence 999999865431 122345789999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhc------CCceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh---
Q 024050 165 SPGTIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV--- 234 (273)
Q Consensus 165 ~~~~l~~~~~~------~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~--- 234 (273)
+++++++++.. .+|+++|++||+++++. +.+++++|+++||+|++|+||++|+|+|++.... |...+..
T Consensus 191 ~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~~~-~~~~r~~~~~ 269 (367)
T 3lut_A 191 SSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI-PPYSRASLKG 269 (367)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC-CTTSGGGSTT
T ss_pred CHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCCCC-CCcccccccc
Confidence 99999887653 58999999999999975 4589999999999999999999999999865332 2221110
Q ss_pred -----hcc----------CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 -----QRR----------EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 -----~~~----------~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+. ..+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g 323 (367)
T 3lut_A 270 YQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLG 323 (367)
T ss_dssp CHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEEC
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecC
Confidence 000 123567899999999999999999999999998887
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-61 Score=425.58 Aligned_cols=257 Identities=31% Similarity=0.535 Sum_probs=213.3
Q ss_pred cccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCC
Q 024050 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPRE 83 (273)
Q Consensus 4 ~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~ 83 (273)
....|+||+||++|++||+||||||+++. +.+++.++|++|++.|||+||||+.||.|.||+.+|++|+. +|+
T Consensus 17 ~~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~ 89 (317)
T 1ynp_A 17 RGSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQ 89 (317)
T ss_dssp ---CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGG
T ss_pred ccCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCC
Confidence 34569999999999999999999999864 56899999999999999999999999999999999999995 899
Q ss_pred CEEEEeccCcCCCCC-ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 84 KIQVATKFGIAGIGV-AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~-~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++||+||++...... ..+..+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++||||+||||
T Consensus 90 ~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 169 (317)
T 1ynp_A 90 DIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGIS 169 (317)
T ss_dssp GCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred eEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEec
Confidence 999999997643211 0112356899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh--ccCch
Q 024050 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ--RREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~--~~~~~ 240 (273)
||++++++++++..+++++|++||++++..+. ++++|+++||+|++|+||++|+|+++ .++ +...+... ....+
T Consensus 170 n~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~-~~~--~~~~~~~~~~~~~~~ 245 (317)
T 1ynp_A 170 SIRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR-PLP--EGEGYLNYRYDELKL 245 (317)
T ss_dssp CCCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS-CCC--TTCCBTTBCHHHHHH
T ss_pred CCCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC-CCc--cccccccccHHHHHH
Confidence 99999999999988899999999999998654 99999999999999999999999986 211 00000000 00012
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.+++. |+|++|+||+|++++|.|.++++|
T Consensus 246 ~l~~ia~--g~s~aqvaL~w~l~~~~v~~vI~g 276 (317)
T 1ynp_A 246 LRESLPT--DRPLHELALQYCLAHDVVATVAAG 276 (317)
T ss_dssp HHHHSCS--SSCHHHHHHHHHHTSTTEEEEECC
T ss_pred HHHHHHc--CCCHHHHHHHHHHhCCCCeEEEeC
Confidence 3455555 899999999999999999999887
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-60 Score=423.00 Aligned_cols=262 Identities=27% Similarity=0.365 Sum_probs=220.5
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCC-------CCcHHHHHHHHHhc-
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg-------~g~se~~lg~~l~~- 79 (273)
|+||+||++|++||+||||||+||. ..+.+++.++|++|+++|||+||||+.|| .|.||+.+|++|++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998763 34789999999999999999999999996 68999999999986
Q ss_pred CCCCCEEEEeccCcCCCCCccc---cccCCHHHHHHHHHHHHHHcCCCcccEEEecCCC---------------C--CCC
Q 024050 80 LPREKIQVATKFGIAGIGVAGV---IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVD---------------T--SVP 139 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~---~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~---------------~--~~~ 139 (273)
.+|+++||+||++........+ ..+.+++.+++++++||+|||+||||+|++|||+ . ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 4799999999997531100001 1246899999999999999999999999999993 3 457
Q ss_pred HHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc------CCceEEeeecccccccccccHHHHHHHhCCeEEecccC
Q 024050 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl 213 (273)
++++|++|++|+++||||+||||||++++++++++. .+++++|++||++++..+.+++++|+++||+|++|+||
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL 236 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecch
Confidence 899999999999999999999999999888776542 47999999999999987788999999999999999999
Q ss_pred CCccCCCCCCCCCCCCchhhhh-----ccC-------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 214 GRGFFGGKAVVENVPADSFLVQ-----RRE-------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 214 ~~G~L~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++|+|++++.....|.+.+... +.. .+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 237 ~~G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g 308 (346)
T 1lqa_A 237 GFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLG 308 (346)
T ss_dssp GGGGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEEC
T ss_pred hhhhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeC
Confidence 9999999854433443332110 011 12567899999999999999999999999998887
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-59 Score=414.88 Aligned_cols=252 Identities=24% Similarity=0.285 Sum_probs=221.5
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~ 85 (273)
|++++||+++++||+||||||++|. | ..+++++.++|++|+++|||+||||+.||.|.||+.+|++|++ .+|+++
T Consensus 23 M~~~~Lg~~~~~vs~lglGt~~~g~-~--~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 99 (319)
T 1ur3_M 23 VQRITIAPQGPEFSRFVMGYWRLMD-W--NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 99 (319)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-T--TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CceEECCCCCcccccccEeccccCC-C--CCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeE
Confidence 8999999999999999999999986 4 3478999999999999999999999999999999999999986 469999
Q ss_pred EEEeccCcCCCCC---ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 86 QVATKFGIAGIGV---AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 86 ~i~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
||+||++...+.. .....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++||||+||||
T Consensus 100 ~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 179 (319)
T 1ur3_M 100 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 179 (319)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred EEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEec
Confidence 9999998643210 0112357899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 163 EASPGTIRRAHAVH--PITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 163 ~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
||++++++++.+.. +++++|++||++++.. +.+++++|+++||++++|+||++|.|.+. +.. ....
T Consensus 180 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~------~~~-----~~~~ 248 (319)
T 1ur3_M 180 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND------DYF-----QPLR 248 (319)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC------GGG-----HHHH
T ss_pred CCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCC------chh-----HHHH
Confidence 99999999988764 7899999999999985 47799999999999999999999988641 110 0113
Q ss_pred hhHHHHHHhcCCCh-HHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHREPC-QKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~~~~-~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.++|.++++++ +|+||+|++++|.+.++++|
T Consensus 249 ~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G 283 (319)
T 1ur3_M 249 DELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIG 283 (319)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEEC
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeC
Confidence 45778999999999 99999999999999999887
|
| >4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-59 Score=409.08 Aligned_cols=238 Identities=24% Similarity=0.299 Sum_probs=204.2
Q ss_pred CcccccCCCcccCCCCCcccCcceeccccCCCC--------CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHH
Q 024050 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGG--------YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72 (273)
Q Consensus 1 m~~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~--------~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~ 72 (273)
|+.-...|+||+||++|++||+||||||+++.. |+. .+++++.++|++|++.|||+||||+.|| .||+.
T Consensus 23 ~~~~~~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~ 99 (292)
T 4exb_A 23 MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEER 99 (292)
T ss_dssp CCCSCSTTCCEECTTSSCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHH
T ss_pred ccCCCCCceeeecCCCCCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHH
Confidence 443445699999999999999999999999862 332 5889999999999999999999999998 79999
Q ss_pred HHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCC--CCCCCHH-HHHHHHHH
Q 024050 73 LGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRV--DTSVPIE-ETIGEMKK 149 (273)
Q Consensus 73 lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~--~~~~~~~-~~~~~L~~ 149 (273)
+|++|+. +|+++||+||++..... +....+.+++.+++++++||+|||+||||+|++|+| +...+.+ ++|++|++
T Consensus 100 lG~al~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~ 177 (292)
T 4exb_A 100 LGPLLRG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAA 177 (292)
T ss_dssp HHHHHTT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHH
T ss_pred HHHHhcc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHH
Confidence 9999995 89999999999864321 122345789999999999999999999999999999 4434455 89999999
Q ss_pred HHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCC
Q 024050 150 LVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPA 229 (273)
Q Consensus 150 l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~ 229 (273)
|+++||||+||||||++++++++++. ++++|++||+++++. .+++++|+++||+|++|+||++|+|+++
T Consensus 178 l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~-------- 246 (292)
T 4exb_A 178 LKREGLIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLG-------- 246 (292)
T ss_dssp HHHTTSEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC--------------
T ss_pred HHHCCCceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCC--------
Confidence 99999999999999999999999887 899999999999976 6899999999999999999999988642
Q ss_pred chhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 230 DSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++++++|+||+|++++|.|.++++|
T Consensus 247 -------------------~g~t~aqvaL~w~l~~~~v~~vI~g 271 (292)
T 4exb_A 247 -------------------AGQDPVRASFELVFDQPGVAAAIVG 271 (292)
T ss_dssp ---------------------CCHHHHHHHHHHHSTTCCEEEEC
T ss_pred -------------------CCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 6789999999999999999999887
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-57 Score=393.47 Aligned_cols=228 Identities=27% Similarity=0.377 Sum_probs=204.7
Q ss_pred ccccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--C
Q 024050 3 EEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--L 80 (273)
Q Consensus 3 ~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~ 80 (273)
.+.|+|++++| ++|++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++ .
T Consensus 21 ~~~~~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~ 88 (283)
T 3o0k_A 21 SMIMTVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGI 88 (283)
T ss_dssp CEECCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSS
T ss_pred cccCCCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCC
Confidence 34578999999 8999999999999975 578999999999999999999999999 69999999986 4
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEE
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYI 159 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~i 159 (273)
+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++||||+|
T Consensus 89 ~R~~~~i~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~i 159 (283)
T 3o0k_A 89 ARADIFLTTKLWNSD---------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSI 159 (283)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred CcccEEEEEccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceE
Confidence 799999999997643 468999999999999999999999999999876 4678999999999999999999
Q ss_pred ecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhcc
Q 024050 160 GLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRR 237 (273)
Q Consensus 160 GvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~ 237 (273)
|||||++++++++++. .++.++|++||++.++ .+++++|+++||++++|+||++|.|..
T Consensus 160 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~----------------- 220 (283)
T 3o0k_A 160 GVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLE----------------- 220 (283)
T ss_dssp EEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTT-----------------
T ss_pred EeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCcccc-----------------
Confidence 9999999999998875 4678999999999885 679999999999999999999997653
Q ss_pred CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 238 EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 238 ~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 221 -~~~l~~ia~~~g~t~aqvaL~w~l~~~~v--~I~g 253 (283)
T 3o0k_A 221 -DPTLKSIAEKHAKSVAQIILRWHIETGNI--VIPK 253 (283)
T ss_dssp -CHHHHHHHHHHTSCHHHHHHHHHHHHTCE--ECCC
T ss_pred -chHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEeC
Confidence 13477899999999999999999999987 4555
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=388.31 Aligned_cols=225 Identities=24% Similarity=0.345 Sum_probs=202.8
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
+.|+|++|| +|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 4 ~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 72 (276)
T 3f7j_A 4 SLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVARE 72 (276)
T ss_dssp STTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGG
T ss_pred CCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcc
Confidence 348999996 9999999999999864 468999999999999999999999998 79999999986 5899
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~ 163 (273)
++||+||+++.. .+++.+++++++||+|||+||||+|++|||+... ..++|++|++|+++||||+|||||
T Consensus 73 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn 142 (276)
T 3f7j_A 73 ELFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSN 142 (276)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEES
T ss_pred cEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEecc
Confidence 999999997543 5689999999999999999999999999998754 899999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchh
Q 024050 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQ 241 (273)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~ 241 (273)
|++++++++++. .++.++|++||++.++ .+++++|+++||++++|+||++|.|... +.
T Consensus 143 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------~~ 202 (276)
T 3f7j_A 143 FQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN------------------EV 202 (276)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC------------------HH
T ss_pred CCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCC------------------HH
Confidence 999999998876 4678999999999875 6899999999999999999999986531 24
Q ss_pred HHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 242 EQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 242 ~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 203 l~~ia~~~g~t~aqval~w~l~~~~v--~i~g 232 (276)
T 3f7j_A 203 LTQIAEKHNKSVAQVILRWDLQHGVV--TIPK 232 (276)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCE--EeeC
Confidence 67899999999999999999999987 4544
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-57 Score=392.89 Aligned_cols=224 Identities=24% Similarity=0.429 Sum_probs=205.2
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
.|+|++|| |++||.||||||++ +.+++.++|++|++.|||+||||+.|| ||+.+|++|++ .+|++
T Consensus 23 ~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 89 (298)
T 3up8_A 23 MMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRAD 89 (298)
T ss_dssp SCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGG
T ss_pred cCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHH
Confidence 48999998 99999999999975 468999999999999999999999999 89999999987 58999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||+||+++.. .+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||
T Consensus 90 v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 160 (298)
T 3up8_A 90 VFLTTKVWVDN---------YRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNF 160 (298)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCC
Confidence 99999997533 579999999999999999999999999999998899999999999999999999999999
Q ss_pred CHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 165 SPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 165 ~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
++++++++++.. +++++|++||++.++ .+++++|+++||++++|+||++|.|.. .+.+
T Consensus 161 ~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~------------------~~~l 220 (298)
T 3up8_A 161 NTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGKVPA------------------DPLL 220 (298)
T ss_dssp CHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGHHHH------------------CHHH
T ss_pred CHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCcccc------------------cchH
Confidence 999999998774 799999999999885 689999999999999999999997542 1346
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|.++++|++|+||+|++++|.|+ +++|
T Consensus 221 ~~ia~~~g~s~aqvaL~w~l~~p~v~-~I~g 250 (298)
T 3up8_A 221 TEIGGRHGKTAAQVALRWLVQQQDVI-VLSK 250 (298)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTSTTEE-EEEC
T ss_pred HHHHHHcCCCHHHHHHHHHHHCCCcE-EEEC
Confidence 78999999999999999999999986 5665
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-56 Score=386.55 Aligned_cols=227 Identities=22% Similarity=0.287 Sum_probs=198.2
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
|+|++++| ++|++||.||||||+++ .+++.++|++|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 1 m~M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~ 68 (278)
T 1hw6_A 1 MTVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARD 68 (278)
T ss_dssp -CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGG
T ss_pred CCCceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChh
Confidence 67999999 99999999999999753 47899999999999999999999998 79999999985 5899
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-CCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++||+||+++.. .+++.+++++++||+|||+||||+|++|||+. ..+..++|++|++|+++||||+||||
T Consensus 69 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 139 (278)
T 1hw6_A 69 DLFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVS 139 (278)
T ss_dssp GCEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEec
Confidence 999999997532 46888999999999999999999999999987 46789999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCch
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
||++++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++|. ++. ...+
T Consensus 140 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~--~~~--------------~~~~ 201 (278)
T 1hw6_A 140 NHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK--YDL--------------FGAE 201 (278)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS--SCC--------------TTSH
T ss_pred CCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC--ccc--------------cccH
Confidence 9999999998876 4669999999999986 679999999999999999999984 110 0123
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.++|.++++|++|+||+|+++++ | ++++|
T Consensus 202 ~l~~ia~~~g~s~aqvaL~w~l~~~-v-~~I~g 232 (278)
T 1hw6_A 202 PVTAAAAAHGKTPAQAVLRWHLQKG-F-VVFPK 232 (278)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTT-C-BBCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEcC
Confidence 5778999999999999999999996 4 57766
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-56 Score=387.62 Aligned_cols=231 Identities=23% Similarity=0.319 Sum_probs=200.7
Q ss_pred ccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCC
Q 024050 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPR 82 (273)
Q Consensus 5 ~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r 82 (273)
..+|+|++| ++|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| ||+.+|++++. .+|
T Consensus 10 ~~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r 78 (290)
T 4gie_A 10 NCNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPR 78 (290)
T ss_dssp SSSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCG
T ss_pred CCCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcc
Confidence 447999999 99999999999999764 568899999999999999999999998 89999999987 789
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++++|+||++... .+++.+.+++++||+|||+||||+|++|||+. .+..++|++|++|+++||||+||||
T Consensus 79 ~~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvS 148 (290)
T 4gie_A 79 EEVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVS 148 (290)
T ss_dssp GGSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeec
Confidence 9999999987654 46899999999999999999999999999976 5788999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
||++++++++.+...+..+|++|++..+..+.+++++|+++||++++|+||++|.|++... ...+
T Consensus 149 n~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~---------------~~~l 213 (290)
T 4gie_A 149 NFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGSGEEAGILK---------------NHVL 213 (290)
T ss_dssp SCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCSSGGGCGGG---------------CHHH
T ss_pred CCCHHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeecccccccccccch---------------hHHH
Confidence 9999999999887544334444444444445789999999999999999999999876321 2346
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|.++|+|++|+||+|++++|.| +++|
T Consensus 214 ~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G 242 (290)
T 4gie_A 214 GEIAKKHNKSPAQVVIRWDIQHGIV--TIPK 242 (290)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHHhCCCHHHHHHHHHHhCCCE--EEEC
Confidence 7899999999999999999999987 4554
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-56 Score=394.94 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=208.2
Q ss_pred ccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCC
Q 024050 19 EVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGI 96 (273)
Q Consensus 19 ~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~ 96 (273)
.+|+||||||++|. ..+.+++.++|++|+++|||+||||+.||.|.||+.+|++|+. ..|+++||+||+++..+
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~ 79 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFG 79 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTT
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCC
Confidence 46899999999875 2478999999999999999999999999999999999999985 24788999999964321
Q ss_pred CCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc-
Q 024050 97 GVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV- 175 (273)
Q Consensus 97 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~- 175 (273)
.+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++||||+||||||++++++++++.
T Consensus 80 ------~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 80 ------KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp ------CCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 1467999999999999999999999999999999889999999999999999999999999999999887654
Q ss_pred -----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCC---CCchhh---------hhcc-
Q 024050 176 -----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV---PADSFL---------VQRR- 237 (273)
Q Consensus 176 -----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~---~~~~~~---------~~~~- 237 (273)
.+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..... +...+. ..++
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYW 233 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHHHHHHC
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcccCCCccccCCCccccccccchhhhhccc
Confidence 5789999999999998778899999999999999999999999997432110 000000 0000
Q ss_pred ------CchhHHHHHHh----cCCChHHHHHHhhhcCCCc-----ccccCC
Q 024050 238 ------EPGQEQEYLFS----HREPCQKVQLHFCSTSPSM-----GSRTGG 273 (273)
Q Consensus 238 ------~~~~~~~~~~~----~~~~~~q~aL~~~l~~p~v-----~s~~~g 273 (273)
..+.+.++|.+ +|+|++|+||+|++++|.| .++++|
T Consensus 234 ~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g 284 (327)
T 1gve_A 234 KEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILG 284 (327)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEEC
T ss_pred ChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEEC
Confidence 12356788999 9999999999999999999 677776
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-56 Score=392.25 Aligned_cols=239 Identities=25% Similarity=0.318 Sum_probs=206.6
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
++|++++| ++|++||.||||||+++. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 73 (323)
T 1afs_A 3 SISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGT 73 (323)
T ss_dssp GGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCC
Confidence 67899999 799999999999998752 3678999999999999999999999998 79999999986
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~ 144 (323)
T 1afs_A 74 VKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDI 144 (323)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCH
T ss_pred CChHHeEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCH
Confidence 4799999999997532 45788999999999999999999999999942 2367
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
+++|++|++|+++||||+||||||++++++++++.. +|+++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 222 (323)
T 1afs_A 145 CDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSS 222 (323)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCC
Confidence 899999999999999999999999999999998863 669999999999875 67999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|++ +.....| .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 223 ~l~~-~~~~~~~--~~----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g 270 (323)
T 1afs_A 223 RDKT-WVDQKSP--VL----LDDPVLCAIAKKYKQTPALVALRYQLQRG-V-VPLIR 270 (323)
T ss_dssp CCTT-TSCTTSC--CG----GGCHHHHHHHHHTTCCHHHHHHHHHHHTT-C-EEEEC
T ss_pred cccc-ccccCCc--ch----hcCHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEeeC
Confidence 9875 2211111 01 12456789999999999999999999998 3 56655
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-56 Score=391.50 Aligned_cols=239 Identities=22% Similarity=0.311 Sum_probs=205.6
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
++|++++| +||++||.||||||+++ ..+.+++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 4 ~~m~~~~L-~tg~~v~~lglGt~~~~-----~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~ 74 (324)
T 3ln3_A 4 SXQHCVXL-NDGHLIPALGFGTYXPX-----EVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGV 74 (324)
T ss_dssp --CCEEEC-TTSCEEESSEEECCCCT-----TSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEC-CCCCCcCCeeecCCccc-----CCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCC
Confidence 57999999 99999999999999865 24789999999999999999999999998 79999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 75 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (324)
T 3ln3_A 75 VXREDLFVTTKLWCTC---------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDF 145 (324)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred cccceeEEEeeeCCcc---------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCH
Confidence 4899999999997543 56999999999999999999999999999975 3468
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
+++|++|++|+++||||+||||||++++++++++.. ++.++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 146 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~g 223 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQ--RXLLDYCESXDIVLVAYGALGTQ 223 (324)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccch--HHHHHHHHHcCCEEEEecCCCCC
Confidence 899999999999999999999999999999998863 377999999999874 78999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.. +.....|. ....+.+.++|.++|+|++|+||+|++++|.+ +++|
T Consensus 224 ~~~~-~~~~~~~~------~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~~--~I~g 271 (324)
T 3ln3_A 224 RYXE-WVDQNSPV------LLNDPVLCDVAXXNXRSPALIALRYLIQRGIV--PLAQ 271 (324)
T ss_dssp CCTT-TSCTTSCC------GGGCHHHHHHHHHHTSCHHHHHHHHHHHTTCE--EEEC
T ss_pred Cccc-ccccCCcc------hhcCHHHHHHHHhhCCCHHHHHHHHHHhCCCE--EEeC
Confidence 7642 11111110 11134678999999999999999999999963 5554
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-55 Score=381.23 Aligned_cols=224 Identities=23% Similarity=0.335 Sum_probs=201.4
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
.|++++| ++|++||.||||||+++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 8 ~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~ 76 (281)
T 1vbj_A 8 LTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPREE 76 (281)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGGG
T ss_pred CCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChhH
Confidence 5999999 89999999999999864 458899999999999999999999998 79999999985 57999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||+||+++. +.+++.+++++++||+|||+||||+|++|||+ ..+..++|++|++|+++||||+||||||
T Consensus 77 ~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn~ 146 (281)
T 1vbj_A 77 LFVTTKLWNS---------DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSNF 146 (281)
T ss_dssp CEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEESC
T ss_pred EEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeCC
Confidence 9999999753 25689999999999999999999999999998 6778999999999999999999999999
Q ss_pred CHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 165 SPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 165 ~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
++++++++++. .+++++|++||+++++ .+++++|+++||++++|+||++|.+.. .+.+
T Consensus 147 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~------------------~~~l 206 (281)
T 1vbj_A 147 HEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVE------------------DARL 206 (281)
T ss_dssp CHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTT------------------CHHH
T ss_pred CHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCC------------------CHHH
Confidence 99999999886 4569999999999886 579999999999999999999984321 1346
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|.++|++++|+||+|+++++. ++++|
T Consensus 207 ~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g 235 (281)
T 1vbj_A 207 KAIGGKYGKTAAQVMLRWEIQAGV--ITIPK 235 (281)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHTTC--EECCB
T ss_pred HHHHHHhCCCHHHHHHHHHHHCCC--EEecC
Confidence 789999999999999999999963 46665
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=384.04 Aligned_cols=225 Identities=23% Similarity=0.304 Sum_probs=200.6
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
++++.+| ++|++||.||||||+++. .+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 9 ~~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~ 77 (288)
T 4f40_A 9 DKAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPRED 77 (288)
T ss_dssp TTCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGG
T ss_pred cCCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhh
Confidence 4677899 899999999999998763 48899999999999999999999998 89999999986 58999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-------CCHHHHHHHHHHHHHcCCcc
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIK 157 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-------~~~~~~~~~L~~l~~~G~ir 157 (273)
+||+||+++.. .+++.+++++++||+|||+||||+|++|+|+.. .+..++|++|++|+++||||
T Consensus 78 ~~I~TK~~~~~---------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 148 (288)
T 4f40_A 78 VFITTKLWNTE---------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVR 148 (288)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEE
T ss_pred EEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCcc
Confidence 99999997543 568999999999999999999999999999863 56789999999999999999
Q ss_pred EEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh
Q 024050 158 YIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ 235 (273)
Q Consensus 158 ~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~ 235 (273)
+||||||++++++++++. .+++++|++||+++++ .+++++|+++||++++|+||++|.|.+
T Consensus 149 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~--------------- 211 (288)
T 4f40_A 149 AIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLS--------------- 211 (288)
T ss_dssp EEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGG---------------
T ss_pred EEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCcccc---------------
Confidence 999999999999999886 4689999999999986 679999999999999999999998764
Q ss_pred ccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 RREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.+.++|.++++|++|+||+|++++| .++++|
T Consensus 212 ---~~~l~~ia~~~g~t~aqvaL~w~l~~~--~~~i~g 244 (288)
T 4f40_A 212 ---NPILSAIGAKYNKTAAQVILRWNIQKN--LITIPK 244 (288)
T ss_dssp ---CHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCB
T ss_pred ---cHHHHHHHHHhCCCHHHHHHHHHHhCC--CeEeeC
Confidence 124678999999999999999999999 345554
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=382.94 Aligned_cols=226 Identities=23% Similarity=0.349 Sum_probs=200.6
Q ss_pred ccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCC
Q 024050 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPR 82 (273)
Q Consensus 5 ~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r 82 (273)
...|++++| ++|++||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 8 ~~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R 75 (283)
T 2wzm_A 8 AAAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPR 75 (283)
T ss_dssp --CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCG
T ss_pred CCCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCc
Confidence 346999999 99999999999999753 48899999999999999999999998 79999999985 579
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEEec
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
+++||+||++.. +.+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++||||+|||
T Consensus 76 ~~v~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGv 146 (283)
T 2wzm_A 76 DEIYVTTKLATP---------DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGV 146 (283)
T ss_dssp GGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred ccEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEE
Confidence 999999999753 2568999999999999999999999999999874 457899999999999999999999
Q ss_pred CCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 162 SEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 162 S~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
|||++++++++++. .+|+++|++||+++++ .+++++|+++||+|++|+||++|.+.. .
T Consensus 147 Sn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~------------------~ 206 (283)
T 2wzm_A 147 CNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLD------------------H 206 (283)
T ss_dssp ESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGG------------------C
T ss_pred cCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccc------------------h
Confidence 99999999999876 4569999999999986 579999999999999999999985421 1
Q ss_pred hhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.++|.++|++++|+||+|++++|. ++++|
T Consensus 207 ~~l~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g 238 (283)
T 2wzm_A 207 PAVTAIAEAHGRTAAQVLLRWSIQLGN--VVISR 238 (283)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHTTC--EEEEC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHCCC--EEEeC
Confidence 346789999999999999999999974 55654
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-55 Score=387.50 Aligned_cols=240 Identities=21% Similarity=0.284 Sum_probs=206.9
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
.+|++++| ++|++||.||||||++++ ..+.+++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 5 ~~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 76 (326)
T 3buv_A 5 AASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGK 76 (326)
T ss_dssp SSCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCC
Confidence 45899999 899999999999998763 23678999999999999999999999998 79999999986
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 77 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (326)
T 3buv_A 77 VRREDIFYCGKLWATN---------HVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNL 147 (326)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred CChhHeEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccH
Confidence 4799999999997532 56899999999999999999999999999964 2367
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--C--ceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--P--ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~--~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
.++|++|++|+++||||+||||||++++++++++.. + |+++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 225 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTS 225 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998863 4 77999999999875 67999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|+ ++.....| .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 226 ~l~-~~~~~~~~--~~----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 273 (326)
T 3buv_A 226 RNP-IWVNVSSP--PL----LKDALLNSLGKRYNKTAAQIVLRFNIQRG-V-VVIPK 273 (326)
T ss_dssp CCT-TTSCTTSC--CG----GGCHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred ccc-cccccCCc--cc----cccHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeC
Confidence 987 43211111 11 12356789999999999999999999998 3 56665
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-55 Score=388.45 Aligned_cols=240 Identities=24% Similarity=0.362 Sum_probs=203.8
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
|++++| ++|++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 5 ~~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~ 72 (317)
T 1qwk_A 5 TASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVK 72 (317)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCC
T ss_pred cceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCC
Confidence 478999 7999999999999863 688999999999999999999999998 79999999986 48
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC---------CCCHHHHHHHHHHHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------SVPIEETIGEMKKLVE 152 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------~~~~~~~~~~L~~l~~ 152 (273)
|+++||+||+++.. .+++.+++++++||+|||+||||+|++|||+. ..+.+++|++|++|++
T Consensus 73 R~~~~i~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~ 143 (317)
T 1qwk_A 73 REELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYK 143 (317)
T ss_dssp GGGCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHH
T ss_pred hhheEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHH
Confidence 99999999997532 45788999999999999999999999999975 3478999999999999
Q ss_pred cCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCC-CCC
Q 024050 153 EGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVEN-VPA 229 (273)
Q Consensus 153 ~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~-~~~ 229 (273)
+||||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|+ ++.... .+.
T Consensus 144 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~~~~~ 220 (317)
T 1qwk_A 144 AGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV-NFTLPTGQKL 220 (317)
T ss_dssp TTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE-CCBCTTCCBC
T ss_pred cCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc-cccccccccc
Confidence 99999999999999999999886 3579999999999875 67999999999999999999999876 322111 010
Q ss_pred chhhhh-ccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 230 DSFLVQ-RREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 230 ~~~~~~-~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+... ....+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 221 ~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g 263 (317)
T 1qwk_A 221 DWAPAPSDLQDQNVLALAEKTHKTPAQVLLRYALDRG-C-AILPK 263 (317)
T ss_dssp CCEECSSGGGCHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EEECC
T ss_pred cccccchhhccHHHHHHHHHHCcCHHHHHHHHHHhCC-C-eEEeC
Confidence 000000 011356789999999999999999999998 3 66665
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-55 Score=388.54 Aligned_cols=239 Identities=25% Similarity=0.315 Sum_probs=204.0
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
|++++++| ++|++||.||||||.++. .+.+++.++|++|++.|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~ 73 (331)
T 1s1p_A 3 SKQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGS 73 (331)
T ss_dssp ---CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCC
Confidence 67889999 899999999999998642 3678999999999999999999999998 79999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~ 144 (331)
T 1s1p_A 74 VKREDIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDL 144 (331)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCH
T ss_pred CCchheEEEeccCCcc---------CCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCH
Confidence 4899999999997532 56899999999999999999999999999953 2367
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
.++|++|++|+++||||+||||||++++++++++.. +|+++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 222 (331)
T 1s1p_A 145 CTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQ 222 (331)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998863 679999999999875 67999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|++ +.....| .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 223 ~l~~-~~~~~~~--~~----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g 270 (331)
T 1s1p_A 223 RDKR-WVDPNSP--VL----LEDPVLCALAKKHKRTPALIALRYQLQRG-V-VVLAK 270 (331)
T ss_dssp CCTT-TSCTTSC--CG----GGCHHHHHHHHHHTSCHHHHHHHHHHHTT-C-EEEEE
T ss_pred cccc-cccCCCc--cc----ccCHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEeeC
Confidence 9875 2211111 11 11356789999999999999999999998 3 55554
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-55 Score=386.61 Aligned_cols=233 Identities=25% Similarity=0.364 Sum_probs=202.8
Q ss_pred CCCccc-CCC-CCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-----
Q 024050 7 QVPRVK-LGT-QGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----- 79 (273)
Q Consensus 7 ~m~~r~-lg~-sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~----- 79 (273)
+|++++ ||+ ||++||.|||||+.++. +.+++.++|++|++.|||+||||+.|| ||+.+|++|++
T Consensus 5 ~m~~~~~l~~~tg~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~g 75 (312)
T 1zgd_A 5 EIPTKVLTNTSSQLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIELG 75 (312)
T ss_dssp CCCEEECTTSTTCCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTT
T ss_pred CCchhhhcCCCCCCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcC
Confidence 489999 988 79999999999965432 457899999999999999999999998 89999999985
Q ss_pred -CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC----------------CCCHHH
Q 024050 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT----------------SVPIEE 142 (273)
Q Consensus 80 -~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~----------------~~~~~~ 142 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.++
T Consensus 76 ~~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e 146 (312)
T 1zgd_A 76 LVTRDDLFVTSKLWVTE---------NHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKG 146 (312)
T ss_dssp SCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHH
T ss_pred CCcchheEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHH
Confidence 3799999999997532 56889999999999999999999999999963 246889
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
+|++|++|+++||||+||||||++++++++++.. +|+++|++||+++++ .+++++|+++||+|++|+||++|.+.+
T Consensus 147 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~ 224 (312)
T 1zgd_A 147 VWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGASRG 224 (312)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTTTTS
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 9999999999999999999999999999998874 789999999999985 679999999999999999999887543
Q ss_pred CCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 221 KAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. .. ....+.+.++|.++|+|++|+||+|+++++ + ++++|
T Consensus 225 ~---~~---------~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 263 (312)
T 1zgd_A 225 P---NE---------VMENDMLKEIADAHGKSVAQISLRWLYEQG-V-TFVPK 263 (312)
T ss_dssp S---CT---------TTTCHHHHHHHHHHTSCHHHHHHHHHHHTT-C-EECCC
T ss_pred C---cc---------ccccHHHHHHHHHcCCCHHHHHHHHHHHCC-C-EEEeC
Confidence 1 00 011346789999999999999999999996 3 56665
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-54 Score=385.98 Aligned_cols=235 Identities=23% Similarity=0.291 Sum_probs=201.2
Q ss_pred ccccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc---
Q 024050 3 EEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--- 79 (273)
Q Consensus 3 ~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--- 79 (273)
++.|+|++++|+ +|++||.||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 20 ~~~~~m~~~~L~-tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~ 87 (335)
T 3h7u_A 20 HMANAITFFKLN-TGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFE 87 (335)
T ss_dssp ----CCCEEECT-TSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHH
T ss_pred hhccCCceEEcC-CCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHh
Confidence 345689999995 999999999999963 678999999999999999999999999 89999999985
Q ss_pred ---CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--------------CCCHHH
Q 024050 80 ---LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------SVPIEE 142 (273)
Q Consensus 80 ---~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~~~~~~ 142 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.++
T Consensus 88 ~g~~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e 158 (335)
T 3h7u_A 88 DRVVKREDLFITSKLWCTD---------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPS 158 (335)
T ss_dssp TTSCCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHH
T ss_pred cCCCCcceeEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHH
Confidence 3899999999997533 56889999999999999999999999999964 246899
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
+|++|++|+++||||+||||||++++++++++. .+++++|++||++.++ .+++++|+++||+|++|+||++|.+.-
T Consensus 159 ~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~~ 236 (335)
T 3h7u_A 159 TWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTTW 236 (335)
T ss_dssp HHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCTT
T ss_pred HHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCCC
Confidence 999999999999999999999999999998876 4679999999999986 679999999999999999999763221
Q ss_pred CCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 221 KAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.. .. ....+.+.++|.++|+|++|+||+|++++| .++++|
T Consensus 237 --~~-----~~----~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g 276 (335)
T 3h7u_A 237 --LK-----SD----VLKNPILNMVAEKLGKSPAQVALRWGLQMG--HSVLPK 276 (335)
T ss_dssp --SC-----CC----GGGCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCB
T ss_pred --CC-----cc----ccccHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeC
Confidence 00 01 011345789999999999999999999998 456655
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-54 Score=383.41 Aligned_cols=237 Identities=26% Similarity=0.386 Sum_probs=202.0
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
.+|++++| ++|++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 45899999 8999999999999863 689999999999999999999999998 79999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-----------------------
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT----------------------- 136 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~----------------------- 136 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNNY---------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 4899999999997532 56899999999999999999999999999952
Q ss_pred --CCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 137 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 137 --~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
..+++++|++|++|+++||||+||||||++++++++++. .+++++|++||++.++ .+++++|+++||+|++|+|
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 219 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSS 219 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECC
Confidence 236789999999999999999999999999999999876 4689999999999875 6799999999999999999
Q ss_pred CCCccCCCCCCC-C-CCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 213 LGRGFFGGKAVV-E-NVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 213 l~~G~L~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
|++|.+...... . ..|. ....+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 220 L~~G~~~~~~~~~~~~~~~------~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~-~-~vI~g 274 (322)
T 1mi3_A 220 FGPQSFVEMNQGRALNTPT------LFAHDTIKAIAAKYNKTPAEVLLRWAAQRG-I-AVIPK 274 (322)
T ss_dssp TTTHHHHTTTCHHHHTSCC------TTSCHHHHHHHHHHTCCHHHHHHHHHHTTT-C-EECCC
T ss_pred CCCCCcccccccccccCcc------cccCHHHHHHHHHcCCCHHHHHHHHHHhCC-C-EEEcC
Confidence 999943211000 0 0000 112356789999999999999999999998 3 67765
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-54 Score=379.21 Aligned_cols=233 Identities=24% Similarity=0.335 Sum_probs=199.6
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
|++.+| +||++||.||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~ 69 (316)
T 3o3r_A 2 TTFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVR 69 (316)
T ss_dssp CCEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCC
Confidence 456788 8999999999999864 467899999999999999999999998 79999999985 58
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCC-------------------CCCCHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVD-------------------TSVPIEE 142 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~-------------------~~~~~~~ 142 (273)
|+++||+||+++.. .+++.+++++++||+|||+||||+|++|||+ ...++++
T Consensus 70 R~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 3o3r_A 70 REDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hHHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHH
Confidence 99999999997543 4689999999999999999999999999996 3467899
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+|++|++|+++||||+||||||++++++++++.. +++++|++||++.++ .+++++|+++||+|++|+||++|..
T Consensus 141 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~ 218 (316)
T 3o3r_A 141 AWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ--EKLIQYCHSKGIAVIAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHTTTCEEEEECTTCCTTC
T ss_pred HHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccch--HHHHHHHHHcCCEEEEecccCCCCC
Confidence 9999999999999999999999999999998753 489999999999874 7899999999999999999999832
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. +.. +... .....+.+.++|.++|+|++|+||+|++++|.+ +++|
T Consensus 219 ~--~~~---~~~~---~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~~--vi~g 263 (316)
T 3o3r_A 219 P--YAK---PEDP---VVLEIPKIKEIAAKHKKTIAQVLIRFHVQRNVA--VIPK 263 (316)
T ss_dssp T--TCC---TTSC---CSTTCHHHHHHHHHHTCCHHHHHHHHHHTTTCE--ECCB
T ss_pred c--ccc---ccch---hhhcCHHHHHHHHHhCCCHHHHHHHHHHhCCCE--EeCC
Confidence 1 111 1000 011235678999999999999999999999853 5554
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-54 Score=377.49 Aligned_cols=233 Identities=25% Similarity=0.356 Sum_probs=201.2
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
+++++| ++|++||.||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~ 69 (316)
T 1us0_A 2 ASRILL-NNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (316)
T ss_dssp CSEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CceEEC-CCCCEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCC
Confidence 357889 8999999999999862 689999999999999999999999998 79999999985 47
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEE 142 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~ 142 (273)
|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++++
T Consensus 70 R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 1us0_A 70 REELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hhHeEEEEeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHH
Confidence 99999999997532 56899999999999999999999999999963 236789
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+|++|++|+++||||+||||||++++++++++.. +|+++|++||++.++ .+++++|+++||+|++|+||++|.|
T Consensus 141 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCcc
Confidence 9999999999999999999999999999998863 569999999999875 6799999999999999999999987
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. +.....|. ....+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 219 ~--~~~~~~~~------~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 263 (316)
T 1us0_A 219 P--WAKPEDPS------LLEDPRIKAIAAKHNKTTAQVLIRFPMQRN-L-VVIPK 263 (316)
T ss_dssp T--TCCTTSCC------TTTCHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred c--cccCCCcc------cccCHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEeC
Confidence 3 11111010 112356789999999999999999999998 3 66665
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-54 Score=375.47 Aligned_cols=225 Identities=26% Similarity=0.286 Sum_probs=199.2
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
+.|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 23 ~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~ 90 (296)
T 1mzr_A 23 ANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNRE 90 (296)
T ss_dssp CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGG
T ss_pred CCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcc
Confidence 46999999 7999999999999975 368999999999999999999999998 79999999985 5799
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-CCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++||+||++... . +.+++++++||+|||+||||+|++|||+. ..+..++|++|++|+++||||+||||
T Consensus 91 ~v~I~TK~~~~~---------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 159 (296)
T 1mzr_A 91 ELFITTKLWNDD---------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVC 159 (296)
T ss_dssp GCEEEEEECGGG---------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCCc---------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEe
Confidence 999999997532 2 67999999999999999999999999987 47789999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCch
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
||++++++++++. .++.++|++||+++++ .+++++|+++||++++|+||++|.+. . ...+
T Consensus 160 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~-------~---------l~~~ 221 (296)
T 1mzr_A 160 NFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKG-------V---------FDQK 221 (296)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTT-------T---------TTSH
T ss_pred CCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCcch-------h---------cChH
Confidence 9999999998865 5678999999999986 57999999999999999999999531 0 0123
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.++|.++|++++|+||+|+++++ + ++++|
T Consensus 222 ~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~g 252 (296)
T 1mzr_A 222 VIRDLADKYGKTPAQIVIRWHLDSG-L-VVIPK 252 (296)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeC
Confidence 5778999999999999999999996 3 46665
|
| >3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-53 Score=376.11 Aligned_cols=224 Identities=23% Similarity=0.359 Sum_probs=199.6
Q ss_pred CcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCC
Q 024050 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (273)
Q Consensus 9 ~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r 82 (273)
.+++| ++|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|++++. .+|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 35778 89999999999999865 468899999999999999999999998 89999998874 689
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
+++++.||++... .+++.+++++++||+|||+||||+|++|+|+. .+..++|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNAD---------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCCC---------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 9999999987544 57999999999999999999999999999976 5678999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
||++++++++.+..++.++|++|++..+..+.+++++|+++||++++|+||++|.|+++. ..
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~------------------~~ 241 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHP------------------VL 241 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTCH------------------HH
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCch------------------hh
Confidence 999999999998877777777777777766788999999999999999999999998631 23
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+++.++++|++|+||+|++++|.| +++|
T Consensus 242 ~~ia~~~g~t~aqvaL~w~l~~~~v--~I~G 270 (314)
T 3b3d_A 242 ADIAQTYNKSVAQIILRWDLQHGII--TIPK 270 (314)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHHcCCCHHHHHHHHHHhCCCE--EEEC
Confidence 5789999999999999999999987 4554
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-54 Score=379.91 Aligned_cols=230 Identities=24% Similarity=0.315 Sum_probs=197.6
Q ss_pred cccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc----
Q 024050 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ---- 79 (273)
Q Consensus 4 ~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~---- 79 (273)
+.|.|++++| ++|++||+||||||+ ++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 21 ~~~~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~ 84 (331)
T 3h7r_A 21 MAAPIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGD 84 (331)
T ss_dssp ----CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHT
T ss_pred cccCCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhc
Confidence 3457999999 799999999999984 578999999999999999999999 89999999985
Q ss_pred --CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--------------CCCHHHH
Q 024050 80 --LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------SVPIEET 143 (273)
Q Consensus 80 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~~~~~~~ 143 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.+++
T Consensus 85 g~~~R~~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~ 155 (331)
T 3h7r_A 85 GFVKREELFITSKLWSND---------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITST 155 (331)
T ss_dssp TSSCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHH
T ss_pred CCCCchhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHH
Confidence 3899999999997533 56889999999999999999999999999964 3568999
Q ss_pred HHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
|++|++|+++||||+||||||++++++++++. .+++++|++||++.++ .+++++|+++||+|++|+||++|-..
T Consensus 156 ~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g~~~-- 231 (331)
T 3h7r_A 156 WKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQSKG-- 231 (331)
T ss_dssp HHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCSCTT--
T ss_pred HHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCCCCC--
Confidence 99999999999999999999999999998876 4689999999999886 68999999999999999999976211
Q ss_pred CCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 222 AVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..... ....+.+.++|.+++++++|+||+|++++| .++++|
T Consensus 232 -----~~~~~----~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g 272 (331)
T 3h7r_A 232 -----EVRLK----VLQNPIVTEVAEKLGKTTAQVALRWGLQTG--HSVLPK 272 (331)
T ss_dssp -----TTTHH----HHTCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCC
T ss_pred -----CCccc----hhcCHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeC
Confidence 00111 122456789999999999999999999998 456665
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=371.47 Aligned_cols=223 Identities=23% Similarity=0.309 Sum_probs=197.5
Q ss_pred CcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCC
Q 024050 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (273)
Q Consensus 9 ~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r 82 (273)
+.+.+|++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 83 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRR 83 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCCh
Confidence 3578899999999999999975 358899999999999999999999998 79999999984 379
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
+++||+||+++. +.+++.+++++++||+|||+||||+|++|||+. +..++|++|++|+++||||+||||
T Consensus 84 ~~v~I~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvS 152 (298)
T 1vp5_A 84 EELFVTTKLWVS---------DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVS 152 (298)
T ss_dssp GGCEEEEEECGG---------GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhEEEEeccCCC---------CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEec
Confidence 999999999753 256899999999999999999999999999986 789999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCch
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
||++++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++|. ++ ....+
T Consensus 153 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~--~~--------------~l~~~ 214 (298)
T 1vp5_A 153 NFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGR--KN--------------IFQNG 214 (298)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGG--GG--------------GGGCH
T ss_pred CCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccCC--cc--------------ccCcH
Confidence 9999999999886 4569999999999986 579999999999999999999984 10 00123
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.++|.++|+|++|+||+|++++|. ++++|
T Consensus 215 ~l~~ia~~~g~s~aqvaL~w~l~~~v--~vI~g 245 (298)
T 1vp5_A 215 VLRSIAEKYGKTVAQVILRWLTQKGI--VAIPK 245 (298)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTTC--EECCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCC--EEEeC
Confidence 57789999999999999999999974 56665
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-53 Score=376.42 Aligned_cols=237 Identities=24% Similarity=0.358 Sum_probs=193.7
Q ss_pred CCCcccCC-CCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHh-------
Q 024050 7 QVPRVKLG-TQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALK------- 78 (273)
Q Consensus 7 ~m~~r~lg-~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~------- 78 (273)
|++.+++| .||.+||.||||||++ +.+++.++|++|++.|||+||||+.|| ||+.+|++|+
T Consensus 11 ~~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~ 79 (334)
T 3krb_A 11 TLEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDAS 79 (334)
T ss_dssp ----------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTT
T ss_pred ceecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhcc
Confidence 44555554 5699999999999873 689999999999999999999999999 8999999998
Q ss_pred -cCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--------------C------
Q 024050 79 -QLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------S------ 137 (273)
Q Consensus 79 -~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~------ 137 (273)
..+|+++||+||++... .+++.+++++++||+|||+||||+|++|+|+. +
T Consensus 80 ~g~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~ 150 (334)
T 3krb_A 80 SGIKREDVWITSKLWNYN---------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLE 150 (334)
T ss_dssp SSCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBC
T ss_pred CCCChhhEEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCccccccccccc
Confidence 34899999999997543 56889999999999999999999999999943 1
Q ss_pred -CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCC
Q 024050 138 -VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 138 -~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~ 214 (273)
.+++++|++|++|+++||||+||||||++++++++++.. +++++|++||++.++ .+++++|+++||++++|+||+
T Consensus 151 ~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ayspL~ 228 (334)
T 3krb_A 151 KVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYSPMG 228 (334)
T ss_dssp CCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC
T ss_pred CCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEecCC
Confidence 468899999999999999999999999999999998874 789999999999885 789999999999999999999
Q ss_pred CccCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHH-----HhhhcCCCcccccCC
Q 024050 215 RGFFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQL-----HFCSTSPSMGSRTGG 273 (273)
Q Consensus 215 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL-----~~~l~~p~v~s~~~g 273 (273)
+|+|++++....... .....+.+.++|.++|+|++|+|| +|+++ . .++++|
T Consensus 229 ~G~L~~~~~~~~~~~-----~~~~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~g 284 (334)
T 3krb_A 229 GSYADPRDPSGTQKN-----VILECKTLKAIADAKGTSPHCVALAWHVKKWNTS-M--YSVIPK 284 (334)
T ss_dssp CSBC-------CCBC-----GGGGCHHHHHHHHHHTSCHHHHHHHHHHHHSCST-T--EEECCB
T ss_pred CCcccCCCCCCCccc-----chhccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeC
Confidence 999998743221100 111245678999999999999999 77777 2 556654
|
| >4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-52 Score=372.14 Aligned_cols=234 Identities=27% Similarity=0.375 Sum_probs=203.0
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-------
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------- 79 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------- 79 (273)
|.+++.| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| ||+.+|++|++
T Consensus 1 t~~~v~L-ntG~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~ 68 (324)
T 4gac_A 1 TASSVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKA 68 (324)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSS
T ss_pred CCCeEEC-CCCCEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhcccce
Confidence 3567788 9999999999999863 689999999999999999999999998 89999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
..|+++++.+|++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 69 ~~r~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (324)
T 4gac_A 69 VPREELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHY 139 (324)
T ss_dssp BCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCH
T ss_pred ecccccccccccCCCC---------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCH
Confidence 4688999999986543 56899999999999999999999999999963 3568
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+++|++|++|+++||||+||||||++++++++... ..+.++|++|+++..+ .+++++|+++||++++|+||++|.+
T Consensus 140 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~gi~~~a~spL~~g~~ 217 (324)
T 4gac_A 140 KETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQ--NELIAHCHARGLEVTAYSPLGSSDR 217 (324)
T ss_dssp HHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCGGG
T ss_pred HHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhH--HHHHHHHHHhceeeeecCCcccCcc
Confidence 99999999999999999999999999999998876 4568899999988764 6799999999999999999999999
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++++..... ......+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 218 ~~~~~~~~~--------~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G 262 (324)
T 4gac_A 218 AWRHPDEPV--------LLEEPVVLALAEKHGRSPAQILLRWQVQRKVI--CIPK 262 (324)
T ss_dssp GGGSTTSCC--------GGGCHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred ccCCCCCcc--------hhhHHHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEEC
Confidence 987433211 01123577899999999999999999999976 4554
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-53 Score=375.84 Aligned_cols=226 Identities=27% Similarity=0.381 Sum_probs=196.0
Q ss_pred cCCC-cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc----
Q 024050 6 HQVP-RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ---- 79 (273)
Q Consensus 6 ~~m~-~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~---- 79 (273)
|+|+ +++| ++|++||.||||||+. + +++.++|+.|++ .|||+||||+.|| +|+.+|++|++
T Consensus 34 ~~m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~ 100 (344)
T 2bgs_A 34 QGEQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEA 100 (344)
T ss_dssp ---CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHT
T ss_pred ccCCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhc
Confidence 4464 7889 7999999999999862 5 889999999999 9999999999998 79999999986
Q ss_pred -CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC---------------CCCHHHH
Q 024050 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------------SVPIEET 143 (273)
Q Consensus 80 -~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------------~~~~~~~ 143 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+..++
T Consensus 101 g~~R~~v~I~TK~~~~~---------~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~ 171 (344)
T 2bgs_A 101 GIDRKDLFVTSKIWCTN---------LAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGV 171 (344)
T ss_dssp TCCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHH
T ss_pred CCCcccEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHH
Confidence 4899999999997532 56899999999999999999999999999963 2367899
Q ss_pred HHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
|++|++|+++||||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++| +
T Consensus 172 ~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G---~- 245 (344)
T 2bgs_A 172 WKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSS---E- 245 (344)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTT---T-
T ss_pred HHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCC---C-
Confidence 99999999999999999999999999999876 4579999999999875 67999999999999999999988 1
Q ss_pred CCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 222 AVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+ .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 246 --~-~~---------~~~~~l~~iA~~~g~s~aqvaL~w~l~~~-~-~vI~g 283 (344)
T 2bgs_A 246 --K-NL---------AHDPVVEKVANKLNKTPGQVLIKWALQRG-T-SVIPK 283 (344)
T ss_dssp --T-CC---------TTCHHHHHHHHHHTCCHHHHHHHHHHHHT-C-EECCB
T ss_pred --c-hh---------hccHHHHHHHHHhCCCHHHHHHHHHHhCC-C-eEEEC
Confidence 0 00 11345779999999999999999999998 3 56665
|
| >3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} | Back alignment and structure |
|---|
Probab=98.04 E-value=3e-06 Score=82.34 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=74.3
Q ss_pred HHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE--ecCCCCH---H----------------HHHHH
Q 024050 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI--GLSEASP---G----------------TIRRA 172 (273)
Q Consensus 114 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i--GvS~~~~---~----------------~l~~~ 172 (273)
++.+|.+|++||+|++ +|..+.. ..++++++++++..+|+|+++ |+|++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5567888999999995 6644332 235788999999999999999 4443322 1 24445
Q ss_pred hhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCC-cc
Q 024050 173 HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR-GF 217 (273)
Q Consensus 173 ~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~ 217 (273)
++...+++++++|+-..+ ++++.|.++|++|++.+|..+ |.
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Gr 350 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGL 350 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCC
Confidence 667889999999998753 578999999999999999975 44
|
| >2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=93.47 E-value=2.5 Score=37.12 Aligned_cols=154 Identities=10% Similarity=0.067 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..--.-......+.+ +++++ .+ ++-|..+... .++.+...+-+ +.
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g--d~~l~vD~n~----------~~~~~~a~~~~-~~ 212 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEIT-AAVRGEIG--DARLRLDANE----------GWSVHDAINMC-RK 212 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHTTST--TCEEEEECTT----------CCCHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHH-HHHHHHcC--CcEEEEecCC----------CCCHHHHHHHH-HH
Confidence 57778888888999999988853211101122333 45554 33 5555555321 24555554443 46
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC-CCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++. .|-. .+.++.+.++++.-.|-=++-- -++++.++++++....+++|+..+-.---.+ ..
T Consensus 213 l~~~~i~~iE-----qP~~----~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 283 (384)
T 2pgw_A 213 LEKYDIEFIE-----QPTV----SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMK 283 (384)
T ss_dssp HGGGCCSEEE-----CCSC----TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEEe-----CCCC----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHH
Confidence 7777776554 4432 2346777788776656544443 3688999999998888999987765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 284 i~~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 284 AAAVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp HHHHHHHTTCCEEECCCSCC
T ss_pred HHHHHHHCCCeEeeccCcCC
Confidence 89999999999998764443
|
| >2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} | Back alignment and structure |
|---|
Probab=93.35 E-value=0.82 Score=40.23 Aligned_cols=152 Identities=10% Similarity=-0.040 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|..+... .++.+...+-++ .|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADWQSDIDRI-RACLPLLEPGEKAMADANQ----------GWRVDNAIRLAR-AT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHGGGSCTTCEEEEECTT----------CSCHHHHHHHHH-HT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 56778888888999999988753211111122333 3455422335556655421 134544433322 24
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++ + ++..|-. .++.+.++++.-.|-=++- +-++++.++++++....+++|+..+..---.+ ..+
T Consensus 213 ~~~~-----i-~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDLD-----Y-ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTSC-----C-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhCC-----e-EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 4444 4 4555532 5778888887665554433 34688899999998889999998877543212 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++..+-+.
T Consensus 281 ~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 281 RDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp HHHHHHTTCCEEEECSBC
T ss_pred HHHHHHcCCeEEEeeccC
Confidence 999999999999885444
|
| >1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A | Back alignment and structure |
|---|
Probab=93.14 E-value=2.2 Score=37.03 Aligned_cols=150 Identities=10% Similarity=0.042 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|..+... .++.+...+-++
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 210 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRI--GYPALDQDLAVV-RSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQ 210 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEC--CCSSHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH
Confidence 567777888888999999888632 2211 22333 3444311235555555421 135555555444
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+
T Consensus 211 ~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 280 (359)
T 1mdl_A 211 A-LQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGW 280 (359)
T ss_dssp H-HHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHH
T ss_pred H-HHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHH
Confidence 4 778887765 344321 34777888888766654443 34688899999998889999998776542212
Q ss_pred ccHHHHHHHhCCeEEecc
Q 024050 194 EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~s 211 (273)
..+...|+++|+.++..+
T Consensus 281 ~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 281 IRASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHHHTTCCBCCBS
T ss_pred HHHHHHHHHcCCeEeecc
Confidence 678999999999988774
|
| >2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A | Back alignment and structure |
|---|
Probab=92.99 E-value=1.3 Score=38.36 Aligned_cols=156 Identities=8% Similarity=0.027 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|-.--........+.+ +++++. .+++-|.--.. . .++.+...+-++ .|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDan--~--------~~~~~~a~~~~~-~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDAN--M--------GYTQKEAVEFAR-AV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEECT--T--------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEECC--C--------CCCHHHHHHHHH-HH
Confidence 56778888888899999987642111111122333 455543 34554433221 1 245565555443 37
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++++ +.++..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++....+++|+..+- ---.+ ..+
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 277 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAI 277 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHH
Confidence 777765 1144555332 34677777777655543333 44788999999988888899986665 32111 678
Q ss_pred HHHHHHhCCeEEecccCCC
Q 024050 197 IPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (273)
...|+++|+.++..+.+..
T Consensus 278 ~~~A~~~g~~~~~~~~~es 296 (345)
T 2zad_A 278 VEIAESSGLKLMIGCMGES 296 (345)
T ss_dssp HHHHHTTTCEEEECCSSCC
T ss_pred HHHHHHcCCeEEEecCccc
Confidence 9999999999998876543
|
| >2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A | Back alignment and structure |
|---|
Probab=92.68 E-value=2.4 Score=37.36 Aligned_cols=155 Identities=16% Similarity=0.156 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCC-CCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVY-GQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Y-g~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..--.- .... .+.+. ++++.-.+++-|..+... .++.+...+-++.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~-avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~~- 230 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIA-NLRQVLGPQAKIAADMHW----------NQTPERALELIAE- 230 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHH-HHHHHHCTTSEEEEECCS----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHH-HHHHHhCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 67888888889999999988752111 1112 33333 444411235555555421 2456655555544
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++ ..|-. .+.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+- ---.+ ..
T Consensus 231 l~~~~i~~i-----EqP~~----~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~ 300 (388)
T 2nql_A 231 MQPFDPWFA-----EAPVW----TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIR 300 (388)
T ss_dssp HGGGCCSCE-----ECCSC----TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHH
T ss_pred HhhcCCCEE-----ECCCC----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHH
Confidence 777887665 34432 134777888887655554443 33688999999998888999987766 32112 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 301 i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 301 IGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHHHTCEECCCCCSSCS
T ss_pred HHHHHHHcCCeEEeecCCCcH
Confidence 889999999999887555443
|
| >1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=92.39 E-value=2.9 Score=36.44 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
+.++..+....+.+ .|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~ 208 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKL--GARTPAQDLEHI-RSIVKAVGDRASVRVDVNQ----------GWDEQTASIWI 208 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHH-HHHHHHHGGGCEEEEECTT----------CCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEec--CCCChHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH
Confidence 56777788888899 9999887532 2211 22222 3444311124445554321 13555555444
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
+ .|+.+++++ +..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++....+++|+..+..---.+
T Consensus 209 ~-~l~~~~i~~-----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 278 (370)
T 1nu5_A 209 P-RLEEAGVEL-----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIAN 278 (370)
T ss_dssp H-HHHHHTCCE-----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred H-HHHhcCcce-----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHH
Confidence 3 577777664 4455322 34677778877655543322 44788999999998888999997765432112
Q ss_pred -ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 -EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 -~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+++|+.++..+.+..+
T Consensus 279 ~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 279 TLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHHcCCcEEecCCcchH
Confidence 67899999999999988766544
|
| >2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A | Back alignment and structure |
|---|
Probab=92.38 E-value=3 Score=36.48 Aligned_cols=153 Identities=10% Similarity=0.049 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..--..+. ....+.+ +++++.-.+++-|..+... .++.+...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5777888888899999998875321110 0122333 3444411123444444321 235555555444 3
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+ ..
T Consensus 214 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHWI-----EEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSEE-----ECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 777776644 455332 23666777776544543333 44688999999998888999997776543212 67
Q ss_pred HHHHHHHhCCeEEeccc
Q 024050 196 IIPLCRELGIGIVPYSP 212 (273)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (273)
+...|+++|+.++..+.
T Consensus 285 i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGV 301 (371)
T ss_dssp HHHHHHHTTCCEEECSC
T ss_pred HHHHHHHcCCeEccccH
Confidence 89999999999998754
|
| >2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} | Back alignment and structure |
|---|
Probab=92.27 E-value=5.6 Score=34.99 Aligned_cols=153 Identities=12% Similarity=0.103 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCC-CCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYG-QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..-.... .....+.+ +++++.-.+++-|..+... .++.+...+-++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~- 216 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFV-EKVREIVGDELPLMLDLAV----------PEDLDQTKSFLKE- 216 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHH-HHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHH-HHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHHH-
Confidence 678888888899999999887532111 01122223 3444311124444444421 2455655555444
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+..---.+ ..
T Consensus 217 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 287 (391)
T 2qgy_A 217 VSSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIE 287 (391)
T ss_dssp HGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHH
T ss_pred HHhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHH
Confidence 777776654 444322 34777788887655543333 34688999999988888999997776543212 67
Q ss_pred HHHHHHHhCCeEEeccc
Q 024050 196 IIPLCRELGIGIVPYSP 212 (273)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (273)
+...|+++|+.++..+.
T Consensus 288 i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 288 ISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHHTTCEECCBCC
T ss_pred HHHHHHHCCCEEeccCC
Confidence 89999999999998765
|
| >3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} | Back alignment and structure |
|---|
Probab=91.86 E-value=3.5 Score=36.00 Aligned_cols=157 Identities=12% Similarity=0.079 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|-.--.-..-..+...=+++++ .+.-++.|=... .++++... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~------------~~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNC------------GYDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTT------------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCC------------CCCHHHHH----HH
Confidence 67888888899999999976543211100122222334554 433333333221 13444333 23
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+++|..+..++.++..|-... .++.+.++.++-.+. ..|=|-++...+.++++...++++|+..+. ---.+ ..
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~ 281 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRE----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLK 281 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTT----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHH
T ss_pred HHHHhhCCCCceEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHH
Confidence 334411345788888885533 356677777664443 445566888999999888888999998776 32111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 282 MIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988776544
|
| >3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=91.85 E-value=6.1 Score=34.66 Aligned_cols=158 Identities=9% Similarity=0.089 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++. |++.|-.--.-..-..+...=+++++.-.+++-|....... ++.+...+ +-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~A~~-~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINAR----------WDRRTALH-YLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTC----------SCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCC----------CCHHHHHH-HHHH
Confidence 567777777888887 99987653211000122223345655333455555554321 34444332 3456
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++++|. .|-... .++.+.++++.-.|. ..|=+-++.+.++++++....+++|+..+..---.+ ..
T Consensus 217 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELFE-----QPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEEE-----SCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEEE-----CCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 6777765554 453322 356666776654443 233355788999999988888999998776542212 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 288 ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 288 IAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp HHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHcCCeEEeCCCCccH
Confidence 889999999999876655443
|
| >2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} | Back alignment and structure |
|---|
Probab=91.68 E-value=2 Score=37.97 Aligned_cols=156 Identities=8% Similarity=0.036 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|...... .++.+...+-++ .|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDING----------AWTYDQALTTIR-AL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 56778888888889999887753211101122333 4444411123334433321 245555554443 57
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++++++ ..|-.. +.++.+.++++.-.|-=.+- +-++++.++++++....+++|+..+-.---.+ ..+
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77776654 444322 34677778877655543332 44688899999988888999987766432112 678
Q ss_pred HHHHHHhCCeEEecccCCC
Q 024050 197 IPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (273)
...|+++|+.++..+-+..
T Consensus 284 ~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 284 LTLARLANLPVICGCMVGS 302 (397)
T ss_dssp HHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHcCCeEEEecCccc
Confidence 9999999999998864443
|
| >1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A | Back alignment and structure |
|---|
Probab=91.57 E-value=2.4 Score=37.08 Aligned_cols=150 Identities=12% Similarity=0.109 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|..-- ++....+.+ +++++.- .++-|...... .++.+. .+-++ .|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~~~~-~l 211 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF-PDIRLTVDANS----------AYTLAD-AGRLR-QL 211 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HHHHH-TT
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc-CCCeEEEeCCC----------CCCHHH-HHHHH-HH
Confidence 567788888888999999876421 222334444 4555522 45545544321 134444 33333 36
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++| ..|-.. +.++.+.+++++-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 212 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (375)
T 1r0m_A 212 DEYDLTYI-----EQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRV 282 (375)
T ss_dssp GGGCCSCE-----ECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHH
T ss_pred HhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHH
Confidence 66665554 455332 3356677777664443 223345788999999988888999997776532212 678
Q ss_pred HHHHHHhCCeEEecccC
Q 024050 197 IPLCRELGIGIVPYSPL 213 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (273)
...|+++|+.++.-+-+
T Consensus 283 ~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 283 HDVAQSFGAPVWCGGML 299 (375)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999996655444
|
| >2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=91.49 E-value=2.4 Score=37.53 Aligned_cols=154 Identities=10% Similarity=0.011 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC----CCC--------C----c---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV----YGQ--------N----A---NEVLLGKALKQLPREKIQVATKFGIAGIGVA 99 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~----Yg~--------g----~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~ 99 (273)
+.++..+....+.+.|++.|..-.. +|. - + ..+.+ +++++.-.+++-|......
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v-~avR~a~G~d~~l~vDan~------ 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRM-AAIRDAVGPDVDIIAEMHA------ 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHH-HHHHHhcCCCCEEEEECCC------
Confidence 6788888888999999988765321 121 0 0 11222 2333311235555555421
Q ss_pred cccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCc
Q 024050 100 GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPI 178 (273)
Q Consensus 100 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~ 178 (273)
.++.+...+-++. |+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....
T Consensus 225 ----~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 290 (407)
T 2o56_A 225 ----FTDTTSAIQFGRM-IEELGIFYY-----EEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSL 290 (407)
T ss_dssp ----CSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCC
Confidence 2456665555554 777776654 444322 34677777777655543333 33577889999988888
Q ss_pred eEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 179 ~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
+++|+..+-.---.+ ..+...|+++|+.++..+.+
T Consensus 291 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 291 SVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999998776542212 67899999999999987664
|
| >2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* | Back alignment and structure |
|---|
Probab=91.48 E-value=3.3 Score=36.49 Aligned_cols=151 Identities=9% Similarity=0.013 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~~~e~v-~avR~avg~d~~l~vDan~----------~~~~~~a~~~~~ 228 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKV--GQPDGALDIARV-TAVRKHLGDAVPLMVDANQ----------QWDRPTAQRMCR 228 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEC--CCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHH-HHHHHHcCCCCEEEEECCC----------CCCHHHHHHHHH
Confidence 678888888899999999887522 2111 22333 4555411123333333321 245666655554
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+.++++++. .|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+
T Consensus 229 ~-l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 298 (393)
T 2og9_A 229 I-FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPF 298 (393)
T ss_dssp H-HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHH
Confidence 4 7888876653 44322 34677777877655543333 44688999999998888999987665432111
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+++|+.++..+.
T Consensus 299 ~~i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 299 LKIASLAEHAGLMLAPHFA 317 (393)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCEEeccCc
Confidence 6789999999999986543
|
| >1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A | Back alignment and structure |
|---|
Probab=91.30 E-value=3.3 Score=36.03 Aligned_cols=155 Identities=8% Similarity=0.086 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcH---HHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNAN---EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~s---e~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+.- .+.+ +++++.-..++-|...... .++.+...+-++
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~d~~~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 206 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARI-QEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIR 206 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEe--CCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 567777888888899999887532 21111 2323 3444311224555555421 135555554444
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+..+ .++.++..|-.. +.++.+.+++++-.|-=. |=+-++.+.++++++....+++|+..+..---.+
T Consensus 207 ~-l~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 278 (366)
T 1tkk_A 207 K-MEDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGA 278 (366)
T ss_dssp H-HHHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred H-HhhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHH
Confidence 3 66511 244556666432 346777777776555433 3345788899999988888899987766432112
Q ss_pred ccHHHHHHHhCCeEEecccCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~ 214 (273)
..+...|+++|+.++..+.+.
T Consensus 279 ~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 279 EKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp HHHHHHHHHHTCCEEECCSSC
T ss_pred HHHHHHHHHcCCcEEecCccc
Confidence 678999999999999877654
|
| >3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* | Back alignment and structure |
|---|
Probab=91.28 E-value=6.1 Score=34.69 Aligned_cols=158 Identities=12% Similarity=0.069 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+++.|++.|-.--.... ..+...=+++++.-.+++-|...... .++.+...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~-~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADF-NRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCH-HHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 5788888888899999998765432211 12222334555522233334443221 134443332 22233
Q ss_pred HHcCCCc-ccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 119 KRLDVDY-IDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~-iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+. | .++.++..|-...+ ++.+.++++.-.+ -..|=|-++...+.++++....+++|+..+..---.+ ..
T Consensus 210 ~~----~~~~l~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ 281 (379)
T 3r0u_A 210 NK----YSLNVEIIEQPVKYYD----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQK 281 (379)
T ss_dssp HT----SCCCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred hh----cCCCcEEEECCCCccc----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHH
Confidence 33 2 56777777754332 5667777765444 3445566888999999988888899987766432111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 282 ia~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 282 IKKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEEeCCCccH
Confidence 899999999999988776544
|
| >3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* | Back alignment and structure |
|---|
Probab=91.21 E-value=2.8 Score=36.41 Aligned_cols=154 Identities=9% Similarity=0.003 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|..--.-.. ..+...=+++++.-.+++-|...... .++.+... +.+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGI-EADIARVKAIREAVGFDIKLRLDANQ----------AWTPKDAV----KAI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHH----HHH
Confidence 6788888888899999998875432111 12222334555421234445555321 13443322 233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
++|. ..++.++..|-... .++.+.+++++-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 204 ~~L~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 4442 35677777775433 366777787765553 223355788999999988888899987766432111 678
Q ss_pred HHHHHHhCCeEEecccC
Q 024050 197 IPLCRELGIGIVPYSPL 213 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (273)
...|+++|+.++..+.+
T Consensus 278 ~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 278 NQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHTTCEEEECCCT
T ss_pred HHHHHHcCCeEEecCCC
Confidence 99999999999988777
|
| >3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* | Back alignment and structure |
|---|
Probab=91.05 E-value=2 Score=37.97 Aligned_cols=158 Identities=8% Similarity=-0.021 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEE-eccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVA-TKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~-tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++.|++.|..--.... ..+...=+++++.-.+++-|. ..... .++.+...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~-~~d~~~v~avR~a~g~~~~l~~vDan~----------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNL-DADEEFLSRVKEEFGSRVRIKSYDFSH----------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHHGGGCEEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCH-HHHHHHHHHHHHHcCCCCcEEEecCCC----------CcCHHHHHH-HHHH
Confidence 5778888889999999998875322111 122222234544111344444 44321 134443332 2334
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
|+.+++ ++.++..|-... .++.+.++++.-.|.= |=|-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 210 l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555553 335666664432 3677788888766664 7788999999999988888999987766532111 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 282 a~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEEecCCCccH
Confidence 99999999999987655433
|
| >3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=90.83 E-value=2.2 Score=37.50 Aligned_cols=154 Identities=7% Similarity=-0.019 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|+.--.-.. ..+...=+++++.-.+++-|..+.... ++.+...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~~-~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGDV-ERDIARIRDVEDIREPGEIVLYDVNRG----------WTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHTTSCCTTCEEEEECTTC----------CCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCCC----------CCHHHHHH-HHHHh
Confidence 6788888889999999999886432111 122223345655323456666664321 34443332 22233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+ ++ ++..|-. .++.+.++++.-.|-= .|=+-++++.++++++....+++|+..+-.---.+ ..+
T Consensus 213 ~~~-----~i-~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDL-----HV-MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGG-----TC-CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccC-----Ce-EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 444 44 5555533 4677778877655542 23355788999999998888999997766432111 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.+...+.+..+
T Consensus 281 a~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 281 RDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHHHHTTCEEEEECSSCSH
T ss_pred HHHHHHcCCEEEcCCCCCCH
Confidence 99999999999977665544
|
| >3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=90.61 E-value=3.9 Score=36.56 Aligned_cols=151 Identities=8% Similarity=0.045 Sum_probs=92.1
Q ss_pred CH-HHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SE-EDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~-~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+. ++..+....+.+.|++.|..--........+.+ +++++.-.+++-|...... .++.+...+-++.
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~eai~~~~~- 251 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDANT----------AYTMADARRVLPV- 251 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHHHHHH-
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 45 777778888889999887652111111122333 3444411234445444321 2456666555544
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
|+.++++++ ..|-.. +.++.+.+++++-. |-=. +=+-++++.++++++....+++|+..+-.---.+ .
T Consensus 252 L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~ 322 (428)
T 3bjs_A 252 LAEIQAGWL-----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGI 322 (428)
T ss_dssp HHHTTCSCE-----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHH
Confidence 788887654 344322 34677777776544 4323 2344688999999998889999998776532212 6
Q ss_pred cHHHHHHHhCCeEEec
Q 024050 195 EIIPLCRELGIGIVPY 210 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~ 210 (273)
.+...|+++|+.++..
T Consensus 323 ~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 323 RIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHcCCeEEec
Confidence 7899999999998877
|
| >2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} | Back alignment and structure |
|---|
Probab=90.47 E-value=1.7 Score=37.99 Aligned_cols=155 Identities=13% Similarity=-0.030 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--.-. -+....+=+++++.-.+++-|..+... .++.+... +.+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 210 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISGE-PVTDAKRITAALANQQPDEFFIVDANG----------KLSVETAL----RLL 210 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCSC-HHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecCCC-HHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHH----HHH
Confidence 577888888889999999887421111 011122223444422345666555431 13443332 334
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
++|- +..++ ++..|-. .++.+.++++.-.|-=++- +-++++.++++++....+++|+..+..---.+ ..+
T Consensus 211 ~~l~-~~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (371)
T 2ps2_A 211 RLLP-HGLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQ 282 (371)
T ss_dssp HHSC-TTCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHH
T ss_pred HHHH-hhcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHH
Confidence 4441 12245 5666532 5677888887655553333 34688899999988888999997766432112 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 283 ~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 283 RDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHHTCEEEEECSSCCH
T ss_pred HHHHHHcCCeEEecCCCcCH
Confidence 89999999999988776544
|
| >2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* | Back alignment and structure |
|---|
Probab=90.38 E-value=6 Score=34.96 Aligned_cols=154 Identities=11% Similarity=0.088 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccC----CCC------------Cc--------HHHHHHHHHhcCCCCCEEEEeccCc
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADV----YGQ------------NA--------NEVLLGKALKQLPREKIQVATKFGI 93 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~----Yg~------------g~--------se~~lg~~l~~~~r~~~~i~tK~~~ 93 (273)
.+.++..+....+.+.|++.|..-.. +|. |. ..+.+ +++++.-.+++-|......
T Consensus 149 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v-~avR~a~G~d~~l~vDan~ 227 (410)
T 2gl5_A 149 VTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARI-AAMREAMGDDADIIVEIHS 227 (410)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHH-HHHHHhcCCCCEEEEECCC
Confidence 36788888888999999998764321 121 00 11222 2333311235555554421
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHH
Q 024050 94 AGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRA 172 (273)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~ 172 (273)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.+++++-.|-=++- +-++++.++++
T Consensus 228 ----------~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 287 (410)
T 2gl5_A 228 ----------LLGTNSAIQFAKA-IEKYR-----IFLYEEPIHP----LNSDNMQKVSRSTTIPIATGERSYTRWGYREL 287 (410)
T ss_dssp ----------CSCHHHHHHHHHH-HGGGC-----EEEEECSSCS----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHH
T ss_pred ----------CCCHHHHHHHHHH-HHhcC-----CCeEECCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 2345555444433 55554 4556666432 34677777777655543333 34678899999
Q ss_pred hhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 173 HAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 173 ~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
++....+++|+..+-.---.+ ..+...|+++|+.++..+.
T Consensus 288 i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 288 LEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 988888999998776532212 6789999999999998766
|
| >2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* | Back alignment and structure |
|---|
Probab=90.28 E-value=4.9 Score=35.46 Aligned_cols=151 Identities=11% Similarity=-0.005 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~~ai~~~~ 241 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKV--GQPNCAEDIRRL-TAVREALGDEFPLMVDANQ----------QWDRETAIRMGR 241 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSCHHHHHHHH-HHHHHHHCSSSCEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEec--CCCCHHHHHHHH-HHHHHHcCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 678888888889999999887521 2111 22333 4454411123334444321 245666555555
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+.++++++ ..|-.. +.++.+.+++++-.|-=++- +-++++.++++++....+++|+..+-.---.+
T Consensus 242 ~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~ 311 (398)
T 2pp0_A 242 K-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPF 311 (398)
T ss_dssp H-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 4 777776654 444322 34677777877655543333 44688999999998888899987665432112
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+++|+.++..+.
T Consensus 312 ~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 312 LKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCeEeecCc
Confidence 6789999999999986543
|
| >2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* | Back alignment and structure |
|---|
Probab=90.10 E-value=4.4 Score=35.30 Aligned_cols=155 Identities=12% Similarity=0.072 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH-HHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR-SCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~-~~~~~s 117 (273)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|.-+... .++.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRI-EAVRERVGNDIAIRVDVNQ----------GWKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------TTBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 56778888888899999988853211111112333 3444311124445444321 12334333 3332 2
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++++ +..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+ ..
T Consensus 209 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDW-----IEQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSC-----EECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcE-----EECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 55555544 4454322 34777788887765543333 34688899999988888899987765432112 67
Q ss_pred HHHHHHHhCCeEEecccCC
Q 024050 196 IIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (273)
+...|+++|+.++..+.+.
T Consensus 280 i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 280 LAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp HHHHHHHTTCEEEECCSSC
T ss_pred HHHHHHHcCCcEEecCCCc
Confidence 8899999999998876654
|
| >2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=90.08 E-value=3 Score=36.40 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..-- ++....+.+ +++++.- .++-|...... .++.+. .+ +-+.|
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~-~~~~l 204 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF-PEATLTADANS----------AYSLAN-LA-QLKRL 204 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HH-HHHGG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc-CCCeEEEecCC----------CCCHHH-HH-HHHHH
Confidence 567788888888999999876421 222334444 4555422 34434433311 133444 33 33346
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++|. .|-.. +.++.+.+++++-.|-= .|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 205 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 275 (369)
T 2zc8_A 205 DELRLDYIE-----QPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRV 275 (369)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHH
Confidence 666655544 55332 23566677776654432 23345788999999988888899987765432111 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++..+-+.
T Consensus 276 ~~~A~~~g~~~~~~~~~e 293 (369)
T 2zc8_A 276 HALAESAGIPLWMGGMLE 293 (369)
T ss_dssp HHHHHHTTCCEEECCCCC
T ss_pred HHHHHHcCCcEEecCccc
Confidence 999999999966554443
|
| >2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=89.64 E-value=4.9 Score=35.35 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC------------CCCCcHH---H---HHHHHHhcCCCCCEEEEeccCcCCCCCcc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV------------YGQNANE---V---LLGKALKQLPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~------------Yg~g~se---~---~lg~~l~~~~r~~~~i~tK~~~~~~~~~~ 100 (273)
+.++..+....+.+.|++.|..-.. || |..+ + .+=+++++.-.+++-|......
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~g-g~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~------- 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRR-SMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG------- 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTT-BCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccC-CcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6788888888899999988764211 22 1111 1 1122333311235555554421
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCce
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~ 179 (273)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+
T Consensus 209 ---~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d 275 (392)
T 2poz_A 209 ---GLTTDETIRFCRK-IGELD-----ICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACG 275 (392)
T ss_dssp ---CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 2345554444443 55554 4556666432 34677777877665554433 335778899999888889
Q ss_pred EEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 180 AVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 180 ~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
++|+..+-.---.+ ..+...|+++|+.++..+.+
T Consensus 276 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 276 IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 99997776532212 67899999999999987664
|
| >2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B | Back alignment and structure |
|---|
Probab=89.61 E-value=4.6 Score=35.30 Aligned_cols=150 Identities=9% Similarity=0.001 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|..+... .++.+ ...
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~----~a~ 207 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKI--GGSDPAQDIARI-EAISAGLPDGHRVTFDVNR----------AWTPA----IAV 207 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHH-HHHHHSCCTTCEEEEECTT----------CCCHH----HHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecC--CCCChHHHHHHH-HHHHHHhCCCCEEEEeCCC----------CCCHH----HHH
Confidence 567788888888999999888632 2211 22333 3444422335556655421 13443 233
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.+++|. .++ ++..|-. .++.+.+++++-.|-=++- +-++++.++++++....+++|+..+..---.+
T Consensus 208 ~~~~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 277 (378)
T 2qdd_A 208 EVLNSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRA 277 (378)
T ss_dssp HHHTSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHH
Confidence 4455553 466 6666532 5778888887655543333 34678889999988888999987776432212
Q ss_pred ccHHHHHHHhCCeEEecccCCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (273)
..+...|+++|+.++..+.+..
T Consensus 278 ~~i~~~A~~~g~~~~~~~~~es 299 (378)
T 2qdd_A 278 RQIRDFGVSVGWQMHIEDVGGT 299 (378)
T ss_dssp HHHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHHHcCCeEEecCCCCc
Confidence 6789999999999998855443
|
| >3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum} | Back alignment and structure |
|---|
Probab=89.27 E-value=4.9 Score=35.41 Aligned_cols=156 Identities=14% Similarity=0.067 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCC-CCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYG-QNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+.++.+++.|++.|=.--.-. .....+.+ +++++ .+. +-|..=.. . .++.+...+
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v-~avR~~~~~--~~L~vDaN--~--------~w~~~~A~~---- 206 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARI-EAIHAAAPG--ASLILDGN--G--------GLTAGEALA---- 206 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHH-HHHHHHCTT--CEEEEECT--T--------CSCHHHHHH----
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHH-HHHHHhCCC--CeEEEECC--C--------CCCHHHHHH----
Confidence 567788888888999998764321111 11233333 34554 432 23332211 1 234443322
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.+++|..+.+++.++..|-...+ ++.+.+|.+.-.| -+.|=|.++...+.++++...++++|+..+. ---.+ .
T Consensus 207 ~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~ 281 (389)
T 3s5s_A 207 LVAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEAL 281 (389)
T ss_dssp HHHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHH
T ss_pred HHHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHH
Confidence 34444213458899998865443 5566677665444 3556677889999999988889999998776 32111 6
Q ss_pred cHHHHHHHhCCeEEecccCCCc
Q 024050 195 EIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (273)
.+...|+++|+.++..+.+..+
T Consensus 282 ~i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 282 DIAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHHcCCeEEecCCcccH
Confidence 6899999999999988776544
|
| >1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* | Back alignment and structure |
|---|
Probab=89.00 E-value=9.7 Score=33.01 Aligned_cols=152 Identities=9% Similarity=0.002 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|-.-- ++....+.+. ++++.-.+++-|..... . .++.+. .+-+ +.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDan--~--------~~~~~~-~~~~-~~l 205 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDAN--T--------AYTLGD-APQL-ARL 205 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEECT--T--------CCCGGG-HHHH-HTT
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEecc--C--------CCCHHH-HHHH-HHH
Confidence 567788888888899998876421 2223444444 44431112333333321 1 134444 3333 336
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++ +..|-.. +.++.+.+++++-.|-=. +=+-++++.++++++....+++|+..+..---.+ ..+
T Consensus 206 ~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 276 (368)
T 1sjd_A 206 DPFGLLL-----IEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 276 (368)
T ss_dssp GGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred HhcCCCe-----EeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 6666554 4455322 346777778776554422 2244788999999988888999997776532111 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++.-+-+.
T Consensus 277 ~~~A~~~g~~~~~~~~~e 294 (368)
T 1sjd_A 277 HDVCAAHGIPVWCGGMIE 294 (368)
T ss_dssp HHHHHHTTCCEEECCCCC
T ss_pred HHHHHHcCCcEEeCCccc
Confidence 999999999966554443
|
| >3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} | Back alignment and structure |
|---|
Probab=88.91 E-value=11 Score=33.16 Aligned_cols=150 Identities=9% Similarity=-0.058 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
.++..+.++.+++.|++.|..-- ++....+.+. ++++ .+.-.+.| .... .++.+. . .+-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v~-avR~a~G~~~~L~v--DaN~----------~w~~~~-~-~~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPLQ-ETRRAVGDHFPLWT--DANS----------SFELDQ-W-ETFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHHH-HHHHHHCTTSCEEE--ECTT----------CCCGGG-H-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHHH-HHHHhcCCCCEEEE--eCCC----------CCCHHH-H-HHHHH
Confidence 78888899999999999876532 2223334343 4554 23334444 3211 133444 2 33356
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++++| ..|-... .++.+.++++.-.|. ..|=|-++.+.++++++....+++|+..+-.---.+ ..
T Consensus 227 l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFH-----EQPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCE-----ESCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEE-----eCCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 777776555 3453322 367777787765443 334466888999999988888999997766432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 298 ia~~A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 298 IYKIATDNGIKLWGGTMPES 317 (400)
T ss_dssp HHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHcCCEEEecCCCCC
Confidence 89999999999988765543
|
| >3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A | Back alignment and structure |
|---|
Probab=88.78 E-value=4.9 Score=35.09 Aligned_cols=157 Identities=8% Similarity=0.004 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|-.--.... ..+...=+++++.-.+++-|...... .++.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSK-ELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCH-HHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 6788888888899999998765322111 12222334555411234444444321 134444332 34456
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++|. .|-. .+.++.+.+++++-.|- ..|=+-++.+.++++++....+++|+..+..---.+ ..+
T Consensus 208 ~~~~i~~iE-----qP~~----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVS----RNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBC----GGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCC----hhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 666665554 4422 13466777787765543 233355889999999998889999998776542212 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 279 ~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 279 IRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp HHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHcCCcEEecCccccH
Confidence 99999999999987766544
|
| >3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* | Back alignment and structure |
|---|
Probab=88.75 E-value=6.8 Score=34.21 Aligned_cols=153 Identities=13% Similarity=0.054 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++. |++.|-.--.-.....+...=+++++.-..++-|...... .++.+... +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~----~~ 216 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNG----------KWDLPTCQ----RF 216 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTT----------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCC----------CCCHHHHH----HH
Confidence 678888888899999 9998765321111112222334555522234555554321 13444332 23
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
++.|. ..++.++..|-... .++.+.+++++-.+- ..|=+-++.+.++++++....+++|+..+-.---.+ ..
T Consensus 217 ~~~l~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 217 CAAAK--DLDIYWFEEPLWYD----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp HHHTT--TSCEEEEESCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh--hcCCCEEECCCCch----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 33442 34677777775432 366777777765443 334456888999999998888999998776542111 67
Q ss_pred HHHHHHHhCCeEEecc
Q 024050 196 IIPLCRELGIGIVPYS 211 (273)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (273)
+...|+++|+.++..+
T Consensus 291 ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 291 VADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHTTCCBCCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 8999999999998765
|
| >3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A | Back alignment and structure |
|---|
Probab=88.74 E-value=5.8 Score=34.87 Aligned_cols=157 Identities=10% Similarity=0.086 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+++.|++.|-.--....-..+...=+++++.- +++-|....... ++.+...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~~----------~~~~~A~~-~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQG----------LEIDEAVP-RVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTTC----------CCGGGHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCCC----------CCHHHHHH-HHHHH
Confidence 5667777778888899998764321110012222334555522 555555554321 23333222 33455
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-cccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~l 196 (273)
+.+++++| ..|-.. +.++.+.+++++-.|. ..|=|-++.+.+.++++....+++|+..+-.---. -..+
T Consensus 216 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFI-----EQPVRA----HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66665554 345332 2367778887765443 33445688889999998888889998766543211 1678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..|
T Consensus 287 ~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 287 ARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEeCCCCccH
Confidence 99999999999876555443
|
| >2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} | Back alignment and structure |
|---|
Probab=88.72 E-value=8.8 Score=33.78 Aligned_cols=155 Identities=9% Similarity=0.032 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccC----CCC--------C----c---HHHHHHHHHhcCCCCCEEEEeccCcCCCCC
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADV----YGQ--------N----A---NEVLLGKALKQLPREKIQVATKFGIAGIGV 98 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~----Yg~--------g----~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~ 98 (273)
.+.++..+....+.+.|++.|..-.. +|. - + ..+.+ +++++.-.+++-|......
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v-~avr~avG~d~~l~vDan~----- 218 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERV-EAIRNAVGPDVDIIVENHG----- 218 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT-----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHH-HHHHHHhCCCCeEEEECCC-----
Confidence 36788888888899999998774321 221 0 0 11222 2333311235555555421
Q ss_pred ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCC
Q 024050 99 AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHP 177 (273)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~ 177 (273)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.+++++-.|-=++- +-++++.++++++...
T Consensus 219 -----~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 283 (403)
T 2ox4_A 219 -----HTDLVSAIQFAKA-IEEFN-----IFFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRS 283 (403)
T ss_dssp -----CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHH-HHhhC-----CCEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 2455555444443 56554 4456666432 34677788887766554433 3357788999998888
Q ss_pred ceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 178 ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 178 ~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
.+++|+..+-.---.+ ..+...|+++|+.++..+..
T Consensus 284 ~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 284 IDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp CSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8899987765432111 67899999999999987663
|
| >3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* | Back alignment and structure |
|---|
Probab=88.42 E-value=2.8 Score=36.66 Aligned_cols=157 Identities=12% Similarity=0.095 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++. |++.|-.--.......+...=+++++.-.+++-|...... .++.+...+ +-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESLR-AMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 578888888888998 9998764332222212222334555411133444444321 134433322 2234
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++ ++..|-.. +.++.+.++++.-.|.= .|=+-++.+.++++++....+++|+..+-. --.+ ..
T Consensus 208 l~~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ 277 (367)
T 3dg3_A 208 MADLDLL-----FAEELCPA----DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTR 277 (367)
T ss_dssp TTTSCCS-----CEESCSCT----TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHH
T ss_pred HHHhCCC-----EEECCCCc----ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHH
Confidence 4445544 44555432 23567777877655542 344557889999999888889999977665 3212 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 278 ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEECCcCCcH
Confidence 899999999999987655443
|
| >2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} | Back alignment and structure |
|---|
Probab=87.81 E-value=7.1 Score=34.52 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc--CCCC-------Cc--------HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD--VYGQ-------NA--------NEVLLGKALKQLPREKIQVATKFGIAGIGVAGV 101 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~--~Yg~-------g~--------se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~ 101 (273)
+.++..+....+.+.|++.|-.-- .||. |. ..+.+ +++++.-.+++-|......
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 567777888888999998775422 2332 11 11222 3344311235555554421
Q ss_pred cccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceE
Q 024050 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITA 180 (273)
Q Consensus 102 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~ 180 (273)
.++.+...+-++. |+.+++++ +..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++....++
T Consensus 220 --~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 2456655555443 77776654 4455332 34677778877655543333 3468899999998888899
Q ss_pred Eeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 181 VQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 181 ~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
+|+..+-.---.+ ..+...|+++|+.++..+..
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 9987765432111 67889999999999887663
|
| >4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} | Back alignment and structure |
|---|
Probab=87.68 E-value=12 Score=32.93 Aligned_cols=155 Identities=8% Similarity=0.006 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCC-CCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVY-GQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Y-g~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+.++.+++.|++.|-.--.- ......+.+ +++++ ....++-|....... ++++ ...+
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v-~avR~a~gg~~~~L~vDaN~~----------w~~~----~A~~ 228 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETV-RKVWERIRGTGTRLAVDGNRS----------LPSR----DALR 228 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHH-HHHHHHHTTTTCEEEEECTTC----------CCHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHH-HHHHHHhCCCCCeEEEeCCCC----------CCHH----HHHH
Confidence 67888888899999999987643211 111122223 34443 221445555543221 3433 2334
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.+++|. ..++ ++..|- +.++.+.++++.-.|. ..|=|-++...+.++++...++++|+..+..---.+ .
T Consensus 229 ~~~~L~--~~~i-~iEeP~------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~ 299 (391)
T 4e8g_A 229 LSRECP--EIPF-VLEQPC------NTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMA 299 (391)
T ss_dssp HHHHCT--TSCE-EEESCS------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHH
T ss_pred HHHHHh--hcCe-EEecCC------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 445554 2477 777772 1367777887765443 345566888999999988888999997766432111 6
Q ss_pred cHHHHHHHhCCeEEecccCCCcc
Q 024050 195 EIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
.+...|+++|+.+...+.+..++
T Consensus 300 ~ia~~A~~~gi~~~~~~~~es~i 322 (391)
T 4e8g_A 300 AFRDICEARALPHSCDDAWGGDI 322 (391)
T ss_dssp HHHHHHHHTTCCEEEECSSCSHH
T ss_pred HHHHHHHHcCCeEEeCCcCCCHH
Confidence 78999999999999887765543
|
| >1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=87.28 E-value=14 Score=32.27 Aligned_cols=151 Identities=11% Similarity=-0.013 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC--C-CC----CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV--Y-GQ----NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~--Y-g~----g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
+.++..+..+.+.+.|++.|..--. | +. ....+.+ +++++.-.+++-|..+... .++.+...
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~ 217 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKAC-AAVREAVGPDIRLMIDAFH----------WYSRTDAL 217 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHH-HHHHHHHCTTSEEEEECCT----------TCCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 6788888888899999998764211 1 10 0112223 3444411235555555421 24555555
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCC-HHHHHHHhhcCCceEEeeeccccc
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEAS-PGTIRRAHAVHPITAVQMEWSLWT 189 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~-~~~l~~~~~~~~~~~~q~~~~l~~ 189 (273)
+-+ +.|+.+++++ +..|-.. +.++.+.++++.-.|-=++- +-++ ++.++++++....+++|+..+-.-
T Consensus 218 ~~~-~~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G 287 (382)
T 1rvk_A 218 ALG-RGLEKLGFDW-----IEEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVG 287 (382)
T ss_dssp HHH-HHHHTTTCSE-----EECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHH-HHHHhcCCCE-----EeCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcC
Confidence 444 3567676654 4455332 34677777877655543333 3467 889999999888999998776543
Q ss_pred cccc-ccHHHHHHHhCCeEEec
Q 024050 190 RDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 190 ~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
--.+ ..+...|+++|+.++..
T Consensus 288 Git~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 288 GITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHcCCeEeec
Confidence 2112 67899999999999987
|
| >3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A | Back alignment and structure |
|---|
Probab=87.06 E-value=13 Score=32.83 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC-----------cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN-----------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAP 107 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g-----------~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~ 107 (273)
+.++..+.++.+++.|++.|-. -|.. ......=+++++.-.+++-|...... .++.
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~~ 191 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVSA 191 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCCH
Confidence 6788899999999999999887 2211 01122234555422234445544321 1344
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeecc
Q 024050 108 DYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWS 186 (273)
Q Consensus 108 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~ 186 (273)
+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|-= .|=+-+++..++++++....+++|+..+
T Consensus 192 ~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 192 PMAKV-LIKELEPYRPLFI-----EEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp HHHHH-HHHHHGGGCCSCE-----ECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred HHHHH-HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 44433 3345666665554 4554322 3567778887665543 2335578889999998888999999877
Q ss_pred ccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 187 LWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 187 l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
-.---.+ ..+...|+++|+.+...+.
T Consensus 262 ~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 262 HAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 6542111 6789999999999987754
|
| >4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* | Back alignment and structure |
|---|
Probab=86.71 E-value=13 Score=32.76 Aligned_cols=153 Identities=10% Similarity=0.068 Sum_probs=91.7
Q ss_pred CHHHHHHHH-HHHHHCCCCccccccCCC----C-C-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 39 SEEDGISMI-KHAFSKGITFFDTADVYG----Q-N-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 39 ~~~~~~~~l-~~A~~~Gin~~DtA~~Yg----~-g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
+.++..+.+ +.+++.|++.|-.--... . . ..+...=+++++.-.+++-|...... .++.+...
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~ 208 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANN----------GYSVGGAI 208 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTT----------CCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 577888888 888999999876532110 0 1 11222233455411123334434321 13444433
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeecccccc
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~ 190 (273)
+ +-+.|+.+++++| ..|-... .++.+.++++.-.|-= .|=+-++.+.++++++.. .+++|+..+..--
T Consensus 209 ~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GG 277 (393)
T 4dwd_A 209 R-VGRALEDLGYSWF-----EEPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGG 277 (393)
T ss_dssp H-HHHHHHHTTCSEE-----ECCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTH
T ss_pred H-HHHHHHhhCCCEE-----ECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCC
Confidence 3 3345677776555 4453322 3677778887655532 233457888999998888 9999998776542
Q ss_pred ccc-ccHHHHHHHhCCeEEeccc
Q 024050 191 DIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 191 ~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
-.+ ..+...|+++|+.+...+.
T Consensus 278 it~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 278 ITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHHHHHHcCCEEeecCC
Confidence 111 6789999999999987766
|
| >3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A | Back alignment and structure |
|---|
Probab=86.63 E-value=16 Score=32.03 Aligned_cols=156 Identities=9% Similarity=-0.081 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC-CC-CCc--HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV-YG-QNA--NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~-Yg-~g~--se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
+.++..+.++.+++.|++.|-.--. +. .+. .+...=+++++.-..++-|....... ++.+. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~----------~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNG----------LTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTC----------CCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHH----H
Confidence 6788888889999999998765321 00 011 22222335554223455555554321 34332 3
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
.+.+++|. +.+++ ++..|-. .++.+.+++++-.|. ..|=|-++.+.+.++++....+++|+..+..---.+
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 34455663 34567 7777644 366777887765543 334456888999999988888999997776532111
Q ss_pred -ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 -EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 -~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+++|+.++..+.+..+
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHcCCEEEeCCCCCCH
Confidence 67899999999999976655544
|
| >3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* | Back alignment and structure |
|---|
Probab=86.47 E-value=14 Score=32.42 Aligned_cols=152 Identities=9% Similarity=0.001 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|..--.-.. ..+..+=+++++.-..++-|..+... .++.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~~-~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRAP-RKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 6888899999999999999886421111 12222233455411234445555321 134544433 33456
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHH-HcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~-~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+.+++++| ..|-.. +.++.+.+++ +.-.|-=. |=+-++++.++++++....+++|+..+..---.+ ..
T Consensus 219 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSI----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCT----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77776555 445332 2366777887 65555422 2244678889999988889999998776542212 67
Q ss_pred HHHHHHHhCCeEEecc
Q 024050 196 IIPLCRELGIGIVPYS 211 (273)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (273)
+...|+++|+.++..+
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 8999999999998774
|
| >2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=85.62 E-value=18 Score=31.75 Aligned_cols=152 Identities=10% Similarity=0.023 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc-CCCCC--cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccC--CHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD-VYGQN--ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG--APDYVRSC 113 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~-~Yg~g--~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~--~~~~i~~~ 113 (273)
+.++..+....+.+.|++.|..-. ..|.. +....+=+++++.-.+++-|..+... .+ +.+...+-
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~~ 214 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAAR 214 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHHH
Confidence 678888888889999999887520 02211 11122223344311234555555421 23 45555554
Q ss_pred HHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHH-cCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccc
Q 024050 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (273)
Q Consensus 114 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~-~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~ 191 (273)
++. |+.++++++ ..|-.. +.++.+.++++ .-.|-=++- +-++++.++++++....+++|+..+..---
T Consensus 215 ~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 215 LPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 444 777776654 454322 34777788887 555543333 336788899999888888999877664321
Q ss_pred cc-ccHHHHHHHhCCeEEec
Q 024050 192 IE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 192 ~~-~~l~~~~~~~gi~v~a~ 210 (273)
.+ ..+...|+++|+.++..
T Consensus 285 t~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEecC
Confidence 11 67899999999998876
|
| >2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A | Back alignment and structure |
|---|
Probab=85.59 E-value=9.1 Score=34.22 Aligned_cols=151 Identities=11% Similarity=0.095 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|...... .++.+...+-++. |
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDANQ----------RWDVGPAIDWMRQ-L 265 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 67888888889999999987642110001122223 3444411233444433321 2455555544444 6
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-CCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+.+++++ +..|-.. +.++.+.++++. +.| -..|=+-++++.++++++....+++|+..+-.---.+ ..
T Consensus 266 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 336 (441)
T 2hxt_A 266 AEFDIAW-----IEEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 336 (441)
T ss_dssp GGGCCSC-----EECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred HhcCCCe-----eeCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHH
Confidence 6666554 4455332 245666777765 223 2334456788999999988888999987776532112 67
Q ss_pred HHHHHHHhCCeEEec
Q 024050 196 IIPLCRELGIGIVPY 210 (273)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (273)
+...|+++|+.+...
T Consensus 337 ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 337 ILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCeEEEe
Confidence 889999999998543
|
| >4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A | Back alignment and structure |
|---|
Probab=85.58 E-value=7.7 Score=34.28 Aligned_cols=150 Identities=11% Similarity=0.130 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 40 ~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
.++..+.++.+++. |++.|=.--.... ..+...=+++++.- .++-|..-... .++.+...+ +-+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~l 235 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDC-AGDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIAL 235 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCH-HHHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCH-HHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHHH
Confidence 57888888888998 9997654322111 12222333555522 45555444321 134444332 23455
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++++ ++..|-. .++.+.++++.-.|- ..|=|-++.+.++++++...++++|+..+-.---.+ ..+
T Consensus 236 ~~~~i~-----~iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 304 (398)
T 4dye_A 236 EELDLE-----YLEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKAL 304 (398)
T ss_dssp GGGCCS-----EEECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCCC-----EEcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHH
Confidence 655544 4445432 577888888765443 334456788889999998888999987766532111 678
Q ss_pred HHHHHHhCCeEEecccC
Q 024050 197 IPLCRELGIGIVPYSPL 213 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (273)
...|+++|+.++..+.+
T Consensus 305 a~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 305 AAHCETFGLGMNLHSGG 321 (398)
T ss_dssp HHHHHHHTCEEEECCSC
T ss_pred HHHHHHcCCeEEEcCCc
Confidence 99999999999988744
|
| >3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP} | Back alignment and structure |
|---|
Probab=85.39 E-value=8.2 Score=34.02 Aligned_cols=157 Identities=12% Similarity=0.047 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC--------CcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--------NANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--------g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (273)
+.++..+.++.+++.|++.|=.--.... -..+...=+++++ .+ ++-|..=... .++.+.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~--d~~L~vDaN~----------~w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAP--TARLILDGNC----------GYTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHST--TSEEEEECCS----------CCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCC--CCeEEEEccC----------CCCHHH
Confidence 5677888888889999987643221110 0012222234444 43 2333322211 234433
Q ss_pred HHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeecccc
Q 024050 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188 (273)
Q Consensus 110 i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~ 188 (273)
..+.+++|.-+.+++.++..|-...+ ++.+.+|.++-.| -+.|=|.++...+.++++...++++|+..+.
T Consensus 233 ----A~~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 ----ALRLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp ----HHHHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred ----HHHHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 23345555324567888888855333 4566677765444 3456667889999999988889999998776
Q ss_pred ccccc-ccHHHHHHHhCCeEEecccCCCc
Q 024050 189 TRDIE-EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 189 ~~~~~-~~l~~~~~~~gi~v~a~spl~~G 216 (273)
---.+ ..+...|+++|+.++..+.+..+
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 32112 67899999999999988776544
|
| >1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* | Back alignment and structure |
|---|
Probab=85.12 E-value=12 Score=32.79 Aligned_cols=151 Identities=10% Similarity=-0.028 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+.+.|++.|..--.-+. ....+.+ +++++.-.+++-|...... .++.+...+-++.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~- 232 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRI-EAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM- 232 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHH-HHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-
Confidence 5777888888889999988764211110 0122333 3444311234445444321 2455555544444
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcC----CceEEeeecccccccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVH----PITAVQMEWSLWTRDI 192 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~ 192 (273)
|+.+++++ +..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++.. ..+++|+..+..---.
T Consensus 233 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit 303 (392)
T 1tzz_A 233 LRDYPLFW-----YEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 303 (392)
T ss_dssp HTTSCCSE-----EECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHH
T ss_pred HHHcCCCe-----ecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHH
Confidence 66666554 4455332 34777778877655543332 346888899999887 7889998777654221
Q ss_pred c-ccHHHHHHHhCCe---EEec
Q 024050 193 E-EEIIPLCRELGIG---IVPY 210 (273)
Q Consensus 193 ~-~~l~~~~~~~gi~---v~a~ 210 (273)
+ ..+...|+++|+. ++..
T Consensus 304 ~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 304 EYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHHHCCCCCceEeec
Confidence 2 6789999999999 7776
|
| >2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A | Back alignment and structure |
|---|
Probab=84.35 E-value=9.2 Score=33.46 Aligned_cols=150 Identities=9% Similarity=0.023 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHH
Q 024050 41 EDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (273)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (273)
++..+....+.+.|++.|..--.-+. ....+.+ +++++.-.+++-|...... .++.+...+-++. |+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l~ 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHI-NALQHTAGSSITMILDANQ----------SYDAAAAFKWERY-FS 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHHH-HT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHHH-Hh
Confidence 77778888888999988775221110 0122333 3444311234445544321 2345444433332 44
Q ss_pred HcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEe-cCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHH
Q 024050 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEII 197 (273)
Q Consensus 120 ~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~ 197 (273)
.+ -++.++..|-.. +.++.+.+++++-.|-=.+ =+-++++.++++++....+++|+..+-.---.+ ..+.
T Consensus 209 ~~----~~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 280 (382)
T 2gdq_A 209 EW----TNIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCL 280 (382)
T ss_dssp TC----SCEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred hc----cCCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHH
Confidence 44 045566666432 2467777887765554333 244688899999988888999997776532112 6789
Q ss_pred HHHHHhCCeEEec
Q 024050 198 PLCRELGIGIVPY 210 (273)
Q Consensus 198 ~~~~~~gi~v~a~ 210 (273)
..|+++|+.++..
T Consensus 281 ~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 281 QLARYFGVRASAH 293 (382)
T ss_dssp HHHHHHTCEECCC
T ss_pred HHHHHcCCEEeec
Confidence 9999999998877
|
| >3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A | Back alignment and structure |
|---|
Probab=84.34 E-value=5.7 Score=34.44 Aligned_cols=157 Identities=9% Similarity=0.021 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|..--.-.. ..+...=+++++.-..++-|...... .++.+...+ +-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~-~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDE-EQDFERLRRLHETLAGRAVVRVDPNQ----------SYDRDGLLR-LDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHHHHHTTSSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCH-HHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHHHHH-HHHHH
Confidence 5788888889999999998875432111 12222234455421234445544322 134444332 33566
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcC-CceEEeeeccccccccc-cc
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVH-PITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~-~~~~~q~~~~l~~~~~~-~~ 195 (273)
+.+++++|. .|-... .++.+.+++++-.|- ..|=+-++.+.++++++.. ..+++|+..+-.---.+ ..
T Consensus 208 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 777766554 443322 355666665543332 3344567888999999888 88999987765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 279 i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 279 IATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEecCCcccH
Confidence 899999999999987666443
|
| >3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=83.52 E-value=17 Score=32.57 Aligned_cols=154 Identities=13% Similarity=0.152 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+.++..+..+.+++. |++.|=.--.......+...=+++++ . .++-|..-... .++.+.. .
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~--~~~~L~vDaN~----------~w~~~~A----i 253 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF--PGVPLRLDPNA----------AWTVETS----K 253 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS--TTCCEEEECTT----------CBCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC--CCCcEeeeCCC----------CCCHHHH----H
Confidence 4778888888888875 99876543211110112222234554 4 33333322211 1333322 2
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.+++|. ++ +.++..|- + .++.+.++++.-.|- +.|=|.++...+.++++...++++|+..+-.---.+
T Consensus 254 ~~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea 324 (445)
T 3va8_A 254 WVAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKS 324 (445)
T ss_dssp HHHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHH
Confidence 3445554 44 66777773 2 477788887764443 445566888889999988888999987665432111
Q ss_pred ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+++|+.+...+....|
T Consensus 325 ~kia~lA~~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 325 QTLASICATWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHHcCCEEEEeCCcccH
Confidence 67899999999999988766443
|
| >3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} | Back alignment and structure |
|---|
Probab=83.52 E-value=11 Score=32.84 Aligned_cols=156 Identities=10% Similarity=0.057 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|-.--.-..-..+...=+++++.-..++-|....... ++.+... .+-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~A~-~~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQA----------LTPFGAM-KILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTC----------CCTTTHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------cCHHHHH-HHHHHH
Confidence 56666777788888899987653211100122222334554111344444443211 2222222 234455
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++| ..|-.. +.++.+.++++.-.|. ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 215 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFI-----EQPVPR----RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66665554 344332 2367777777764443 334456788899999988888899987665432111 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++..+.+.
T Consensus 286 ~~~a~~~gi~~~~~~~~e 303 (377)
T 3my9_A 286 MAIADTAGLPGYGGTLWE 303 (377)
T ss_dssp HHHHHHHTCCEECCEECC
T ss_pred HHHHHHcCCeEecCCCCC
Confidence 999999999997655443
|
| >3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1} | Back alignment and structure |
|---|
Probab=83.34 E-value=16 Score=32.13 Aligned_cols=150 Identities=12% Similarity=0.050 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|=.-- +.+...+.+. ++++ . .++-|..=... .++.+....
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv--~~~~d~~~v~-avR~~~--~~~~l~vDaN~----------~~~~~~A~~----- 208 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKI--APGRDRAAIK-AVRLRY--PDLAIAADANG----------SYRPEDAPV----- 208 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--BTTBSHHHHH-HHHHHC--TTSEEEEECTT----------CCCGGGHHH-----
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEe--CcHHHHHHHH-HHHHHC--CCCeEEEECCC----------CCChHHHHH-----
Confidence 478889999999999998754321 2223344443 4544 4 33444333221 123333322
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+++| +..++.++..|-...+ ++.+.+|.+.-.| -..|=|.++...+.++++...++++|+..+..---.+ ..
T Consensus 209 ~~~l--~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 282 (388)
T 3qld_A 209 LRQL--DAYDLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLR 282 (388)
T ss_dssp HHHG--GGGCCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHH--hhCCCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHH
Confidence 3333 2345667777754333 5566777665444 3456567888999999988888899997766432111 67
Q ss_pred HHHHHHHhCCeEEecccCC
Q 024050 196 IIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (273)
+...|+++|+.++..+.+.
T Consensus 283 ia~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 283 ALDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp HHHHHHHTTCEEEECCCCC
T ss_pred HHHHHHHCCCeEEecCccc
Confidence 8999999999998776544
|
| >3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A* | Back alignment and structure |
|---|
Probab=82.75 E-value=21 Score=32.03 Aligned_cols=153 Identities=11% Similarity=0.143 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+.++..+..+.+++. |++.|=.--.......+...=+++++ . .++-|..-... .++.+. ..
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~--~d~~L~vDaN~----------~w~~~~----Ai 255 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAF--PDHPLRLDPNA----------AWTPQT----SV 255 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHC--TTSCEEEECTT----------CSCHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhC--CCCcEEEECCC----------CCCHHH----HH
Confidence 4778888888888875 99876542211110112222245555 4 33333322111 134332 23
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-c
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-E 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~ 193 (273)
+.+++|. ++ +.++..|-. .++.+.++++.-.|. +.|=|.++...+.++++...++++|+..+-.---. -
T Consensus 256 ~~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea 326 (445)
T 3vdg_A 256 KVAAGLE-GV--LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRS 326 (445)
T ss_dssp HHHHHTT-TT--CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hH--HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHH
Confidence 3445554 44 777777742 256777777664432 44556688888999988888899998766543211 1
Q ss_pred ccHHHHHHHhCCeEEecccCCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (273)
..+...|+++|+.+...+....
T Consensus 327 ~kia~lA~~~gv~v~~h~~~e~ 348 (445)
T 3vdg_A 327 RLLAGICDTFGLGLSMHSNSHL 348 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEEeCCcch
Confidence 6789999999999998876543
|
| >3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* | Back alignment and structure |
|---|
Probab=82.43 E-value=25 Score=30.78 Aligned_cols=155 Identities=14% Similarity=0.062 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++. |++.|-.--....-..+...=+++++.-..++-|...... .++.+...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ----------SLDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 678888899999999 9998764321111012222334555411234444444321 134444333 3345
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++ ++..|-... .++.+.++++.-.|- ..|=|-++...++++++....+++|+..+-.---.+ ..
T Consensus 236 l~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLT-----WIEEPVPQE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCS-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCC-----EEECCCCcc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 5556544 445554332 356677777765443 334456788889999988888999987776532111 67
Q ss_pred HHHHHHHhCCeEEecccC
Q 024050 196 IIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl 213 (273)
+...|+++|+.+...+.+
T Consensus 307 ia~~A~~~gi~~~~h~~~ 324 (383)
T 3toy_A 307 VAGQADAASIPMSSHILP 324 (383)
T ss_dssp HHHHHHHHTCCBCCCSCH
T ss_pred HHHHHHHcCCEEeecCHH
Confidence 899999999999866544
|
| >1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=82.30 E-value=18 Score=31.63 Aligned_cols=152 Identities=14% Similarity=0.075 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+.+.|++.|-.-- ++....+.+ +++++.- .++-|..-... .++.+.. + .+
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~----~~ 221 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANS----------AYNREDF-L----LL 221 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTT----------CCCGGGH-H----HH
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCC----------CCCHHHH-H----HH
Confidence 467778888888899998764311 122334444 4666522 35544443321 1334333 2 33
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
++| +..++.++..|-...+ ++.+.+|.++-.|- ..|=|-++...++++++....+++|+..+-.---.+ ..+
T Consensus 222 ~~l--~~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 222 KEL--DQYDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp HTT--GGGTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HHH--HhCCCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 333 2346667777754333 45666776654443 233355788899999988888899998776532212 678
Q ss_pred HHHHHHhCCeEEecccCCC
Q 024050 197 IPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (273)
...|+++|+.++..+.+..
T Consensus 296 a~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 296 AEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp HHHHHHTTCEEEECCCCCC
T ss_pred HHHHHHcCCeEEecCCccc
Confidence 8999999999988766544
|
| >3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=82.27 E-value=12 Score=32.56 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC-CCCC-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCC-HHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV-YGQN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA-PDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~-Yg~g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~-~~~i~~~~~ 115 (273)
+.++..+..+.+.+.|++.|..--. +|.. ......=+++++.-..++-|...... .++ .+...+ +-
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~d~~~A~~-~~ 214 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLAS----------KWHTCGHSAM-MA 214 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTCSHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HH
Confidence 3477888888999999998876432 2110 12222233455421234444444321 133 443332 23
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.|+.++++++ ..|-.. +.++.+.++++.-.|-= .|=+-++.+.++++++....+++|+..+-.---.+
T Consensus 215 ~~l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~ 285 (374)
T 3sjn_A 215 KRLEEFNLNWI-----EEPVLA----DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEM 285 (374)
T ss_dssp HHSGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHH
T ss_pred HHhhhcCceEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 35555655444 455332 23677788887655542 23345778888898888788899987776542111
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+++|+.+...+.
T Consensus 286 ~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 286 KKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHHcCCEEEecCC
Confidence 6789999999999988776
|
| >3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A | Back alignment and structure |
|---|
Probab=81.48 E-value=22 Score=31.51 Aligned_cols=153 Identities=12% Similarity=0.089 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC--C----cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--N----ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRS 112 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g----~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~ 112 (273)
+.++..+..+.+.+.|++.|..--..++ | +.....=+++++.-..++-|...... .++.+...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 6788888999999999998876533321 1 11112223444411234445544321 134544443
Q ss_pred HHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccc
Q 024050 113 CCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (273)
Q Consensus 113 ~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~ 191 (273)
- -+.|+.++++++ ..|-.. +.++.+.+++++-.|- ..|=+-++...++++++....+++|+..+-.---
T Consensus 249 ~-~~~Le~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 M-LPKLAPYEPRWL-----EEPVIA----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp H-HHHHGGGCCSEE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred H-HHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 2 345666665544 455332 2467778888876554 2233557889999999988899999877665321
Q ss_pred cc-ccHHHHHHHhCCeEEecc
Q 024050 192 IE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 192 ~~-~~l~~~~~~~gi~v~a~s 211 (273)
.+ ..+...|+++|+.++..+
T Consensus 319 t~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHHcCCEEEecc
Confidence 11 678999999999998776
|
| >3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A | Back alignment and structure |
|---|
Probab=81.00 E-value=23 Score=31.70 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=91.5
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+.++..+..+.+++. |++.|=.=-.......+...=+++++ . .++-|..-... .++.+. ..
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~--pd~~L~vDaN~----------~w~~~~----Ai 250 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAF--PGLPLRLDPNA----------AWTVET----SI 250 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHS--TTCCEEEECTT----------CSCHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC--CCCcEeccCCC----------CCCHHH----HH
Confidence 4678888888888874 99876532211110112222234554 4 33333332211 133332 23
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.+++|. ++ +.++..|-. .++.+.++.+.-.| -+.|=|.++...+.++++...++++|+..+-.---.+
T Consensus 251 ~~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea 321 (441)
T 3vc5_A 251 RVGRALD-GV--LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRS 321 (441)
T ss_dssp HHHHHTT-TT--CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHH-HH--HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHH
Confidence 3455564 44 777777742 25677777765433 2455566888889998888888999987655432111
Q ss_pred ccHHHHHHHhCCeEEecccCCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (273)
..+...|+++|+.+...+....
T Consensus 322 ~kia~lA~~~gv~v~~h~~~e~ 343 (441)
T 3vc5_A 322 AHIATLCATFGIELSMHSNSHL 343 (441)
T ss_dssp HHHHHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEecCCccc
Confidence 6789999999999998876543
|
| >3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=80.55 E-value=26 Score=30.49 Aligned_cols=157 Identities=8% Similarity=-0.033 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+++ .|++.|-.--.-..-..+...=+++++.-.+++-|....... ++.+...+ +-+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~----------~~~~~A~~-~~~~ 215 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQA----------WDAATGAK-GCRE 215 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTTC----------BCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHHHHH-HHHH
Confidence 45555555556665 688877543211100122222345554222444455443221 34443332 2334
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++ +.++..|-... .++.+.++++.-.+. ..|=|-++...+.++++...++++|+..+-.---.+ ..
T Consensus 216 l~~~~-----i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 286 (381)
T 3fcp_A 216 LAAMG-----VDLIEQPVSAH----DNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLA 286 (381)
T ss_dssp HHHTT-----CSEEECCBCTT----CHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHH
T ss_pred HhhcC-----ccceeCCCCcc----cHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 55555 44555554322 366777777764442 334466888899999988888999997765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 287 ia~~A~~~gi~~~~~~~~es 306 (381)
T 3fcp_A 287 LARVAQAAGIGLYGGTMLEG 306 (381)
T ss_dssp HHHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHHcCCceecCCCCcc
Confidence 88999999999987766543
|
| >1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A* | Back alignment and structure |
|---|
Probab=80.48 E-value=15 Score=32.52 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=62.3
Q ss_pred ccEEEecCCCCCCCHHHHHHHHHHHHHc-----CCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHH
Q 024050 126 IDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIP 198 (273)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~-----G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~ 198 (273)
+++ ++..|-......+-++.+.+|.++ -.| -..|=|.++.+.+.++++....+++|+..+-.---.+ ..+..
T Consensus 268 ~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~ 346 (413)
T 1kko_A 268 LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVL 346 (413)
T ss_dssp SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHH
T ss_pred cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHH
Confidence 565 777775433235678888888776 333 2334456788999999988888999998776543212 67999
Q ss_pred HHHHhCCeEEecccC
Q 024050 199 LCRELGIGIVPYSPL 213 (273)
Q Consensus 199 ~~~~~gi~v~a~spl 213 (273)
.|+++|+.++..+..
T Consensus 347 ~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 347 YCNKHGMEAYQGGTC 361 (413)
T ss_dssp HHHHHTCEEEECCCT
T ss_pred HHHHcCCeEEecCCC
Confidence 999999999998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 273 | ||||
| d1pyfa_ | 311 | c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillu | 3e-48 | |
| d1lqaa_ | 346 | c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: | 5e-47 | |
| d3eaua1 | 326 | c.1.7.1 (A:36-361) Voltage-dependent K+ channel be | 1e-42 | |
| d1s1pa_ | 315 | c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (ak | 1e-36 | |
| d1pz1a_ | 333 | c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillu | 2e-35 | |
| d1afsa_ | 319 | c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase | 9e-35 | |
| d1us0a_ | 314 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 3e-34 | |
| d1qwka_ | 312 | c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematod | 5e-34 | |
| d1hqta_ | 324 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 7e-34 | |
| d1mi3a_ | 319 | c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenu | 5e-33 | |
| d1vp5a_ | 284 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 1e-31 | |
| d1mzra_ | 274 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 5e-30 | |
| d1frba_ | 315 | c.1.7.1 (A:) FR-1 (fibroblast growth factor-induce | 7e-30 | |
| d1ur3m_ | 298 | c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Esc | 7e-27 | |
| d1gvea_ | 324 | c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) | 5e-26 | |
| d1hw6a_ | 262 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 2e-24 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Score = 160 bits (405), Expect = 3e-48
Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSG-GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+ KLG L+V +G G + G ++EE G +++ A G+T DTA +YG
Sbjct: 2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 61
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
+E L+G+ L++ RE + +ATK G V +S E SLKRL+ DYIDL
Sbjct: 62 SEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDE-SLKRLNTDYIDL 120
Query: 129 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188
+Y H D P +E + + ++ + GKI+ IG+S S ++ A+ + +Q E++L
Sbjct: 121 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 180
Query: 189 TRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSF 232
R+ E+ P +E I +PY PL G GK + +
Sbjct: 181 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGD 224
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Score = 158 bits (399), Expect = 5e-47
Identities = 56/254 (22%), Positives = 91/254 (35%), Gaps = 38/254 (14%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
++ LEVS LG G M SE D + + +A ++GI D A++Y
Sbjct: 4 HRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRP 59
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG-----------APDYVRSCCEASLK 119
G + + ++ + + +R SLK
Sbjct: 60 ETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLK 119
Query: 120 RLDVDYIDLYYQHRVDTSVPI-----------------EETIGEMKKLVEEGKIKYIGLS 162
RL DY+DLY H +T+ + + GKI+YIG+S
Sbjct: 120 RLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS 179
Query: 163 EASPGTIRRA------HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216
+ + R H + I +Q +SL R E + + + G+ ++ YS LG G
Sbjct: 180 NETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239
Query: 217 FFGGKAVVENVPAD 230
GK + PA
Sbjct: 240 TLTGKYLNGAKPAG 253
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 326 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 146 bits (368), Expect = 1e-42
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 12 KLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEV 71
LG GL VS LG G GG +++E ++ A+ GI FDTA+VY EV
Sbjct: 6 NLGKSGLRVSCLGLGTWVTFGG---QITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 62
Query: 72 LLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQ 131
+LG +K+ + + I G A + ++ +ASL+RL ++Y+D+ +
Sbjct: 63 VLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFA 122
Query: 132 HRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRR------AHAVHPITAVQMEW 185
+R D + P+EET+ M ++ +G Y G S S I + P Q E+
Sbjct: 123 NRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEY 182
Query: 186 SLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
++ R+ +E ++ L ++G+G + +SPL G GK
Sbjct: 183 HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 219
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 1e-36
Identities = 48/234 (20%), Positives = 75/234 (32%), Gaps = 33/234 (14%)
Query: 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN 69
VKL G + LG+G V + + K A G D+A +Y N
Sbjct: 2 CVKLND-GHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---N 52
Query: 70 EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLY 129
E +G A++ + P+ VR E SLK+ +DY+DLY
Sbjct: 53 EEQVGLAIRSKIADGSVKREDIFYTSK---LWSTFHRPELVRPALENSLKKAQLDYVDLY 109
Query: 130 YQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPGTIR 170
H + P + T M+K + G K IG+S + +
Sbjct: 110 LIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 169
Query: 171 RA--HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222
V + +++ C+ I +V YS LG
Sbjct: 170 MILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWV 223
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Score = 127 bits (319), Expect = 2e-35
Identities = 68/210 (32%), Positives = 102/210 (48%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
+ G+E S++G G + G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
++GKA+K+ + + + + E SLKRL DYIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQ 123
Query: 131 QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190
H D VPIEET MK+L + GKI+ IG+S S + AV P+ +Q ++L+ R
Sbjct: 124 VHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFER 183
Query: 191 DIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220
++EE ++P ++ I + Y L RG G
Sbjct: 184 EMEESVLPYAKDNKITTLLYGSLCRGLLTG 213
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 125 bits (314), Expect = 9e-35
Identities = 50/235 (21%), Positives = 83/235 (35%), Gaps = 33/235 (14%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
RV L G + LG+G V++++ I K A G FD+A +Y
Sbjct: 6 LRVALND-GNFIPVLGFGTT-----VPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE--- 56
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
E +G+A++ + P+ VR+C E +LK +DY+DL
Sbjct: 57 VEEEVGQAIRSKIEDGTVKREDI---FYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDL 113
Query: 129 YYQHR-------------------VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTI 169
Y H + +V I +T M+K + G K IG+S + +
Sbjct: 114 YIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQL 173
Query: 170 RRA--HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222
R V + + +++ C+ I +V Y LG
Sbjct: 174 ERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWV 228
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Length = 314 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 3e-34
Identities = 52/234 (22%), Positives = 82/234 (35%), Gaps = 36/234 (15%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
R+ L G ++ LG G +K A G D A VY
Sbjct: 3 SRILLNN-GAKMPILGLGTWKSP--------PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
NE +G A+++ RE++ + I V+ C+ +L L +DY+DL
Sbjct: 51 NENEVGVAIQEKLREQVVKREELFIVSKLWCTYHE---KGLVKGACQKTLSDLKLDYLDL 107
Query: 129 YYQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPGTI 169
Y H P I +T M++LV+EG +K IG+S + +
Sbjct: 108 YLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQV 167
Query: 170 RRA--HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+ +E++I C+ GI + YSPLG
Sbjct: 168 EMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWA 221
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 123 bits (308), Expect = 5e-34
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 24/223 (10%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+KL G+E+ +G G S + I+ +K A G DTA VY
Sbjct: 2 ASIKLSN-GVEMPVIGLGTWQSS--------PAEVITAVKTAVKAGYRLIDTASVYQ--- 49
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
NE +G A+K+L E + + I + AP + SLK+L ++Y+DL
Sbjct: 50 NEEAIGTAIKELLEEGVVKREELFITTKAW---THELAPGKLEGGLRESLKKLQLEYVDL 106
Query: 129 YYQHRVD---------TSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT 179
Y H + P+E+ + + + G K +G+S + I RA A+
Sbjct: 107 YLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTP 166
Query: 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 222
+ L + + + C++ I + Y+ LG
Sbjct: 167 VHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFT 209
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 123 bits (308), Expect = 7e-34
Identities = 47/229 (20%), Positives = 85/229 (37%), Gaps = 33/229 (14%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
V L T G ++ +G G + IK+A + G D A ++G NE
Sbjct: 5 VLLHT-GQKMPLIGLGTWKSE--------PGQVKAAIKYALTVGYRHIDCAAIFG---NE 52
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
+ +G+AL++ V + + P+ V +L L ++Y+DLY
Sbjct: 53 LEIGEALQETVGPGKAVPREELFVTSKLWNTKHH--PEDVEPALRKTLADLQLEYLDLYL 110
Query: 131 QHRVDT-------------------SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRR 171
H + ++T ++ LV +G ++ +GLS S I
Sbjct: 111 MHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDD 170
Query: 172 AHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220
+V + ++ + E+I C+ G+ + YSPLG
Sbjct: 171 VLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAW 219
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Score = 120 bits (302), Expect = 5e-33
Identities = 54/239 (22%), Positives = 85/239 (35%), Gaps = 40/239 (16%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
+P +KL + G + +G+GC L+ + A G FD A+ YG
Sbjct: 2 IPDIKLSS-GHLMPSIGFGCWKLA--------NATAGEQVYQAIKAGYRLFDGAEDYG-- 50
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
NE +G +K+ E + + + P V + +L L VDY+D
Sbjct: 51 -NEKEVGDGVKRAIDEGLVKREEI---FLTSKLWNNYHDPKNVETALNKTLADLKVDYVD 106
Query: 128 LYYQH-------------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162
L+ H V VPI ET ++KLV GKIK IG+S
Sbjct: 107 LFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVS 166
Query: 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221
+ I ++ + ++I ++ G+ I YS G F
Sbjct: 167 NFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEM 225
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Score = 116 bits (290), Expect = 1e-31
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 17/206 (8%)
Query: 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ 66
QVP+V L G+E+ LGYG + E + A G DTA Y
Sbjct: 1 QVPKVTLNN-GVEMPILGYGVFQIP--------PEKTEECVYEAIKVGYRLIDTAASYM- 50
Query: 67 NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYI 126
NE +G+A+K+ E I + + + + + E SLK+L ++YI
Sbjct: 51 --NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDV---GYESTKKAFEKSLKKLQLEYI 105
Query: 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
DLY H+ + M+++ ++G ++ IG+S P + H I +
Sbjct: 106 DLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIE 163
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSP 212
+ +E I R I + P
Sbjct: 164 IHPFYQRQEEIEFMRNYNIQPEAWGP 189
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Score = 111 bits (279), Expect = 5e-30
Identities = 52/212 (24%), Positives = 80/212 (37%), Gaps = 22/212 (10%)
Query: 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA 68
+KL G + +LG G S E+ I+ I+ A G DTA Y
Sbjct: 4 TVIKLQD-GNVMPQLGLGVWQAS--------NEEVITAIQKALEVGYRSIDTAAAYK--- 51
Query: 69 NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDL 128
NE +GKALK + ++ + R SLK+L +DYIDL
Sbjct: 52 NEEGVGKALKNASVNREELFITT---------KLWNDDHKRPREALLDSLKKLQLDYIDL 102
Query: 129 YYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSL 187
Y H ++ + +L +EG IK IG+ ++R +T V + L
Sbjct: 103 YLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIEL 162
Query: 188 WTRDIEEEIIPLCRELGIGIVPYSPLGRGFFG 219
+ ++ I +SPL +G G
Sbjct: 163 HPLMQQRQLHAWNATHKIQTESWSPLAQGGKG 194
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Score = 112 bits (280), Expect = 7e-30
Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 36/229 (15%)
Query: 11 VKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANE 70
V+L T ++ +G G +K A G D A Y NE
Sbjct: 4 VELST-KAKMPIVGLGTWKSP--------PNQVKEAVKAAIDAGYRHIDCAYAYC---NE 51
Query: 71 VLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY 130
+G+A+++ +EK I ++ + +L L +DY+DLY
Sbjct: 52 NEVGEAIQEKIKEKAVQREDLFIVSKLWPTCFE---KKLLKEAFQKTLTDLKLDYLDLYL 108
Query: 131 QHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPGTIRR 171
H P E M++LV++G +K +G+S + I R
Sbjct: 109 IHWPQGLQPGKELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIER 168
Query: 172 --AHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218
V + +E++I C GI + YSPLG
Sbjct: 169 LLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDR 217
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Score = 104 bits (258), Expect = 7e-27
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
V R+ + QG E S+ G L +S +S I+ G+T D AD+YG
Sbjct: 2 VQRITIAPQGPEFSRFVMGYWRLMDWN---MSARQLVSFIEEHLDLGVTTVDHADIYGGY 58
Query: 68 ANEVLLGKALKQLP--REKIQVATKFGIAGIGVAGVIVKGA---PDYVRSCCEASLKRLD 122
E G+ALK P RE++++ +K GIA ++ D++ E SL L
Sbjct: 59 QCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLA 118
Query: 123 VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHP--ITA 180
D++DL HR D + +E K L + GK+++ G+S +P + P +
Sbjct: 119 TDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLAT 178
Query: 181 VQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSP 212
Q+E S + + + + ++L + + +S
Sbjct: 179 NQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSC 211
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Score = 96.2 bits (238), Expect = 2e-24
Identities = 44/206 (21%), Positives = 71/206 (34%), Gaps = 20/206 (9%)
Query: 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN 67
VP + L G + +LGYG + D ++ A G DTA +YG N
Sbjct: 2 VPSIVLND-GNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG-N 51
Query: 68 ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYID 127
V A + R+ + + TK + D + SL +L +D +D
Sbjct: 52 EEGVGAAIAASGIARDDLFITTKL---------WNDRHDGDEPAAAIAESLAKLALDQVD 102
Query: 128 LYYQHRVDTSVPIEE-TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWS 186
LY H + +M +L G + IG+S + R A + +
Sbjct: 103 LYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIE 162
Query: 187 LWTRDIEEEIIPLCRELGIGIVPYSP 212
L + EI + I + P
Sbjct: 163 LHPAYQQREITDWAAAHDVKIESWGP 188
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 273 | |||
| d1pyfa_ | 311 | Putative oxidoreductase IolS {Bacillus subtilis [T | 100.0 | |
| d1pz1a_ | 333 | Putative oxidoreductase YhdN {Bacillus subtilis [T | 100.0 | |
| d1lqaa_ | 346 | Tas protein {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1gvea_ | 324 | Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus | 100.0 | |
| d1ur3m_ | 298 | Hypothetical oxidoreductase YdhF {Escherichia coli | 100.0 | |
| d3eaua1 | 326 | Voltage-dependent K+ channel beta subunit {Rat (Ra | 100.0 | |
| d1hw6a_ | 262 | 2,5-diketo-D-gluconic acid reductase A {Corynebact | 100.0 | |
| d1qwka_ | 312 | Hypothetical protein C07D8.6 {Nematode (Caenorhabd | 100.0 | |
| d1afsa_ | 319 | 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus | 100.0 | |
| d1s1pa_ | 315 | Prostaglandin d2 11-ketoreductase (akr1c3) {Human | 100.0 | |
| d1us0a_ | 314 | Aldose reductase (aldehyde reductase) {Human (Homo | 100.0 | |
| d1mi3a_ | 319 | Xylose reductase {Fungi (Candida tenuis) [TaxId: 4 | 100.0 | |
| d1mzra_ | 274 | 2,5-diketo-D-gluconic acid reductase A {Escherichi | 100.0 | |
| d1hqta_ | 324 | Aldose reductase (aldehyde reductase) {Pig (Sus sc | 100.0 | |
| d1frba_ | 315 | FR-1 (fibroblast growth factor-induced) protein {M | 100.0 | |
| d1vp5a_ | 284 | 2,5-diketo-D-gluconic acid reductase A {Thermotoga | 100.0 | |
| d1jpma1 | 234 | L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: | 89.72 | |
| d1sjda1 | 242 | N-acylamino acid racemase {Amycolatopsis sp. [TaxI | 89.53 | |
| d1kcza1 | 253 | beta-Methylaspartase {Clostridium tetanomorphum [T | 88.13 | |
| d1r0ma1 | 243 | N-acylamino acid racemase {Deinococcus radiodurans | 87.96 | |
| d1wuea1 | 241 | N-acylamino acid racemase {Enterococcus faecalis [ | 87.63 | |
| d1kkoa1 | 251 | beta-Methylaspartase {Citrobacter amalonaticus [Ta | 87.43 | |
| d2chra1 | 244 | Chlormuconate cycloisomerase {Alcaligenes eutrophu | 86.43 | |
| d1jdfa1 | 309 | D-glucarate dehydratase {Escherichia coli [TaxId: | 85.44 | |
| d1wufa1 | 244 | N-acylamino acid racemase {Listeria innocua [TaxId | 83.96 | |
| d1nu5a1 | 243 | Chlormuconate cycloisomerase {Pseudomonas sp. p51 | 83.89 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=4.8e-59 Score=408.20 Aligned_cols=264 Identities=28% Similarity=0.518 Sum_probs=233.1
Q ss_pred CcccCCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEE
Q 024050 9 PRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQV 87 (273)
Q Consensus 9 ~~r~lg~sg~~vs~lglG~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i 87 (273)
++|+||+||++||+||||||++|+. ++...+++++.++|++|+++|||+||||+.||.|.+|+.+|++++..+|++++|
T Consensus 1 ~~~rLG~tgl~vS~iglGt~~~g~~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lg~~l~~~~r~~~~i 80 (311)
T d1pyfa_ 1 KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVI 80 (311)
T ss_dssp CCEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEE
T ss_pred CCcccCCCCCeecceeeeCcccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEehhhcCCCccHHHHhhhhhcccccceec
Confidence 5899999999999999999999863 334568999999999999999999999999999999999999999888999999
Q ss_pred EeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHH
Q 024050 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (273)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~ 167 (273)
+||++..... .....+.+++.|++++++||+||++||+|++++|+|+...+.++++++|++|+++||||+||+|+++++
T Consensus 81 ~tK~~~~~~~-~~~~~~~~~~~i~~s~~~SL~rl~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~Gkir~iGvs~~~~~ 159 (311)
T d1pyfa_ 81 ATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLE 159 (311)
T ss_dssp EEEECEEEET-TEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHH
T ss_pred ceeccCCCCC-cccccccchHHHHHHHHhhHHhhCCcHHhhhcccCCCcccchhhHHHHHHHHHhCCeEEeecccCCcHH
Confidence 9999866532 223557789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCC-CCCCchhhhhcc---------
Q 024050 168 TIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLVQRR--------- 237 (273)
Q Consensus 168 ~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~-~~~~~~~~~~~~--------- 237 (273)
.+.++.+..+++++|++||++++..+.+++++|+++||++++|+||++|+|++++... ..|.........
T Consensus 160 ~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~~i~v~~~~~l~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T d1pyfa_ 160 QLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKE 239 (311)
T ss_dssp HHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGGGSGGGSHHHHHH
T ss_pred HHHHHhhcCCcceEeeeecccchhhhHHHHHHHHHCCceEEEeccccCCccCCCcCcCCCCccccccccchhhccchhhH
Confidence 9999999999999999999999988788999999999999999999999999985443 334332221110
Q ss_pred ---CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 238 ---EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 238 ---~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
....+.++|.++++|++|+||+|++++|.|+++++|
T Consensus 240 ~~~~~~~~~~ia~~~~~s~~q~al~~~l~~~~v~~vi~G 278 (311)
T d1pyfa_ 240 NIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPG 278 (311)
T ss_dssp HHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEEC
Confidence 012346889999999999999999999999999987
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=2.6e-57 Score=400.77 Aligned_cols=265 Identities=29% Similarity=0.450 Sum_probs=230.0
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQ 86 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~ 86 (273)
|+||+||+||++||+||||||++|+.+....+++++.++|++|+++|||+||||+.||.|.||+.+|+++++ ..|++++
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~r~~~~ 80 (333)
T d1pz1a_ 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVI 80 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCE
T ss_pred CCCeECCCCCCCccCeeEcCCccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEccCccCCCccHHHHhhccccccccchhh
Confidence 899999999999999999999998766556789999999999999999999999999999999999999987 7899999
Q ss_pred EEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCH
Q 024050 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 166 (273)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~ 166 (273)
++||.+..... .......+++.+.+++++||+||++||+|++++|+|+...+..+++++|++|+++|+||+||+||+++
T Consensus 81 ~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~sL~rL~~~~iDl~~lH~~d~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~ 159 (333)
T d1pz1a_ 81 LATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSI 159 (333)
T ss_dssp EEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCH
T ss_pred ccccccccccc-ccccccchHHHHHHHHHhhhhccCCChhhccccccCccccchhhHHHHHHHHHHcCCEEEEeecccch
Confidence 99998765432 22344678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCch-hhhhc--cCc----
Q 024050 167 GTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS-FLVQR--REP---- 239 (273)
Q Consensus 167 ~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~-~~~~~--~~~---- 239 (273)
..+..+.....+..+|+.||++++..+.+++++|+++||++++|+||++|+|++++.....+... ..... ...
T Consensus 160 ~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~s~l~~G~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (333)
T d1pz1a_ 160 EQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFK 239 (333)
T ss_dssp HHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCCCCTTCGGGSCGGGSTTTHH
T ss_pred hhccchhccccccccccccccccccccccccchhhcccccceeccccccccccCccCCCcccccccccccCccccchhhH
Confidence 99999999999999999999999988899999999999999999999999999995544333221 11110 001
Q ss_pred ------hhHHHHH-HhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 240 ------GQEQEYL-FSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ------~~~~~~~-~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.+++ .+||+|++|+||+|++++|.|+++++|
T Consensus 240 ~~~~~~~~~~~~a~~~~g~s~~q~al~~~l~~~~v~~vI~G 280 (333)
T d1pz1a_ 240 EYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWG 280 (333)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEE
T ss_pred HHHHhhhhhhhccccccCCCHHHHHHHHHHhCCCCeEEEEC
Confidence 1123343 468999999999999999999999876
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.7e-55 Score=386.16 Aligned_cols=262 Identities=27% Similarity=0.360 Sum_probs=214.4
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCC-------CCcHHHHHHHHHhc-
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg-------~g~se~~lg~~l~~- 79 (273)
|+||+||+||++||+||||||.+|+ ..+++++.++|++|++.|||+||||+.|| .|.+|..+|.+++.
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~----~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~~~~~~~~G~~E~~~g~~~~~~ 76 (346)
T d1lqaa_ 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCCeECCCCCCEecCeeEeCccCCC----CCCHHHHHHHHHHHHHcCCCEEEcccccCCCcccccccchhhhhcchhhhc
Confidence 8999999999999999999998764 45889999999999999999999999998 58999999999987
Q ss_pred CCCCCEEEEec-cCcCCCCC--ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-----------------CC
Q 024050 80 LPREKIQVATK-FGIAGIGV--AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-----------------VP 139 (273)
Q Consensus 80 ~~r~~~~i~tK-~~~~~~~~--~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-----------------~~ 139 (273)
.......+.++ .+...... .......+++.+++++++||+|||+||||+|++|+|+.. ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T d1lqaa_ 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred cccceeeeeecccCCCccccccccccccccHHHHHHHHHHHHHHhCCCeeeeeehhccCccccccccccccccccccccc
Confidence 33333333333 22222111 123345689999999999999999999999999998732 34
Q ss_pred HHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc------CCceEEeeecccccccccccHHHHHHHhCCeEEecccC
Q 024050 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl 213 (273)
.+++|++|++|+++|+||+||+||++++.++++++. .+++++|++||++++..+.+++++|+++||.+++|+||
T Consensus 157 ~~~~~~~l~~l~~~G~ir~iGvS~~~~~~~~~~~~~~~~~~~~~~~~~q~~yn~~~~~~e~~~~~~~~~~~i~v~a~~pl 236 (346)
T d1lqaa_ 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCeeEEEEeccCHHHHHHHHHHhhhcCCCCeEEEeCCCccccchHHHHHHHHHHHhCCeEEEeccc
Confidence 579999999999999999999999999998887653 67999999999999988889999999999999999999
Q ss_pred CCccCCCCCCCCCCCCchhhhhcc------------CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 214 GRGFFGGKAVVENVPADSFLVQRR------------EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 214 ~~G~L~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++|+|++++.....|......... ..+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 237 ~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~s~aq~al~~~l~~~~v~~vl~G 308 (346)
T d1lqaa_ 237 GFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLG 308 (346)
T ss_dssp GGGGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEEC
T ss_pred ccccccCCccCCCCCccccccccchhhhhhHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHCCCCeEEEEC
Confidence 999999985544333322211110 012235789999999999999999999999999887
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-53 Score=371.48 Aligned_cols=252 Identities=24% Similarity=0.292 Sum_probs=213.8
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~ 85 (273)
|++++||+||++||+||||||.+++ | ..+++++.++|++|++.|||+||||+.||+|.+|+++|++|+. .+|+++
T Consensus 2 m~~~~lg~~G~~vs~ig~G~~~~~~-~--~~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~se~~lG~al~~~~~~r~~~ 78 (298)
T d1ur3m_ 2 VQRITIAPQGPEFSRFVMGYWRLMD-W--NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 78 (298)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-T--TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CCceEeCCCCCEeCCEEEeCcccCC-C--CCCHHHHHHHHHHHHHcCCCEEEeccccCCccccccccccccccccchhhh
Confidence 8999999999999999999999874 3 3589999999999999999999999999999999999999986 569999
Q ss_pred EEEeccCcCCCCC---ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 86 QVATKFGIAGIGV---AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 86 ~i~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
+|+||++...... .....+.+++.+++++++||+|||+||||+|++|+++...+.+++|++|++++++||||+||+|
T Consensus 79 ~i~tK~g~~~~~~~~~~~~~~~~s~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~e~~~~l~~lk~~GkIr~iG~S 158 (298)
T d1ur3m_ 79 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 158 (298)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred hhhhcccccccCCCcCcccCCCCCHHHHHHHHHhhhhhhccccccccccccccccchhHHHHHHHHHhhccCcceeecCC
Confidence 9999998665321 1224467899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEeeeccccccccc-ccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 163 EASPGTIRRAHAVH--PITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 163 ~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
||+++.++.+.... .+..+|++||++++... ..+...|++++|.+++++||++|.+.+.... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~------~~~~----- 227 (298)
T d1ur3m_ 159 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYF------QPLR----- 227 (298)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSCGGG------HHHH-----
T ss_pred CCcHHHHHHHHhhhcccccccccccCchhhhhhhhhhhhhHhhcCEeeeecccccccccccccch------hhhh-----
Confidence 99999999988764 45567778888887654 6788999999999999999999887753110 0010
Q ss_pred hhHHHH-HHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEY-LFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~-~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
...... +..++.|++|+||+|+|++|.|+++++|
T Consensus 228 ~~~~~~~~~~~~~s~~q~al~~~l~~~~v~~vI~G 262 (298)
T d1ur3m_ 228 DELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIG 262 (298)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEEC
T ss_pred hhhhhHHHhhcCCCHHHHHHHHHHhCCCCeEEEEC
Confidence 112223 3445579999999999999999999987
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.6e-53 Score=372.18 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=222.1
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQV 87 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i 87 (273)
||+||+||++||+||||||.. +|...+++++.++|++|+++|||+||||+.||+|.||..+|+++++ ..|++++|
T Consensus 4 YR~lG~tg~~vs~iglGt~~~---~g~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~~r~~~~i 80 (326)
T d3eaua1 4 YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVI 80 (326)
T ss_dssp EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEE
T ss_pred cccCCCCCCcccCeeecCCCc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHhHHHHhcCCcceeEEe
Confidence 899999999999999999874 4456789999999999999999999999999999999999999987 57999999
Q ss_pred EeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHH
Q 024050 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPG 167 (273)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~ 167 (273)
+||++..... ....+.+++.+++++++||+||++||||+|++|+|+...+..+.++.+.+++++|+++++|+|+++..
T Consensus 81 ~tk~~~~~~~--~~~~~~~~~~~~~s~~~SL~rL~~d~iDl~~lH~pd~~~~~~e~~~~~~~~~~~g~~~~~g~s~~~~~ 158 (326)
T d3eaua1 81 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM 158 (326)
T ss_dssp EEEESBCCSS--GGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHH
T ss_pred eeeccccccc--ccccCccHHHHHHHHHHHHhhcCccceeeecccCCCccccchhhhcccceeeeeeccccccccccccc
Confidence 9999876532 23456789999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHh------hcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh------
Q 024050 168 TIRRAH------AVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV------ 234 (273)
Q Consensus 168 ~l~~~~------~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~------ 234 (273)
...+.. ...++.++|..+|++++..+ .+++++|+++||+|++|+||++|+|++++.....+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~v~~~spl~~G~l~~~~~~~~~~~~~~~~~~~~~~ 238 (326)
T d3eaua1 159 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWL 238 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSCCTTSGGGSTTCHHH
T ss_pred hhhhhhcchhccCCCceeeeccccchhhhhhhHHHHHHHHHHcCCEEEeecccccCccccccCCCCCccccccccccccc
Confidence 655543 23678899999999998654 67999999999999999999999999986554433211000
Q ss_pred -h----------ccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 -Q----------RREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 -~----------~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. ......++++|.++++|++|+||+|++++|.|+++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~a~~~~~t~aq~al~~~l~~~~v~~vi~G 288 (326)
T d3eaua1 239 KDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLG 288 (326)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEEC
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHCCCCeEEEeC
Confidence 0 00012357889999999999999999999999999987
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Probab=100.00 E-value=5.4e-51 Score=348.79 Aligned_cols=228 Identities=22% Similarity=0.302 Sum_probs=197.6
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
|+|+++| +||++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.++.+++. .+|++
T Consensus 1 ~ip~~~l-~~G~~v~~ig~Gt~~~--------~~~~~~~~l~~A~d~Gi~~~DTA~~YG---~ee~~~~~~~~~~~~r~~ 68 (262)
T d1hw6a_ 1 TVPSIVL-NDGNSIPQLGYGVFKV--------PPADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDD 68 (262)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CGGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGG
T ss_pred CCCeEEC-CCCCEecceeeeCCCC--------ChHHHHHHHHHHHHcCCCEEEcccccC---ChhhhCcccccCCCCcce
Confidence 6789999 8999999999999875 567899999999999999999999999 45555556654 78999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCC-HHHHHHHHHHHHHcCCccEEecCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSE 163 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~-~~~~~~~L~~l~~~G~ir~iGvS~ 163 (273)
+++.||++... .+++.+++++++||+||++||||+|++|+|++..+ ..++|++|++|+++||||+||+||
T Consensus 69 ~~~~tk~~~~~---------~~~~~~~~sl~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 139 (262)
T d1hw6a_ 69 LFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSN 139 (262)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEeeeccccc---------ccccchhhhhhhhhhhcccceeeeeeeeccCCCCccchhhHHHHHHHHHhCcceeeeccc
Confidence 99999987654 45788999999999999999999999999997765 779999999999999999999999
Q ss_pred CCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHH
Q 024050 164 ASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQ 243 (273)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
++.+.++++.+..++.++|++||+..+..+..++++|+++||++++|+||++|.+... ..+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~a~~pl~~G~~~~~----------------~~~~l~ 203 (262)
T d1hw6a_ 140 HLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLF----------------GAEPVT 203 (262)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGGGSSCCT----------------TSHHHH
T ss_pred ccchhhhhHhhhcccCCccceechhhccccccchhhHHHcCcEEEEeecccccccccc----------------ccchhh
Confidence 9999999999888888899999999988778899999999999999999999865421 122467
Q ss_pred HHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 244 EYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 244 ~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++|.+||+|++|+||+|++++|.| |++|
T Consensus 204 ~~a~~~g~t~aq~al~~~l~~~~v--vi~G 231 (262)
T d1hw6a_ 204 AAAAAHGKTPAQAVLRWHLQKGFV--VFPK 231 (262)
T ss_dssp HHHHHHTCCHHHHHHHHHHHTTCB--BCCC
T ss_pred hHHHHcCCCHHHHHHHHHHhCCCE--EEEC
Confidence 899999999999999999999986 6665
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.1e-50 Score=353.44 Aligned_cols=241 Identities=22% Similarity=0.297 Sum_probs=202.5
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCCC
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r~ 83 (273)
..+| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| ||+.+|++|++ .+|+
T Consensus 3 ~~kL-~tG~~vs~lg~Gt~~~--------~~~~~~~~i~~Al~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~r~ 70 (312)
T d1qwka_ 3 SIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKRE 70 (312)
T ss_dssp EEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGG
T ss_pred cEEC-CCCCccccceeECCCC--------CHHHHHHHHHHHHHcCCCEEEChhhhc---CHHHHHHHHHHhhhccccccc
Confidence 4688 7999999999999863 678999999999999999999999998 89999999985 5799
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC---------CCCHHHHHHHHHHHHHcC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------SVPIEETIGEMKKLVEEG 154 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------~~~~~~~~~~L~~l~~~G 154 (273)
++++.+|..... .+++.+++++++||+||++||||+|++|+|+. ..+++++|++|++++++|
T Consensus 71 ~~~i~~k~~~~~---------~~~~~~~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~ee~~~~l~~l~~~G 141 (312)
T d1qwka_ 71 ELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAG 141 (312)
T ss_dssp GCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTT
T ss_pred cceeeccccccc---------ccchhHHHHHHHHhhhcCCCcceeeecccCCcccccccccccCcHHHHHHHHHHHHhcC
Confidence 999999987544 45788999999999999999999999999974 356899999999999999
Q ss_pred CccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCC-CCchhh
Q 024050 155 KIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV-PADSFL 233 (273)
Q Consensus 155 ~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~-~~~~~~ 233 (273)
+||+||+||++++.++++++...+.++|.++++..+..+.+++++|+++||++++|+||++|.+.+....... ......
T Consensus 142 ~ir~iG~Sn~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~spL~~g~~~~~~~~~~~~~~~~~~ 221 (312)
T d1qwka_ 142 LAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPA 221 (312)
T ss_dssp SBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCSCCEECCBCTTCCBCCCEEC
T ss_pred ccccccccccchhHHHHHhhccccchhhhhhcchhhcccHHHHHHHHhcCccccccCcccccccccCCCCccchhccccc
Confidence 9999999999999999999987777777777776666668899999999999999999999977764222111 111111
Q ss_pred hhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 234 VQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
........+.++|.++++|++|+||+|++++|.+ |++|
T Consensus 222 ~~~~~~~~l~~ia~~~~~t~aq~aL~w~l~~~~~--vI~G 259 (312)
T d1qwka_ 222 PSDLQDQNVLALAEKTHKTPAQVLLRYALDRGCA--ILPK 259 (312)
T ss_dssp SSGGGCHHHHHHHHHHTCCHHHHHHHHHHHTTCE--EECC
T ss_pred cchhhHHHHHHHHHHcCCCHHHHHHHHHHHCCCE--EEEC
Confidence 1112244578999999999999999999999964 6666
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.9e-50 Score=350.74 Aligned_cols=239 Identities=23% Similarity=0.274 Sum_probs=197.7
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------C
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------L 80 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~ 80 (273)
.|++|..+++|++||.||||||.++. ++++++.++|+.|++.|||+||||+.|| ||+.+|++|++ .
T Consensus 3 ~~~~r~~~~~G~~ip~iGlGt~~~~~-----~~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~~~ 74 (319)
T d1afsa_ 3 SISLRVALNDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGTV 74 (319)
T ss_dssp GGGCEEECTTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTSC
T ss_pred ccCceEECCCcCEEcCEeeECCCCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHhhhhhccc
Confidence 46777777999999999999997543 4778999999999999999999999998 89999999975 5
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCHH
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIE 141 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~ 141 (273)
.|+.+++.+|..... .+++.++.++++||+|||+||||+|++|+|+. ..+++
T Consensus 75 ~~~~~~~~~~~~~~~---------~~~~~~~~s~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (319)
T d1afsa_ 75 KREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDIC 145 (319)
T ss_dssp CGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHH
T ss_pred cceeeeecccccccc---------cchhhHHHHHHHHHhhcCCcccceeEeccccCCCCCccccCccccccccccCCCHH
Confidence 788999999986543 45788999999999999999999999999864 23478
Q ss_pred HHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--C--ceEEeeecccccccccccHHHHHHHhCCeEEecccCCCcc
Q 024050 142 ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--P--ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 142 ~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~--~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
+++++|++|+++||||+||+||++++.++++++.. + +.++|+.+++... +.+++++|+++||++++|+||++|.
T Consensus 146 e~~~~l~~l~~~Gkir~iGvSn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~i~i~a~spl~~G~ 223 (319)
T d1afsa_ 146 DTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN--QSKMLDYCKSKDIILVSYCTLGSSR 223 (319)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSCCC
T ss_pred HHHHHHHHHHHcCCEEEEeeccccHHHHHHHHHhhcccccccccccchhhccc--hHHHhHHHHHcCceecccccccccc
Confidence 99999999999999999999999999999987763 3 3445555555444 4789999999999999999999998
Q ss_pred CCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 218 FGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 218 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.......... ........+++.++++|++|+||+|++++|.+ +++|
T Consensus 224 ~~~~~~~~~~~-------~~~~~~~~~la~~~g~s~aqlAL~w~l~~~~~--~I~G 270 (319)
T d1afsa_ 224 DKTWVDQKSPV-------LLDDPVLCAIAKKYKQTPALVALRYQLQRGVV--PLIR 270 (319)
T ss_dssp CTTTSCTTSCC-------GGGCHHHHHHHHHTTCCHHHHHHHHHHHTTCE--EEEC
T ss_pred ccCccCcCCch-------hhhHHHHHHHHHHHCCCHHHHHHHHHHHCCCE--EEEC
Confidence 88652222110 11123456899999999999999999999975 5555
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-49 Score=343.90 Aligned_cols=235 Identities=24% Similarity=0.290 Sum_probs=200.8
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCCC
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPRE 83 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r~ 83 (273)
..+| ++|++||.||||||.+|. .+++++.++|++|++.|||+||||+.|| ||+.+|++|+. .+|+
T Consensus 2 ~~~l-~~G~~ip~lGlGt~~~g~-----~~~~~~~~~l~~A~d~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~~~ 72 (315)
T d1s1pa_ 2 CVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKRE 72 (315)
T ss_dssp EEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGG
T ss_pred eEEC-CCCCeecceeeecCCCCC-----CCHHHHHHHHHHHHHcCCCEEEcCCccC---CHHHHHHHHHHHHHhcccccc
Confidence 3678 999999999999998653 4789999999999999999999999998 89999999985 5799
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-------------------CCHHHHH
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-------------------VPIEETI 144 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-------------------~~~~~~~ 144 (273)
++++.||..... .+++.+++++++||+||++||||+|++|+|+.. .++.++|
T Consensus 73 ~~~~~t~~~~~~---------~~~~~v~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (315)
T d1s1pa_ 73 DIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTW 143 (315)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHH
T ss_pred cccccccccccc---------CCccchhhhHHHHHHhhCCCchhhccccCCCCCCcccccCccccccccccccccHHHHH
Confidence 999999987544 569999999999999999999999999999652 3467899
Q ss_pred HHHHHHHHcCCccEEecCCCCHHHHHHHhhc----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 145 GEMKKLVEEGKIKYIGLSEASPGTIRRAHAV----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 145 ~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
++|++|+++|+||+|||||+++++++++++. ..+.++|+.++++.+. .+++++|+++||++++|+||++|.+..
T Consensus 144 ~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~i~v~a~~pl~~g~~~~ 221 (315)
T d1s1pa_ 144 EAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKR 221 (315)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTT
T ss_pred HHHHHHHHcCcccccCCCCCCHHHHHHHHHhhccccCcchhhccccccccH--HHHHHHHHHcCCccccccccccccccc
Confidence 9999999999999999999999999998765 4567889998887764 679999999999999999999998876
Q ss_pred CCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 221 KAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
........ ......+.++|.+||+|++|+||+|++++|.| +++|
T Consensus 222 ~~~~~~~~-------~~~~~~~~~la~~~g~s~aq~Alaw~l~~~~~--vI~G 265 (315)
T d1s1pa_ 222 WVDPNSPV-------LLEDPVLCALAKKHKRTPALIALRYQLQRGVV--VLAK 265 (315)
T ss_dssp TSCTTSCC-------GGGCHHHHHHHHHHTSCHHHHHHHHHHHTTCE--EEEE
T ss_pred cccccchh-------hhHHHHHHHHHHHhCCCHHHHHHHHHHhCCCE--EEEC
Confidence 43222111 11133467899999999999999999999975 5544
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-48 Score=341.01 Aligned_cols=234 Identities=24% Similarity=0.322 Sum_probs=198.3
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
|.+|.+++||++||.||||||++ +++++.++|++|+++|||+||||+.|| ||+.+|++|++ ..
T Consensus 1 ~~~r~~~~tG~~vs~iglGtw~~--------~~~~~~~~i~~A~~~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~ 69 (314)
T d1us0a_ 1 MASRILLNNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (314)
T ss_dssp CCSEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CCCceECCCcCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHhhhhccccc
Confidence 78999999999999999999863 689999999999999999999999998 89999999986 34
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEE 142 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~ 142 (273)
|.++.+.++.... ..+++.+.+++++||+||++||||+|++|+|+. ..+.++
T Consensus 70 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~SL~rl~~d~idl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (314)
T d1us0a_ 70 REELFIVSKLWCT---------YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (314)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred ccccccccccccc---------cccchhhHHHHHHHhhhcCCCceeeeeeccCCCCCcccccCCcccccccCCCCCCHHH
Confidence 5666666665433 356899999999999999999999999999853 245789
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+|++|++|+++|+||+||+||++++++++++.. ..+.++|+.+|....+ .+++++|+++||++++|+||++|.+
T Consensus 141 ~~~~L~~lk~~G~Ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~~i~~~~~~pl~~g~~ 218 (314)
T d1us0a_ 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (314)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHcCCeeEeeccCCCHHHHHHHHHhccCCcCchhhhhhcchhhhH--HHHHHHHHHcCCeeeccCccccccc
Confidence 999999999999999999999999999988765 3567788888876654 6799999999999999999999988
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+....... ......+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 219 ~~~~~~~~~--------~~~~~~l~~ia~~~g~s~aq~al~~~l~~~~v--vI~G 263 (314)
T d1us0a_ 219 PWAKPEDPS--------LLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLV--VIPK 263 (314)
T ss_dssp TTCCTTSCC--------TTTCHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred cccCcccch--------hhhhhHHHHHHHHhCCCHHHHHHHHHHhCCCE--EEEC
Confidence 875322211 11134577899999999999999999999986 6665
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Probab=100.00 E-value=6.5e-49 Score=344.84 Aligned_cols=238 Identities=25% Similarity=0.366 Sum_probs=200.6
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------C
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------L 80 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~ 80 (273)
|||+++| +||++||+||||||++ +.+++.++|+.|+++|||+||||+.|| ||+++|++|++ .
T Consensus 1 ~~p~~~L-~sG~~vs~lg~Gt~~~--------~~~ea~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~l~~~~~~~~~ 68 (319)
T d1mi3a_ 1 SIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLV 68 (319)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEc-CCCCEeccceeECCCC--------ChHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHHHhhhccc
Confidence 6899999 6999999999999975 578999999999999999999999998 89999999985 4
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC------------------------
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT------------------------ 136 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~------------------------ 136 (273)
.+.++.+.+|.... ..+++.+++++++||+||++||||+|++|+|..
T Consensus 69 ~~~~~~~~~~~~~~---------~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (319)
T d1mi3a_ 69 KREEIFLTSKLWNN---------YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVY 139 (319)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCB
T ss_pred cccccccccccccc---------cccchhhhhhhHHHHhhccccchhhhhccCccccccccccccCCccccccccccccC
Confidence 46667777776533 357999999999999999999999999998732
Q ss_pred -CCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccC
Q 024050 137 -SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 137 -~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl 213 (273)
+.++++++++|++|+++||||+||+||++++++.+++.. ..+.++|.+|++++++ .+++++|+++++++++|+||
T Consensus 140 ~~~~~~e~~~~l~~l~~~Gkir~iG~S~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~~i~~~a~~pl 217 (319)
T d1mi3a_ 140 EDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSF 217 (319)
T ss_dssp CCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEeecccCCCchHHHHHHHhhcCCCchhhhccccccccc--HHHHHHHHHhhccceeccCC
Confidence 355789999999999999999999999999998887765 4568999999999985 67999999999999999999
Q ss_pred CCccCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 214 GRGFFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 214 ~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.|.++............ ....+.++++|.+|++|++|+||+|++++|.+ +++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~ia~~~~~s~aq~AL~wvl~~~~~--~I~G 271 (319)
T d1mi3a_ 218 GPQSFVEMNQGRALNTPT----LFAHDTIKAIAAKYNKTPAEVLLRWAAQRGIA--VIPK 271 (319)
T ss_dssp TTHHHHTTTCHHHHTSCC----TTSCHHHHHHHHHHTCCHHHHHHHHHHTTTCE--ECCC
T ss_pred cccccccccccccccchh----hhhHHHHHHHHHHHCcCHHHHHHHHHHhCCCE--EEeC
Confidence 999887643221111111 11234578999999999999999999999954 6766
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-48 Score=335.89 Aligned_cols=223 Identities=26% Similarity=0.295 Sum_probs=193.9
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQV 87 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i 87 (273)
..+| ++|.+||+||||||++ +++++.++|++|+++|||+||||+.|| ||+.+|++|+. .+|++++|
T Consensus 5 ~~~l-n~G~~ip~ig~G~~~~--------~~~ea~~~l~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~~~~~i 72 (274)
T d1mzra_ 5 VIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELFI 72 (274)
T ss_dssp EEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCEE
T ss_pred EEEC-CCCCcccCeeEECCCC--------CHHHHHHHHHHHHHcCCCEEECcCccC---CHHHHHHHhhccccccccccc
Confidence 4788 9999999999999864 679999999999999999999999998 89999999986 56899999
Q ss_pred EeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCC-CHHHHHHHHHHHHHcCCccEEecCCCCH
Q 024050 88 ATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEASP 166 (273)
Q Consensus 88 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~-~~~~~~~~L~~l~~~G~ir~iGvS~~~~ 166 (273)
+||..... ++.+.+++++||+||++||||+|++|+|+... ...++|++|++|+++|+||+||+|||+.
T Consensus 73 ~tk~~~~~-----------~~~~~~~~~~Sl~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~i~~iGvs~~~~ 141 (274)
T d1mzra_ 73 TTKLWNDD-----------HKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQI 141 (274)
T ss_dssp EEEECGGG-----------TTCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred cccccccc-----------chhHHHHHHHHHHhcCCCeEEEEEecCCCccchhHHHHHHHHHHHHHCCCEEEEeeccccc
Confidence 99986543 56689999999999999999999999998664 4567999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHHHHH
Q 024050 167 GTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQEYL 246 (273)
Q Consensus 167 ~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (273)
+.+.++++...+..+|..+++.....+..++++|+++||+|++|+||++|.... .....++++|
T Consensus 142 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~a~~pl~~G~~~~----------------~~~~~l~~ia 205 (274)
T d1mzra_ 142 HHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGV----------------FDQKVIRDLA 205 (274)
T ss_dssp HHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTTTCTTT----------------TTSHHHHHHH
T ss_pred hHHHHHHHhcCCCceeeehhhcccccchhhhhhhhhcceeEEEcChhhcCCCcc----------------chhHHHHHHH
Confidence 999998888666666777777776656889999999999999999999984321 1123467899
Q ss_pred HhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 247 FSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 247 ~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|+|++|+||+|++++|.| +++|
T Consensus 206 ~~~g~t~aq~Al~w~l~~~~v--~I~G 230 (274)
T d1mzra_ 206 DKYGKTPAQIVIRWHLDSGLV--VIPK 230 (274)
T ss_dssp HHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHhCCCHHHHHHHHHhcCCCE--EEEC
Confidence 999999999999999999986 5555
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=6.7e-47 Score=332.70 Aligned_cols=231 Identities=25% Similarity=0.359 Sum_probs=195.8
Q ss_pred cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-------CCC
Q 024050 10 RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-------LPR 82 (273)
Q Consensus 10 ~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-------~~r 82 (273)
.++| |||++||.||||||++ +++++.++|++|++.|||+||||+.|| ||+++|++|++ .+|
T Consensus 4 ~~~l-ntG~~is~lglGtw~~--------~~~~a~~~l~~A~~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~~r 71 (324)
T d1hqta_ 4 CVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKYALTVGYRHIDCAAIFG---NELEIGEALQETVGPGKAVPR 71 (324)
T ss_dssp EEEC-TTSCEEESBCBBCTTC--------CTTTHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHTTTBSSSSSBCG
T ss_pred EEEC-CCcCEehhheeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhcccceeec
Confidence 3555 9999999999999863 567899999999999999999999998 89999999985 568
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCHHHH
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEET 143 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~ 143 (273)
+++++.+|..... .+++.+++++++||+||++||||++++|+|+. ..+++++
T Consensus 72 ~~~~~~~~~~~~~---------~~~~~~~~~~~~SL~rl~~d~idl~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 142 (324)
T d1hqta_ 72 EELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDT 142 (324)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSCBCCSSCSSCEETTTEECBCCCCHHHH
T ss_pred cccccCccccccc---------chhHHHHHHHHHHHhccccceeeeecccCCcccccCCCcccccccccccccccchhhH
Confidence 8889998876443 56999999999999999999999999999864 3568899
Q ss_pred HHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
+++|++|+++|+||+||+||++++++.++.... .+.++|..++.... ..+++++|+++||++++|+||++|.++.+
T Consensus 143 ~~al~~l~~~G~Ir~iG~Sn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~gi~~~~~~pl~~g~~~~~ 220 (324)
T d1hqta_ 143 WKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCQARGLEVTAYSPLGSSDRAWR 220 (324)
T ss_dssp HHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCTTCSSC
T ss_pred HHHHHHHHHcCCeeeecccCCCHHHHHHHhhhcccCccccccccchhhh--hHHHHHHHHHcCCCcccccCccccccccc
Confidence 999999999999999999999999999988875 45666666666554 36899999999999999999999998876
Q ss_pred CCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 222 AVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+..... ......++++|.++|+|++|+||+|++++|.+ +++|
T Consensus 221 ~~~~~~--------~~~~~~l~~lA~~~g~s~aq~ALaw~l~~~~~--~I~G 262 (324)
T d1hqta_ 221 DPNEPV--------LLEEPVVQALAEKYNRSPAQILLRWQVQRKVI--CIPK 262 (324)
T ss_dssp CCCSCC--------STTCHHHHHHHHHTTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred cccchh--------hhcchHHHHHHHHhCcCHHHHHHHHHHcCCCE--EEEC
Confidence 332211 11123577899999999999999999999975 5555
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.2e-46 Score=325.66 Aligned_cols=234 Identities=22% Similarity=0.290 Sum_probs=193.3
Q ss_pred CcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCC
Q 024050 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (273)
Q Consensus 9 ~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r 82 (273)
.+.+| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|++ ..|
T Consensus 2 ~~~~l-~tg~~ip~iGlGtw~~--------~~~~a~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~L~~~~~~~~~~~ 69 (315)
T d1frba_ 2 TFVEL-STKAKMPIVGLGTWKS--------PPNQVKEAVKAAIDAGYRHIDCAYAYC---NENEVGEAIQEKIKEKAVQR 69 (315)
T ss_dssp CEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CEEEC-CCCCcccccceECCCC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHHhccccc
Confidence 46788 9999999999999864 689999999999999999999999999 79999999875 467
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCHHHH
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEET 143 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~~ 143 (273)
++.++.+|..+.. .+++.+++++++||+||+++|+|+|++|+|+. ..+++++
T Consensus 70 ~~~~~~~~~~~~~---------~~~~~v~~~~~~sL~rl~~~~iD~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 140 (315)
T d1frba_ 70 EDLFIVSKLWPTC---------FEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLEA 140 (315)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSSCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred ccccccccccccc---------cchHHHHHHHHHhhhcccchhhhhhhccCCCCCCCcccccccccccccccccCCHHHH
Confidence 7888888876443 56899999999999999999999999999863 2447899
Q ss_pred HHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
+++|++|+++|+||+||+||++++.++++++.. .....+.++++..+..+..++++|+++||++++|+||++|.+...
T Consensus 141 ~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~pl~~g~~~~~ 220 (315)
T d1frba_ 141 WEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDRPSA 220 (315)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCCTTSTTC
T ss_pred HHHHHHHHHCCCccccccccccHHHHHHHHHHhhhcccccccccccCchhhhHHHHHHHHHcCCcccccccccccccccc
Confidence 999999999999999999999999999988762 223334444444444457899999999999999999999988765
Q ss_pred CCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 222 AVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
...... .......++++.+||+|++|+||+|+|++|.| +++|
T Consensus 221 ~~~~~~--------~~~~~~~~~~a~~~g~s~aqvALaw~l~~~~v--vI~G 262 (315)
T d1frba_ 221 KPEDPS--------LLEDPKIKEIAAKHEKTSAQVLIRFHIQRNVV--VIPK 262 (315)
T ss_dssp CTTSCC--------TTTCHHHHHHHHHTTCCHHHHHHHHHHTTTCE--ECCB
T ss_pred ccccch--------hhHHHHHHHHHHHcCCCHHHHHHHHHHHCCCE--EEEC
Confidence 222111 11134567899999999999999999999976 5665
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.5e-46 Score=323.24 Aligned_cols=224 Identities=25% Similarity=0.369 Sum_probs=192.5
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------C
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------L 80 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~ 80 (273)
++|+++| +||++||+||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 1 ~ip~~~l-~tG~~vs~iglGt~~~--------~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~~G~~l~~~~~~~~~ 68 (284)
T d1vp5a_ 1 QVPKVTL-NNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIV 68 (284)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEEcCcccC---CHHHHHHHHHhhhccccc
Confidence 3688999 6999999999999975 578999999999999999999999999 79999999976 4
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEe
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 160 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG 160 (273)
.|+++++.+|..... .+++.+++++++||+||++||||++++|+|+ .+.++++++|++|+++||||+||
T Consensus 69 ~~~~~~i~~~~~~~~---------~~~~~~~~~~~~SL~rL~~d~iD~~~~H~p~--~~~~~~~~al~~l~~~GkIr~iG 137 (284)
T d1vp5a_ 69 RREELFVTTKLWVSD---------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPF--GDVHCAWKAMEEMYKDGLVRAIG 137 (284)
T ss_dssp CGGGCEEEEEECGGG---------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSC--SCHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccccccccccccccc---------cCcHHHHHHHHHHHHHhccCchhhhhccccc--cchhhHHHHHHHHhhCCeEeEEe
Confidence 688999999986543 5689999999999999999999999999986 46789999999999999999999
Q ss_pred cCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccC
Q 024050 161 LSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRRE 238 (273)
Q Consensus 161 vS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~ 238 (273)
+|||+++++.+++... .+..+|+.++.++.. ..++++|.++|+.+++|+|+..+... ...
T Consensus 138 vSn~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~g~~~~~~~p~~~~~~~----------------~~~ 199 (284)
T d1vp5a_ 138 VSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGRKN----------------IFQ 199 (284)
T ss_dssp EESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGGGG----------------GGG
T ss_pred eccCCHHHHHHHHhhccCCCchhhhhhhhhhhh--HHHHHHHHHcCCcccccCCccccccc----------------ccc
Confidence 9999999999887764 456666666666554 67899999999999999998754211 112
Q ss_pred chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 239 PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 239 ~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
...++++|.++|.+++|+||+|++++|.+ +++|
T Consensus 200 ~~~l~~ia~~~g~s~~q~al~w~l~~~~v--~I~G 232 (284)
T d1vp5a_ 200 NGVLRSIAEKYGKTVAQVILRWLTQKGIV--AIPK 232 (284)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCCcE--EEEC
Confidence 34578899999999999999999999975 5666
|
| >d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: L-Ala-D/L-Glu epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=89.72 E-value=2.9 Score=31.82 Aligned_cols=157 Identities=8% Similarity=0.078 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC---cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN---ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g---~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
++++..+.++.+++.|++.|=.=- |.. ...+.+. .+++.--+++.|..=... .++.+.. .
T Consensus 15 ~pe~~~~~a~~~~~~G~~~~Kiki--g~~~~~~d~~~i~-~ir~~~g~~~~i~vD~N~----------~~~~~~a----~ 77 (234)
T d1jpma1 15 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARIQ-EIRKRVGSAVKLRLDANQ----------GWRPKEA----V 77 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC--SSSCHHHHHHHHH-HHHHHHGGGSEEEEECTT----------CSCHHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEC--CCCCHHHHHHHHH-HHHHHcCchhhhhhhccc----------ccchHHH----H
Confidence 579999999999999999664321 111 1112222 222211123333322211 2344332 3
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccc-cc
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IE 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~-~~ 193 (273)
+.++.|....++++.+..|-... .++.+.++++.-.+. ..|=+.++...+.++++...++++|+..+..--- .-
T Consensus 78 ~~~~~le~~~~~i~~~EeP~~~~----d~~~~~~l~~~~~~pia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~ 153 (234)
T d1jpma1 78 TAIRKMEDAGLGIELVEQPVHKD----DLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGA 153 (234)
T ss_dssp HHHHHHHHTTCCEEEEECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHHhccCceeeecCCcccc----CHHHHHHhhccccceeecccccccchhhhhhhccCCcCeEEEeeecCCCHHHH
Confidence 33444443346788888886543 356777887775554 4466678889999999888889999977654321 12
Q ss_pred ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+.+.|+++|+.++..+.++++
T Consensus 154 ~~i~~~a~~~g~~~~~~~~~~~~ 176 (234)
T d1jpma1 154 EKINAMAEACGVECMVGSMIETK 176 (234)
T ss_dssp HHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHhcCeeEeecccccCC
Confidence 67889999999999887766544
|
| >d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Amycolatopsis sp. [TaxId: 37632]
Probab=89.53 E-value=1.3 Score=34.12 Aligned_cols=154 Identities=10% Similarity=0.043 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+++.|++.|=.-- |....-+.+ +++++.-.+++.|..-.... ++.+...+ +
T Consensus 16 ~~~~~~~~~~~~~~~Gf~~~Kikv--g~~~Di~~i-~~ir~~~g~~~~l~vDaN~~----------~~~~~a~~-~---- 77 (242)
T d1sjda1 16 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPV-RAVRERFGDDVLLQVDANTA----------YTLGDAPQ-L---- 77 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHH-HHHHHHHCTTSEEEEECTTC----------CCGGGHHH-H----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEC--CchhHHHHH-HHHHHHhCCCeeEeeccccc----------cchhhhhH-H----
Confidence 678899999999999999743321 222333333 34443223455555443221 23333222 2
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-cccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~l 196 (273)
.+| +..+++++..|-...+ +..+.++++...+. ..|=+.++...+.++++...++++|+..+..---. -..+
T Consensus 78 ~~l--~~~~~~~iEeP~~~~d----~~~~~~l~~~~~~pia~gE~~~~~~~~~~~~~~~~~d~~~~d~~~~GGit~~~~i 151 (242)
T d1sjda1 78 ARL--DPFGLLLIEQPLEEED----VLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 151 (242)
T ss_dssp HTT--GGGCCSEEECCSCTTC----HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhh--hhhhhHHHHhhhhhhh----HHHHHHHHhccCcccccccccccchhhhhhhhcCccCEEEeccccCccchhhhHH
Confidence 233 3455667777754433 46677888777765 23445688899999999988999999877654211 1678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
.+.|+++|+.+...+.+..+
T Consensus 152 ~~~A~~~~i~~~~h~~~~~~ 171 (242)
T d1sjda1 152 HDVCAAHGIPVWCGGMIETG 171 (242)
T ss_dssp HHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHCCCEEeecccccch
Confidence 89999999999988776544
|
| >d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Probab=88.13 E-value=3.6 Score=32.08 Aligned_cols=103 Identities=12% Similarity=0.012 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc----CC-c-cEEecCCCCHHHHHHHhhcCCc
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-I-KYIGLSEASPGTIRRAHAVHPI 178 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~----G~-i-r~iGvS~~~~~~l~~~~~~~~~ 178 (273)
++++...+-+. .|++...+| ++ ++..|-...+..+.++.|.++++. |- | -..+=|-++++.+.++++..-.
T Consensus 89 ~~~~eai~~~~-~L~~~~~~y-~i-~iEqP~~~~d~~~~~e~~a~lr~~~~~~g~~vpI~~DE~~~~~~d~~~~i~~~a~ 165 (253)
T d1kcza1 89 VDIKAMADYIQ-TLAEAAKPF-HL-RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAG 165 (253)
T ss_dssp TCHHHHHHHHH-HHHHHHTTS-CE-EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHH-HHHHhcCCC-Cc-eEecCCCCccHhhHHHHHHHHHHHHhccCCccceeccccccCHHHHHHHHHhCCc
Confidence 45555544333 344455566 45 688887777777788888888765 22 2 2234466788999999998888
Q ss_pred eEEeeecccccccc-cccHHHHHHHhCCeEEec
Q 024050 179 TAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 179 ~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~ 210 (273)
+++|+..+-+---. ..+++..|+++|+.++.-
T Consensus 166 d~v~iK~~k~GGi~~al~~~~~a~~~Gi~~~vg 198 (253)
T d1kcza1 166 HMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 198 (253)
T ss_dssp SEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred CeeeccccccCCHHHHHHHHHHHHHcCCcEEEc
Confidence 99999888654321 277999999999998864
|
| >d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Deinococcus radiodurans [TaxId: 1299]
Probab=87.96 E-value=2.7 Score=32.20 Aligned_cols=152 Identities=14% Similarity=0.143 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|=.- .|.+...+.+. ++++ .+ ++.|..=... .++.+...+
T Consensus 16 ~~e~~~~~~~~~~~~G~~~~KiK--vg~~~D~~~v~-~ir~~~~--d~~l~vD~n~----------~~~~~~a~~----- 75 (243)
T d1r0ma1 16 DEQATVDLVRRHVEQGYRRIKLK--IKPGWDVQPVR-ATREAFP--DIRLTVDANS----------AYTLADAGR----- 75 (243)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEE--CBTTBSHHHHH-HHHHHCT--TSCEEEECTT----------CCCGGGHHH-----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEE--cCcchhHHHHH-HHHHhcc--CceEEEeccc----------cCchHHHHH-----
Confidence 78888999999999999876432 13333444444 4554 43 3333322211 123322221
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-ccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~ 195 (273)
++.| .-.+++++..|-+.. .++.+.++++.-.+. +.|=+.++...+..+++...++++|+..+..---. -..
T Consensus 76 ~~~l--~~~~~~~iEeP~~~~----d~~~~~~l~~~~~ipia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 149 (243)
T d1r0ma1 76 LRQL--DEYDLTYIEQPLAWD----DLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRR 149 (243)
T ss_dssp HHTT--GGGCCSCEECCSCTT----CSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHH
T ss_pred hhhh--hhccchhhhhhcccc----chHHHHHHhhcCCcccccccchhhhhhhhhhhhcccccceecccceeccHHHHHH
Confidence 2222 334566666664433 356677777765554 34556688999999999888999999887654221 167
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+.+.|+++|+.++..+.+..+
T Consensus 150 i~~~A~~~gi~v~~h~~~~~~ 170 (243)
T d1r0ma1 150 VHDVAQSFGAPVWCGGMLESG 170 (243)
T ss_dssp HHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHCCCceecccccccc
Confidence 999999999999998877654
|
| >d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Enterococcus faecalis [TaxId: 1351]
Probab=87.63 E-value=4.6 Score=30.74 Aligned_cols=152 Identities=13% Similarity=0.065 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|=.-- |++...+.+ +.+++ .+ ++.|..= .+. .++.+...+ +
T Consensus 16 ~~~~~~~~~~~~~~~G~~~~Kikv--g~~~D~~~v-~~ir~~~~--d~~l~vD--aN~--------~~~~~~a~~-~--- 76 (241)
T d1wuea1 16 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHFP--NLPLMVD--ANS--------AYTLADLPQ-L--- 76 (241)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCT--TSCEEEE--CTT--------CCCGGGHHH-H---
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEc--CccHHHHHH-HHHHHhcc--ccceeec--ccc--------cCCHHHhhh-h---
Confidence 678899999999999999764321 222333333 34554 42 2333321 111 133333221 2
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-ccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~ 195 (273)
.++. -.+++++..|-... .++.+.++++.-.+. +.|=+-++...+..+++...++++|+..+.+---. -..
T Consensus 77 -~~~~--~~~i~~iEeP~~~~----~~~~~~~l~~~~~~pIa~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~~ 149 (241)
T d1wuea1 77 -QRLD--HYQLAMIEQPFAAD----DFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALK 149 (241)
T ss_dssp -HGGG--GSCCSCEECCSCTT----CSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred -hhhh--hhhhhhhcCccccc----chhhhhhhhcccccccccCcccccchhhhhhhhhhhhhhhccccccccCcHHHHH
Confidence 3442 24666666664332 356688888877765 33556688999999999888899999766543211 267
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+.+.|+++|+.++..+.+..+
T Consensus 150 i~~~a~~~~i~v~~~~~~~~~ 170 (241)
T d1wuea1 150 IAAFCQENDLLVWLGGMFESG 170 (241)
T ss_dssp HHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHcCCEEEeccccccc
Confidence 899999999999887755544
|
| >d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Probab=87.43 E-value=3.5 Score=32.08 Aligned_cols=103 Identities=13% Similarity=0.059 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc----CC-cc-EEecCCCCHHHHHHHhhcCCc
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-IK-YIGLSEASPGTIRRAHAVHPI 178 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~----G~-ir-~iGvS~~~~~~l~~~~~~~~~ 178 (273)
++++...+.+.+ |.+...+| ++ ++..|-+....++-++.|.++.+. |. |. ..+=|-++++.+.++++..-.
T Consensus 89 ~~~~~ai~~l~~-L~~~~~~~-~l-~IEqP~~~~~~~~d~~gl~~l~~~l~~~g~~vpI~~DE~~~t~~d~~~~i~~~a~ 165 (251)
T d1kkoa1 89 MDPVRCAEYIAS-LEKEAQGL-PL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC 165 (251)
T ss_dssp TCHHHHHHHHHH-TGGGGTTS-CE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHH-HHHhcCCC-ce-eecCCcccccchHHHHHHHHHHHHHhccCCCceEeccceeCCHHHHHHHHHhCCc
Confidence 445544444433 23333355 45 688886666667777777777654 43 32 224455788889999998888
Q ss_pred eEEeeeccccccccc-ccHHHHHHHhCCeEEec
Q 024050 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 179 ~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
+++|+..+-+---.+ .+++..|+++|+.++.-
T Consensus 166 d~v~iK~~k~GGi~~a~~~~~~A~~~Gi~~~~g 198 (251)
T d1kkoa1 166 HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQG 198 (251)
T ss_dssp SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEEC
T ss_pred cceeccccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 999998887553222 77999999999998754
|
| >d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Alcaligenes eutrophus [TaxId: 106590]
Probab=86.43 E-value=4.2 Score=31.15 Aligned_cols=157 Identities=9% Similarity=0.037 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc-HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA-NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~-se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
++++..+.++...+.|++.|=.--....-. ..+.+ +++++.-.+++.|..-... .++.+...+-+ +.
T Consensus 17 ~~~~~~~~~~~~~~~Gf~~~KiKvG~~~~~~D~~~v-~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~ 84 (244)
T d2chra1 17 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHM-EALSNSLGSKAYLRVDVNQ----------AWDEQVASVYI-PE 84 (244)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHH-HHHHHHTTTTSEEEEECTT----------CCCTHHHHHHH-HH
T ss_pred cHHHHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHH-HHHHHhcCCCceEEEeCCC----------CcchHHHHHHH-HH
Confidence 567778888888888999776532111101 11223 3444422334444443222 13444444333 23
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccc-cccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IEEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~-~~~~ 195 (273)
|+.+ +++++..|-... -++.+.+|++.-.+. ..|=+-++.+.+.++++....+++|+..+..--- .-..
T Consensus 85 l~~~-----~i~~iEeP~~~~----d~~~~~~l~~~~~ipia~~E~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 155 (244)
T d2chra1 85 LEAL-----GVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQK 155 (244)
T ss_dssp HHTT-----TCCEEECCSCSS----CHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHH
T ss_pred Hhhh-----hHHHHhhhhhhc----cchhhhhhccceeeeeeecccccccchhhhhhhcceeEEEeeccccccchHHHHH
Confidence 4444 456677664433 356777888776654 3455668889999999988889999877665321 1277
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+....+
T Consensus 156 i~~~a~~~gi~~~~~~~~~~~ 176 (244)
T d2chra1 156 IAAVAEASGIASYGGTMLDST 176 (244)
T ss_dssp HHHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHHcCCCeeeccccccc
Confidence 999999999998877666544
|
| >d1jdfa1 c.1.11.2 (A:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: D-glucarate dehydratase species: Escherichia coli [TaxId: 562]
Probab=85.44 E-value=1.8 Score=34.84 Aligned_cols=158 Identities=13% Similarity=0.111 Sum_probs=93.2
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.++++..+..+++++. |++.|=.=-.-.....+...=+++++ .+..++.|=.-. .++.+ ++++
T Consensus 46 ~~p~~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avr~~~pd~~l~vDaN~------------~~s~~---~Ai~ 110 (309)
T d1jdfa1 46 MTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNG------------AWSLN---EAIK 110 (309)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEECTT------------BBCHH---HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHHHHHHCCCCeEEeeccC------------CCCHH---HHHH
Confidence 4678888888888887 99876321100011222223334444 544444442211 13443 3333
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeecccccccccc
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEE 194 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~ 194 (273)
..+.|. + +++++..|-...+.....+.+.+++++-.| -+.|=+.++...+..+++...++++|..-...--..-.
T Consensus 111 -~~~~le--~-~l~w~EEPv~~~d~~~~~~~l~~lr~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~~~ 186 (309)
T d1jdfa1 111 -IGKYLK--G-SLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSV 186 (309)
T ss_dssp -HHHHTT--T-TCSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred -HHHHHh--h-cchhhhhhcccCcchhhHHHHHHhhcccccceecCcccchhhhhhhhhhhccceeeecccccccchHHH
Confidence 344553 3 566677764433333456777888877555 35677778999999999888888888764321111126
Q ss_pred cHHHHHHHhCCeEEecccCC
Q 024050 195 EIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~ 214 (273)
.+...|+++|+.+...+...
T Consensus 187 kia~lA~~~gi~v~~H~~~~ 206 (309)
T d1jdfa1 187 RVAQMCHEFGLTWGSHSDNH 206 (309)
T ss_dssp HHHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHhcCCCccccCCCC
Confidence 78899999999998775543
|
| >d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Listeria innocua [TaxId: 1642]
Probab=83.96 E-value=6.4 Score=29.96 Aligned_cols=152 Identities=15% Similarity=0.135 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|=.- -|+...-+.+ +++++ .+ ++.+..=. +. .++.+... .
T Consensus 16 ~~e~~~~~~~~~~~~Gf~~~Kik--vg~~~D~~~v-~~ir~~~~--~~~l~vDa--N~--------~~~~~~a~-~---- 75 (244)
T d1wufa1 16 NVETLLQLVNQYVDQGYERVKLK--IAPNKDIQFV-EAVRKSFP--KLSLMADA--NS--------AYNREDFL-L---- 75 (244)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEE--CBTTBSHHHH-HHHHTTCT--TSEEEEEC--TT--------CCCGGGHH-H----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEE--eCCcHHHHHH-HHHHHhcc--chhhhhhh--hc--------cccchhhh-h----
Confidence 68899999999999999975432 1333333444 45665 43 34443221 11 13333322 1
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeecccccccc-ccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~ 195 (273)
+++| +..+++++..|-...+ ++.+.++++.-.+.- .|=+.++...+.++++..-++++|+..+..---. -..
T Consensus 76 ~~~l--~~~~~~wiEeP~~~~d----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~k 149 (244)
T d1wufa1 76 LKEL--DQYDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALK 149 (244)
T ss_dssp HHTT--GGGTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHH
T ss_pred hhcc--cccchhhhcCcccccc----hhhhhccccccccccccCccccchhhhhhhccccccceeecccccccchhhHHH
Confidence 2333 3456677777754433 556778888766542 3556688999999999888899998777654321 167
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+.+.|.++|+.+...+.+..+
T Consensus 150 i~~~a~~~gi~v~~h~~~~~~ 170 (244)
T d1wufa1 150 IAEYCALNEILVWCGGMLEAG 170 (244)
T ss_dssp HHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHcCCEEecCCCCCcc
Confidence 889999999999987655443
|
| >d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Pseudomonas sp. p51 [TaxId: 65067]
Probab=83.89 E-value=7.4 Score=29.61 Aligned_cols=157 Identities=10% Similarity=0.032 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++...+.|++.|=.--.... ....+.+ +.+++.-.+++.|..=... .++.+...+-+ +.
T Consensus 17 ~~~~~~e~~~~~~~~G~~~~KiKvG~~~~~~Di~~v-~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~ 84 (243)
T d1nu5a1 17 TARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHI-RSIVKAVGDRASVRVDVNQ----------GWDEQTASIWI-PR 84 (243)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHH-HHHHHHHGGGCEEEEECTT----------CCCHHHHHHHH-HH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEeCCCCHHHHHHHH-HHHHHHhCcccceEEECCC----------CccchhHHHHH-HH
Confidence 5677777777777889998765321110 0111222 2333311234444433221 23455444322 33
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccc-cccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD-IEEE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~-~~~~ 195 (273)
|+.+ +++++..|-+..+ ++.+.+|++.-.+. ..|=+.++...+..+++..-++++|+..+..--- .-..
T Consensus 85 l~~~-----~~~~iEeP~~~~~----~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~ 155 (243)
T d1nu5a1 85 LEEA-----GVELVEQPVPRAN----FGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLK 155 (243)
T ss_dssp HHHH-----TCCEEECCSCTTC----HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred hcch-----hhhhhhhhhhhcc----ccccccchhccccccccccccccchhhhhccccccccccccccccccchHHHHH
Confidence 4444 4556666654333 56778888777654 2355668899999999988888999877655321 1167
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+.+||.+...+.+..+
T Consensus 156 i~~~a~~~gi~~~~~~~~~s~ 176 (243)
T d1nu5a1 156 VAAVAEAAGISSYGGTMLDST 176 (243)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCCcccccccchh
Confidence 899999999999887777654
|