Citrus Sinensis ID: 024082
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 272 | ||||||
| 224104535 | 359 | predicted protein [Populus trichocarpa] | 0.974 | 0.738 | 0.661 | 1e-104 | |
| 356525612 | 343 | PREDICTED: protein N-terminal asparagine | 0.981 | 0.778 | 0.663 | 1e-101 | |
| 359487457 | 363 | PREDICTED: protein N-terminal asparagine | 0.988 | 0.741 | 0.663 | 8e-97 | |
| 449463783 | 347 | PREDICTED: protein N-terminal asparagine | 0.985 | 0.772 | 0.619 | 2e-94 | |
| 297741220 | 339 | unnamed protein product [Vitis vinifera] | 0.900 | 0.722 | 0.682 | 2e-93 | |
| 357451021 | 384 | Protein N-terminal asparagine amidohydro | 0.908 | 0.643 | 0.642 | 4e-90 | |
| 147768910 | 375 | hypothetical protein VITISV_024457 [Viti | 0.944 | 0.685 | 0.626 | 1e-88 | |
| 297824457 | 348 | N-terminal asparagine amidohydrolase fam | 0.992 | 0.775 | 0.605 | 3e-88 | |
| 18406532 | 347 | protein N-terminal asparagine amidohydro | 0.988 | 0.775 | 0.612 | 2e-87 | |
| 21554202 | 347 | unknown [Arabidopsis thaliana] | 0.988 | 0.775 | 0.612 | 2e-87 |
| >gi|224104535|ref|XP_002313470.1| predicted protein [Populus trichocarpa] gi|222849878|gb|EEE87425.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/272 (66%), Positives = 221/272 (81%), Gaps = 7/272 (2%)
Query: 1 MIFVGGLPFSTNNSSWSSSSSQGSDILVALLEHPVLVSASHSFKSMEETKVSVSSETPSP 60
MIFV GL F T+ SSQ LV LLEHP LVSAS+SF++M+E K+S S E
Sbjct: 1 MIFVDGLTFPTD-------SSQERGALVTLLEHPKLVSASNSFEAMQEVKLSASKEYALQ 53
Query: 61 SKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDIGLCQ 120
++VYVFQRE+ATVDPAL+D++GTDEATTCVGLVIRN+RN MTS+AHMD+ ++VDIGL Q
Sbjct: 54 GRWVYVFQREFATVDPALIDFIGTDEATTCVGLVIRNQRNGMTSVAHMDSTKVVDIGLAQ 113
Query: 121 MLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRR 180
MLS+VVD + D +LDV+LIGGF+D P ANG+T SE + DGYS PLC K+++ L++
Sbjct: 114 MLSIVVDKNFDDDLDVHLIGGFEDVLPKQANGSTRSETQAKGDGYSFPLCTKIIENLRKG 173
Query: 181 QEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMVRRIR 240
+EKFH+QTL VLGHNTKRDSQGNAYP+F+GFLV+T TGS+ PASFD T+RCPDE+VRRIR
Sbjct: 174 KEKFHIQTLFVLGHNTKRDSQGNAYPVFNGFLVKTSTGSVIPASFDRTTRCPDEIVRRIR 233
Query: 241 VTSSYEDTSWNGKLLETYDTQTDRFVIAPCRW 272
+++S ED +WNGKLLETYDTQ DRFVIAPC W
Sbjct: 234 ISASNEDPTWNGKLLETYDTQNDRFVIAPCSW 265
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525612|ref|XP_003531418.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359487457|ref|XP_002268254.2| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449463783|ref|XP_004149611.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Cucumis sativus] gi|449526561|ref|XP_004170282.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297741220|emb|CBI32171.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357451021|ref|XP_003595787.1| Protein N-terminal asparagine amidohydrolase [Medicago truncatula] gi|355484835|gb|AES66038.1| Protein N-terminal asparagine amidohydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|147768910|emb|CAN75884.1| hypothetical protein VITISV_024457 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297824457|ref|XP_002880111.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325950|gb|EFH56370.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18406532|ref|NP_566017.1| protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gi|20197192|gb|AAC16088.2| expressed protein [Arabidopsis thaliana] gi|26450109|dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gi|28827584|gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gi|330255324|gb|AEC10418.1| protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21554202|gb|AAM63281.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 272 | ||||||
| TAIR|locus:2050549 | 347 | AT2G44420 "AT2G44420" [Arabido | 0.988 | 0.775 | 0.590 | 1.6e-86 | |
| ZFIN|ZDB-GENE-040426-1896 | 306 | zgc:77869 "zgc:77869" [Danio r | 0.636 | 0.565 | 0.307 | 2.2e-11 | |
| UNIPROTKB|F1PPS3 | 313 | NTAN1 "Uncharacterized protein | 0.643 | 0.559 | 0.274 | 3.9e-10 | |
| UNIPROTKB|Q28955 | 310 | NTAN1 "Protein N-terminal aspa | 0.566 | 0.496 | 0.289 | 2.9e-09 | |
| UNIPROTKB|Q96AB6 | 310 | NTAN1 "Protein N-terminal aspa | 0.566 | 0.496 | 0.278 | 3.8e-09 | |
| UNIPROTKB|E1B891 | 310 | NTAN1 "Uncharacterized protein | 0.566 | 0.496 | 0.278 | 8.9e-09 | |
| RGD|1305160 | 309 | Ntan1 "N-terminal asparagine a | 0.566 | 0.498 | 0.278 | 3.6e-08 | |
| MGI|MGI:108471 | 310 | Ntan1 "N-terminal Asn amidase" | 0.566 | 0.496 | 0.272 | 4.9e-08 | |
| FB|FBgn0034371 | 310 | SP2637 "SP2637" [Drosophila me | 0.621 | 0.545 | 0.29 | 1.9e-07 | |
| UNIPROTKB|H3BPN7 | 146 | NTAN1 "Protein N-terminal aspa | 0.382 | 0.712 | 0.271 | 6.7e-07 |
| TAIR|locus:2050549 AT2G44420 "AT2G44420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 163/276 (59%), Positives = 213/276 (77%)
Query: 1 MIFVGGLPFXXXXXXXXXXXXXX-XDILVALLEHPVLVSASHSFKSMEETKVSVS---SE 56
MI+VGG+ F +LV ++ HPV+ AS SFK++EE VS SE
Sbjct: 1 MIYVGGVQFLDESSSFSLSSSSQGSSLLVDVMSHPVITLASDSFKNLEEKNVSFDESDSE 60
Query: 57 TPSPSKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDI 116
+ + +YVY+FQRE+A V+PALVD+VGTDEATTCVGLVIRNR++ MTS+AHMD+PEIVD+
Sbjct: 61 SSTKDRYVYIFQREFAVVNPALVDFVGTDEATTCVGLVIRNRKSGMTSVAHMDSPEIVDL 120
Query: 117 GLCQMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDT 176
G+ QML LV+ D+DAELDV+++GG++D +A+G + + Y+ +GYS PLC KLV+T
Sbjct: 121 GISQMLLLVLQDDVDAELDVHMVGGYEDVDIKNADG--VGD-YAKPEGYSFPLCCKLVET 177
Query: 177 LQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMV 236
LQ+R+E FH+QTL +LGHNTK DSQ N PIF+G LV T TG++ PASF+ TSRCPDE+V
Sbjct: 178 LQKRRENFHIQTLFILGHNTKLDSQANTCPIFNGCLVNTSTGAILPASFNRTSRCPDEIV 237
Query: 237 RRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRW 272
RRIRV+SS+ED+SW GKLL+TYDT+TDRF+IAPCRW
Sbjct: 238 RRIRVSSSFEDSSWKGKLLDTYDTKTDRFIIAPCRW 273
|
|
| ZFIN|ZDB-GENE-040426-1896 zgc:77869 "zgc:77869" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PPS3 NTAN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q28955 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96AB6 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1B891 NTAN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1305160 Ntan1 "N-terminal asparagine amidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:108471 Ntan1 "N-terminal Asn amidase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| FB|FBgn0034371 SP2637 "SP2637" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H3BPN7 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 272 | |||
| PF14736 | 274 | N_Asn_amidohyd: Protein N-terminal asparagine amid | 100.0 | |
| PRK13498 | 167 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.64 | |
| PRK13490 | 162 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.63 | |
| PRK13493 | 213 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.46 | |
| PRK13497 | 184 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.37 | |
| PRK13495 | 159 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.31 | |
| PRK13494 | 163 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.23 | |
| PRK13489 | 233 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.06 | |
| PRK13491 | 199 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.83 | |
| PRK13488 | 157 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.78 | |
| COG1871 | 164 | CheD Chemotaxis protein; stimulates methylation of | 95.74 | |
| PRK13487 | 201 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.15 |
| >PF14736 N_Asn_amidohyd: Protein N-terminal asparagine amidohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-82 Score=579.75 Aligned_cols=197 Identities=40% Similarity=0.680 Sum_probs=190.7
Q ss_pred hhccCcceEeecCCCCCCCCeEEEEeceeeEEecCC--ceeeeecCCCceeeEEEEEeCCCCceEEEeccCCchhhHHHH
Q 024082 42 SFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPA--LVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDIGLC 119 (272)
Q Consensus 42 ~l~~~p~~~v~~~~e~s~~~~lLYV~QRE~A~t~P~--~V~ilGSDdATTChivVlRhtgsGat~laH~Dgs~~v~~~v~ 119 (272)
+|+++|.+.++ |+|+|||+|||||||+|+ +|+|||||||||||||||||++|||||||||||+++ +++|+
T Consensus 1 ~~~s~~~~~~~-------~~~~lYV~QrE~A~~~p~d~~v~~lGSDdATTC~ivVlRh~~sg~t~laH~Dgs~~-~~~v~ 72 (274)
T PF14736_consen 1 QFRSQPHKVVG-------PKGLLYVQQREFATTTPADKSVSILGSDDATTCHIVVLRHTGSGATCLAHLDGSDT-EEGVA 72 (274)
T ss_pred CcccCCceecC-------CCeeEEEecceeEEecCccCccceEecCCCcEEEEEEEEcCCCCcEEEEEecCCCh-hhHHH
Confidence 58999999999 999999999999999999 699999999999999999999999999999999997 99999
Q ss_pred HHHHhh---cCCCCCceeEEEEecccCCCCCCCCCCccccccccCCCCCCHHHHHHHHHHHHcccceEEEeeeEeccCCc
Q 024082 120 QMLSLV---VDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNT 196 (272)
Q Consensus 120 ~ml~~l---~~~~~~grLevhLVGGF~D~~~~~~~~~~~s~~~~~~~g~S~~L~~~LL~~f~k~~~~~hL~t~CV~~lNt 196 (272)
+|++++ +.++.++||||||||||+|+ +|||++||.+||++|||++++|||+||||+++||
T Consensus 73 ~ml~~v~~~~~~~~~~~lelhLVGGF~D~-----------------~~~S~~l~~~ll~~f~~~~~~~~L~t~Cv~~~Nt 135 (274)
T PF14736_consen 73 QMLSSVQSLSNGYPEGRLELHLVGGFDDD-----------------RGYSQKLSLNLLEAFHKQPEEIHLRTFCVTELNT 135 (274)
T ss_pred HHHHHHHhhccCCCCCceEEEEEccccCc-----------------ccchHHHHHHHHHHHHcCcceEEEEEEEEccCCC
Confidence 999996 44568999999999999999 9999999999999999999999999999999999
Q ss_pred eecCCCCCcceEEEEEEEecCCeeeccccCCCCCCchHHHhhhhhhccccCcCCCCeeEeeeeCCCCeEEEccCcC
Q 024082 197 KRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRW 272 (272)
Q Consensus 197 ~~~~~g~~~PiiyGi~VnvkTG~IfpAsF~~~~rGPde~lR~aR~~~s~~d~~~g~~l~~iYD~~~~~l~I~Pf~w 272 (272)
+++ +|++|||||||+||+|||+||||+| ++|||+|+||+||+++ |+++|+||||+++++|+|+||+|
T Consensus 136 ~~~-~g~~~Pii~Gi~VnvkTG~IfpAsF--~~rGP~~~lR~aR~~~------~~~~l~~iYD~~~~~l~I~Pf~~ 202 (274)
T PF14736_consen 136 RVE-DGIHRPIIYGIAVNVKTGEIFPASF--PDRGPDEILRSARVFT------GGGRLLNIYDTETDQLRIGPFHW 202 (274)
T ss_pred ccC-CCccCcEEEEEEEEecCCeEecccC--cccCCcHHHHHHHHhc------CCCceEEEEECCCCeEEECCCcC
Confidence 988 8999999999999999999999999 9999999999999995 79999999999999999999999
|
|
| >PRK13498 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13490 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13493 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13497 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13495 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13494 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13489 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13491 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13488 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >COG1871 CheD Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13487 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 272 | |||
| 2f9z_C | 159 | Protein (chemotaxis methylation protein); bacteria | 96.44 |
| >2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.012 Score=50.04 Aligned_cols=132 Identities=15% Similarity=0.181 Sum_probs=90.3
Q ss_pred eEEEEeceeeEEec-CC-ceee-eecCCCceeeEEEEEeCCCCceEEEecc---C-------CchhhHHHHHHHHhh-cC
Q 024082 62 KYVYVFQREYATVD-PA-LVDY-VGTDEATTCVGLVIRNRRNRMTSIAHMD---N-------PEIVDIGLCQMLSLV-VD 127 (272)
Q Consensus 62 ~lLYV~QRE~A~t~-P~-~V~i-lGSDdATTChivVlRhtgsGat~laH~D---g-------s~~v~~~v~~ml~~l-~~ 127 (272)
..++|.+.||.++. |. -..+ ||| |+.|+|+++..+.-.|+|+= . ....+.++..|++.+ ..
T Consensus 3 ~~i~v~~Ge~~v~~~p~~i~T~~LGS-----CVav~l~Dp~~~iGGm~H~mLP~~~~~~~~~~rY~d~am~~Li~~m~~~ 77 (159)
T 2f9z_C 3 MKKVIGIGEYAVMKNPGVIVTLGLGS-----CVAVCMRDPVAKVGAMAHVMLPDSGGKTDKPGKYADTAVKTLVEELKKM 77 (159)
T ss_dssp CEEECCTTCEEEEETTCEEEEEEESS-----CEEEEEEETTTTEEEEEEECBSCCSSCCSCGGGBHHHHHHHHHHHHHTT
T ss_pred cEEEEeCCeEEEECCCCEEEEecCcC-----eEEEEEEcCCCCEEEEEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHc
Confidence 45799999999876 55 3566 887 99999999999999999983 1 235678999999886 55
Q ss_pred CCCCceeEEEEecccCCCCCCCCCCccccccccCCCCCCHHHHHHHHHHHHcccceEEEeeeEeccCCceecCCCCCcce
Q 024082 128 HDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPI 207 (272)
Q Consensus 128 ~~~~grLevhLVGGF~D~~~~~~~~~~~s~~~~~~~g~S~~L~~~LL~~f~k~~~~~hL~t~CV~~lNt~~~~~g~~~Pi 207 (272)
+....+|++.|.||=.=-... .....++......+.|++.. |.+.--=+++..- .
T Consensus 78 Ga~~~~L~aKifGGA~m~~~~-------------~~~IG~rNv~~a~~~L~~~g--I~i~aeD~GG~~g----------R 132 (159)
T 2f9z_C 78 GAKVERLEAKIAGGASMFESK-------------GMNIGARNVEAVKKHLKDFG--IKLLAEDTGGNRA----------R 132 (159)
T ss_dssp TCCGGGCEEEEEECCCCSCCC-------------SSCHHHHHHHHHHHHHHHTT--CCEEEEEECCSSC----------E
T ss_pred CCCHHHEEEEEEeCcccCccc-------------ccChHHHHHHHHHHHHHHCC--CcEEEEeCCCCCC----------c
Confidence 666789999999995532100 03355566666666666644 4443333333222 1
Q ss_pred EEEEEEEecCCeeecccc
Q 024082 208 FHGFLVETCTGSLSPASF 225 (272)
Q Consensus 208 iyGi~VnvkTG~IfpAsF 225 (272)
=+-+++.||++.=-+.
T Consensus 133 --~i~f~~~tG~v~vk~~ 148 (159)
T 2f9z_C 133 --SVEYNIETGKLLVRKV 148 (159)
T ss_dssp --EEEEETTTTEEEEECC
T ss_pred --EEEEECCCCEEEEEEc
Confidence 2556888888765444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 272 | |||
| d2f9zc1 | 157 | Chemoreceptor glutamine deamidase CheD {Thermotoga | 96.33 |
| >d2f9zc1 d.194.1.3 (C:1-157) Chemoreceptor glutamine deamidase CheD {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CNF1/YfiH-like putative cysteine hydrolases superfamily: CNF1/YfiH-like putative cysteine hydrolases family: CheD-like domain: Chemoreceptor glutamine deamidase CheD species: Thermotoga maritima [TaxId: 2336]
Probab=96.33 E-value=0.04 Score=44.75 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=91.4
Q ss_pred EeceeeEEec-CC-ceee-eecCCCceeeEEEEEeCCCCceEEEeccCC----------chhhHHHHHHHHhh-cCCCCC
Q 024082 66 VFQREYATVD-PA-LVDY-VGTDEATTCVGLVIRNRRNRMTSIAHMDNP----------EIVDIGLCQMLSLV-VDHDLD 131 (272)
Q Consensus 66 V~QRE~A~t~-P~-~V~i-lGSDdATTChivVlRhtgsGat~laH~Dgs----------~~v~~~v~~ml~~l-~~~~~~ 131 (272)
|.+.||+++. |. -+.+ ||| |+.|+|.++..+.-.|+|+==| ...+.++..|++.+ ..+...
T Consensus 5 vgiGe~~v~~~~~~i~T~~LGS-----CVav~l~Dp~~~iGGm~H~mLP~~~~~~~~~~rY~d~ai~~Li~~m~~~Ga~~ 79 (157)
T d2f9zc1 5 IGIGEYAVMKNPGVIVTLGLGS-----CVAVCMRDPVAKVGAMAHVMLPDSGGKTDKPGKYADTAVKTLVEELKKMGAKV 79 (157)
T ss_dssp CCTTCEEEEETTCEEEEEEESS-----CEEEEEEETTTTEEEEEEECBSCCSSCCSCGGGBHHHHHHHHHHHHHTTTCCG
T ss_pred EEeccEEEECCCCEEEEecCcC-----eEEEEEEcCCCCEEEEEEEECCCCCCCCCchhhHHHHHHHHHHHHHHHcCCCh
Confidence 6789999985 66 3565 897 9999999999999999998222 23689999999996 456668
Q ss_pred ceeEEEEecccCCCCCCCCCCccccccccCCCCCCHHHHHHHHHHHHcccceEEEeeeEeccCCceecCCCCCcceEEEE
Q 024082 132 AELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGF 211 (272)
Q Consensus 132 grLevhLVGGF~D~~~~~~~~~~~s~~~~~~~g~S~~L~~~LL~~f~k~~~~~hL~t~CV~~lNt~~~~~g~~~PiiyGi 211 (272)
.+|++.|.||-.=-. +. .....++.....++.|++.. |.+.---+++..-+ =+
T Consensus 80 ~~l~aKifGGA~m~~-----~~--------~~~IG~rNv~~a~~~L~~~g--I~i~a~dvGG~~gR------------~i 132 (157)
T d2f9zc1 80 ERLEAKIAGGASMFE-----SK--------GMNIGARNVEAVKKHLKDFG--IKLLAEDTGGNRAR------------SV 132 (157)
T ss_dssp GGCEEEEEECCCCSC-----CC--------SSCHHHHHHHHHHHHHHHTT--CCEEEEEECCSSCE------------EE
T ss_pred HHeEEEEecCeeccC-----CC--------CCCcHHHHHHHHHHHHHHCC--CcEEEEECCCCCCc------------EE
Confidence 899999999965321 10 13456677777777777654 55555566655442 25
Q ss_pred EEEecCCeeecccc
Q 024082 212 LVETCTGSLSPASF 225 (272)
Q Consensus 212 ~VnvkTG~IfpAsF 225 (272)
.+++.||+++=-+.
T Consensus 133 ~f~~~tG~v~vk~~ 146 (157)
T d2f9zc1 133 EYNIETGKLLVRKV 146 (157)
T ss_dssp EEETTTTEEEEECC
T ss_pred EEECCCCEEEEEEC
Confidence 68888998864443
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