Citrus Sinensis ID: 024178

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
Protein Sequence
MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWLF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccHHHHHHHHHHHHcccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHEEHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHEEEEEcccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcc
Coil and Loop (DISEMBL)
mysnmgtqpgpgmprpaadaqpnpfgnafygagsglirgglgaygekilgssSEYVQSnisryfsdpqyyfQVNDQYVRNKLKVVlfpflhrghwtritepvggrlsykppiydinapdlyipfMAFGTYVVLAGFtlglqgkftpeALNWLFIKGLFGWFMQFMLLKVTLLslgsgeaplLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLflwlgnitvnwlf
Flexible Loop (DISEMBL)
MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPflhrghwtritepvggrlsYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWLF
Low Complexity Region (SEG)
MYSNMGTQPGPGMPRPAADAQPNPFGNAFygagsglirgglgaygEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWLF
Disordered region (IsUnstruct)
************************FGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWL*
Disordered Region (DISOPRED)
*******************************************************V*SNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGH*****************IYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMK*****************LLIFIAFAQLPLFLWLGNITVNWLF
Disordered Region (DISEMBL)
****************AADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWLF
Disordered Region (DISPRO)
************************FGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWLF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLFLWLGNITVNWLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	271	2.2.26 [Sep-21-2011]
Q5U3G6	304	Protein YIF1B OS=Danio re	yes	no	0.752	0.671	0.338	2e-26
Q4FZQ0	300	Protein YIF1B-B OS=Xenopu	N/A	no	0.756	0.683	0.323	4e-26
Q6GN58	300	Protein YIF1B-A OS=Xenopu	N/A	no	0.756	0.683	0.323	4e-26
Q5BJH7	314	Protein YIF1B OS=Homo sap	yes	no	0.874	0.754	0.323	4e-26
Q9CX30	311	Protein YIF1B OS=Mus musc	yes	no	0.756	0.659	0.326	8e-26
Q6P301	300	Protein YIF1B OS=Xenopus	yes	no	0.756	0.683	0.319	1e-24
P87148	293	Protein transport protein	yes	no	0.797	0.737	0.313	2e-24
Q3T196	293	Protein YIF1A OS=Bos taur	no	no	0.782	0.723	0.321	2e-22
Q91XB7	293	Protein YIF1A OS=Mus musc	no	no	0.671	0.621	0.345	1e-21
Q6PC24	307	Protein YIF1A OS=Danio re	no	no	0.771	0.680	0.315	3e-21

>sp|Q5U3G6|YIF1B_DANRE Protein YIF1B OS=Danio rerio GN=yif1b PE=2 SV=2

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 132/242 (54%), Gaps = 38/242 (15%)

Query: 43  AYGEKILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWT---R 97
           AYG  +     E +  N+ R+   S  +YYF V+  YV  KL +++FP++H  +W    +
Sbjct: 73  AYGSSLASHGKEMMDKNLDRFIPISKLKYYFAVDTVYVGKKLGLLVFPYMH-DNWEVNYQ 131

Query: 98  ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE--------AL 149
              PV        P +DINAPDLYIP M F TYV++AG  LG Q +F+PE        AL
Sbjct: 132 QDTPVA-------PRFDINAPDLYIPVMGFITYVLVAGLALGTQNRFSPEILGIQASSAL 184

Query: 150 NWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYS- 208
            WL I+ L       +LL + L+++ + +   +D+VA++GY + G+ + V+  ++F  + 
Sbjct: 185 VWLIIEVL------AVLLSLYLVTVNT-DLTTIDLVAFSGYKYVGMIVGVVAGLLFGRTG 237

Query: 209 YYFLILWMCMCMGVFLVKTMKRVLFAE-------MRTHDSSRHHYLLIFIAFAQLPLFL- 260
           YY  +LW C  + VF ++T++  + +E       +R   +    YL + IA AQ P+F+ 
Sbjct: 238 YYLALLWFCASIFVFTIRTLRLKILSEAAAEGRLVRGTKNQLRMYLTMAIAAAQ-PVFMY 296

Query: 261 WL 262
           WL
Sbjct: 297 WL 298

Danio rerio (taxid: 7955)

>sp|Q4FZQ0|YF1BB_XENLA Protein YIF1B-B OS=Xenopus laevis GN=yif1b-b PE=2 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 36/241 (14%)

Query: 43  AYGEKILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R  +
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE--------ALN 150
             PV        P +DINAPDLYIP MAF TY+++AG  LG Q +F+PE        AL 
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSRFSPEILGMQASSALA 181

Query: 151 WLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYS-Y 209
           WL ++ L       +LL + L+++ + +   +D+VA++GY + G+   V+  ++F  + Y
Sbjct: 182 WLIVEVL------AILLSLYLVTVNT-DLTTVDLVAFSGYKYVGMISGVIAGLLFGNTGY 234

Query: 210 YFLILWMCMCMGVFLVKTMKRVLFAE-------MRTHDSSRHHYLLIFIAFAQLPLFL-W 261
           Y ++ W C+ +  F+++T++  + +E       +R   +    YL + IA  Q P+F+ W
Sbjct: 235 YVVLAWCCISIVFFMIRTLRLKILSEAAAEGVLVRGARNQLRMYLTMAIAAVQ-PIFMYW 293

Query: 262 L 262
           L
Sbjct: 294 L 294

Xenopus laevis (taxid: 8355)

>sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A OS=Xenopus laevis GN=yif1b-a PE=2 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 36/241 (14%)

Query: 43  AYGEKILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R  +
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE--------ALN 150
             PV        P +DINAPDLYIP MAF TY+++AG  LG Q +F+PE        AL 
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFVTYILVAGLALGTQSRFSPEILGMQASSALA 181

Query: 151 WLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYS-Y 209
           WL ++ L       +LL + L+++ + +   +D+VA+ GY + G+   V+  ++F  + Y
Sbjct: 182 WLIVEVL------AILLSLYLVTVNT-DLTTVDLVAFTGYKYVGMISGVISGLLFGKTGY 234

Query: 210 YFLILWMCMCMGVFLVKTMKRVLFAE-------MRTHDSSRHHYLLIFIAFAQLPLFL-W 261
           Y ++ W C+ +  F+++T++  + +E       +R   +    YL + IA  Q P+F+ W
Sbjct: 235 YIVLAWCCISIVFFMIRTLRLKILSEAAAEGVLVRGARNQLRMYLTMAIAAVQ-PIFMYW 293

Query: 262 L 262
           L
Sbjct: 294 L 294

Xenopus laevis (taxid: 8355)

>sp|Q5BJH7|YIF1B_HUMAN Protein YIF1B OS=Homo sapiens GN=YIF1B PE=1 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 41/278 (14%)

Query: 6   GTQPGPG-MPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYF 64
           G Q  PG +  PAA   P P         S +      AYG  +     E V  NI R+ 
Sbjct: 51  GAQRAPGGLSYPAA--SPTPHAAFLADPVSNMAM----AYGSSLAAQGKELVDKNIDRFI 104

Query: 65  --SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDL 120
             +  +YYF V+  YV  KL ++ FP+LH+    +  +  PV        P +D+NAPDL
Sbjct: 105 PITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVA-------PRFDVNAPDL 157

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPE--------ALNWLFIKGLFGWFMQFMLLKVTLL 172
           YIP MAF TYV++AG  LG Q +F+P+        AL WL ++ L       +LL + L+
Sbjct: 158 YIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVL------AILLSLYLV 211

Query: 173 SLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLIL-WMCMCMGVFLVKTMKRV 231
           ++ + +   +D+VA+ GY + G+   VL  ++F    Y+L+L W C+ + VF+++T++  
Sbjct: 212 TVNT-DLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLK 270

Query: 232 LFAE-------MRTHDSSRHHYLLIFIAFAQLPLFLWL 262
           + A+       +R   +    YL + +A AQ  L  WL
Sbjct: 271 ILADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWL 308

Homo sapiens (taxid: 9606)

>sp|Q9CX30|YIF1B_MOUSE Protein YIF1B OS=Mus musculus GN=Yif1b PE=2 SV=2

 Score =  117 bits (293), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 128/239 (53%), Gaps = 34/239 (14%)

Query: 44  YGEKILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE- 100
           YG  +     E V  NI R+   S  +YYF V+  YV  KL +++FP+LH+    +  + 
Sbjct: 81  YGSSLAAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQD 140

Query: 101 -PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE--------ALNW 151
            PV        P +DINAPDLYIP MAF TY+++AG  LG Q +F+P+        AL W
Sbjct: 141 TPVA-------PRFDINAPDLYIPAMAFITYILVAGLALGTQDRFSPDLLGLQASSALAW 193

Query: 152 LFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVF-SYSYY 210
           L ++      +  +LL + L+++ + +   +D+VA+ GY + G+   VL  ++F    YY
Sbjct: 194 LTLE------VVAILLSLYLVTVNT-DLTTIDLVAFLGYKYVGMIGGVLTGLLFGKIGYY 246

Query: 211 FLILWMCMCMGVFLVKTMKRVLFAE-------MRTHDSSRHHYLLIFIAFAQLPLFLWL 262
            ++ W C+ + VF+++T++  + A+       +R   +    YL + +A AQ  L  WL
Sbjct: 247 LVLAWCCVSIFVFMIRTLRLKILAQAAAEGVPVRGARNQLRMYLTMAVAAAQPVLMYWL 305

Mus musculus (taxid: 10090)

>sp|Q6P301|YIF1B_XENTR Protein YIF1B OS=Xenopus tropicalis GN=yif1b PE=2 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 131/241 (54%), Gaps = 36/241 (14%)

Query: 43  AYGEKILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R  +
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE--------ALN 150
             PV  R       +DINAPDLYIP MAF TY+++AG  LG Q +F+PE        AL 
Sbjct: 129 DTPVAPR-------FDINAPDLYIPVMAFITYILVAGLALGTQSRFSPEILGMQASSALA 181

Query: 151 WLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYY 210
           WL ++ L       +LL + L+++ + +   +D+VA++GY + G+   V+  ++F  + Y
Sbjct: 182 WLIVEVL------AILLSLYLVTVNT-DLTTVDLVAFSGYKYVGMISGVISGLLFGKTGY 234

Query: 211 FLIL-WMCMCMGVFLVKTMKRVLFAE-------MRTHDSSRHHYLLIFIAFAQLPLFL-W 261
           +++L W  + +  F+++T++  + +E       +R   +    YL + IA  Q P+F+ W
Sbjct: 235 YVVLSWCGISVVFFMIRTLRLKILSEAAAEGVLVRGARNQLRMYLTMAIAAVQ-PIFMYW 293

Query: 262 L 262
           L
Sbjct: 294 L 294

Xenopus tropicalis (taxid: 8364)

>sp|P87148|YIF1_SCHPO Protein transport protein yif1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hrf1 PE=3 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 123/233 (52%), Gaps = 17/233 (7%)

Query: 45  GEKILGSSSEYVQSNISRYFSDPQ--YYFQVNDQYVRNKLKVVLFPFLHRGHWTRI---T 99
           G+  + +  EYV+ N  ++ S  +  +YF V + YV  KL +++FP+  R  W R    +
Sbjct: 61  GKNAVNAGQEYVEQNFGKWLSTTRLHHYFTVTNSYVVAKLLLIIFPWRRRS-WARKLRRS 119

Query: 100 EPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFG 159
           E  G    Y PP  D+N+PD+YIP MAF T+++L     GLQ  F PE       K    
Sbjct: 120 EINGSAEGYCPPAEDLNSPDMYIPLMAFTTHILLLCALAGLQDDFQPELFGLRASKACAV 179

Query: 160 WFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAVLGRIV-FSYSYYFLILWMC 217
             ++F+  ++    L  S ++ +LD++A++GY F GL L  L ++    +   F+ L+M 
Sbjct: 180 VLVEFLATRLGCYLLNISSQSQVLDLLAFSGYKFVGLILTSLSKLFEMPWVTRFVFLYMY 239

Query: 218 MCMGVFLVKTMKRVLFAE--------MRTHDSSRHHYLLIFIAFAQLPLFLWL 262
           +    FL++++K  +  E        + +H  SR  Y L FIA +Q+ LF+++
Sbjct: 240 LATAFFLLRSLKYAVLPESTMAINATITSHQRSRRIYFLFFIAASQI-LFMYV 291

Required for fusion of ER-derived vesicles with the Golgi during ER-to-Golgi protein transport. May be involved in proper membrane localization of Rab GTPases.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q3T196|YIF1A_BOVIN Protein YIF1A OS=Bos taurus GN=YIF1A PE=2 SV=1

 Score =  106 bits (265), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 15/227 (6%)

Query: 7   TQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFS- 65
           +QPG G P P AD       N  +  G  +    + AYG  I     + +   + R+ S 
Sbjct: 35  SQPG-GYPAPGADVA----FNVNHLLGDPMANMAM-AYGSSIASHGKDMMNKELHRFVSV 88

Query: 66  -DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPF 124
              +Y+F V+  YV  KL +++FP+ H+    + +  V       PP  D+NAPDLYIP 
Sbjct: 89  NKLKYFFAVDTAYVAKKLGLLVFPYTHQNWEVQYSRDVP-----LPPRQDLNAPDLYIPT 143

Query: 125 MAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTL-LSLGSGEAPLLD 183
           MAF TYV+LAG  LG+Q +F+PE L       L    M+ + L + + L+    +     
Sbjct: 144 MAFITYVLLAGMALGIQKRFSPEVLGLCASTALVWVVMEVLALLLGIYLATVRSDLSTFH 203

Query: 184 VVAYAGYTFTGLCLAVLGRIVF-SYSYYFLILWMCMCMGVFLVKTMK 229
           ++AY+GY + G+ L+VL  ++F S  YY  + W    +  F+V++++
Sbjct: 204 LLAYSGYKYVGMILSVLTGLLFGSDGYYVALAWTSSALMYFIVRSLR 250

Possible role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q91XB7|YIF1A_MOUSE Protein YIF1A OS=Mus musculus GN=Yif1a PE=2 SV=1

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 9/191 (4%)

Query: 43  AYGEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE 100
           AYG  I     + V   + R+ S    +Y+F V+  YV  KL +++FP+ H+    + + 
Sbjct: 65  AYGTSIASQGKDIVHKELHRFVSVNKLKYFFAVDTAYVAKKLGLLVFPYTHQNWKMQYSH 124

Query: 101 PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGW 160
            V       PP  D+NAPDLYIP MAF TYV+LAG  LG+Q +F+PE L       L   
Sbjct: 125 DVP-----LPPRKDLNAPDLYIPTMAFITYVLLAGMALGIQQRFSPEVLGLCASTALVWV 179

Query: 161 FMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAVLGRIVF-SYSYYFLILWMCM 218
           FM+ + L + L       E     ++AY+GY + G+ L+VL  ++F S  YY  + W   
Sbjct: 180 FMEVLALLLGLYLATVRSELSTFHLLAYSGYKYVGMILSVLTGLLFGSDGYYVALAWTSS 239

Query: 219 CMGVFLVKTMK 229
            +  F+V++++
Sbjct: 240 ALMYFIVRSLR 250

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q6PC24|YIF1A_DANRE Protein YIF1A OS=Danio rerio GN=yif1a PE=2 SV=1

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 35/244 (14%)

Query: 4   NMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRY 63
           NM   P  G      +   +P  NA    GS L   G             + V   I+R+
Sbjct: 48  NMAEMPAGGQEPGVGNIFADPMANAAMMYGSTLANQG------------KDIVNKEINRF 95

Query: 64  FS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLY 121
            S    +Y+F V+ +YV  KL +++FP+ H+    R       R +   P +D+NAPDLY
Sbjct: 96  MSVNKLKYFFAVDTKYVMKKLLLLMFPYTHQDWEVRY-----HRDTPLTPRHDVNAPDLY 150

Query: 122 IPFMAFGTYVVLAGFTLGLQGKFTPE--------ALNWLFIKGLFGWFMQFMLLKVTLLS 173
           IP MAF TY++LAG  LG+Q +F+PE        AL W+ I+ L      ++L   T LS
Sbjct: 151 IPTMAFITYILLAGMALGIQKRFSPEVLGLCASTALVWMIIEVLVMLLSLYLLTVHTDLS 210

Query: 174 LGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVF-SYSYYFLILWMCMCMGVFLVKTMKRVL 232
                    D+VAY+GY + G+ L V   ++F S  YY  + W    +  F+V+++K  +
Sbjct: 211 -------TFDLVAYSGYKYVGMILTVFCGLLFGSDGYYVALAWSSCALMFFIVRSLKMKI 263

Query: 233 FAEM 236
            + +
Sbjct: 264 LSSI 267

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
255587105	269	Protein YIF1A, putative [Ricinus communi	0.992	1.0	0.863	1e-136
449468758	269	PREDICTED: protein YIF1B-A-like [Cucumis	0.929	0.936	0.884	1e-130
30695009	269	YIF1 integral membrane domain-containing	0.992	1.0	0.826	1e-129
110743793	269	hypothetical protein [Arabidopsis thalia	0.992	1.0	0.822	1e-128
388501636	269	unknown [Lotus japonicus]	0.992	1.0	0.826	1e-128
356526597	273	PREDICTED: protein YIF1B-like [Glycine m	0.996	0.989	0.823	1e-128
356568875	273	PREDICTED: protein YIF1B-like [Glycine m	0.996	0.989	0.823	1e-128
363807996	269	uncharacterized protein LOC100799056 [Gl	0.992	1.0	0.819	1e-127
224095666	269	predicted protein [Populus trichocarpa]	0.985	0.992	0.817	1e-127
297817248	265	hypothetical protein ARALYDRAFT_349013 [	0.970	0.992	0.828	1e-126

>gi|255587105|ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] gi|223525796|gb|EEF28242.1| Protein YIF1A, putative [Ricinus communis]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/271 (86%), Positives = 253/271 (93%), Gaps = 2/271 (0%)

Query: 1   MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 60
           MY+N+GTQPG  +PRP  + QPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI
Sbjct: 1   MYNNVGTQPG--VPRPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 58

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL
Sbjct: 59  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 118

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
           YIPFMAFGTY+VLAG +LGL GKF+PE LNWLF+KGL GWFMQ  LLKVTLLSLGSGEAP
Sbjct: 119 YIPFMAFGTYIVLAGLSLGLNGKFSPENLNWLFVKGLLGWFMQVALLKVTLLSLGSGEAP 178

Query: 181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
           LLD+VAYAGYTFTG+C+AVLGRI  +YSYYFL+ W C+CMG+FLVKTMKRVLFAE+RT+D
Sbjct: 179 LLDIVAYAGYTFTGMCIAVLGRIFINYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRTYD 238

Query: 241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWLF 271
           SSRHHYLL+FIA AQ PLF WLGNIT+NWLF
Sbjct: 239 SSRHHYLLLFIALAQFPLFTWLGNITINWLF 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468758|ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus] gi|449502274|ref|XP_004161595.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus]

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/252 (88%), Positives = 238/252 (94%)

Query: 19  DAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYV 78
            +QPNPFGNAFYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISRYFSDPQYYFQVNDQYV
Sbjct: 17  SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISRYFSDPQYYFQVNDQYV 76

Query: 79  RNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTL 138
           RNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGF+L
Sbjct: 77  RNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSL 136

Query: 139 GLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLA 198
           GLQGKFTPEAL+WLFIKGL GWFMQ MLLKVTLLSLGSGEAPLLD+VAYAGY FTGLCLA
Sbjct: 137 GLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLA 196

Query: 199 VLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPL 258
            +GRI   YSYYFL+ WM +CMG+FLVKTMKRVLFAE+RT+DSSRHHYLL+FIA AQ PL
Sbjct: 197 AIGRISLKYSYYFLMPWMALCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPL 256

Query: 259 FLWLGNITVNWL 270
           F WLGN++VNWL
Sbjct: 257 FTWLGNVSVNWL 268

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30695009|ref|NP_191509.2| YIF1 integral membrane domain-containing protein [Arabidopsis thaliana] gi|332646412|gb|AEE79933.1| YIF1 integral membrane domain-containing protein [Arabidopsis thaliana] gi|385137882|gb|AFI41202.1| HRF1 protein, partial [Arabidopsis thaliana]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/271 (82%), Positives = 244/271 (90%), Gaps = 2/271 (0%)

Query: 1   MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 60
           MY+NMG  P PGM  P A+ QP+PFGN F G GSGLIR GLGAYGEKI GSSSEYVQSNI
Sbjct: 1   MYNNMG--PRPGMAMPQANPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNI 58

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVNDQYVRNKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDL
Sbjct: 59  SRYFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDL 118

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
           YIP MAFGTYVVLAG +LGL GKFTPEALNWLF+KG+ GWF+Q MLLK+TLLSLGSGEAP
Sbjct: 119 YIPLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAP 178

Query: 181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
           LLD+VAYAGYTFTGLCLAVLG+I++ YSYY LI W C+C GVFLVKTMKRVLFAE R++D
Sbjct: 179 LLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAESRSYD 238

Query: 241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWLF 271
           SSRHHYLLIF+A AQ PL +WLGNI+VNWLF
Sbjct: 239 SSRHHYLLIFVALAQFPLLIWLGNISVNWLF 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110743793|dbj|BAE99732.1| hypothetical protein [Arabidopsis thaliana]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/271 (82%), Positives = 243/271 (89%), Gaps = 2/271 (0%)

Query: 1   MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 60
           MY+NMG  P PGM  P A+ QP+PFGN F G GSGLIR GLGAYGEKI GSSSEYVQSNI
Sbjct: 1   MYNNMG--PRPGMAMPQANPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNI 58

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVNDQYVRNKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDL
Sbjct: 59  SRYFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDL 118

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
           YIP MAFGTYVVLAG +LGL GKFTPEALNWLF+KG+ GWF+Q MLLK+TLLSLGSGEAP
Sbjct: 119 YIPLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAP 178

Query: 181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
           LLD+VAYAGYTFTGLCLAVLG+I++ YSYY LI W C+C GVFLVK MKRVLFAE R++D
Sbjct: 179 LLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKAMKRVLFAESRSYD 238

Query: 241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWLF 271
           SSRHHYLLIF+A AQ PL +WLGNI+VNWLF
Sbjct: 239 SSRHHYLLIFVALAQFPLLIWLGNISVNWLF 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501636|gb|AFK38884.1| unknown [Lotus japonicus]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/271 (82%), Positives = 244/271 (90%), Gaps = 2/271 (0%)

Query: 1   MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 60
           MY+N+G+QPG  +P+P   +Q NPFGNAF  AGSGLIRGGLGAYG KILGSSSEYVQSNI
Sbjct: 1   MYNNVGSQPG--VPQPPTSSQANPFGNAFQVAGSGLIRGGLGAYGGKILGSSSEYVQSNI 58

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVND YV+NKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL
Sbjct: 59  SRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 118

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
           YIP MAFGTYVVLAG +LGL GKF+PEALN LFIKGL GWFMQ  LLK+TLLSLGSGEAP
Sbjct: 119 YIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGEAP 178

Query: 181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
           LLD++AYAGYTFTG+CLAVLGRI+  YSYYFL+ W C+CM VFLVKTMKRVLFAE+RT+D
Sbjct: 179 LLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRTYD 238

Query: 241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWLF 271
           SS+HHYLL+FIA  Q PLF WLGNITVNWL 
Sbjct: 239 SSKHHYLLLFIALVQFPLFTWLGNITVNWLL 269

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526597|ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/272 (82%), Positives = 245/272 (90%), Gaps = 2/272 (0%)

Query: 1   MYSNMGTQPG--PGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQS 58
           MY+N+G  PG     P+P   +QPN FGNAF  +GSGLIRGGLGAYGEKILGSSSEYVQS
Sbjct: 1   MYTNIGMPPGVPQHHPQPPMSSQPNLFGNAFNSSGSGLIRGGLGAYGEKILGSSSEYVQS 60

Query: 59  NISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 118
           NISRYFSDPQYYFQVND YV+NKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 119 DLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGE 178
           DLYIP MAFGTYVVLAG +LGL+GKF+PEALNWLFIKGL GWFMQ  LLKVTLLSLGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGLVGWFMQTALLKVTLLSLGSGE 180

Query: 179 APLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRT 238
           APLLD++AYAGYTF GLCLAV GRI++SYSYYFL+LW C+CM V+LVKTMKRVLFAE+R+
Sbjct: 181 APLLDIIAYAGYTFPGLCLAVSGRIIWSYSYYFLMLWTCLCMAVYLVKTMKRVLFAEVRS 240

Query: 239 HDSSRHHYLLIFIAFAQLPLFLWLGNITVNWL 270
           +DSS+HHYLL+ IA AQ PLF WLGNITVNWL
Sbjct: 241 YDSSKHHYLLLLIALAQFPLFTWLGNITVNWL 272

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568875|ref|XP_003552633.1| PREDICTED: protein YIF1B-like [Glycine max]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/272 (82%), Positives = 244/272 (89%), Gaps = 2/272 (0%)

Query: 1   MYSNMGTQPG--PGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQS 58
           MY+N+G  PG     P+P   +QPN FGNAF  AGSGLIRGGLGAYGEKILGSSSEYVQS
Sbjct: 1   MYTNIGMPPGVPQHHPQPPTSSQPNLFGNAFNSAGSGLIRGGLGAYGEKILGSSSEYVQS 60

Query: 59  NISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 118
           NISRYFSDPQYYFQVND YV+NKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 119 DLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGE 178
           DLYIP MAFGTYVVLAG +LGL+G F+PEALNWLFIKGL GWFMQ  LLKVTLLSLGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGMFSPEALNWLFIKGLVGWFMQTALLKVTLLSLGSGE 180

Query: 179 APLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRT 238
           APLLD++A AGYTF GLCLAV GR+++SYSYYFL+LW C+CM VFLVKTMKRVLFAE+R+
Sbjct: 181 APLLDIIANAGYTFAGLCLAVCGRMIWSYSYYFLMLWTCICMAVFLVKTMKRVLFAEVRS 240

Query: 239 HDSSRHHYLLIFIAFAQLPLFLWLGNITVNWL 270
           +DSS+HHYLL+FIA AQ PLF WLGNITVNWL
Sbjct: 241 YDSSKHHYLLLFIALAQFPLFTWLGNITVNWL 272

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807996|ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycine max] gi|255641178|gb|ACU20866.1| unknown [Glycine max]

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/271 (81%), Positives = 242/271 (89%), Gaps = 2/271 (0%)

Query: 1   MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 60
           MYSN+G+QPG  + +P     PNPFG+AF  AGSGLIRGGLGAYG KILGSSSEYVQSNI
Sbjct: 1   MYSNVGSQPG--VQQPQTSLPPNPFGSAFNVAGSGLIRGGLGAYGGKILGSSSEYVQSNI 58

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVNDQYV+NKLKVVL PFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL
Sbjct: 59  SRYFSDPQYYFQVNDQYVKNKLKVVLLPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 118

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
           YIP MAFGTYV+LAG +LGL GKF+PEALN LFIKGL GWFMQ  L KVTLLSLGSGEAP
Sbjct: 119 YIPLMAFGTYVILAGLSLGLHGKFSPEALNLLFIKGLLGWFMQAALPKVTLLSLGSGEAP 178

Query: 181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
           LLD++AYAGYTFTG+CLAVLGRI+  YSYYFL+ W C+CMGVFLVKTMKRVLFAE+R++D
Sbjct: 179 LLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYD 238

Query: 241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWLF 271
           SSRHHYLL+FIA  Q PLF WLGNIT+NWL 
Sbjct: 239 SSRHHYLLLFIALVQFPLFTWLGNITINWLL 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095666|ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|222853332|gb|EEE90879.1| predicted protein [Populus trichocarpa]

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/269 (81%), Positives = 241/269 (89%), Gaps = 2/269 (0%)

Query: 1   MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNI 60
           MY+N+G QPG  +PRP  + QP PFGNAFYGAGSGLI+GGLGAYGEKILGSSSEYVQSNI
Sbjct: 1   MYNNVGPQPG--VPRPPTNPQPTPFGNAFYGAGSGLIKGGLGAYGEKILGSSSEYVQSNI 58

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL
Sbjct: 59  SRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 118

Query: 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
           YIPFMAFGTYVVLAG +LGL GKF+PEALNWLF+KGL GWFMQ  LLK+ LLSLGSGEAP
Sbjct: 119 YIPFMAFGTYVVLAGLSLGLNGKFSPEALNWLFVKGLLGWFMQVALLKIILLSLGSGEAP 178

Query: 181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
           LLD+VAYAGYTFTG+C AVLG+I+  YSYY L+   C+CMG+FLVKTMKRVLFAE+R+ D
Sbjct: 179 LLDMVAYAGYTFTGICFAVLGKILPGYSYYILMPCTCLCMGIFLVKTMKRVLFAEVRSVD 238

Query: 241 SSRHHYLLIFIAFAQLPLFLWLGNITVNW 269
           SSRHHYLL+ I   Q PLF WLGN++VNW
Sbjct: 239 SSRHHYLLLLIGLVQFPLFAWLGNVSVNW 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817248|ref|XP_002876507.1| hypothetical protein ARALYDRAFT_349013 [Arabidopsis lyrata subsp. lyrata] gi|297322345|gb|EFH52766.1| hypothetical protein ARALYDRAFT_349013 [Arabidopsis lyrata subsp. lyrata]

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/263 (82%), Positives = 237/263 (90%)

Query: 9   PGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQ 68
           P PGMP P  + QP+PFGN F G GSGLIR GLGAYGEKI GSSSEYVQSNISRYFSDPQ
Sbjct: 3   PQPGMPMPQVNPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNISRYFSDPQ 62

Query: 69  YYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFG 128
           YYFQVNDQYVRNKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDLYIP MAFG
Sbjct: 63  YYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYIPLMAFG 122

Query: 129 TYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYA 188
           TYVVLAG +LGL GKFTPEALNWLF+KG+ GWF+Q MLLK+TLLSLGSGEAPLLD+VAYA
Sbjct: 123 TYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAPLLDIVAYA 182

Query: 189 GYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLL 248
           GYTFTGLCLAVLG+I++ YSYY LI W C+C GVFLVKTMKRVLFAE R++ SSRHHYLL
Sbjct: 183 GYTFTGLCLAVLGKIIWGYSYYVLIPWTCICTGVFLVKTMKRVLFAESRSYVSSRHHYLL 242

Query: 249 IFIAFAQLPLFLWLGNITVNWLF 271
           IF+A AQ PL +WLGNI+VNWLF
Sbjct: 243 IFVALAQFPLLIWLGNISVNWLF 265

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
TAIR|locus:2097583	269	AT3G59500 [Arabidopsis thalian	0.992	1.0	0.778	1.6e-116
TAIR|locus:2015716	269	AT1G30890 "AT1G30890" [Arabido	0.988	0.996	0.755	1.2e-113
UNIPROTKB|Q5BJH7	314	YIF1B "Protein YIF1B" [Homo sa	0.892	0.770	0.315	7.3e-27
MGI|MGI:1924504	311	Yif1b "Yip1 interacting factor	0.885	0.771	0.307	1.5e-26
ZFIN|ZDB-GENE-041114-16	304	yif1b "Yip1 interacting factor	0.745	0.664	0.328	3.2e-26
POMBASE|SPBC25H2.06c	293	hrf1 "COPII-coated vesicle com	0.782	0.723	0.314	2.2e-25
CGD|CAL0004032	300	orf19.6642 [Candida albicans (	0.675	0.61	0.292	1.2e-24
UNIPROTKB|Q59PS2	300	YIF1 "Putative uncharacterized	0.675	0.61	0.292	1.2e-24
ZFIN|ZDB-GENE-030131-6922	307	yif1a "Yip1 interacting factor	0.870	0.768	0.311	2.6e-24
UNIPROTKB|G4NJF3	322	MGG_12628 "Hrf1 domain-contain	0.848	0.714	0.313	3.3e-24

TAIR|locus:2097583 AT3G59500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
 Identities = 211/271 (77%), Positives = 231/271 (85%)

Query:     1 MYSNMGTQPGPGMPRPAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNI 60
             MY+NMG  P PGM  P A+ QP+PFGN F                EKI GSSSEYVQSNI
Sbjct:     1 MYNNMG--PRPGMAMPQANPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNI 58

Query:    61 SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
             SRYFSDPQYYFQVNDQYVRNKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDL
Sbjct:    59 SRYFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDL 118

Query:   121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
             YIP MAFGTYVVLAG +LGL GKFTPEALNWLF+KG+ GWF+Q MLLK+TLLSLGSGEAP
Sbjct:   119 YIPLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAP 178

Query:   181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
             LLD+VAYAGYTFTGLCLAVLG+I++ YSYY LI W C+C GVFLVKTMKRVLFAE R++D
Sbjct:   179 LLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAESRSYD 238

Query:   241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWLF 271
             SSRHHYLLIF+A AQ PL +WLGNI+VNWLF
Sbjct:   239 SSRHHYLLIFVALAQFPLLIWLGNISVNWLF 269

GO:0005739 "mitochondrion" evidence=ISM

GO:0016021 "integral to membrane" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2015716 AT1G30890 "AT1G30890" [Arabidopsis thaliana (taxid:3702)]

 Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 204/270 (75%), Positives = 227/270 (84%)

Query:     1 MYSNMGTQPGPGMPRPAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNI 60
             MY+NMG  P PGMPRP  + +P PFGN F                E+ILGSSSEYVQSNI
Sbjct:     1 MYNNMG--PQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNI 58

Query:    61 SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120
             SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDL
Sbjct:    59 SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDL 118

Query:   121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLGSGEAP 180
             YIPFMAFGTYVVLAG +LGL GKFTPEALNWLF+KGL GWF+Q MLLKVTLLSLGSGEAP
Sbjct:   119 YIPFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGEAP 178

Query:   181 LLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTHD 240
             LLD+VAY GY F GLCLA   +I++ YSYY L+ W C+C G+FLVKTMKRVLFAE+R++D
Sbjct:   179 LLDIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRSYD 238

Query:   241 SSRHHYLLIFIAFAQLPLFLWLGNITVNWL 270
             SS+HHYLL+F+A  Q PL +WLGNI+VNWL
Sbjct:   239 SSKHHYLLLFLALVQFPLLIWLGNISVNWL 268

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=ISS

GO:0016192 "vesicle-mediated transport" evidence=RCA

UNIPROTKB|Q5BJH7 YIF1B "Protein YIF1B" [Homo sapiens (taxid:9606)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 86/273 (31%), Positives = 135/273 (49%)

Query:     6 GTQPGPG-MPRPAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNISRYF 64
             G Q  PG +  PAA   P P   AF                  +     E V  NI R+ 
Sbjct:    51 GAQRAPGGLSYPAAS--PTPHA-AFLADPVSNMAMAYGSS---LAAQGKELVDKNIDRFI 104

Query:    65 --SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDL 120
               +  +YYF V+  YV  KL ++ FP+LH+    +  +  PV        P +D+NAPDL
Sbjct:   105 PITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVA-------PRFDVNAPDL 157

Query:   121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWF---MQFMLLKVTLLSLGSG 177
             YIP MAF TYV++AG  LG Q +F+P+ L  L       W    +  +LL + L+++ + 
Sbjct:   158 YIPAMAFITYVLVAGLALGTQDRFSPDLLG-LQASSALAWLTLEVLAILLSLYLVTVNT- 215

Query:   178 EAPLLDVVAYAGYTFTGLCLAVLGRIVFSYSYYFLIL-WMCMCMGVFLVKTMKRVLFAEM 236
             +   +D+VA+ GY + G+   VL  ++F    Y+L+L W C+ + VF+++T++  + A+ 
Sbjct:   216 DLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMIRTLRLKILADA 275

Query:   237 RTHD----SSRHH---YLLIFIAFAQLPLFLWL 262
                      +R+    YL + +A AQ  L  WL
Sbjct:   276 AAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWL 308

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1924504 Yif1b "Yip1 interacting factor homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 83/270 (30%), Positives = 133/270 (49%)

Query:    14 PRPAADAQPNPFGNAFXXXXXXXXXXXX-XXXXEKILGSS-----SEYVQSNISRYF--S 65
             P      QP+P G  +                   + GSS      E V  NI R+   S
Sbjct:    45 PSRGYGGQPSPGGLGYPPSSSDAAFLAAPMSNMAMVYGSSLAAQGKELVDKNIDRFIPVS 104

Query:    66 DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIP 123
               +YYF V+  YV  KL +++FP+LH+    +  +  PV        P +DINAPDLYIP
Sbjct:   105 KLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQDTPVA-------PRFDINAPDLYIP 157

Query:   124 FMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWF---MQFMLLKVTLLSLGSGEAP 180
              MAF TY+++AG  LG Q +F+P+ L  L       W    +  +LL + L+++ + +  
Sbjct:   158 AMAFITYILVAGLALGTQDRFSPDLLG-LQASSALAWLTLEVVAILLSLYLVTVNT-DLT 215

Query:   181 LLDVVAYAGYTFTGLCLAVLGRIVFS-YSYYFLILWMCMCMGVFLVKTMKRVLFAEMRTH 239
              +D+VA+ GY + G+   VL  ++F    YY ++ W C+ + VF+++T++  + A+    
Sbjct:   216 TIDLVAFLGYKYVGMIGGVLTGLLFGKIGYYLVLAWCCVSIFVFMIRTLRLKILAQAAAE 275

Query:   240 D----SSRHH---YLLIFIAFAQLPLFLWL 262
                   +R+    YL + +A AQ  L  WL
Sbjct:   276 GVPVRGARNQLRMYLTMAVAAAQPVLMYWL 305

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-041114-16 yif1b "Yip1 interacting factor homolog B (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 73/222 (32%), Positives = 125/222 (56%)

Query:    54 EYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP 111
             E +  N+ R+   S  +YYF V+  YV  KL +++FP++H  +W  +       ++   P
Sbjct:    84 EMMDKNLDRFIPISKLKYYFAVDTVYVGKKLGLLVFPYMH-DNW-EVNYQQDTPVA---P 138

Query:   112 IYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFM--LLKV 169
              +DINAPDLYIP M F TYV++AG  LG Q +F+PE L       L    ++ +  LL +
Sbjct:   139 RFDINAPDLYIPVMGFITYVLVAGLALGTQNRFSPEILGIQASSALVWLIIEVLAVLLSL 198

Query:   170 TLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVFSYS-YYFLILWMCMCMGVFLVKTM 228
              L+++ + +   +D+VA++GY + G+ + V+  ++F  + YY  +LW C  + VF ++T+
Sbjct:   199 YLVTVNT-DLTTIDLVAFSGYKYVGMIVGVVAGLLFGRTGYYLALLWFCASIFVFTIRTL 257

Query:   229 KRVLFAE-------MRTHDSSRHHYLLIFIAFAQLPLFL-WL 262
             +  + +E       +R   +    YL + IA AQ P+F+ WL
Sbjct:   258 RLKILSEAAAEGRLVRGTKNQLRMYLTMAIAAAQ-PVFMYWL 298

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

POMBASE|SPBC25H2.06c hrf1 "COPII-coated vesicle component Hrf1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 72/229 (31%), Positives = 121/229 (52%)

Query:    49 LGSSSEYVQSNISRYFSDPQ--YYFQVNDQYVRNKLKVVLFPFLHRGHWTRI---TEPVG 103
             + +  EYV+ N  ++ S  +  +YF V + YV  KL +++FP+  R  W R    +E  G
Sbjct:    65 VNAGQEYVEQNFGKWLSTTRLHHYFTVTNSYVVAKLLLIIFPWRRRS-WARKLRRSEING 123

Query:   104 GRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQ 163
                 Y PP  D+N+PD+YIP MAF T+++L     GLQ  F PE       K      ++
Sbjct:   124 SAEGYCPPAEDLNSPDMYIPLMAFTTHILLLCALAGLQDDFQPELFGLRASKACAVVLVE 183

Query:   164 FMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAVLGRIV-FSYSYYFLILWMCMCMG 221
             F+  ++    L  S ++ +LD++A++GY F GL L  L ++    +   F+ L+M +   
Sbjct:   184 FLATRLGCYLLNISSQSQVLDLLAFSGYKFVGLILTSLSKLFEMPWVTRFVFLYMYLATA 243

Query:   222 VFLVKTMKRVLFAE--------MRTHDSSRHHYLLIFIAFAQLPLFLWL 262
              FL++++K  +  E        + +H  SR  Y L FIA +Q+ LF+++
Sbjct:   244 FFLLRSLKYAVLPESTMAINATITSHQRSRRIYFLFFIAASQI-LFMYV 291

GO:0003674 "molecular_function" evidence=ND

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0006886 "intracellular protein transport" evidence=NAS

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO

GO:0006995 "cellular response to nitrogen starvation" evidence=IMP

GO:0030134 "ER to Golgi transport vesicle" evidence=ISO

GO:0030173 "integral to Golgi membrane" evidence=ISO

GO:0070317 "negative regulation of G0 to G1 transition" evidence=IMP

CGD|CAL0004032 orf19.6642 [Candida albicans (taxid:5476)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 55/188 (29%), Positives = 107/188 (56%)

Query:    52 SSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP 111
             S++Y+Q N      D +YYFQV++ YV  K+ ++L P+ H+  W R++    G   + PP
Sbjct:    77 SNQYLQENFGSLQGDIKYYFQVSNSYVFKKIILILMPYNHKD-WNRVSTKETGTNQFLPP 135

Query:   112 IYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTL 171
               DINAPDLY+P M+F TY++L     G+ G F P+   +L  + +    +  ++ K  L
Sbjct:   136 NLDINAPDLYLPLMSFVTYILLWAAFQGINGDFHPQLFGYLASQTIAFSVLDVVIFKTGL 195

Query:   172 LSLGSGEAPLLDVVAYAGYTFTGLC-LAVLGRIVFSYS---YYFLILWMCMCMGVFLVKT 227
               L   ++ + D+++++GY +  +  L +L  +V +Y    YY ++L +   + +FL+++
Sbjct:   196 YLLNCPQSKIYDIISFSGYKYVSIIVLLILKYLVGNYLGLFYYIVVLLLIANLSIFLMRS 255

Query:   228 MKRVLFAE 235
             ++ ++  +
Sbjct:   256 LRFLILPQ 263

GO:0003674 "molecular_function" evidence=ND

GO:0030134 "ER to Golgi transport vesicle" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0070317 "negative regulation of G0 to G1 transition" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

UNIPROTKB|Q59PS2 YIF1 "Putative uncharacterized protein YIF1" [Candida albicans SC5314 (taxid:237561)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 55/188 (29%), Positives = 107/188 (56%)

Query:    52 SSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP 111
             S++Y+Q N      D +YYFQV++ YV  K+ ++L P+ H+  W R++    G   + PP
Sbjct:    77 SNQYLQENFGSLQGDIKYYFQVSNSYVFKKIILILMPYNHKD-WNRVSTKETGTNQFLPP 135

Query:   112 IYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTL 171
               DINAPDLY+P M+F TY++L     G+ G F P+   +L  + +    +  ++ K  L
Sbjct:   136 NLDINAPDLYLPLMSFVTYILLWAAFQGINGDFHPQLFGYLASQTIAFSVLDVVIFKTGL 195

Query:   172 LSLGSGEAPLLDVVAYAGYTFTGLC-LAVLGRIVFSYS---YYFLILWMCMCMGVFLVKT 227
               L   ++ + D+++++GY +  +  L +L  +V +Y    YY ++L +   + +FL+++
Sbjct:   196 YLLNCPQSKIYDIISFSGYKYVSIIVLLILKYLVGNYLGLFYYIVVLLLIANLSIFLMRS 255

Query:   228 MKRVLFAE 235
             ++ ++  +
Sbjct:   256 LRFLILPQ 263

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-030131-6922 yif1a "Yip1 interacting factor homolog A (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 81/260 (31%), Positives = 130/260 (50%)

Query:    16 PAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNISRYFS--DPQYYFQV 73
             PA   +P   GN F                  +     + V   I+R+ S    +Y+F V
Sbjct:    53 PAGGQEPG-VGNIFADPMANAAMMYGST----LANQGKDIVNKEINRFMSVNKLKYFFAV 107

Query:    74 NDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVL 133
             + +YV  KL +++FP+ H+  W    E    R +   P +D+NAPDLYIP MAF TY++L
Sbjct:   108 DTKYVMKKLLLLMFPYTHQD-W----EVRYHRDTPLTPRHDVNAPDLYIPTMAFITYILL 162

Query:   134 AGFTLGLQGKFTPEALNWLFIKGLFGWFMQF--MLLKVTLLSLGSGEAPLLDVVAYAGYT 191
             AG  LG+Q +F+PE L       L    ++   MLL + LL++ + +    D+VAY+GY 
Sbjct:   163 AGMALGIQKRFSPEVLGLCASTALVWMIIEVLVMLLSLYLLTVHT-DLSTFDLVAYSGYK 221

Query:   192 FTGLCLAVLGRIVF-SYSYYFLILWMCMCMGVFLVKTMK-RVLFA----EMRTHDSSRHH 245
             + G+ L V   ++F S  YY  + W    +  F+V+++K ++L +     M    S++  
Sbjct:   222 YVGMILTVFCGLLFGSDGYYVALAWSSCALMFFIVRSLKMKILSSISADSMGAGASAKPR 281

Query:   246 Y-LLIFIAFAQLPLFL--WL 262
             + L I +A A    F+  WL
Sbjct:   282 FRLYITVASAAFQPFIIYWL 301

GO:0003674 "molecular_function" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|G4NJF3 MGG_12628 "Hrf1 domain-containing protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 79/252 (31%), Positives = 127/252 (50%)

Query:     6 GTQPGPGMPRPAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNISRYFS 65
             G  P P   +  A  Q N FG  +                        E +  NI+RY S
Sbjct:    45 GGSPYPQQQQGGAGPQ-NMFGQ-YGQFMNDPAAQVAAHFGSTAFRQGQEIIDQNINRYLS 102

Query:    66 DP--QYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPV---GGRLSYKPPIYDINAPDL 120
                 ++YF V + YV NK+ +VLFP+ H+  W+R  +P    GG+  Y PP  D+N+PD+
Sbjct:   103 VHLLKHYFNVTNSYVINKIYLVLFPWRHKP-WSR--KPAMGPGGQEGYLPPRDDVNSPDM 159

Query:   121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVT--LLSLGSGE 178
             YIP M+  TY++L+    GL+G+F PE L       L     + ++LK+   ++S+ S  
Sbjct:   160 YIPVMSLVTYILLSTAIAGLRGQFQPELLGNTAGTALIVVAAEIIILKLGCYIMSI-SNN 218

Query:   179 APLLDVVAYAGYTFTGLCLAVL-------GRIVFSYSYYFLILWMCMCMGVFLVKTMKRV 231
             + LLD+VAY+GY F G+ + V        G+    +S + + ++  +   +FL++++K V
Sbjct:   219 SQLLDLVAYSGYKFVGVIVTVAVAEVMNGGKGTGGWSGWSVFIYTFLANSLFLMRSLKYV 278

Query:   232 LFAEMRTHDSSR 243
             L  E    D+SR
Sbjct:   279 LLPE--NADNSR 288

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT3G59500	integral membrane HRF1 family protein; integral membrane HRF1 family protein; LOCATED IN- integral to membrane, endoplasmic reticulum; EXPRESSED IN- guard cell, callus; CONTAINS InterPro DOMAIN/s- Hrf1 (InterPro-IPR005578); BEST Arabidopsis thaliana protein match is- integral membrane HRF1 family protein (TAIR-AT1G30890.2); Has 337 Blast hits to 337 proteins in 127 species- Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 90; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source- NCBI BLink). (269 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT3G29270	ubiquitin-protein ligase; ubiquitin-protein ligase; FUNCTIONS IN- ubiquitin-protein ligase acti [...] (263 aa)				•	•				0.928
	BTI3	BTI3 (VIRB2-INTERACTING PROTEIN 3); VIRB2-INTERACTING PROTEIN 3 (BTI3); INVOLVED IN- biological [...] (257 aa)				•	•				0.927
	AT1G30890	integral membrane HRF1 family protein; integral membrane HRF1 family protein; FUNCTIONS IN- mol [...] (269 aa)						•		•	0.899
	AT3G11320	organic anion transmembrane transporter; organic anion transmembrane transporter; FUNCTIONS IN- [...] (308 aa)							•		0.879
	AT1G32090	early-responsive to dehydration protein-related / ERD protein-related; early-responsive to dehy [...] (806 aa)							•		0.871
	BTI2	BTI2 (VIRB2-INTERACTING PROTEIN 2); VIRB2-INTERACTING PROTEIN 2 (BTI2); INVOLVED IN- biological [...] (271 aa)					•				0.690
	UXS4	UXS4 (UDP-XYLOSE SYNTHASE 4); UDP-glucuronate decarboxylase/ catalytic; encodes a protein simil [...] (443 aa)							•		0.675
	XXT5	XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5); transferase/ transferase, transferring glycosyl groups [...] (457 aa)							•		0.534
	AT5G16890	exostosin family protein; exostosin family protein; FUNCTIONS IN- catalytic activity; INVOLVED [...] (511 aa)							•		0.508
	AT3G24040	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein; glycosyltrans [...] (417 aa)							•		0.508

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	271
pfam03878	240	pfam03878, YIF1, YIF1	4e-86
COG5197	284	COG5197, COG5197, Predicted membrane protein [Func	8e-35

>gnl|CDD|217776 pfam03878, YIF1, YIF1

 Score =  256 bits (656), Expect = 4e-86
 Identities = 98/233 (42%), Positives = 134/233 (57%), Gaps = 17/233 (7%)

Query: 43  AYGEKILGSSSEYVQSNISRYFSDPQ--YYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE 100
            YG+ I     EYV+ N SR+ S  +  YYF V+  YV NKLK++LFP+LHR  W RI +
Sbjct: 13  QYGQSIANQGKEYVEKNFSRWVSVSKLKYYFAVDTAYVGNKLKLLLFPYLHR-DWERIYD 71

Query: 101 PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGW 160
               R S  PP YD+NAPDLYIP MAF TY++LAG  LGLQG+F+PE L       L   
Sbjct: 72  ----RESPLPPRYDVNAPDLYIPTMAFITYILLAGLLLGLQGRFSPELLGLQASSALAWV 127

Query: 161 FMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAVLGRIVF-SYSYYFLILWMCM 218
           F++ + LK+ L  L  S     LD++AY+GY F GL LAVL +++F  Y YY ++ + C+
Sbjct: 128 FLEVLALKLGLYLLNVSSSLSTLDLLAYSGYKFVGLILAVLTKLLFGPYGYYLVLAYTCL 187

Query: 219 CMGVFLVKTMKRVLFAE--------MRTHDSSRHHYLLIFIAFAQLPLFLWLG 263
             G FL++++K  L +         + +    +  Y L FIA  Q     WL 
Sbjct: 188 ATGFFLLRSLKTALLSAPAAAYGAPVISSQRKKRLYFLFFIAAVQPLFLYWLS 240

YIF1 (Yip1 interacting factor) is an integral membrane protein that is required for membrane fusion of ER derived vesicles. It also plays a role in the biogenesis of ER derived COPII transport vesicles. Length = 240

>gnl|CDD|227524 COG5197, COG5197, Predicted membrane protein [Function unknown]

 Score =  126 bits (317), Expect = 8e-35
 Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 18/230 (7%)

Query: 45  GEKILGSSSEYVQSNISRYFSDPQY--YFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPV 102
           G+       EYV        S  Q   YFQV+++YV NKLK++LFPFL++ +W RI +  
Sbjct: 59  GKDAFNQFQEYVNKATGNAASSQQISTYFQVSNRYVINKLKLILFPFLNK-NWQRIGDSE 117

Query: 103 GGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFM 162
           G    + PP  D+N+PD+Y+P M F TY++L     GL+G F PE L +     L    +
Sbjct: 118 G----FLPPRDDVNSPDMYMPIMGFVTYILLWNTQQGLKGSFNPEDLGYKLSSTLAFVCV 173

Query: 163 QFMLLKVTLLSLGSGEAP-LLDVVAYAGYTFTGLCLAVLGRIV-FSYSYYFLILWMCMCM 220
             ++ ++ L  L   + P  LD++AY+GY F  L LA L + V   +    LI ++ +  
Sbjct: 174 DLLITRLGLYLLIDSKIPSFLDLLAYSGYKFVPLILAQLLKNVTMPFVLNILIFYLYIAF 233

Query: 221 GVFLVKTMKRVLF--------AEMRTHDSSRHHYLLIFIAFAQLPLFLWL 262
           GVFL++++K  +         A +      R +Y L  I   Q  + +WL
Sbjct: 234 GVFLLRSLKFNVLSRSGAEIHASISKSTRKRRNYFLFVIFIWQN-VLMWL 282

Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	271
KOG3094	284	consensus Predicted membrane protein [Function unk	100.0
PF03878	240	YIF1: YIF1; InterPro: IPR005578 This family includ	100.0
COG5197	284	Predicted membrane protein [Function unknown]	100.0
KOG3114	290	consensus Uncharacterized conserved protein [Funct	98.81
PF04893	172	Yip1: Yip1 domain; InterPro: IPR006977 This entry	95.42
COG5080	227	YIP1 Rab GTPase interacting factor, Golgi membrane	95.22
KOG3103	249	consensus Rab GTPase interacting factor, Golgi mem	94.65
KOG2946	234	consensus Uncharacterized conserved protein [Funct	91.96

>KOG3094 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=7.5e-84  Score=584.58  Aligned_cols=257  Identities=49%  Similarity=0.887  Sum_probs=241.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCccccccchhhhchHH---------hhHHHHHhhhhHHHHhhhhhhcc--CCcc
Q 024178            1 MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLG---------AYGEKILGSSSEYVQSNISRYFS--DPQY   69 (271)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~yG~~~~~~g~~yvq~n~~~y~~--~lky   69 (271)
                      ++++.+++  +++++|.-+|.+.|+||+.+|.|++..+.+++         +|||+++++|+||||+|++||++  ++||
T Consensus        11 ~~~~~~p~--a~~p~p~~dp~~Gp~g~~~~G~g~~~~~~~l~g~~~a~~~~~~Gk~~~~~~~E~v~~~~~k~~~~~~l~y   88 (284)
T KOG3094|consen   11 DPNHAGPA--APMPVPQFDPTPGPFGNPVTGAGAGFPVQGLGGSPMADMAMAYGKKIAGQGKEYVEKNLGKYVSVPKLKY   88 (284)
T ss_pred             CCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCcCcccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceE
Confidence            34556666  67777776788889999999999999999988         99999999999999999999998  7899


Q ss_pred             eeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhH
Q 024178           70 YFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEAL  149 (271)
Q Consensus        70 YF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~L  149 (271)
                      ||+|||+||.|||++|+|||+||+ |+|+.|.    ++++|||||+||||||||+|||+||||++|+.+|++|+|+||.|
T Consensus        89 YF~Vdn~YV~~KL~lilfPf~hk~-W~~~~~~----~~~~PPr~DvNaPDLYiP~MafiTYIll~gl~lGlqg~FsPE~L  163 (284)
T KOG3094|consen   89 YFAVDNAYVGKKLKLILFPFLHKD-WTRIYER----ESPLPPRYDVNAPDLYIPLMAFITYILLAGLLLGLQGRFSPEAL  163 (284)
T ss_pred             EEEechHHHhhhheEEEeeecCcc-hhhhhcc----cCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhhccCCCHHHH
Confidence            999999999999999999999995 9999883    46999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCcceeeeecccchhhHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHH
Q 024178          150 NWLFIKGLFGWFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAVLGRIVF-SYSYYFLILWMCMCMGVFLVKT  227 (271)
Q Consensus       150 g~~~s~~l~~~~lEv~ilk~~~Y~l~-~~~~~~lDlvAysGYKyv~i~~~ll~~l~~-~~~yy~~~ly~~~a~~~Fl~Rt  227 (271)
                      |+.+|+++++|++|++++|+++|+++ +++.+++|++||+|||||++|++.+.++++ .+.||+++.|+++|.++||+||
T Consensus       164 g~~~s~al~~v~le~l~l~l~lY~l~vs~~ls~ldllAysGYKfv~liL~~L~k~~~~~~~yyi~~~yt~~a~gvFLlRS  243 (284)
T KOG3094|consen  164 GILASKALAWVILEVLLLKLGLYLLNVSSSLSTLDLLAYSGYKFVGLILAQLTKLLFGPYGYYIALAYTYLAFGVFLLRS  243 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHheecccCCcchhHhhhhcccchHHHHHHHHhhheecchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 589999999999999999999999999986 5999999999999999999999


Q ss_pred             HHHHhhhcccccC----CccceeehhHHHHHHHHHHHHhhh
Q 024178          228 MKRVLFAEMRTHD----SSRHHYLLIFIAFAQLPLFLWLGN  264 (271)
Q Consensus       228 Lk~~ll~e~~~~~----~~r~~yfl~~ia~~Q~~l~~wL~~  264 (271)
                      ||+.+++|.+..+    ++||+||||++|++|+++++||++
T Consensus       244 lK~~ll~~~~~~~~v~q~~r~~YfLf~ia~~Q~~~l~wLs~  284 (284)
T KOG3094|consen  244 LKRALLAESSMADPVPQSSRRLYFLFFIAAVQFLILYWLSN  284 (284)
T ss_pred             HHHHHcCCccccCccchhhhhHHHHHHHHHHHHHHHHHhcC
Confidence            9999999988776    899999999999999999999974

>PF03878 YIF1: YIF1; InterPro: IPR005578 This family includes a number of eukaryotic proteins

Probab=100.00  E-value=3.7e-79  Score=554.39  Aligned_cols=217  Identities=45%  Similarity=0.900  Sum_probs=205.1

Q ss_pred             HhhHHHHHhhhhHHHHhhhhhhcc--CCcceeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCC
Q 024178           42 GAYGEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPD  119 (271)
Q Consensus        42 ~~yG~~~~~~g~~yvq~n~~~y~~--~lkyYF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPD  119 (271)
                      +||||+++++|+||||||++||++  ++||||||||+||+|||++|+|||+|| +|+|+.|    +++++|||+|+||||
T Consensus        12 ~q~G~~~~~~g~~~v~~~~~~~~~~~~lk~YF~V~n~YV~~KL~lllfPf~~k-~W~r~~~----~~~~~~Pr~DvNAPD   86 (240)
T PF03878_consen   12 MQYGQSALNQGQEYVQKNLGRYVSVSSLKYYFAVDNSYVLKKLKLLLFPFLHK-DWSRKYE----QESYLPPREDVNAPD   86 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcccceeeEECCHHHHHHHHHHeecccccC-Ccccccc----ccCCCCchhhccCcc
Confidence            499999999999999999999997  799999999999999999999999999 5999887    346999999999999


Q ss_pred             cccchhHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCcceeeeecccchhhHHHH
Q 024178          120 LYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLA  198 (271)
Q Consensus       120 LYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~l~-~~~~~~lDlvAysGYKyv~i~~~  198 (271)
                      ||||+||++||||++|+.+|++|+||||.||.++|+|+++|++|++++|+++|+++ +++.+++|++||+|||||++|++
T Consensus        87 LYIPlMa~vTYiLl~g~~~G~~g~F~Pe~Lg~~~s~al~~~~lEv~i~k~~~y~l~~~~~~~~lDlvay~GYKfv~ii~~  166 (240)
T PF03878_consen   87 LYIPLMAFVTYILLSGLILGLQGRFSPELLGIQASSALVWWFLEVLIIKLGLYLLNISSSLPILDLVAYSGYKFVGIILT  166 (240)
T ss_pred             cccchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHhhcchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999 58999999999999999999999


Q ss_pred             HHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-cc-------CCccceeehhHHHHHHHHHHHHhh
Q 024178          199 VLGRIVF-SYSYYFLILWMCMCMGVFLVKTMKRVLFAEMR-TH-------DSSRHHYLLIFIAFAQLPLFLWLG  263 (271)
Q Consensus       199 ll~~l~~-~~~yy~~~ly~~~a~~~Fl~RtLk~~ll~e~~-~~-------~~~r~~yfl~~ia~~Q~~l~~wL~  263 (271)
                      ++++++. +++||++++|+++|+++|++||||+.++++.+ ++       +++||+||++++|++|+|++||||
T Consensus       167 ~l~~~l~~~~~yy~~~ly~~~a~~~Fl~RsLk~~i~~~~~~~~~~~~~~~~~~~r~yfL~~~a~~Q~~l~~wLt  240 (240)
T PF03878_consen  167 LLASLLFGSWVYYIALLYTSFANAFFLLRSLKRVILPSPSSSYGSVSSSSQRKRRNYFLFFIAIVQPPLMFWLT  240 (240)
T ss_pred             HHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeehhHHHHHHHHHHHHHHhhC
Confidence            9999885 69999999999999999999999999996432 22       378999999999999999999996

It is an integral membrane protein, conserved in at least 1 copy in all sequenced eukaryotes. The gene name in Schizosaccharomyces pombe (Fission yeast) is hrf1+ for Heavy metal Resistance Factor 1.

>COG5197 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=3.3e-60  Score=423.26  Aligned_cols=215  Identities=34%  Similarity=0.605  Sum_probs=196.5

Q ss_pred             hhHHHHHhhhhHHHHhhhhhhcc--CCcceeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCc
Q 024178           43 AYGEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL  120 (271)
Q Consensus        43 ~yG~~~~~~g~~yvq~n~~~y~~--~lkyYF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDL  120 (271)
                      +-||.++++++|||+|++++..+  .+++||+|||+||.+||++|+|||++| +|+|..+.    +.|+|||||+|+|||
T Consensus        57 ~iGk~a~n~~qEyv~k~~g~~~s~~~~~tYF~V~n~yVi~KL~LIlfPf~nk-~W~r~gd~----eg~~pp~~d~nsPdm  131 (284)
T COG5197          57 FIGKDAFNQFQEYVNKATGNAASSQQISTYFQVSNRYVINKLKLILFPFLNK-NWQRIGDS----EGFLPPRDDVNSPDM  131 (284)
T ss_pred             HHhHHHHHHHHHHHHHhhcccccccceeEEEEechHhHHhhhheEEeecccc-hhhhccCC----CCCCCchhhcCCccc
Confidence            47999999999999999999997  799999999999999999999999999 79996444    459999999999999


Q ss_pred             ccchhHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCcceeeeecccchhhHHHHH
Q 024178          121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAV  199 (271)
Q Consensus       121 YIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~l~-~~~~~~lDlvAysGYKyv~i~~~l  199 (271)
                      |+|+|+|+||||+++..+|++|.|+||.||..+|++++..++|+++.|++||+++ +...+++|++||+|||||+++++-
T Consensus       132 Y~P~M~fvtyILl~~~~~GL~g~F~PE~lg~~~s~~~a~v~v~~l~trlg~Yll~~s~~~~~ldllaysGYKfV~liL~q  211 (284)
T COG5197         132 YMPIMGFVTYILLWNTQQGLKGSFNPEDLGYKLSSTLAFVCVDLLITRLGLYLLIDSKIPSFLDLLAYSGYKFVPLILAQ  211 (284)
T ss_pred             cchHHHHHHHHHHHHHHhhcccCCCHHHhhHHHHHHHHHHHHHHHHHHhceEEEeecccchhhhhhhhcccccHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999998 556779999999999999999988


Q ss_pred             HHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------ccCCccceeehhHHHHHHHHHHHHh
Q 024178          200 LGRIVF-SYSYYFLILWMCMCMGVFLVKTMKRVLFAEMR--------THDSSRHHYLLIFIAFAQLPLFLWL  262 (271)
Q Consensus       200 l~~l~~-~~~yy~~~ly~~~a~~~Fl~RtLk~~ll~e~~--------~~~~~r~~yfl~~ia~~Q~~l~~wL  262 (271)
                      +.+.+. .|.--+...|..+|.++||+||+|+.++++..        +++++||+||||++++.|..+||-|
T Consensus       212 L~k~~~Mp~v~~i~~~Ylyiaf~vFLlRSlK~~vl~~s~~~i~asis~~~r~rr~YfLF~i~i~Q~~~m~ll  283 (284)
T COG5197         212 LLKNVTMPFVLNILIFYLYIAFGVFLLRSLKFNVLSRSGAEIHASISKSTRKRRNYFLFVIFIWQNVLMWLL  283 (284)
T ss_pred             HhhhccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccceeeeeechhhhhheeeeeehHHHHHHHHHHhh
Confidence            888774 66666777999999999999999999999763        2358999999999999998776655

>KOG3114 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.81  E-value=5.9e-08  Score=90.94  Aligned_cols=153  Identities=22%  Similarity=0.263  Sum_probs=94.6

Q ss_pred             hhcc--CCcceeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHh-
Q 024178           62 RYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTL-  138 (271)
Q Consensus        62 ~y~~--~lkyYF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~-  138 (271)
                      +|+.  -.|.|||||++-|++||+-.++|  ++ + .  .|+.            -+.||||-|+|...|-|-+.+... 
T Consensus        73 ~~~ti~yyq~fFdVDt~qV~~Rl~~SliP--~~-~-~--~~~~------------~~~PDLYGPfWI~~TlVf~l~~~g~  134 (290)
T KOG3114|consen   73 SFFTIEYYQPFFDVDTAQVRKRLKESLIP--RN-Y-V--RDQI------------QDNPDLYGPFWITATLVFALAISGN  134 (290)
T ss_pred             ccccHHhhccccCCCHHHHHHHHHHhcCC--cc-c-c--cccc------------CCCccccccHHHHHHHHHHHHHccc
Confidence            3544  67999999999999999999999  22 1 1  1222            168999999999999887766543 


Q ss_pred             --------hhcC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHh-----c---cCCCCCcceeeeecccchhhHHHHHHH
Q 024178          139 --------GLQG-KFTPEALNWLFIKGLFGWFMQFMLLKVTLLS-----L---GSGEAPLLDVVAYAGYTFTGLCLAVLG  201 (271)
Q Consensus       139 --------G~~g-~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~-----l---~~~~~~~lDlvAysGYKyv~i~~~ll~  201 (271)
                              +.+| +..++ ++. .+++..+...=+.++.+.++-     =   +..-..++|+++.-||.-...+-+++.
T Consensus       135 ~~~~i~~~t~~g~~~g~~-f~~-v~saa~~iy~Y~~ivp~~l~~iL~~~~~~~~~~~~~l~~~~~iygysl~i~ip~~vl  212 (290)
T KOG3114|consen  135 LATFIRNGTLKGTAYGYD-FGL-VTSAATLIYGYLTIVPLALWGILSWNGYSLLLHCYVLLELVCIYGYSLFIFIPLLVL  212 (290)
T ss_pred             HHHHHHhccccceeeecc-cch-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccceehhhHHHHHhhHHHHHHHHHHH
Confidence                    2233 22222 112 222222222223333333332     1   122356799999999987776666666


Q ss_pred             HHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024178          202 RIVF-SYSYYFLILWMCMCMGVFLVKTMKRVLFA  234 (271)
Q Consensus       202 ~l~~-~~~yy~~~ly~~~a~~~Fl~RtLk~~ll~  234 (271)
                      .++. ++.=|+...-.....+.||.+++.-.+..
T Consensus       213 ~iv~~~~~~wvl~~~~~~~S~~~L~~~l~p~~~~  246 (290)
T KOG3114|consen  213 WIVPSSMVQWVLVGTALGLSGTFLAGTLWPAVRL  246 (290)
T ss_pred             HhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            6664 55555555555566678888888866543

>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain

Probab=95.42  E-value=0.12  Score=42.59  Aligned_cols=90  Identities=20%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             CCCCCCcccchhHHHHHHHHHHHHhhhcCCCChh---------hHHHH-HHHH---HHHHHHHHHHHHHHHHhccCCCCC
Q 024178          114 DINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE---------ALNWL-FIKG---LFGWFMQFMLLKVTLLSLGSGEAP  180 (271)
Q Consensus       114 DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE---------~Lg~~-~s~~---l~~~~lEv~ilk~~~Y~l~~~~~~  180 (271)
                      +.+.+|+|.++++.++.+..........+.+.++         ..-.. ....   ++.+++=..+++..+.+++ ++.+
T Consensus        18 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~g-g~~~   96 (172)
T PF04893_consen   18 ISKSWWLPLLLVILLTLVFGLLSSLNIPWYVDSGGSAYMFSFGSLLGSIIGGFIIILIGWFILALILHLIAKLFG-GKGS   96 (172)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCC
Confidence            4478999999999999998877775444444433         11111 1111   1333344444455555555 7888


Q ss_pred             cceeeeecccchhhHHHHHHHHHh
Q 024178          181 LLDVVAYAGYTFTGLCLAVLGRIV  204 (271)
Q Consensus       181 ~lDlvAysGYKyv~i~~~ll~~l~  204 (271)
                      +-|..+..||..++.++..+...+
T Consensus        97 ~~~~~~~~~ya~~P~~~~~~~~~~  120 (172)
T PF04893_consen   97 FKETFSVVGYALIPLLLGSLISII  120 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988776554

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane

>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

Probab=95.22  E-value=0.17  Score=46.17  Aligned_cols=120  Identities=21%  Similarity=0.389  Sum_probs=77.9

Q ss_pred             HHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHH
Q 024178           78 VRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGL  157 (271)
Q Consensus        78 V~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~s~~l  157 (271)
                      .++|...++-|+.||..                  +-.+.-||--|+.    |++|-++.+-+++|   -..|...    
T Consensus        72 i~~ks~~vl~p~~~~~~------------------~i~~d~DL~gPli----F~lL~sLfLsla~~---shFgyiy----  122 (227)
T COG5080          72 IKSKSDDVLGPFDNKAF------------------DILADCDLWGPLI----FILLYSLFLSLAGK---SHFGYIY----  122 (227)
T ss_pred             cccccceeeecccccch------------------hhhhcccccccHH----HHHHHHHHHHhccc---ceeehhh----
Confidence            56899999999987730                  1135578888865    66677777777776   2222222    


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCcceeeeecccchhhHHHHHHHHHhh------hhHHHH-HHHHHHHHHHHHHHH
Q 024178          158 FGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVF------SYSYYF-LILWMCMCMGVFLVK  226 (271)
Q Consensus       158 ~~~~lEv~ilk~~~Y~l~~~~~~~lDlvAysGYKyv~i~~~ll~~l~~------~~~yy~-~~ly~~~a~~~Fl~R  226 (271)
                      ++..+-.+.+.+.+-+++..+.+++.-++..||.+.++++.-+.+++.      .+..+. ..+|+..|.+.++-+
T Consensus       123 ~islfg~lsl~~~lrLl~~~ni~f~~~~SIlGYs~lPlv~~slv~~i~~~i~i~~~vv~~l~~~Ws~~AaS~v~~~  198 (227)
T COG5080         123 GISLFGTLSLHLLLRLLGHKNISFFSTISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLIWSTYAASGVLKS  198 (227)
T ss_pred             HHHHHHHHHHHHHHHHhccCceeeeehhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222333344455556667778999999999999999998887766542      122333 367777776655443

>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.65  E-value=0.12  Score=47.87  Aligned_cols=126  Identities=20%  Similarity=0.260  Sum_probs=84.9

Q ss_pred             eeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhHHH
Q 024178           72 QVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNW  151 (271)
Q Consensus        72 ~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~  151 (271)
                      .+|-.-+++|-+.+|-|+++.++                  +-.+.+||=-|+.    ++|+.|..+=++||-|=-    
T Consensus        89 gInf~hI~~KT~~VLnP~r~~~q------------------~i~~d~DlaGPlv----f~L~f~~flLl~gKi~Fg----  142 (249)
T KOG3103|consen   89 GINFDHIKQKTRAVLNPFRSADQ------------------SIMKDTDLAGPLV----FCLLFGLFLLLAGKIHFG----  142 (249)
T ss_pred             CCCHHHHHHHHhheecccccCce------------------EEecCcccccchH----HHHHHHHHHHhcCceEEE----
Confidence            57778899999999999988741                  1236789988965    455666666667764411    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCcceeeeecccchhhHHHHHHHHHhh---hhH-H---HHHHHHHHHHHHHHH
Q 024178          152 LFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVF---SYS-Y---YFLILWMCMCMGVFL  224 (271)
Q Consensus       152 ~~s~~l~~~~lEv~ilk~~~Y~l~~~~~~~lDlvAysGYKyv~i~~~ll~~l~~---~~~-y---y~~~ly~~~a~~~Fl  224 (271)
                         ....++++-.+.+-..+-+++.+++++-...+..||.+.++++.-..+++.   +.+ |   -+..+|+..|.+-++
T Consensus       143 ---yIygi~~~gsl~iy~L~nlm~~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~~~~v~W~t~aaS~lf  219 (249)
T KOG3103|consen  143 ---YIYGISLLGSLSIYFLLNLMSNKNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILSALFVLWCTYAASKLF  219 (249)
T ss_pred             ---EEeeeHHHHHHHHHHHHHHHhhcCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence               122344444444444445555688999999999999999999887776663   222 2   245577777766555


Q ss_pred             HH
Q 024178          225 VK  226 (271)
Q Consensus       225 ~R  226 (271)
                      ++
T Consensus       220 v~  221 (249)
T KOG3103|consen  220 VS  221 (249)
T ss_pred             HH
Confidence            55

>KOG2946 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.96  E-value=6  Score=36.55  Aligned_cols=103  Identities=22%  Similarity=0.324  Sum_probs=65.5

Q ss_pred             ChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhHHHHH
Q 024178           74 NDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLF  153 (271)
Q Consensus        74 dnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~  153 (271)
                      |-.-|..|++.+++|--..       |+.+.     -    +..=||.-|+--.+-    .|+++-..+.++-.   ..+
T Consensus        70 D~~~I~~kl~~Vl~P~py~-------~dk~~-----~----lRDwDlWGPl~~~~~----la~iL~~s~~~~~~---~vF  126 (234)
T KOG2946|consen   70 DLRAIGSKLKHVLYPHPYF-------EDKGQ-----L----LRDWDLWGPLFFCVF----LALILSLSGSVKSA---SVF  126 (234)
T ss_pred             HHHHHHhceEEEEccCCCc-------ccccc-----e----eecccccchhHHHHH----HHHHHHhhcCcccc---hhH
Confidence            4556788999999997433       11110     0    122388888753332    23333333333322   446


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCcceeeeecccchhhHHHHHH
Q 024178          154 IKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVL  200 (271)
Q Consensus       154 s~~l~~~~lEv~ilk~~~Y~l~~~~~~~lDlvAysGYKyv~i~~~ll  200 (271)
                      ++.++++.+-.+++.+-.-+++ +++++..-++..||--.+..++.+
T Consensus       127 s~vf~i~wfG~~vvtln~kLLG-gnIs~fQsl~IlGYCLfPl~v~al  172 (234)
T KOG2946|consen  127 AVVFAILWFGAVVVTLNIKLLG-GNISFFQSLCILGYCLFPLVVAAL  172 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-CceeEEeehhhhhhcccHHHHHHH
Confidence            6667777766666666667777 789999999999999999887753

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00